VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 219 352 1.3E-31 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 SUPERFAMILY SSF52467 185 368 2.18E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Gene3D G3DSA:3.40.50.970 4 201 1.2E-33 T 14-10-2018 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 SUPERFAMILY SSF52518 416 624 4.29E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 196 1.3E-34 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Gene3D G3DSA:3.40.50.970 413 611 1.8E-47 T 14-10-2018 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 439 598 7.4E-40 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 475 494 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 Gene3D G3DSA:3.40.50.1220 212 393 2.2E-33 T 14-10-2018 VEJY3_08625 c3cea7103196f0ae14873a477e2b0398 643 SUPERFAMILY SSF52518 2 209 5.68E-35 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_08070 bae278b8793320ee9664098f152c228c 323 Pfam PF03466 LysR substrate binding domain 88 294 6.1E-29 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_08070 bae278b8793320ee9664098f152c228c 323 Gene3D G3DSA:3.40.190.290 92 296 1.3E-44 T 14-10-2018 VEJY3_08070 bae278b8793320ee9664098f152c228c 323 SUPERFAMILY SSF53850 89 301 1.86E-32 T 14-10-2018 VEJY3_08070 bae278b8793320ee9664098f152c228c 323 Gene3D G3DSA:1.10.10.10 2 91 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08070 bae278b8793320ee9664098f152c228c 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_08070 bae278b8793320ee9664098f152c228c 323 SUPERFAMILY SSF46785 3 87 4.08E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16456 b934c11dd4175eb232e3a611994e2b22 132 Pfam PF02566 OsmC-like protein 29 127 1.2E-16 T 14-10-2018 IPR003718 OsmC/Ohr family VEJY3_16456 b934c11dd4175eb232e3a611994e2b22 132 Gene3D G3DSA:3.30.300.20 35 132 2.4E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_16456 b934c11dd4175eb232e3a611994e2b22 132 SUPERFAMILY SSF82784 1 131 8.24E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VEJY3_16456 b934c11dd4175eb232e3a611994e2b22 132 Gene3D G3DSA:2.20.25.10 1 34 2.3E-20 T 14-10-2018 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 Gene3D G3DSA:3.40.30.60 365 508 2.4E-53 T 14-10-2018 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 Pfam PF00771 FHIPEP family 32 689 5.6E-270 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PIRSF PIRSF005419 10 699 1.1E-252 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 Gene3D G3DSA:1.10.490.80 600 697 1.6E-14 T 14-10-2018 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEJY3_11510 2343885256b6561e50ee9e8458f8a3ab 699 Gene3D G3DSA:1.10.8.540 509 596 2.8E-23 T 14-10-2018 VEJY3_19591 aab7eb34302236035acd7d5f2d987fb2 443 PIRSF PIRSF004539 1 441 1.1E-183 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEJY3_19591 aab7eb34302236035acd7d5f2d987fb2 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 2.0E-148 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEJY3_03550 f9140cec4fc6093bfa5f73e01061f32d 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEJY3_03550 f9140cec4fc6093bfa5f73e01061f32d 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEJY3_03550 f9140cec4fc6093bfa5f73e01061f32d 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 1.6E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEJY3_21441 76a1aad92556b73559eb9293b2f33bb7 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 330 3.2E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_21441 76a1aad92556b73559eb9293b2f33bb7 332 Gene3D G3DSA:1.10.3720.10 94 325 9.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_21441 76a1aad92556b73559eb9293b2f33bb7 332 SUPERFAMILY SSF161098 103 313 1.31E-20 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 Pfam PF00889 Elongation factor TS 71 261 2.7E-62 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 77.203 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 SUPERFAMILY SSF54713 142 280 6.15E-46 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 Gene3D G3DSA:1.10.286.20 185 224 3.1E-22 T 14-10-2018 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 14-10-2018 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 Gene3D G3DSA:3.30.479.20 57 139 5.8E-27 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEJY3_12070 8a144d069bd560179c2bde2abddef31b 281 SUPERFAMILY SSF54713 56 138 1.11E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Pfam PF14842 FliG N-terminal domain 24 124 1.4E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PIRSF PIRSF003161 18 351 6.1E-114 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 5.8E-58 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Pfam PF01706 FliG C-terminal domain 237 343 6.1E-40 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 SUPERFAMILY SSF48029 26 135 1.83E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Gene3D G3DSA:1.10.220.30 19 103 3.0E-17 T 14-10-2018 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 14-10-2018 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 3.6E-96 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 Gene3D G3DSA:1.10.220.30 214 351 1.8E-42 T 14-10-2018 VEJY3_11575 e21186e1c96fe1857705056f2d355841 351 SUPERFAMILY SSF48029 133 344 2.62E-66 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Gene3D G3DSA:3.40.50.10070 23 184 1.6E-49 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 SUPERFAMILY SSF69304 174 448 9.02E-58 T 14-10-2018 VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 2.7E-170 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Gene3D G3DSA:2.120.10.30 185 450 4.9E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.2E-35 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 4.3E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 2.8E-14 T 14-10-2018 IPR011659 WD40-like Beta Propeller VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 4.0E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 SUPERFAMILY SSF52964 29 181 5.49E-41 T 14-10-2018 VEJY3_04935 23b05a5997da0eace1a9d06570f37d1a 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 52.153 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VEJY3_10875 2b09c068a8b4e02fe072651083f25f00 85 SUPERFAMILY SSF54285 1 85 7.1E-19 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEJY3_10875 2b09c068a8b4e02fe072651083f25f00 85 Pfam PF02597 ThiS family 4 85 3.7E-22 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VEJY3_10875 2b09c068a8b4e02fe072651083f25f00 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 9.5E-21 T 14-10-2018 VEJY3_10875 2b09c068a8b4e02fe072651083f25f00 85 Gene3D G3DSA:3.10.20.30 1 85 1.4E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_03875 279211822ff9116bec64372562fca5d9 261 Pfam PF00950 ABC 3 transport family 1 257 7.0E-74 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VEJY3_03875 279211822ff9116bec64372562fca5d9 261 SUPERFAMILY SSF81345 2 253 1.05E-37 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_03875 279211822ff9116bec64372562fca5d9 261 Gene3D G3DSA:1.10.3470.10 29 253 1.1E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.521 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 PIRSF PIRSF000505 1 426 2.8E-155 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 7.8E-158 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 Gene3D G3DSA:3.65.10.10 242 419 2.3E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 Gene3D G3DSA:3.65.10.10 20 224 2.3E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEJY3_04740 cc599529982163f2cb7fd0150c226185 426 SUPERFAMILY SSF55205 1 424 9.48E-146 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VEJY3_12470 f37e68f7325beabed7efd107b0f591a7 319 Pfam PF00482 Type II secretion system (T2SS), protein F 173 300 1.4E-24 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_12470 f37e68f7325beabed7efd107b0f591a7 319 Gene3D G3DSA:1.20.81.30 158 279 1.4E-7 T 14-10-2018 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 Pfam PF00206 Lyase 14 313 5.6E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 Gene3D G3DSA:1.20.200.10 118 447 3.1E-158 T 14-10-2018 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 SUPERFAMILY SSF48557 4 448 1.88E-108 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 3.8E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 Gene3D G3DSA:1.10.275.10 1 117 1.9E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 Gene3D G3DSA:1.10.40.30 383 446 3.1E-158 T 14-10-2018 VEJY3_05510 28412eed0280e7397ad1f3615b647c35 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 7.4E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VEJY3_22966 e7c9f78decb13341dc83c074fc437c3d 339 Gene3D G3DSA:3.40.50.300 25 192 1.8E-12 T 14-10-2018 VEJY3_22966 e7c9f78decb13341dc83c074fc437c3d 339 SUPERFAMILY SSF52540 21 273 1.6E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22966 e7c9f78decb13341dc83c074fc437c3d 339 Pfam PF05621 Bacterial TniB protein 18 270 2.4E-21 T 14-10-2018 IPR008868 Bacterial TniB VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 Pfam PF13519 von Willebrand factor type A domain 88 193 4.5E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 Pfam PF07719 Tetratricopeptide repeat 398 429 5.4E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 SMART SM00327 84 284 2.3E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 Gene3D G3DSA:3.40.50.410 85 285 4.3E-33 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 SMART SM00028 397 430 0.0028 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 SUPERFAMILY SSF53300 87 276 2.4E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 Gene3D G3DSA:1.25.40.10 338 458 2.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23311 cd58bc9422508d6ce99d3eee7a07b144 590 SUPERFAMILY SSF48452 349 446 4.49E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 SMART SM00062 36 256 3.1E-40 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 Gene3D G3DSA:3.40.190.10 31 248 1.3E-54 T 14-10-2018 VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 SUPERFAMILY SSF53850 8 255 1.15E-53 T 14-10-2018 VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 SMART SM00079 36 255 0.0022 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 2.1E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19301 a8a6ed746bd3885593e786c5fa366718 263 Gene3D G3DSA:3.40.190.10 123 214 1.3E-54 T 14-10-2018 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 Gene3D G3DSA:3.40.640.10 54 313 1.6E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.8E-150 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 Gene3D G3DSA:3.90.1150.10 5 405 1.6E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 PIRSF PIRSF000521 174 412 1.8E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 PIRSF PIRSF000521 2 126 2.6E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 PIRSF PIRSF000521 119 154 0.77 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 Pfam PF00202 Aminotransferase class-III 15 409 6.9E-81 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.3E-205 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VEJY3_07985 1184c5cc70635c0903375d372f8037eb 421 SUPERFAMILY SSF53383 7 410 3.89E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_12055 d1fdc75618ba2b435117bc2c0abb9d51 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.608 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VEJY3_12055 d1fdc75618ba2b435117bc2c0abb9d51 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 5.8E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VEJY3_12055 d1fdc75618ba2b435117bc2c0abb9d51 251 Gene3D G3DSA:3.40.1180.10 1 239 2.1E-94 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VEJY3_12055 d1fdc75618ba2b435117bc2c0abb9d51 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VEJY3_12055 d1fdc75618ba2b435117bc2c0abb9d51 251 SUPERFAMILY SSF64005 9 234 4.84E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VEJY3_07665 290b3be3064041d8e5d5d095a0f034fc 165 SUPERFAMILY SSF54637 15 156 1.59E-15 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_07665 290b3be3064041d8e5d5d095a0f034fc 165 Pfam PF14539 Domain of unknown function (DUF4442) 16 106 9.1E-9 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VEJY3_07665 290b3be3064041d8e5d5d095a0f034fc 165 Gene3D G3DSA:3.10.129.10 6 147 2.5E-24 T 14-10-2018 VEJY3_23531 4890440d1be8694f3825b5adf6f85b10 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEJY3_23531 4890440d1be8694f3825b5adf6f85b10 173 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEJY3_23531 4890440d1be8694f3825b5adf6f85b10 173 Gene3D G3DSA:2.60.40.200 23 173 1.2E-46 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEJY3_23531 4890440d1be8694f3825b5adf6f85b10 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 172 3.3E-30 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEJY3_23531 4890440d1be8694f3825b5adf6f85b10 173 SUPERFAMILY SSF49329 27 173 1.7E-49 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEJY3_09935 a8281bb7443efc82eaa434e968983b0b 195 SUPERFAMILY SSF109604 4 182 5.1E-43 T 14-10-2018 VEJY3_09935 a8281bb7443efc82eaa434e968983b0b 195 Pfam PF13023 HD domain 15 172 9.1E-52 T 14-10-2018 IPR006674 HD domain VEJY3_09935 a8281bb7443efc82eaa434e968983b0b 195 Gene3D G3DSA:1.10.3210.10 1 195 8.2E-52 T 14-10-2018 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF82697 1 150 9.42E-51 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:3.90.650.10 808 982 1.9E-31 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:1.10.8.750 153 213 6.4E-28 T 14-10-2018 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 2.2E-106 T 14-10-2018 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 967 9.6E-14 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 3.0E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:3.90.650.10 420 606 2.4E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF55326 619 816 1.26E-68 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF56042 432 615 3.14E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.307 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF52317 1037 1295 1.26E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SMART SM01211 1041 1296 3.1E-158 T 14-10-2018 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF56042 823 1035 1.79E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF109736 155 220 1.83E-21 T 14-10-2018 VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:3.30.1330.10 615 807 4.6E-26 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:3.40.50.880 983 1297 4.6E-141 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_03050 305880cfd314d4f631857e176882de74 1297 SUPERFAMILY SSF55326 221 428 9.42E-66 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_03050 305880cfd314d4f631857e176882de74 1297 Gene3D G3DSA:3.30.1330.10 214 419 1.8E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Pfam PF10531 SLBB domain 296 344 2.7E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 14 444 1.3E-149 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 SUPERFAMILY SSF142019 94 304 1.44E-56 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 112 8.5E-21 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Gene3D G3DSA:1.10.1060.10 365 443 2.8E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 138 284 7.5E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Pfam PF12838 4Fe-4S dicluster domain 377 429 7.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Gene3D G3DSA:3.40.50.11540 143 289 9.6E-16 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 525 134.245 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 SUPERFAMILY SSF46548 336 446 3.14E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_18886 f4c3e7be31a3625bfad855103e2f12a5 525 Gene3D G3DSA:3.10.20.600 293 357 1.4E-6 T 14-10-2018 VEJY3_19891 8ca665df1945a6309ebdd4692c4f25ed 311 SMART SM00797 27 308 4.2E-135 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VEJY3_19891 8ca665df1945a6309ebdd4692c4f25ed 311 Gene3D G3DSA:2.40.100.10 182 309 3.5E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_19891 8ca665df1945a6309ebdd4692c4f25ed 311 SUPERFAMILY SSF50891 185 292 1.48E-10 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_19891 8ca665df1945a6309ebdd4692c4f25ed 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 3.0E-82 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 3.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 Gene3D G3DSA:3.40.190.10 127 303 6.1E-11 T 14-10-2018 VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 SUPERFAMILY SSF53850 105 303 3.62E-20 T 14-10-2018 VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 SUPERFAMILY SSF46785 19 104 1.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 Pfam PF03466 LysR substrate binding domain 104 303 1.8E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 Gene3D G3DSA:3.40.190.10 181 273 6.1E-11 T 14-10-2018 VEJY3_23916 3501eb7e7806902297e26386d3fe33c9 304 Gene3D G3DSA:1.10.10.10 18 107 4.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 277 8.1E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 SUPERFAMILY SSF50621 261 389 2.09E-34 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 Gene3D G3DSA:3.20.20.10 42 279 1.5E-122 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 Gene3D G3DSA:2.40.37.10 30 381 1.5E-122 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 3.7E-17 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 SUPERFAMILY SSF51419 41 279 7.56E-61 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.5E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.5E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 1.5E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 1.5E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 1.5E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_23921 678dc3e24fde2aa0892917118ef4fae0 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 3.5E-19 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 SUPERFAMILY SSF160996 193 341 7.98E-42 T 14-10-2018 VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 Gene3D G3DSA:3.50.50.60 8 391 5.5E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 SUPERFAMILY SSF51905 1 397 2.04E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 5.5E-7 T 14-10-2018 VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-7 T 14-10-2018 VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 Pfam PF03486 HI0933-like protein 5 395 3.4E-155 T 14-10-2018 VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 Gene3D G3DSA:1.10.8.260 265 325 5.5E-128 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily VEJY3_00315 93ce92db542f648f2f29ea944d1d8005 397 Gene3D G3DSA:2.40.30.10 191 342 5.5E-128 T 14-10-2018 VEJY3_01535 cbf5db17c255de5afb8530ebb1cf1b58 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.191 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEJY3_01535 cbf5db17c255de5afb8530ebb1cf1b58 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 4.4E-52 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEJY3_01535 cbf5db17c255de5afb8530ebb1cf1b58 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEJY3_01535 cbf5db17c255de5afb8530ebb1cf1b58 176 SUPERFAMILY SSF50324 3 174 1.83E-65 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEJY3_01535 cbf5db17c255de5afb8530ebb1cf1b58 176 Gene3D G3DSA:3.90.80.10 1 175 3.1E-67 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 6.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 SUPERFAMILY SSF51621 6 877 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 Gene3D G3DSA:1.20.1440.90 273 387 2.9E-27 T 14-10-2018 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 4.4E-289 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_14115 cf73a76ccd882acf51df256efc6dd508 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.962 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEJY3_15340 780e19b084184366b2ad1e0c3c69845e 481 PIRSF PIRSF006247 1 481 8.1E-165 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEJY3_15340 780e19b084184366b2ad1e0c3c69845e 481 Pfam PF02386 Cation transport protein 53 475 1.2E-48 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 5.1E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.182 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 SUPERFAMILY SSF52141 4 222 7.85E-97 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 Gene3D G3DSA:3.40.470.10 1 224 4.1E-105 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 SMART SM00986 49 210 6.3E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_02255 cda1ff0bfb7beb4214b8b0f4dc488fb2 226 SMART SM00987 49 210 6.3E-40 T 14-10-2018 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 Gene3D G3DSA:3.30.300.30 497 624 1.3E-24 T 14-10-2018 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 Gene3D G3DSA:3.40.50.12780 33 494 7.7E-103 T 14-10-2018 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 Pfam PF00501 AMP-binding enzyme 66 501 6.9E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 8.3E-12 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 SUPERFAMILY SSF56801 3 615 1.01E-153 T 14-10-2018 VEJY3_07835 a0582941d4de612a7e36a5ff0eceed4b 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.2E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_16371 eead081404f6bc362959d67d566b9493 678 SUPERFAMILY SSF63829 327 642 1.18E-6 T 14-10-2018 VEJY3_16371 eead081404f6bc362959d67d566b9493 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 3.1E-151 T 14-10-2018 IPR008557 Protein of unknown function DUF839 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 PIRSF PIRSF001456 3 360 1.5E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 SUPERFAMILY SSF103263 4 353 1.7E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 Pfam PF01264 Chorismate synthase 10 345 1.3E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 Gene3D G3DSA:3.60.150.10 1 360 1.0E-159 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.615 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_11345 282876913a643717a1d5f3a0a12330d3 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 Gene3D G3DSA:3.30.70.920 55 137 1.4E-20 T 14-10-2018 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.1E-18 T 14-10-2018 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 SUPERFAMILY SSF54909 63 145 7.51E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 SUPERFAMILY SSF46785 1 60 1.83E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 SMART SM00344 1 110 1.6E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 Gene3D G3DSA:1.10.10.10 1 54 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_16076 995c989344af0e7d0a43e060b5b0aa44 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 8.2E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 SUPERFAMILY SSF46785 7 85 6.8E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 Gene3D G3DSA:3.40.190.10 182 280 2.3E-59 T 14-10-2018 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 SUPERFAMILY SSF53850 92 306 3.1E-49 T 14-10-2018 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 4.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 Gene3D G3DSA:3.40.190.10 94 304 2.3E-59 T 14-10-2018 VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 Gene3D G3DSA:1.10.10.10 2 89 2.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15215 dc817efc78de48f3592ffc12ef3f6408 313 Pfam PF03466 LysR substrate binding domain 97 308 6.0E-29 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 Pfam PF00072 Response regulator receiver domain 16 127 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 1.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 SMART SM00421 161 218 4.7E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 SUPERFAMILY SSF46894 157 221 1.19E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 SUPERFAMILY SSF52172 14 143 1.21E-31 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 SMART SM00448 14 127 3.2E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 Gene3D G3DSA:3.40.50.12740 15 222 3.3E-62 T 14-10-2018 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18661 d8619957e5de79a03ee365c4368a1f2c 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 Gene3D G3DSA:3.30.420.40 13 302 2.6E-90 T 14-10-2018 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 SUPERFAMILY SSF109604 312 498 6.28E-47 T 14-10-2018 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 4.8E-85 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 2.2E-100 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 Gene3D G3DSA:3.30.420.150 116 294 2.6E-90 T 14-10-2018 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 PIRSF PIRSF001267 2 501 5.3E-201 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 SUPERFAMILY SSF53067 136 308 6.78E-48 T 14-10-2018 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 Gene3D G3DSA:1.10.3210.10 310 501 1.0E-56 T 14-10-2018 VEJY3_02615 fca59b4488d793713d5ae950d3965356 501 SUPERFAMILY SSF53067 12 131 1.51E-35 T 14-10-2018 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 SMART SM00862 137 215 1.0E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 Gene3D G3DSA:1.10.10.10 118 220 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 SUPERFAMILY SSF52172 2 130 1.99E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 SUPERFAMILY SSF46894 141 215 1.79E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 214 1.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 SMART SM00448 2 112 2.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 Gene3D G3DSA:3.40.50.2300 1 117 5.6E-34 T 14-10-2018 VEJY3_16271 2bfebf880886a0cf2b66754f8ac85758 221 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_21521 4bdd10d0a14ebbf1a3183f5bea59cad2 222 Gene3D G3DSA:3.30.70.1520 58 138 2.7E-48 T 14-10-2018 VEJY3_21521 4bdd10d0a14ebbf1a3183f5bea59cad2 222 Gene3D G3DSA:3.30.1360.120 51 216 2.7E-48 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEJY3_21521 4bdd10d0a14ebbf1a3183f5bea59cad2 222 Pfam PF04268 Sarcosine oxidase, gamma subunit family 65 214 1.7E-36 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 VEJY3_21521 4bdd10d0a14ebbf1a3183f5bea59cad2 222 SUPERFAMILY SSF103025 96 219 5.49E-16 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Gene3D G3DSA:3.40.50.740 126 617 2.3E-132 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 SUPERFAMILY SSF50692 752 951 3.11E-38 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 3.0E-55 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 PIRSF PIRSF036643 781 950 1.4E-15 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 PIRSF PIRSF036643 640 682 240.0 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 PIRSF PIRSF036643 12 580 5.1E-114 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Gene3D G3DSA:3.40.228.10 195 394 2.3E-132 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.4E-20 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 SMART SM00926 61 115 3.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 SUPERFAMILY SSF53706 60 645 1.27E-200 T 14-10-2018 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_07230 0c34d33db53a4ce3b4c5596e41a694f8 951 Gene3D G3DSA:2.40.40.20 767 951 1.3E-47 T 14-10-2018 VEJY3_01675 337069fa76ef59d5ed998d712f131ba9 200 SUPERFAMILY SSF52016 1 196 3.53E-60 T 14-10-2018 VEJY3_01675 337069fa76ef59d5ed998d712f131ba9 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.355 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VEJY3_01675 337069fa76ef59d5ed998d712f131ba9 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.5E-99 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VEJY3_01675 337069fa76ef59d5ed998d712f131ba9 200 Gene3D G3DSA:3.20.19.10 1 180 2.3E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEJY3_01675 337069fa76ef59d5ed998d712f131ba9 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.7E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.714 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Gene3D G3DSA:3.40.50.150 7 253 9.0E-107 T 14-10-2018 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Gene3D G3DSA:3.50.50.60 265 663 1.1E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 2.0E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 3.1E-153 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 SUPERFAMILY SSF51905 266 661 1.1E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 6.7E-47 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEJY3_11320 071f4b3948528ed5d98c55f0861b2422 672 Gene3D G3DSA:3.30.9.10 349 573 1.1E-131 T 14-10-2018 VEJY3_08910 3d75bcb7071b384e8654f46a9cb8d260 449 Gene3D G3DSA:1.10.443.10 246 423 9.6E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_08910 3d75bcb7071b384e8654f46a9cb8d260 449 Pfam PF00589 Phage integrase family 247 409 1.2E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_08910 3d75bcb7071b384e8654f46a9cb8d260 449 SUPERFAMILY SSF56349 152 416 1.24E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_08910 3d75bcb7071b384e8654f46a9cb8d260 449 Gene3D G3DSA:3.30.160.390 5 102 3.8E-27 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEJY3_08910 3d75bcb7071b384e8654f46a9cb8d260 449 Pfam PF13356 Arm DNA-binding domain 7 92 2.7E-15 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VEJY3_10130 d6f3150b6baddbf7bdea82db988aa47f 235 Gene3D G3DSA:3.40.50.150 11 235 7.9E-75 T 14-10-2018 VEJY3_10130 d6f3150b6baddbf7bdea82db988aa47f 235 Pfam PF13489 Methyltransferase domain 52 202 1.2E-24 T 14-10-2018 VEJY3_10130 d6f3150b6baddbf7bdea82db988aa47f 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.12 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VEJY3_10130 d6f3150b6baddbf7bdea82db988aa47f 235 SUPERFAMILY SSF53335 15 232 6.12E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 Pfam PF02254 TrkA-N domain 8 123 4.8E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 Pfam PF02080 TrkA-C domain 154 218 3.8E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 SUPERFAMILY SSF51735 6 136 2.31E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 Gene3D G3DSA:3.40.50.720 2 140 2.9E-34 T 14-10-2018 VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 SUPERFAMILY SSF116726 135 218 1.06E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_04115 114744e74ac6d48e6d806e1929694fd9 220 Gene3D G3DSA:3.30.70.1450 141 216 3.4E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_18166 379ec1f374a5e0e86ceecea2a64c6a81 188 Gene3D G3DSA:3.90.1680.10 1 185 1.2E-36 T 14-10-2018 IPR036590 SOS response associated peptidase-like VEJY3_18166 379ec1f374a5e0e86ceecea2a64c6a81 188 SUPERFAMILY SSF143081 2 180 6.28E-39 T 14-10-2018 IPR036590 SOS response associated peptidase-like VEJY3_18166 379ec1f374a5e0e86ceecea2a64c6a81 188 Pfam PF02586 SOS response associated peptidase (SRAP) 1 182 1.9E-27 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) VEJY3_16116 06562f604ec0467197000d29245026fe 109 Pfam PF13642 protein structure with unknown function 8 106 2.7E-33 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 VEJY3_16116 06562f604ec0467197000d29245026fe 109 Gene3D G3DSA:2.40.10.320 2 65 1.1E-6 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Pfam PF07085 DRTGG domain 233 344 7.4E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 SUPERFAMILY SSF52540 1 240 1.13E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Pfam PF13500 AAA domain 3 229 5.5E-51 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Gene3D G3DSA:3.40.50.300 5 217 6.7E-14 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Gene3D G3DSA:3.40.50.10750 529 682 2.0E-133 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Gene3D G3DSA:3.40.50.10950 398 709 2.0E-133 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.5E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 SUPERFAMILY SSF75138 229 353 7.19E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 SUPERFAMILY SSF53659 392 709 9.46E-96 T 14-10-2018 VEJY3_10830 8eb335c003e9781e1c4ae9d864f5bdca 714 Gene3D G3DSA:3.40.1390.20 225 365 8.8E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 187 6.1E-5 T 14-10-2018 VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 SUPERFAMILY SSF51735 3 243 1.01E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 2.6E-65 T 14-10-2018 VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_19291 3fa1e3ad03f60d987a726683789b5a5e 244 Gene3D G3DSA:3.40.50.720 1 244 3.4E-84 T 14-10-2018 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 321 3.1E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 Gene3D G3DSA:3.40.190.10 134 384 5.2E-133 T 14-10-2018 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 SUPERFAMILY SSF53850 24 391 1.66E-88 T 14-10-2018 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 Gene3D G3DSA:3.40.190.10 44 353 5.2E-133 T 14-10-2018 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 167 186 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 32 50 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 66 84 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 295 316 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 229 248 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 126 145 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 353 372 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_23096 aaced0454c80b373e5fe08553e783f96 392 PRINTS PR00181 Maltose binding protein signature 147 166 3.8E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEJY3_03355 d2a0a411c0111dd2b3ebe92435326b10 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.7E-37 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_03355 d2a0a411c0111dd2b3ebe92435326b10 505 Gene3D G3DSA:3.60.110.10 208 477 1.2E-15 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_03355 d2a0a411c0111dd2b3ebe92435326b10 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.535 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VEJY3_03355 d2a0a411c0111dd2b3ebe92435326b10 505 SUPERFAMILY SSF56317 214 486 1.7E-41 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 Pfam PF00691 OmpA family 73 168 1.4E-22 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 Gene3D G3DSA:3.30.1330.60 47 174 1.3E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 PRINTS PR01021 OMPA domain signature 119 135 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 PRINTS PR01021 OMPA domain signature 74 96 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 PRINTS PR01021 OMPA domain signature 104 119 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 SUPERFAMILY SSF103088 59 173 1.44E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_04940 9051784aadaccae52c37c0062025fc9a 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.767 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VEJY3_13135 603574ab486f0ba863f84b7f26627bac 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 2.2E-18 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VEJY3_13135 603574ab486f0ba863f84b7f26627bac 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 33.585 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 Gene3D G3DSA:3.40.50.12740 6 213 5.6E-57 T 14-10-2018 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 Pfam PF00072 Response regulator receiver domain 7 117 1.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 SMART SM00448 5 118 1.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 6.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 6.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 6.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 SUPERFAMILY SSF46894 143 213 7.48E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 SMART SM00421 150 207 1.5E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_02955 a89cc0d55d508ba2792edeb901e10cdc 217 SUPERFAMILY SSF52172 5 133 7.4E-28 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_01980 65151eccaa8c462b3b6795cf19d5b9cc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.4E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VEJY3_01980 65151eccaa8c462b3b6795cf19d5b9cc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VEJY3_01980 65151eccaa8c462b3b6795cf19d5b9cc 130 SUPERFAMILY SSF54211 5 130 2.05E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_01980 65151eccaa8c462b3b6795cf19d5b9cc 130 Gene3D G3DSA:3.30.230.10 1 130 1.2E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_01980 65151eccaa8c462b3b6795cf19d5b9cc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.912 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 SMART SM00947 30 192 1.4E-67 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 Gene3D G3DSA:3.40.1050.10 1 222 1.6E-90 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 SUPERFAMILY SSF53056 2 212 1.03E-74 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VEJY3_12980 92914fd8869882d5ce700e11b06decf0 222 Pfam PF00484 Carbonic anhydrase 38 188 8.1E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEJY3_03105 e587bf17ed65d2eb79dce6980feb8b02 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.49 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VEJY3_03105 e587bf17ed65d2eb79dce6980feb8b02 129 Gene3D G3DSA:3.30.310.230 3 128 1.3E-45 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VEJY3_03105 e587bf17ed65d2eb79dce6980feb8b02 129 Pfam PF07417 Transcriptional regulator Crl 6 123 6.6E-50 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VEJY3_04050 849081c621d7850bdf8a97c261246941 509 SUPERFAMILY SSF56601 45 387 3.25E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_04050 849081c621d7850bdf8a97c261246941 509 Pfam PF00144 Beta-lactamase 54 374 1.1E-53 T 14-10-2018 IPR001466 Beta-lactamase-related VEJY3_04050 849081c621d7850bdf8a97c261246941 509 Gene3D G3DSA:3.40.710.10 51 387 9.9E-73 T 14-10-2018 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Pfam PF00563 EAL domain 600 834 2.2E-67 T 14-10-2018 IPR001633 EAL domain VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SUPERFAMILY SSF158472 369 418 4.58E-6 T 14-10-2018 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SMART SM00052 592 839 7.1E-98 T 14-10-2018 IPR001633 EAL domain VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 7.5E-29 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SMART SM00304 368 421 1.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Gene3D G3DSA:3.20.20.450 595 847 9.4E-87 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SMART SM00267 416 582 3.3E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SUPERFAMILY SSF55073 432 584 2.35E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Gene3D G3DSA:1.20.1480.50 330 427 7.3E-8 T 14-10-2018 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Gene3D G3DSA:3.30.450.20 36 228 2.5E-13 T 14-10-2018 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Gene3D G3DSA:3.30.70.270 428 594 5.5E-34 T 14-10-2018 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 Pfam PF02743 Cache domain 48 275 2.4E-21 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_00530 2a0efa41504c64ce88c85cf4443097d0 848 SUPERFAMILY SSF141868 599 846 1.01E-80 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 Gene3D G3DSA:3.40.50.880 14 219 6.5E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 289 331 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 Pfam PF12833 Helix-turn-helix domain 258 336 8.1E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 SMART SM00342 252 335 2.5E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 SUPERFAMILY SSF46689 236 286 2.42E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 2.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 2.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 Gene3D G3DSA:1.10.10.60 232 341 1.2E-31 T 14-10-2018 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 SUPERFAMILY SSF46689 288 340 1.03E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21506 dac17f9a30482779f33623d7b9ab12c3 348 SUPERFAMILY SSF52317 17 209 3.94E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 SMART SM00448 5 116 3.5E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 SUPERFAMILY SSF46894 132 234 2.15E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 SUPERFAMILY SSF52172 3 126 3.84E-42 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 Gene3D G3DSA:1.10.10.10 130 239 1.6E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 Gene3D G3DSA:3.40.50.2300 1 125 3.7E-40 T 14-10-2018 VEJY3_00715 a35ba59d16aaedf551a3764caebffd14 239 SMART SM00862 156 232 3.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_12985 2026ec85beddcadc7e23ae96f38e8da5 176 Gene3D G3DSA:3.40.50.2020 1 176 2.1E-65 T 14-10-2018 VEJY3_12985 2026ec85beddcadc7e23ae96f38e8da5 176 Pfam PF00156 Phosphoribosyl transferase domain 15 159 9.2E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_12985 2026ec85beddcadc7e23ae96f38e8da5 176 SUPERFAMILY SSF53271 3 175 4.46E-56 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_20691 fedb29396001d294540b4e93d114af4d 437 Pfam PF07804 HipA-like C-terminal domain 151 404 7.2E-49 T 14-10-2018 IPR012893 HipA-like, C-terminal VEJY3_20691 fedb29396001d294540b4e93d114af4d 437 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 1.6E-28 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 VEJY3_20691 fedb29396001d294540b4e93d114af4d 437 Pfam PF13657 HipA N-terminal domain 6 103 1.4E-20 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 Pfam PF03054 tRNA methyl transferase 7 371 1.5E-141 T 14-10-2018 VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 372 40.033 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 Gene3D G3DSA:2.30.30.280 222 292 5.1E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 Gene3D G3DSA:3.40.50.620 1 220 6.5E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 SUPERFAMILY SSF52402 5 253 9.7E-57 T 14-10-2018 VEJY3_05520 590ec482188a7b19e90f3cfcb807b600 380 Gene3D G3DSA:2.40.30.10 293 378 8.8E-34 T 14-10-2018 VEJY3_01020 b989c7c2592e18707c820bdb8edcd409 401 Pfam PF04230 Polysaccharide pyruvyl transferase 13 328 9.7E-22 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 SMART SM00345 21 79 1.1E-4 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 Gene3D G3DSA:1.10.10.10 5 78 9.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 6.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 Gene3D G3DSA:3.40.640.10 119 486 1.5E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 SUPERFAMILY SSF53383 127 491 8.06E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 Pfam PF00155 Aminotransferase class I and II 179 486 3.3E-15 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_24196 4d0c6de21691cced6d1a15cd06c7cd38 491 SUPERFAMILY SSF46785 10 78 3.27E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Gene3D G3DSA:3.30.559.10 169 401 2.5E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Pfam PF02817 e3 binding domain 113 146 3.1E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Pfam PF00364 Biotin-requiring enzyme 4 76 1.8E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Gene3D G3DSA:2.40.50.100 1 79 1.5E-20 T 14-10-2018 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 SUPERFAMILY SSF47005 107 150 8.89E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 SUPERFAMILY SSF52777 171 400 1.11E-90 T 14-10-2018 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Gene3D G3DSA:4.10.320.10 102 152 7.5E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 SUPERFAMILY SSF51230 1 94 3.4E-23 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_03860 582bfcd86f3681132f8b20367ac185c0 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 1.4E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Gene3D G3DSA:1.10.8.60 313 380 1.2E-17 T 14-10-2018 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Gene3D G3DSA:3.40.50.300 130 312 9.5E-67 T 14-10-2018 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 SUPERFAMILY SSF46689 382 466 1.66E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 SUPERFAMILY SSF52172 2 187 1.85E-43 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 SMART SM00448 4 115 3.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 SMART SM00382 162 316 9.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Pfam PF00158 Sigma-54 interaction domain 142 308 1.3E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 SUPERFAMILY SSF52540 141 385 1.16E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 14-10-2018 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_00535 375e0e5fe994f4872a1f8a6c20cee2d6 467 Gene3D G3DSA:1.10.10.60 381 467 1.8E-26 T 14-10-2018 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 SUPERFAMILY SSF52540 273 649 3.6E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Pfam PF00176 SNF2 family N-terminal domain 174 343 8.9E-15 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 SMART SM00490 519 603 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:3.40.50.10810 150 437 7.2E-106 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:3.40.50.10810 627 713 3.2E-6 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 1.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.124 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:2.30.30.930 55 114 5.4E-26 T 14-10-2018 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 SUPERFAMILY SSF52540 127 373 2.66E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 SMART SM00487 150 342 3.8E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:3.40.50.300 483 626 9.1E-25 T 14-10-2018 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:2.30.30.140 1 53 5.6E-24 T 14-10-2018 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.1E-148 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VEJY3_13750 3dc5f50f4f0a62f572e431bd43b6f7c9 969 Gene3D G3DSA:3.30.360.80 714 786 2.9E-30 T 14-10-2018 VEJY3_02075 aa1fd928f36bdce3d6b339c854955200 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02075 aa1fd928f36bdce3d6b339c854955200 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.244 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02075 aa1fd928f36bdce3d6b339c854955200 398 Pfam PF01098 Cell cycle protein 26 381 2.4E-114 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_19671 3f464f19d128eec9aa618a69493309e8 139 Pfam PF04143 Sulphur transport 5 126 1.9E-10 T 14-10-2018 IPR007272 Sulphur transport domain VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 Gene3D G3DSA:3.40.50.720 121 270 1.6E-24 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 Gene3D G3DSA:3.40.50.720 271 368 3.2E-17 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 SUPERFAMILY SSF51971 1 366 4.41E-51 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 73 3.3E-20 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 SUPERFAMILY SSF54373 246 314 4.12E-25 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 Gene3D G3DSA:3.40.50.720 2 102 1.6E-33 T 14-10-2018 VEJY3_00925 e89d2d32e3e951a2a5e40c4ebe87cab8 369 Pfam PF03275 UDP-galactopyranose mutase 148 348 1.3E-82 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 VEJY3_12060 13db0b6b0fa0860b9da847e02a9b0b85 185 Pfam PF01765 Ribosome recycling factor 20 183 1.1E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VEJY3_12060 13db0b6b0fa0860b9da847e02a9b0b85 185 SUPERFAMILY SSF55194 2 185 1.11E-71 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VEJY3_12060 13db0b6b0fa0860b9da847e02a9b0b85 185 Gene3D G3DSA:3.30.1360.40 31 105 4.3E-68 T 14-10-2018 VEJY3_12060 13db0b6b0fa0860b9da847e02a9b0b85 185 Gene3D G3DSA:1.10.132.20 11 182 4.3E-68 T 14-10-2018 VEJY3_12060 13db0b6b0fa0860b9da847e02a9b0b85 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.857 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 Gene3D G3DSA:1.10.10.60 194 298 2.6E-23 T 14-10-2018 VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 Pfam PF12833 Helix-turn-helix domain 216 291 4.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 SMART SM00342 210 293 5.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 181 8.8E-33 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 SUPERFAMILY SSF46689 246 296 4.08E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17861 06af3a62ddfa58e53a8dd9518a321dba 299 SUPERFAMILY SSF46689 194 244 7.17E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20246 f371b76d6a8ed7d78f3ad76972e87f77 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_20246 f371b76d6a8ed7d78f3ad76972e87f77 191 Gene3D G3DSA:1.10.357.10 70 190 1.2E-12 T 14-10-2018 VEJY3_20246 f371b76d6a8ed7d78f3ad76972e87f77 191 SUPERFAMILY SSF46689 2 65 2.77E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20246 f371b76d6a8ed7d78f3ad76972e87f77 191 Gene3D G3DSA:1.10.10.60 1 66 6.6E-21 T 14-10-2018 VEJY3_20246 f371b76d6a8ed7d78f3ad76972e87f77 191 SUPERFAMILY SSF48498 82 174 1.67E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_00285 290c84f8deb8d63845a3369844d2257e 259 Gene3D G3DSA:3.40.50.150 57 259 2.0E-75 T 14-10-2018 VEJY3_00285 290c84f8deb8d63845a3369844d2257e 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.949 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VEJY3_00285 290c84f8deb8d63845a3369844d2257e 259 SUPERFAMILY SSF53335 4 255 3.23E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00285 290c84f8deb8d63845a3369844d2257e 259 Gene3D G3DSA:3.40.1630.10 1 56 8.2E-21 T 14-10-2018 VEJY3_00285 290c84f8deb8d63845a3369844d2257e 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 1.7E-106 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Pfam PF00258 Flavodoxin 89 212 3.2E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 3.6E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 SUPERFAMILY SSF63380 252 469 1.43E-63 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 SUPERFAMILY SSF52218 86 233 1.35E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00369 Flavodoxin signature 168 178 1.5E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00369 Flavodoxin signature 88 101 1.5E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00369 Flavodoxin signature 192 211 1.5E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00369 Flavodoxin signature 136 147 1.5E-9 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Pfam PF00667 FAD binding domain 256 448 1.7E-28 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.13 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 SUPERFAMILY SSF52343 468 623 6.94E-51 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Gene3D G3DSA:3.40.50.360 77 240 4.9E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Gene3D G3DSA:1.20.990.10 304 408 2.3E-72 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Gene3D G3DSA:3.40.50.80 469 623 6.0E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 Gene3D G3DSA:2.40.30.10 257 463 2.3E-72 T 14-10-2018 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PIRSF PIRSF000207 20 623 3.6E-277 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_13945 a8f40bb98a395a39bf4b7f33c180fe2d 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.6E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 Pfam PF01145 SPFH domain / Band 7 family 24 192 2.6E-35 T 14-10-2018 IPR001107 Band 7 domain VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 Gene3D G3DSA:3.30.479.30 47 178 2.4E-49 T 14-10-2018 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 SMART SM00244 19 176 1.6E-64 T 14-10-2018 IPR001107 Band 7 domain VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 26 48 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 73 94 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 108 125 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 152 170 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 128 151 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 171 192 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 PRINTS PR00721 Stomatin signature 196 219 9.2E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_18616 15f10bee747f9f3fc4ee4c3ebc08b00f 260 SUPERFAMILY SSF117892 50 183 1.57E-43 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_00895 7895f16f6af5e3c0b112f3f7619c9c1d 343 Gene3D G3DSA:3.40.50.2000 14 335 4.3E-56 T 14-10-2018 VEJY3_00895 7895f16f6af5e3c0b112f3f7619c9c1d 343 SUPERFAMILY SSF53756 3 341 1.95E-64 T 14-10-2018 VEJY3_00895 7895f16f6af5e3c0b112f3f7619c9c1d 343 Gene3D G3DSA:3.40.50.2000 153 325 4.3E-56 T 14-10-2018 VEJY3_00895 7895f16f6af5e3c0b112f3f7619c9c1d 343 Pfam PF00534 Glycosyl transferases group 1 165 320 8.4E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_03125 9b25717d36144189559198f5067034a9 372 Gene3D G3DSA:3.40.140.10 9 151 1.8E-46 T 14-10-2018 VEJY3_03125 9b25717d36144189559198f5067034a9 372 Pfam PF01872 RibD C-terminal domain 158 353 3.6E-46 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VEJY3_03125 9b25717d36144189559198f5067034a9 372 Gene3D G3DSA:3.40.430.10 152 370 2.1E-61 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_03125 9b25717d36144189559198f5067034a9 372 PIRSF PIRSF006769 10 372 4.8E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VEJY3_03125 9b25717d36144189559198f5067034a9 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 6.8E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEJY3_03125 9b25717d36144189559198f5067034a9 372 SUPERFAMILY SSF53927 14 156 2.01E-48 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_03125 9b25717d36144189559198f5067034a9 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEJY3_03125 9b25717d36144189559198f5067034a9 372 SUPERFAMILY SSF53597 155 366 1.23E-50 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 SUPERFAMILY SSF56672 385 780 3.28E-118 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 80 296 1.1E-19 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:1.10.287.690 468 514 5.6E-25 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Pfam PF00136 DNA polymerase family B 377 743 7.7E-43 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:3.90.1600.10 348 454 1.9E-28 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 SUPERFAMILY SSF53098 4 389 2.99E-87 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:3.90.1600.30 516 637 1.8E-9 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 SMART SM00486 153 558 6.5E-68 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:1.10.132.60 643 787 6.3E-60 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:3.30.70.2250 41 108 4.8E-38 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:2.40.50.590 6 153 4.8E-38 T 14-10-2018 VEJY3_10210 5600a44d7facb604865f3258101d90bb 787 Gene3D G3DSA:3.30.420.10 156 347 6.7E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_03175 d028a0b63e1f69feecf31e4c1af214f9 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.8E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_03175 d028a0b63e1f69feecf31e4c1af214f9 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VEJY3_03040 dc919bb2dd053d011ec270e10a7c0a94 177 SUPERFAMILY SSF53927 7 159 5.19E-56 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_03040 dc919bb2dd053d011ec270e10a7c0a94 177 Pfam PF14437 MafB19-like deaminase 10 155 2.2E-30 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VEJY3_03040 dc919bb2dd053d011ec270e10a7c0a94 177 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 44.828 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VEJY3_03040 dc919bb2dd053d011ec270e10a7c0a94 177 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEJY3_03040 dc919bb2dd053d011ec270e10a7c0a94 177 Gene3D G3DSA:3.40.140.10 4 169 4.0E-63 T 14-10-2018 VEJY3_21056 a8ea998a06b051162dd97c7d4f33c1e6 139 SUPERFAMILY SSF51316 3 135 2.93E-40 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_21056 a8ea998a06b051162dd97c7d4f33c1e6 139 Gene3D G3DSA:2.170.150.70 6 121 2.8E-16 T 14-10-2018 VEJY3_21056 a8ea998a06b051162dd97c7d4f33c1e6 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 115 2.6E-21 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.2E-99 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.2E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.546 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 Gene3D G3DSA:3.40.50.620 1 179 2.4E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 Gene3D G3DSA:3.30.1300.10 181 283 6.8E-26 T 14-10-2018 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 61 1.3E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEJY3_12960 dfff62bd023906284072d92b7d4e58bb 300 SUPERFAMILY SSF52374 1 280 4.02E-104 T 14-10-2018 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 SUPERFAMILY SSF53850 24 341 1.46E-85 T 14-10-2018 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 308 2.7E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 Gene3D G3DSA:3.40.190.10 27 308 6.2E-107 T 14-10-2018 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 Gene3D G3DSA:3.40.190.10 130 338 6.2E-107 T 14-10-2018 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PIRSF PIRSF019574 2 344 1.4E-108 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_16921 291d6bd04b5eec9de16e9fa581d0e770 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 8.7E-62 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_17296 b5f590b41a39c7539d8a9704e2408015 236 SUPERFAMILY SSF55681 5 232 3.98E-42 T 14-10-2018 VEJY3_17296 b5f590b41a39c7539d8a9704e2408015 236 Gene3D G3DSA:3.30.930.10 6 236 2.6E-40 T 14-10-2018 VEJY3_06410 afa12eab9e8bfac35666728d609b546b 374 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 57 365 54.674 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VEJY3_06410 afa12eab9e8bfac35666728d609b546b 374 Gene3D G3DSA:3.40.50.150 90 363 5.0E-79 T 14-10-2018 VEJY3_06410 afa12eab9e8bfac35666728d609b546b 374 Pfam PF05971 Protein of unknown function (DUF890) 56 363 8.7E-134 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VEJY3_06410 afa12eab9e8bfac35666728d609b546b 374 PIRSF PIRSF029038 46 374 2.3E-161 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VEJY3_06410 afa12eab9e8bfac35666728d609b546b 374 SUPERFAMILY SSF53335 95 363 7.66E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 SUPERFAMILY SSF51726 1 354 5.41E-123 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 Gene3D G3DSA:3.20.20.210 1 355 1.4E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.618 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.3E-141 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.3E-139 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEJY3_14745 f314a584d9ff0f200e708ee88c2d12ac 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 SUPERFAMILY SSF55347 154 308 2.22E-51 T 14-10-2018 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 4.9E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 Gene3D G3DSA:3.40.50.720 6 329 2.3E-120 T 14-10-2018 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 8.0E-15 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 SMART SM00859 3 146 2.2E-43 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 Gene3D G3DSA:3.30.360.10 153 312 2.3E-120 T 14-10-2018 VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 SUPERFAMILY SSF51735 1 171 1.05E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14105 16d394aff3303d67e837b567d6d1c4f3 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.976 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 Gene3D G3DSA:3.40.710.10 18 273 1.6E-88 T 14-10-2018 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 SMART SM00936 275 365 2.0E-24 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 SUPERFAMILY SSF69189 275 366 3.92E-21 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 364 1.7E-20 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 Gene3D G3DSA:2.60.410.10 275 365 1.4E-24 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 SUPERFAMILY SSF56601 1 275 3.97E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 23 254 1.1E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.2E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.2E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_23641 82ecd0bc1196490a03889bffa2ca974e 384 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.2E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SMART SM00448 668 781 1.6E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Pfam PF01627 Hpt domain 840 918 2.8E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Gene3D G3DSA:1.20.1480.50 164 270 1.5E-7 T 14-10-2018 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SMART SM00387 402 518 3.3E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF52172 533 644 1.57E-9 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SMART SM00388 290 355 2.9E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SMART SM00073 829 927 1.5E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 14-10-2018 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 2.6E-53 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SMART SM00304 198 250 3.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 14-10-2018 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Pfam PF00072 Response regulator receiver domain 670 780 2.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Gene3D G3DSA:3.30.565.10 357 521 1.0E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Gene3D G3DSA:1.20.120.160 818 932 1.6E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF47226 764 919 3.27E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Gene3D G3DSA:3.40.50.2300 657 789 9.8E-40 T 14-10-2018 VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF55874 344 516 9.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 SUPERFAMILY SSF52172 667 785 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_13240 946e72dd032e9ebae93420e859b34576 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 6.7E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 SMART SM00480 17 362 1.7E-149 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 PIRSF PIRSF000804 1 366 2.0E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Gene3D G3DSA:3.10.150.10 1 122 3.0E-42 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.4E-39 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.0E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 SUPERFAMILY SSF55979 126 244 4.08E-29 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 SUPERFAMILY SSF55979 1 118 2.2E-30 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 SUPERFAMILY SSF55979 245 366 9.99E-37 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Gene3D G3DSA:3.10.150.10 248 366 1.6E-39 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Gene3D G3DSA:3.10.150.10 124 247 2.4E-36 T 14-10-2018 VEJY3_00060 9679955d95001980ed602fb9a072d6ad 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.9E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEJY3_14915 7083f6290b1a3eeb8bcc17c6a156b785 106 Pfam PF00581 Rhodanese-like domain 13 98 1.3E-11 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_14915 7083f6290b1a3eeb8bcc17c6a156b785 106 SMART SM00450 7 102 2.1E-18 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_14915 7083f6290b1a3eeb8bcc17c6a156b785 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.133 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VEJY3_14915 7083f6290b1a3eeb8bcc17c6a156b785 106 SUPERFAMILY SSF52821 1 105 2.88E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_14915 7083f6290b1a3eeb8bcc17c6a156b785 106 Gene3D G3DSA:3.40.250.10 1 101 8.8E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 Gene3D G3DSA:3.30.420.40 129 293 2.5E-130 T 14-10-2018 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.27 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 SUPERFAMILY SSF53067 101 309 3.24E-43 T 14-10-2018 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 5.2E-122 T 14-10-2018 IPR017861 Kae1/TsaD family VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.3E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 Pfam PF00814 Glycoprotease family 24 307 2.2E-101 T 14-10-2018 IPR000905 Gcp-like domain VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 Gene3D G3DSA:3.30.420.40 3 315 2.5E-130 T 14-10-2018 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 SUPERFAMILY SSF53067 3 123 6.47E-31 T 14-10-2018 VEJY3_01835 a1f97c5db997f1deebdf916ffab23e3d 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 Pfam PF00664 ABC transporter transmembrane region 144 400 6.7E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 Gene3D G3DSA:3.40.50.300 447 691 7.9E-55 T 14-10-2018 VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 SMART SM00382 479 666 4.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 SUPERFAMILY SSF52540 449 672 1.84E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 Gene3D G3DSA:1.20.1560.10 125 436 2.8E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 SUPERFAMILY SSF90123 128 436 4.32E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_18181 989fd394573aa3027c51326f2e40abdb 694 Pfam PF00005 ABC transporter 470 620 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07015 60bdc794466ae4e9d4255c7b701f0c84 176 Pfam PF00929 Exonuclease 7 171 9.9E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_07015 60bdc794466ae4e9d4255c7b701f0c84 176 SUPERFAMILY SSF53098 4 175 1.77E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_07015 60bdc794466ae4e9d4255c7b701f0c84 176 Gene3D G3DSA:3.30.420.10 1 176 4.3E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_07015 60bdc794466ae4e9d4255c7b701f0c84 176 SMART SM00479 5 176 1.1E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 Pfam PF07687 Peptidase dimerisation domain 174 285 6.6E-26 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 Gene3D G3DSA:3.40.630.10 21 360 3.8E-79 T 14-10-2018 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 SUPERFAMILY SSF55031 177 291 2.24E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 Gene3D G3DSA:3.30.70.360 177 292 3.8E-79 T 14-10-2018 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 SUPERFAMILY SSF53187 3 377 9.43E-58 T 14-10-2018 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 1.7E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.162 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VEJY3_14110 4d4eb7d7d42216a62740d46ff97a1cb7 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 6.4E-128 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82866 807 1030 2.09E-48 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:1.20.1640.10 24 519 1.0E-256 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.70.1430 54 819 1.0E-256 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82693 54 149 5.58E-23 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82866 307 505 9.42E-33 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82714 198 281 6.67E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82693 150 337 1.8E-17 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.2090.10 193 285 1.0E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.2090.10 721 811 1.0E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 SUPERFAMILY SSF82714 728 802 7.19E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.70.1430 571 669 1.0E-256 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.1E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Pfam PF00873 AcrB/AcrD/AcrF family 18 1027 2.6E-172 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:1.20.1640.10 520 1023 1.0E-256 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.70.1440 670 871 1.0E-256 T 14-10-2018 VEJY3_05745 f1e1a8e053f1cbe66868edf3a1f19a8c 1033 Gene3D G3DSA:3.30.70.1320 150 342 1.0E-256 T 14-10-2018 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 SUPERFAMILY SSF81343 8 130 2.13E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.3E-28 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 Gene3D G3DSA:1.20.1300.10 5 130 6.2E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 PIRSF PIRSF000178 2 130 1.3E-33 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03835 b545a7e94a6612655c480f6766b8793b 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_20781 13e1c7c4aa8e2fbbbfd9451826ed22cd 257 SUPERFAMILY SSF46689 201 250 2.42E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20781 13e1c7c4aa8e2fbbbfd9451826ed22cd 257 SMART SM00342 165 248 7.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_20781 13e1c7c4aa8e2fbbbfd9451826ed22cd 257 Gene3D G3DSA:1.10.10.60 150 249 1.0E-23 T 14-10-2018 VEJY3_20781 13e1c7c4aa8e2fbbbfd9451826ed22cd 257 Pfam PF12833 Helix-turn-helix domain 171 245 1.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_09655 8aa0585bfc452dcb21ff29badedf1af3 164 Pfam PF05117 Family of unknown function (DUF695) 27 160 3.9E-15 T 14-10-2018 IPR016097 Domain of unknown function DUF695 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 SUPERFAMILY SSF55060 205 382 4.96E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 382 5.4E-148 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 SUPERFAMILY SSF54211 2 204 4.17E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.262 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.3E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Gene3D G3DSA:3.30.70.890 203 358 8.4E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.9E-44 T 14-10-2018 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 5.9E-44 T 14-10-2018 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 5.9E-44 T 14-10-2018 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 5.9E-44 T 14-10-2018 VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Gene3D G3DSA:3.30.230.10 23 202 8.4E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 Pfam PF08544 GHMP kinases C terminal 280 362 2.8E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VEJY3_09460 aa89b9c14ea1a1ad7d19b04742c00008 386 PIRSF PIRSF000530 1 384 1.2E-128 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_15365 6091a1be289d2b3448be1e85d78628a0 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.9E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VEJY3_15365 6091a1be289d2b3448be1e85d78628a0 88 Gene3D G3DSA:1.10.1580.20 1 88 1.9E-43 T 14-10-2018 IPR038134 YihD-like superfamily VEJY3_15365 6091a1be289d2b3448be1e85d78628a0 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-35 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 SUPERFAMILY SSF55874 420 553 4.11E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 Gene3D G3DSA:3.30.450.40 226 352 5.1E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 228 351 7.0E-7 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 Gene3D G3DSA:3.30.565.10 419 554 5.9E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 6.6E-59 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VEJY3_02435 d48f8af92410cde879c6be9b6cbbeb95 556 SUPERFAMILY SSF55781 227 351 1.59E-7 T 14-10-2018 VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 Gene3D G3DSA:2.40.50.100 74 152 1.2E-32 T 14-10-2018 VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 Pfam PF00364 Biotin-requiring enzyme 77 151 1.0E-25 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 SUPERFAMILY SSF51230 77 152 1.07E-26 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEJY3_14630 cf6f252f7165bfe0f36559c6236fe26c 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Pfam PF16353 Domain of unknown function(DUF4981) 637 722 2.2E-18 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Gene3D G3DSA:2.70.98.10 735 1026 9.7E-91 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Pfam PF02929 Beta galactosidase small chain 756 1024 1.7E-63 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Gene3D G3DSA:3.20.20.80 329 619 7.3E-123 T 14-10-2018 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SUPERFAMILY SSF51445 329 617 5.28E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 370 388 5.0E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 142 157 5.0E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 526 541 5.0E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 339 353 5.0E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 442 457 5.0E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SUPERFAMILY SSF49303 218 328 4.6E-24 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 330 622 1.7E-111 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SMART SM01038 750 1026 5.9E-100 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Gene3D G3DSA:2.60.40.10 217 328 1.3E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 442 456 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Gene3D G3DSA:2.60.40.10 624 726 1.1E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 47 214 2.9E-58 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Hamap MF_01687 Beta-galactosidase [lacZ]. 1 1028 16.826 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Gene3D G3DSA:2.60.120.260 5 215 8.5E-83 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 Pfam PF00703 Glycosyl hydrolases family 2 218 328 5.7E-15 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SUPERFAMILY SSF49785 8 214 2.55E-65 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SUPERFAMILY SSF74650 745 1026 5.34E-88 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_22596 89aa99444a3ae4a6dac79a223752c314 1028 SUPERFAMILY SSF49303 616 725 3.67E-24 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Gene3D G3DSA:3.90.199.10 34 483 2.9E-180 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 SMART SM00434 13 463 6.0E-232 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.92 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 SUPERFAMILY SSF56719 33 485 3.4E-156 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 5.9E-137 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Gene3D G3DSA:2.120.10.90 502 742 2.9E-15 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Gene3D G3DSA:1.10.268.10 371 456 2.9E-180 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.068 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 Gene3D G3DSA:3.30.1360.40 240 333 2.9E-180 T 14-10-2018 VEJY3_01950 e96ac29803a2102021b1f19b4bba38f3 761 SUPERFAMILY SSF101904 499 743 1.27E-51 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Pfam PF00005 ABC transporter 622 859 2.2E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:1.10.8.280 286 402 3.5E-246 T 14-10-2018 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 SUPERFAMILY SSF52540 620 912 7.01E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.915 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:1.20.1580.10 691 829 1.0E-139 T 14-10-2018 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:1.20.1580.10 90 491 3.5E-246 T 14-10-2018 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:3.40.50.300 6 593 3.5E-246 T 14-10-2018 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 SUPERFAMILY SSF52540 4 568 2.51E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:3.30.190.20 130 243 3.5E-246 T 14-10-2018 VEJY3_13900 5e902545ec6fc10d3efa186275870c84 940 Gene3D G3DSA:3.40.50.300 616 935 1.0E-139 T 14-10-2018 VEJY3_01360 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01360 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 14-10-2018 VEJY3_01360 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01360 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 14-10-2018 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 PIRSF PIRSF000521 120 422 1.8E-43 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 PIRSF PIRSF000521 2 129 1.7E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 Pfam PF00202 Aminotransferase class-III 19 417 3.0E-131 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 SUPERFAMILY SSF53383 20 420 2.15E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 5.3E-181 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 Gene3D G3DSA:3.90.1150.10 5 416 1.4E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_22281 674282063ea7adbd69a8d5d5af9fb075 424 Gene3D G3DSA:3.40.640.10 58 317 1.4E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.539 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.3E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Gene3D G3DSA:2.40.40.20 705 828 8.6E-46 T 14-10-2018 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 2.7E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 SUPERFAMILY SSF53706 39 660 3.8E-200 T 14-10-2018 VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 SUPERFAMILY SSF50692 689 828 6.22E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_17636 e1e3fbe3ddd14b11443cf1756b5843e0 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 Gene3D G3DSA:1.10.150.240 16 86 3.1E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 5.4E-28 T 14-10-2018 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 SUPERFAMILY SSF56784 1 208 4.2E-49 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 Gene3D G3DSA:3.40.50.1000 6 191 3.1E-50 T 14-10-2018 IPR023214 HAD superfamily VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 8.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 8.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 8.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_21361 b931b06d35e69c3144ff9ce1b1d88b8c 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_11745 c5a5b5778d053cf2c50e0c30dc5fb40c 144 SUPERFAMILY SSF56784 5 140 2.53E-8 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_11745 c5a5b5778d053cf2c50e0c30dc5fb40c 144 Pfam PF03031 NLI interacting factor-like phosphatase 8 139 2.6E-10 T 14-10-2018 IPR004274 FCP1 homology domain VEJY3_11745 c5a5b5778d053cf2c50e0c30dc5fb40c 144 Gene3D G3DSA:3.40.50.1000 2 144 1.6E-10 T 14-10-2018 IPR023214 HAD superfamily VEJY3_11285 e1c69617e781b381c384b080b8c41980 1362 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 1.9E-26 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal VEJY3_11285 e1c69617e781b381c384b080b8c41980 1362 Gene3D G3DSA:1.20.58.2200 1300 1359 2.1E-12 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily VEJY3_11285 e1c69617e781b381c384b080b8c41980 1362 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1317 1359 1.1E-14 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal VEJY3_12730 296a8f29f3b3fae725869b4929833467 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.957 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VEJY3_12730 296a8f29f3b3fae725869b4929833467 209 SUPERFAMILY SSF53335 30 209 4.71E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_12730 296a8f29f3b3fae725869b4929833467 209 PIRSF PIRSF005461 1 209 4.8E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VEJY3_12730 296a8f29f3b3fae725869b4929833467 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.6E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VEJY3_12730 296a8f29f3b3fae725869b4929833467 209 Gene3D G3DSA:3.40.50.150 30 209 1.8E-60 T 14-10-2018 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 231 1.8E-39 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 PIRSF PIRSF000497 1 380 8.8E-158 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 1.0E-36 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Gene3D G3DSA:3.30.300.10 11 270 1.8E-158 T 14-10-2018 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 51.64 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 SUPERFAMILY SSF55973 111 231 2.94E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 SUPERFAMILY SSF55973 233 377 3.22E-64 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 3.1E-64 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Gene3D G3DSA:3.30.300.10 103 371 1.8E-158 T 14-10-2018 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 Gene3D G3DSA:3.30.300.10 5 233 1.8E-158 T 14-10-2018 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 SUPERFAMILY SSF55973 3 108 9.42E-40 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_08510 5e5b6a6b8fb4f6a9b9ed70ea96619e27 381 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Gene3D G3DSA:3.40.120.10 5 149 4.6E-40 T 14-10-2018 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 SUPERFAMILY SSF53738 244 367 3.94E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 SUPERFAMILY SSF53738 9 168 1.15E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 SUPERFAMILY SSF53738 158 258 5.49E-14 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Gene3D G3DSA:3.40.120.10 257 373 3.4E-39 T 14-10-2018 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 412 469 6.2E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Gene3D G3DSA:3.30.310.50 375 472 1.3E-25 T 14-10-2018 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 135 1.2E-24 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Gene3D G3DSA:3.40.120.10 176 256 1.3E-32 T 14-10-2018 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 377 2.2E-10 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 SUPERFAMILY SSF55957 412 471 4.32E-13 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01160 13a9df83d413c43763fb3f0f0737e90d 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 2.0E-10 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 668 2.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 SUPERFAMILY SSF47384 443 513 1.24E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 SUPERFAMILY SSF103190 178 311 3.66E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 Gene3D G3DSA:1.10.287.130 441 514 3.8E-21 T 14-10-2018 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 SUPERFAMILY SSF55874 506 668 2.62E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 514 4.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 SMART SM00387 559 670 2.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 SMART SM00388 449 516 4.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 Gene3D G3DSA:3.30.565.10 521 674 5.1E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07185 4284e6469d6d3b0fdfa25a93f169f24e 680 Pfam PF17202 Single cache domain 3 205 318 4.9E-27 T 14-10-2018 IPR033463 Single cache domain 3 VEJY3_07745 267990d21e3d44eb33b04573ed5f6d9d 438 Gene3D G3DSA:1.20.1600.10 23 432 8.3E-80 T 14-10-2018 VEJY3_07745 267990d21e3d44eb33b04573ed5f6d9d 438 SUPERFAMILY SSF56954 4 421 1.96E-89 T 14-10-2018 VEJY3_07745 267990d21e3d44eb33b04573ed5f6d9d 438 Pfam PF02321 Outer membrane efflux protein 235 418 1.6E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_07745 267990d21e3d44eb33b04573ed5f6d9d 438 Pfam PF02321 Outer membrane efflux protein 25 213 5.0E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_03180 2ffa9fdd2f7d42b974cf9c86e706c192 315 Pfam PF00691 OmpA family 196 294 4.2E-17 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_03180 2ffa9fdd2f7d42b974cf9c86e706c192 315 SUPERFAMILY SSF103088 183 300 2.49E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_03180 2ffa9fdd2f7d42b974cf9c86e706c192 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain VEJY3_03180 2ffa9fdd2f7d42b974cf9c86e706c192 315 Gene3D G3DSA:3.30.1330.60 154 302 5.4E-52 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_11560 5224ea4ab903165add6ba8ee67b29708 147 SUPERFAMILY SSF109604 26 112 3.05E-5 T 14-10-2018 VEJY3_11560 5224ea4ab903165add6ba8ee67b29708 147 Pfam PF02050 Flagellar FliJ protein 17 140 3.0E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 Gene3D G3DSA:1.25.40.10 276 366 7.0E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 Pfam PF14559 Tetratricopeptide repeat 188 255 4.5E-6 T 14-10-2018 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 SMART SM00028 312 345 92.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 SMART SM00028 178 211 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 SMART SM00028 278 311 39.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 SMART SM00028 212 245 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 SUPERFAMILY SSF48452 182 339 4.55E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_13850 4c541afbc7b62499031d936b64e1dc7e 366 Gene3D G3DSA:1.25.40.10 145 270 8.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 39.855 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 9.0E-28 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 254 1.6E-16 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 Gene3D G3DSA:3.40.50.620 79 214 1.2E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 Gene3D G3DSA:3.40.50.620 4 280 1.2E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 SUPERFAMILY SSF52374 4 280 5.04E-83 T 14-10-2018 VEJY3_12940 9f447ea54eea69886b75d2b5f36a35ed 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 266 4.1E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Pfam PF04545 Sigma-70, region 4 187 234 3.7E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.246 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 1.2E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Pfam PF04539 Sigma-70 region 3 100 162 3.7E-11 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Pfam PF04542 Sigma-70 region 2 19 91 5.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Gene3D G3DSA:1.20.140.160 90 239 5.5E-44 T 14-10-2018 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 SUPERFAMILY SSF88659 92 158 5.67E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 2.0E-85 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 SUPERFAMILY SSF88946 7 91 7.46E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 SUPERFAMILY SSF88659 163 239 1.2E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 1.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 1.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 1.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 1.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 PIRSF PIRSF000770 1 243 1.6E-38 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_11495 356a32d708a1fbd469b91f0c5ef482c2 244 Gene3D G3DSA:1.10.1740.10 5 88 3.5E-28 T 14-10-2018 VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 318 1.5E-43 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 Pfam PF01590 GAF domain 15 147 2.3E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 SUPERFAMILY SSF55781 7 160 2.4E-21 T 14-10-2018 VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 Gene3D G3DSA:3.30.450.40 5 157 5.4E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 SMART SM00267 143 322 2.0E-50 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 SUPERFAMILY SSF55073 166 321 2.98E-47 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 Gene3D G3DSA:3.30.70.270 158 329 2.5E-55 T 14-10-2018 VEJY3_22161 7b04df5e726c10006f9411092cc039fb 330 SMART SM00065 14 158 4.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_12080 110b60f4f6db195674082e640e67e0ea 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.8E-47 T 14-10-2018 IPR000994 Peptidase M24 VEJY3_12080 110b60f4f6db195674082e640e67e0ea 292 Gene3D G3DSA:3.90.230.10 1 290 1.5E-104 T 14-10-2018 VEJY3_12080 110b60f4f6db195674082e640e67e0ea 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.902 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VEJY3_12080 110b60f4f6db195674082e640e67e0ea 292 SUPERFAMILY SSF55920 3 282 3.4E-82 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VEJY3_12080 110b60f4f6db195674082e640e67e0ea 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 49 7.6E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 SMART SM00354 1 73 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 Gene3D G3DSA:3.40.50.2300 59 155 9.7E-9 T 14-10-2018 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 SUPERFAMILY SSF47413 1 58 4.07E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 Gene3D G3DSA:1.10.260.40 1 58 1.6E-21 T 14-10-2018 VEJY3_08930 f38caba59665385324bdd00c52ab8b37 172 SUPERFAMILY SSF53822 60 141 9.89E-6 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Gene3D G3DSA:3.40.50.720 314 497 2.3E-64 T 14-10-2018 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Gene3D G3DSA:3.90.226.10 1 312 3.9E-91 T 14-10-2018 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 SUPERFAMILY SSF51735 314 496 3.01E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 SUPERFAMILY SSF48179 496 606 7.06E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 SUPERFAMILY SSF48179 625 715 2.89E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 1.3E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 6.1E-26 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Gene3D G3DSA:1.10.1040.50 498 710 7.6E-74 T 14-10-2018 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 SUPERFAMILY SSF52096 2 304 2.56E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 206 3.3E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.1E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_00140 75ecd751888cc763c02e8b99e4620ed5 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 51.994 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 Gene3D G3DSA:1.10.1040.10 208 382 3.8E-64 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 9.6E-24 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.035 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 8.7E-59 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 SUPERFAMILY SSF48179 205 382 6.12E-45 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 SUPERFAMILY SSF51735 3 203 2.25E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01765 5d2753734a7494d83d2972a886088953 382 Gene3D G3DSA:3.40.50.720 2 206 9.0E-79 T 14-10-2018 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_01765 5d2753734a7494d83d2972a886088953 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_09975 68de2497c0c63c4ba985322e7d0e3f9c 199 Gene3D G3DSA:3.90.79.10 18 194 3.1E-47 T 14-10-2018 VEJY3_09975 68de2497c0c63c4ba985322e7d0e3f9c 199 SUPERFAMILY SSF55811 33 189 3.25E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_09975 68de2497c0c63c4ba985322e7d0e3f9c 199 Pfam PF00293 NUDIX domain 46 153 4.8E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 570 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 364 411 6.7E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 SMART SM00091 249 319 0.0059 T 14-10-2018 IPR000014 PAS domain VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Pfam PF17203 Single cache domain 3 75 201 3.3E-22 T 14-10-2018 IPR033463 Single cache domain 3 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 SUPERFAMILY SSF103190 74 201 1.49E-34 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 SMART SM00387 461 573 7.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 570 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Gene3D G3DSA:3.30.450.20 236 354 3.6E-14 T 14-10-2018 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 SUPERFAMILY SSF55785 243 351 8.9E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Gene3D G3DSA:3.30.450.20 67 200 1.9E-42 T 14-10-2018 VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 Gene3D G3DSA:3.30.565.10 425 576 1.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17126 be62d8dbaa928b1e6962027a6e3dddff 579 SUPERFAMILY SSF55874 428 570 1.28E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17886 12bc70637b9f34aa53ffcbbd6bf55528 271 Gene3D G3DSA:3.40.1080.10 7 267 2.8E-63 T 14-10-2018 VEJY3_17886 12bc70637b9f34aa53ffcbbd6bf55528 271 Gene3D G3DSA:3.30.30.40 118 154 2.8E-63 T 14-10-2018 VEJY3_17886 12bc70637b9f34aa53ffcbbd6bf55528 271 SMART SM00882 4 224 5.6E-38 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_17886 12bc70637b9f34aa53ffcbbd6bf55528 271 Pfam PF01144 Coenzyme A transferase 7 220 1.3E-22 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_17886 12bc70637b9f34aa53ffcbbd6bf55528 271 SUPERFAMILY SSF100950 6 268 1.14E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 1210 1318 3.79E-10 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 807 950 4.32E-16 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 1610 1658 14.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 679 780 0.092 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 801 911 3.5E-4 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 289 392 0.0028 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 549 651 0.046 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 1072 1174 0.0018 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 1195 1299 0.032 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 938 1045 0.0069 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 208 263 2.8 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Pfam PF03160 Calx-beta domain 420 522 0.0088 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 558 689 2.75E-10 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 942 1081 9.55E-15 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 153 283 1.83E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 429 560 4.05E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Gene3D G3DSA:2.150.10.10 1645 1793 1.3E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1678 1696 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Gene3D G3DSA:2.60.40.2030 940 1063 7.3E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 1081 1193 1.96E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 687 799 3.66E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF51120 1623 1742 1.16E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 Gene3D G3DSA:2.60.40.2030 809 930 2.7E-6 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_07735 34ac492e0891ff00a1ecdf0769268c0e 1799 SUPERFAMILY SSF141072 300 431 1.31E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 SMART SM00863 171 220 5.1E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.7E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Pfam PF03129 Anticodon binding domain 542 631 2.9E-22 T 14-10-2018 IPR004154 Anticodon-binding VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_06180 526f45d761297133f2684f632ea07d01 642 SUPERFAMILY SSF52954 530 638 3.02E-32 T 14-10-2018 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Gene3D G3DSA:3.30.930.10 224 532 7.0E-129 T 14-10-2018 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 SUPERFAMILY SSF55681 244 527 6.77E-99 T 14-10-2018 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Gene3D G3DSA:3.40.50.800 533 642 1.5E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Gene3D G3DSA:3.30.980.10 70 223 1.2E-63 T 14-10-2018 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 SUPERFAMILY SSF55186 65 242 1.14E-64 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Gene3D G3DSA:3.30.54.20 131 188 1.2E-63 T 14-10-2018 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.184 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEJY3_06180 526f45d761297133f2684f632ea07d01 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 Pfam PF10150 Ribonuclease E/G family 121 390 5.5E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 SUPERFAMILY SSF50249 40 124 3.97E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 Hamap MF_00970 Ribonuclease E [rne]. 1 1016 35.944 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 Gene3D G3DSA:2.40.50.140 32 125 4.0E-32 T 14-10-2018 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 Gene3D G3DSA:3.40.1260.20 400 508 1.9E-38 T 14-10-2018 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 SMART SM00316 37 119 1.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10725 de9eb744658318286a164baa6f1533e8 1029 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Gene3D G3DSA:2.150.10.10 29 85 2.3E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 77 0.0017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 116 130 32.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.0033 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.022 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 SUPERFAMILY SSF51120 9 95 4.32E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 PRINTS PR00313 NodO calcium binding signature 106 114 1.5E-11 T 14-10-2018 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 PRINTS PR00313 NodO calcium binding signature 76 87 1.5E-11 T 14-10-2018 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 PRINTS PR00313 NodO calcium binding signature 88 96 1.5E-11 T 14-10-2018 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 PRINTS PR00313 NodO calcium binding signature 124 133 1.5E-11 T 14-10-2018 VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 SUPERFAMILY SSF51120 82 206 2.09E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 Gene3D G3DSA:2.150.10.10 86 228 1.1E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_10235 82e22e533f6048a3d1773cdf0301b086 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Gene3D G3DSA:2.40.110.10 128 241 4.6E-46 T 14-10-2018 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 SUPERFAMILY SSF56645 6 249 1.57E-84 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Gene3D G3DSA:1.10.540.10 2 127 4.2E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 1.4E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 PIRSF PIRSF016578 8 111 0.0092 T 14-10-2018 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 PIRSF PIRSF016578 143 389 3.4E-10 T 14-10-2018 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Gene3D G3DSA:1.20.140.10 242 389 1.5E-47 T 14-10-2018 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 6.2E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEJY3_18541 b149cf30bcc7d861bf44deb902e6d28d 389 SUPERFAMILY SSF47203 234 387 3.54E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 SUPERFAMILY SSF51261 144 390 8.37E-72 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 Gene3D G3DSA:3.10.450.350 172 409 5.3E-81 T 14-10-2018 VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 Pfam PF01551 Peptidase family M23 295 389 2.1E-31 T 14-10-2018 IPR016047 Peptidase M23 VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 8.1E-5 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 Gene3D G3DSA:3.10.450.350 70 158 2.6E-11 T 14-10-2018 VEJY3_12770 1f00b98ffcb48209219d01d570ad1446 429 Gene3D G3DSA:2.70.70.10 266 395 5.3E-81 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_21811 639ffab9e91177e2c2056141d75b47f1 191 Pfam PF08242 Methyltransferase domain 41 136 3.3E-13 T 14-10-2018 IPR013217 Methyltransferase type 12 VEJY3_21811 639ffab9e91177e2c2056141d75b47f1 191 Gene3D G3DSA:3.40.50.150 1 178 3.2E-27 T 14-10-2018 VEJY3_21811 639ffab9e91177e2c2056141d75b47f1 191 SUPERFAMILY SSF53335 5 190 1.44E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_05630 b41cd36cc1fd236ba34e4221235d4938 275 Gene3D G3DSA:3.40.50.720 1 275 4.6E-44 T 14-10-2018 VEJY3_05630 b41cd36cc1fd236ba34e4221235d4938 275 SUPERFAMILY SSF51735 8 268 1.15E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_05630 b41cd36cc1fd236ba34e4221235d4938 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 210 4.1E-12 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.8E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Gene3D G3DSA:3.30.565.10 1 220 6.5E-96 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Gene3D G3DSA:3.30.230.10 221 393 1.8E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 8.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 5.9E-70 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 SUPERFAMILY SSF56719 395 796 7.85E-88 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.245 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 SMART SM00433 35 798 7.8E-276 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Gene3D G3DSA:3.40.50.670 399 573 1.3E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.1E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Gene3D G3DSA:3.10.20.690 593 684 1.4E-34 T 14-10-2018 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 SMART SM00387 31 175 1.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Gene3D G3DSA:3.40.50.670 704 804 3.4E-26 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 SUPERFAMILY SSF55874 4 213 9.95E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 SUPERFAMILY SSF54211 221 393 8.54E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_00070 2d0de34ca7501c3cad8fa56ce4e1bd8e 805 Pfam PF00204 DNA gyrase B 221 391 1.3E-59 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82714 185 266 2.88E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82866 292 491 3.14E-37 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 4.3E-173 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82693 40 135 6.8E-20 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:1.20.1640.10 509 1008 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.70.1440 655 856 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.70.1430 556 654 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.70.1430 40 804 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82714 713 787 9.29E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82866 793 1014 1.57E-43 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.2090.10 179 270 8.7E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.70.1320 135 328 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 SUPERFAMILY SSF82693 136 325 8.89E-21 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:1.20.1640.10 10 508 8.7E-262 T 14-10-2018 VEJY3_20176 c2a5a1673d2f362f9ff7acff4059e951 1019 Gene3D G3DSA:3.30.2090.10 706 796 8.7E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Gene3D G3DSA:2.40.30.170 339 422 1.3E-15 T 14-10-2018 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Gene3D G3DSA:2.40.50.100 302 338 1.3E-15 T 14-10-2018 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Gene3D G3DSA:2.40.50.100 77 102 6.1E-6 T 14-10-2018 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Gene3D G3DSA:1.10.287.470 227 301 1.3E-15 T 14-10-2018 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Gene3D G3DSA:1.10.287.470 103 193 6.1E-6 T 14-10-2018 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 1.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Pfam PF13533 Biotin-lipoyl like 78 113 2.2E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_23261 7e4fc6f7a3a2afb4300d6aeda7531d8d 446 Pfam PF13437 HlyD family secretion protein 302 404 4.5E-16 T 14-10-2018 VEJY3_20031 6825a0bfa84a27b3d77e9c4b34c9d444 189 Pfam PF04264 YceI-like domain 25 183 6.8E-36 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VEJY3_20031 6825a0bfa84a27b3d77e9c4b34c9d444 189 SMART SM00867 24 187 4.4E-62 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VEJY3_20031 6825a0bfa84a27b3d77e9c4b34c9d444 189 Gene3D G3DSA:2.40.128.110 23 189 3.6E-49 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VEJY3_20031 6825a0bfa84a27b3d77e9c4b34c9d444 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 45.105 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI VEJY3_20031 6825a0bfa84a27b3d77e9c4b34c9d444 189 SUPERFAMILY SSF101874 22 188 3.01E-49 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VEJY3_15976 119d388c59f350bdf5d3ada9d89db9fc 446 Pfam PF01554 MatE 19 179 2.6E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_15976 119d388c59f350bdf5d3ada9d89db9fc 446 Pfam PF01554 MatE 247 404 1.0E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_15976 119d388c59f350bdf5d3ada9d89db9fc 446 PIRSF PIRSF006603 2 446 3.9E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 Gene3D G3DSA:1.10.3860.10 1 422 9.6E-138 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 2.6E-129 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 3.3E-51 T 14-10-2018 VEJY3_23681 2ab00c30832fc6bee7cdb357325ef751 434 SUPERFAMILY SSF118215 9 407 4.32E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_08850 8bdf8abc0885400d9181c8b4bbaadd4e 228 Pfam PF14234 Domain of unknown function (DUF4336) 7 146 1.2E-14 T 14-10-2018 IPR025638 Protein of unknown function DUF4336 VEJY3_08850 8bdf8abc0885400d9181c8b4bbaadd4e 228 SUPERFAMILY SSF56281 3 226 3.58E-16 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.237 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.3E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 SUPERFAMILY SSF81301 2 119 5.12E-31 T 14-10-2018 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 SUPERFAMILY SSF81891 120 400 5.36E-56 T 14-10-2018 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Pfam PF01743 Poly A polymerase head domain 3 122 5.5E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Gene3D G3DSA:3.30.460.10 1 121 2.9E-29 T 14-10-2018 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.824 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Gene3D G3DSA:1.10.3090.10 122 403 3.5E-44 T 14-10-2018 VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 Pfam PF01966 HD domain 231 322 4.9E-8 T 14-10-2018 IPR006674 HD domain VEJY3_01865 1fb36fdcc68f2d05db7303a89285c448 406 PIRSF PIRSF000813 1 406 4.0E-203 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.6 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 3.8E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 Gene3D G3DSA:3.30.1360.80 1 172 1.3E-73 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PIRSF PIRSF006160 1 162 2.9E-67 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.4E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.4E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.4E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.4E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.4E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 9.0E-79 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_13095 c6411626ecfdb361f84fdfeb7d4e431f 172 SUPERFAMILY SSF63411 4 162 8.7E-67 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.284 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 SUPERFAMILY SSF54768 108 222 5.19E-29 T 14-10-2018 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 Gene3D G3DSA:1.10.1520.10 2 147 6.0E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 SUPERFAMILY SSF69065 5 158 1.92E-50 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 SMART SM00358 155 223 1.4E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VEJY3_13265 dacc861d885066974f322ff1accc369e 225 Gene3D G3DSA:3.30.160.20 153 224 3.7E-20 T 14-10-2018 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 Pfam PF14622 Ribonuclease-III-like 18 140 2.6E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 SMART SM00535 20 148 7.2E-56 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEJY3_13265 dacc861d885066974f322ff1accc369e 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 190 4.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 4.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 PRINTS PR00723 Subtilisin serine protease family (S8) signature 472 488 4.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 SUPERFAMILY SSF52743 124 533 1.7E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 Pfam PF00082 Subtilase family 463 523 3.7E-12 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 Pfam PF00082 Subtilase family 142 310 4.3E-22 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 Gene3D G3DSA:3.40.50.200 142 530 1.6E-114 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 181 191 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 Gene3D G3DSA:3.50.30.30 348 465 1.6E-114 T 14-10-2018 VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 473 483 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_02935 3992c19939d3eea7ce7baddd8a355ce5 625 Pfam PF02225 PA domain 386 448 2.4E-9 T 14-10-2018 IPR003137 PA domain VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 269 4.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Gene3D G3DSA:1.10.287.130 179 269 5.6E-7 T 14-10-2018 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Gene3D G3DSA:3.40.50.2300 571 696 6.6E-34 T 14-10-2018 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 SMART SM00387 317 425 1.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 SUPERFAMILY SSF55874 262 427 1.02E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 SMART SM00448 578 692 4.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 5.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Gene3D G3DSA:3.30.565.10 270 423 4.1E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 SUPERFAMILY SSF47384 184 224 7.26E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 SUPERFAMILY SSF52172 577 695 2.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19121 e0c07ab9c2c1935c470856cdc935158a 696 Pfam PF00072 Response regulator receiver domain 580 692 3.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 SMART SM00490 264 345 2.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 Pfam PF00271 Helicase conserved C-terminal domain 240 345 1.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 SMART SM00487 24 227 2.5E-52 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 Pfam PF00270 DEAD/DEAH box helicase 29 199 3.5E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 Gene3D G3DSA:3.40.50.300 1 216 1.9E-73 T 14-10-2018 VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 SUPERFAMILY SSF52540 77 363 5.94E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 Gene3D G3DSA:3.40.50.300 218 431 1.5E-50 T 14-10-2018 VEJY3_23346 90761c2abb5c979e66d2846c3d0caeb1 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 SUPERFAMILY SSF55021 377 449 2.68E-15 T 14-10-2018 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 PIRSF PIRSF000726 2 450 5.3E-131 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 SUPERFAMILY SSF53633 6 293 6.15E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 SUPERFAMILY SSF55021 297 394 7.64E-20 T 14-10-2018 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 Pfam PF00696 Amino acid kinase family 6 278 2.2E-49 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 Gene3D G3DSA:1.20.120.1320 42 135 1.2E-101 T 14-10-2018 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 Gene3D G3DSA:3.30.70.260 310 379 5.4E-29 T 14-10-2018 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 Gene3D G3DSA:3.30.70.260 380 450 8.7E-18 T 14-10-2018 VEJY3_13915 2373cb90d92bde8037aa2ebf1fc4e16c 450 Gene3D G3DSA:3.40.1160.10 6 290 1.2E-101 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 Gene3D G3DSA:3.40.30.10 1 82 8.3E-34 T 14-10-2018 VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 188 6.1E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 Gene3D G3DSA:1.20.1050.10 84 198 3.6E-30 T 14-10-2018 VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 3.8E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 SUPERFAMILY SSF52833 1 78 1.02E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_23176 89e67cafd37b546f6aab2fd379aa8866 205 SUPERFAMILY SSF47616 72 198 1.25E-18 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 SUPERFAMILY SSF53807 12 477 6.75E-160 T 14-10-2018 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 Gene3D G3DSA:3.40.50.1980 61 203 8.6E-217 T 14-10-2018 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 Gene3D G3DSA:3.40.50.1980 26 472 8.6E-217 T 14-10-2018 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 Gene3D G3DSA:3.40.50.1980 204 342 8.6E-217 T 14-10-2018 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 79 86 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_18701 9691a40c7b95b2bcac0188a8b9daaf28 488 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 60 464 5.4E-113 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 Gene3D G3DSA:3.20.20.70 274 589 8.1E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PIRSF PIRSF005536 1 700 1.2E-226 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 Gene3D G3DSA:2.70.98.60 1 273 3.0E-52 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 22 244 3.2E-47 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 Pfam PF02065 Melibiase 254 591 2.6E-120 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 2.7E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09135 a857247cd9778d84200ce6c95083c322 700 SUPERFAMILY SSF51445 289 611 2.41E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_14930 306c5e6825e918f56c5182cb01b63029 224 SUPERFAMILY SSF52540 1 220 8.2E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14930 306c5e6825e918f56c5182cb01b63029 224 Gene3D G3DSA:3.40.50.300 1 223 1.9E-60 T 14-10-2018 VEJY3_14930 306c5e6825e918f56c5182cb01b63029 224 SMART SM00382 27 214 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_14930 306c5e6825e918f56c5182cb01b63029 224 Pfam PF00005 ABC transporter 18 165 2.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_14930 306c5e6825e918f56c5182cb01b63029 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Pfam PF00675 Insulinase (Peptidase family M16) 61 173 1.1E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Pfam PF00675 Insulinase (Peptidase family M16) 534 639 6.7E-10 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Gene3D G3DSA:3.30.830.10 733 928 7.1E-37 T 14-10-2018 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 SUPERFAMILY SSF63411 513 715 3.51E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Pfam PF05193 Peptidase M16 inactive domain 680 853 1.5E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Pfam PF05193 Peptidase M16 inactive domain 213 386 1.8E-28 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 SUPERFAMILY SSF63411 43 259 1.5E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Gene3D G3DSA:3.30.830.10 519 724 9.4E-41 T 14-10-2018 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Gene3D G3DSA:3.30.830.10 41 264 4.7E-66 T 14-10-2018 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 SUPERFAMILY SSF63411 268 462 5.9E-30 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 Gene3D G3DSA:3.30.830.10 269 466 3.3E-30 T 14-10-2018 VEJY3_13110 722e85a8b9e56ec0cc51e1d905aa77ee 945 SUPERFAMILY SSF63411 733 934 9.09E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Pfam PF00563 EAL domain 411 635 4.0E-39 T 14-10-2018 IPR001633 EAL domain VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Gene3D G3DSA:3.30.70.270 223 391 3.1E-20 T 14-10-2018 VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 SMART SM00267 226 392 3.5E-11 T 14-10-2018 IPR000160 GGDEF domain VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 SUPERFAMILY SSF141868 411 636 2.48E-41 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 SMART SM00052 403 635 1.8E-10 T 14-10-2018 IPR001633 EAL domain VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Gene3D G3DSA:3.20.20.450 401 636 1.9E-40 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 SUPERFAMILY SSF55073 243 390 1.1E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 9.5E-13 T 14-10-2018 IPR000160 GGDEF domain VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Gene3D G3DSA:3.30.1040.50 102 151 4.4E-18 T 14-10-2018 VEJY3_24336 7044ec044c417f57fadf4c2bfe1383ff 637 Pfam PF16448 LapD/MoxY periplasmic domain 24 146 1.2E-39 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 Pfam PF01979 Amidohydrolase family 125 455 5.2E-82 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 3.8E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 3.8E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 3.8E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 3.8E-35 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.4E-54 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 Gene3D G3DSA:3.20.20.140 129 568 4.4E-300 T 14-10-2018 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 SUPERFAMILY SSF51556 130 568 2.19E-201 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 Hamap MF_01953 Urease subunit alpha [ureC]. 2 568 57.161 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 Gene3D G3DSA:2.30.40.10 4 481 4.4E-300 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 ProSitePatterns PS00145 Urease active site. 317 333 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 SUPERFAMILY SSF51338 1 177 3.3E-62 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_06880 232c161ce1b843dd211d9b856dd30fed 568 SUPERFAMILY SSF51338 424 478 6.26E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 14-10-2018 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 SMART SM00984 300 387 6.7E-15 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Gene3D G3DSA:3.40.50.720 222 388 3.9E-69 T 14-10-2018 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.4E-8 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 SUPERFAMILY SSF51735 1 194 9.38E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Gene3D G3DSA:3.40.50.720 1 193 2.5E-59 T 14-10-2018 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 SUPERFAMILY SSF48179 191 287 7.14E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 SUPERFAMILY SSF52413 283 387 1.96E-28 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 PIRSF PIRSF000124 1 388 1.2E-138 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.5E-27 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.6E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 PIRSF PIRSF500134 1 343 1.4E-122 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VEJY3_01175 1a1bc75de5f57760c2f16d864566cead 388 PIRSF PIRSF500134 338 388 0.0038 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 SUPERFAMILY SSF52540 197 372 7.56E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.141 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 PIRSF PIRSF006809 3 423 4.9E-150 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 SUPERFAMILY SSF54980 364 428 4.68E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Gene3D G3DSA:3.40.50.300 197 371 1.4E-42 T 14-10-2018 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Gene3D G3DSA:3.40.50.11060 18 138 6.5E-37 T 14-10-2018 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_14350 3d33f1fbd5e1e3a6bf98941c700445e6 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 5.4E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal VEJY3_13050 7bb4c1fa0d651dc33a922974f7d67167 246 SUPERFAMILY SSF160950 1 245 4.84E-93 T 14-10-2018 IPR036268 ZapD domain superfamily VEJY3_13050 7bb4c1fa0d651dc33a922974f7d67167 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.009 T 14-10-2018 IPR009777 Cell division protein ZapD VEJY3_13050 7bb4c1fa0d651dc33a922974f7d67167 246 Gene3D G3DSA:1.10.3900.10 12 178 1.6E-88 T 14-10-2018 VEJY3_13050 7bb4c1fa0d651dc33a922974f7d67167 246 Pfam PF07072 Cell division protein 18 224 9.3E-76 T 14-10-2018 IPR009777 Cell division protein ZapD VEJY3_13050 7bb4c1fa0d651dc33a922974f7d67167 246 Gene3D G3DSA:2.60.440.10 6 245 1.6E-88 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 SMART SM00116 320 368 1.0E-5 T 14-10-2018 IPR000644 CBS domain VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 SMART SM00116 418 465 43.0 T 14-10-2018 IPR000644 CBS domain VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 SUPERFAMILY SSF54631 312 465 1.94E-18 T 14-10-2018 VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 Pfam PF00571 CBS domain 313 364 1.8E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 Pfam PF01226 Formate/nitrite transporter 17 277 3.5E-69 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 Gene3D G3DSA:1.20.1080.10 4 270 7.1E-86 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEJY3_20026 c38bcef6642fb19abd5fb22e70fc17b1 483 Gene3D G3DSA:3.10.580.10 308 467 1.6E-22 T 14-10-2018 VEJY3_19036 fe5016dfa6d27463ca5e9fc19e4a9db8 430 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 192 429 5.0E-10 T 14-10-2018 VEJY3_19036 fe5016dfa6d27463ca5e9fc19e4a9db8 430 Pfam PF13186 Iron-sulfur cluster-binding domain 315 375 6.0E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VEJY3_19036 fe5016dfa6d27463ca5e9fc19e4a9db8 430 Gene3D G3DSA:3.20.20.70 29 424 5.3E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_19036 fe5016dfa6d27463ca5e9fc19e4a9db8 430 Pfam PF04055 Radical SAM superfamily 41 209 3.9E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_19036 fe5016dfa6d27463ca5e9fc19e4a9db8 430 SUPERFAMILY SSF102114 41 384 4.19E-42 T 14-10-2018 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 SUPERFAMILY SSF53850 26 332 2.04E-85 T 14-10-2018 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 Gene3D G3DSA:3.40.190.10 31 310 7.6E-108 T 14-10-2018 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.7E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 Gene3D G3DSA:3.40.190.10 131 315 7.6E-108 T 14-10-2018 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07290 3d882eff48dfdbabe326ec474595b2dc 343 PIRSF PIRSF019574 1 343 7.3E-109 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_21196 8a643ffd373bb7a38d4f1605f20363b8 311 SUPERFAMILY SSF52402 151 309 2.43E-20 T 14-10-2018 VEJY3_21196 8a643ffd373bb7a38d4f1605f20363b8 311 Pfam PF00582 Universal stress protein family 151 300 1.4E-12 T 14-10-2018 IPR006016 UspA VEJY3_21196 8a643ffd373bb7a38d4f1605f20363b8 311 SUPERFAMILY SSF52402 1 142 4.1E-9 T 14-10-2018 VEJY3_21196 8a643ffd373bb7a38d4f1605f20363b8 311 Gene3D G3DSA:3.40.50.12370 1 311 3.5E-83 T 14-10-2018 VEJY3_10450 aed56f4907205a8fbf485359ece1078b 857 SUPERFAMILY SSF56059 61 481 5.3E-20 T 14-10-2018 VEJY3_10450 aed56f4907205a8fbf485359ece1078b 857 Pfam PF14403 Circularly permuted ATP-grasp type 2 93 468 1.3E-145 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 VEJY3_10450 aed56f4907205a8fbf485359ece1078b 857 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 517 839 5.3E-60 T 14-10-2018 IPR007296 Domain of unknown function DUF403 VEJY3_10450 aed56f4907205a8fbf485359ece1078b 857 Gene3D G3DSA:3.40.50.11290 231 328 2.3E-39 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 1.5E-67 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 Gene3D G3DSA:3.60.20.40 411 588 5.3E-59 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 Gene3D G3DSA:1.10.246.130 286 410 1.2E-38 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 2.2E-139 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 4.6E-162 T 14-10-2018 VEJY3_15170 6ac7dd7d0799723b37653269a02514eb 588 SUPERFAMILY SSF56235 46 587 1.22E-174 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 Gene3D G3DSA:3.40.605.10 18 465 8.6E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 Gene3D G3DSA:3.40.309.10 255 442 8.6E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 Pfam PF00171 Aldehyde dehydrogenase family 17 469 2.8E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_22286 be0c958ca03a689f09532c00c8eaaf06 475 SUPERFAMILY SSF53720 16 473 8.9E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_12950 3f16d1b12b44c3c22ca7d1f311604a73 161 SUPERFAMILY SSF55083 1 159 1.44E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_12950 3f16d1b12b44c3c22ca7d1f311604a73 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 6.9E-39 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_12950 3f16d1b12b44c3c22ca7d1f311604a73 161 Gene3D G3DSA:3.30.70.560 1 159 1.6E-60 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_12950 3f16d1b12b44c3c22ca7d1f311604a73 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 2.0E-135 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SUPERFAMILY SSF50249 319 401 5.48E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SUPERFAMILY SSF52113 596 669 2.8E-18 T 14-10-2018 IPR036420 BRCT domain superfamily VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SMART SM00532 4 449 3.3E-280 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 668 3.3E-14 T 14-10-2018 IPR001357 BRCT domain VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:3.30.470.90 70 318 2.8E-103 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:1.10.287.610 2 69 1.6E-28 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:2.20.70.80 392 432 1.2E-19 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SUPERFAMILY SSF47781 404 585 7.04E-60 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.828 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:1.10.150.20 433 505 4.4E-29 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:1.10.150.20 507 583 3.9E-29 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 9.9E-36 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF14520 Helix-hairpin-helix domain 447 502 1.1E-5 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 PIRSF PIRSF001604 1 670 3.0E-256 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SMART SM00292 595 670 2.6E-11 T 14-10-2018 IPR001357 BRCT domain VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 2.0E-22 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 5.4E-11 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:2.40.50.140 319 391 1.3E-34 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 Gene3D G3DSA:3.40.50.10190 584 670 9.9E-27 T 14-10-2018 IPR036420 BRCT domain superfamily VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SUPERFAMILY SSF56091 5 317 3.2E-125 T 14-10-2018 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SMART SM00278 447 466 95.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SMART SM00278 481 500 5.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_03635 53d4a6e2f1eda9b5080f1af77c5287b7 670 SMART SM00278 545 564 840.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Gene3D G3DSA:3.40.50.300 5 202 2.1E-68 T 14-10-2018 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.8E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 SUPERFAMILY SSF52540 5 211 2.18E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Gene3D G3DSA:3.30.70.240 393 486 6.9E-130 T 14-10-2018 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.2E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Gene3D G3DSA:3.30.70.870 310 594 6.9E-130 T 14-10-2018 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 SUPERFAMILY SSF50447 155 303 5.2E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 SUPERFAMILY SSF54980 402 516 2.06E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 7.6E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Gene3D G3DSA:2.40.30.10 203 303 3.2E-33 T 14-10-2018 VEJY3_00555 9a2b0a10eac956813db545b21ed21c11 609 Gene3D G3DSA:2.40.50.250 487 603 6.9E-130 T 14-10-2018 VEJY3_02610 2797a7dfebcf2adb90d82dfc637f7ab7 321 Gene3D G3DSA:3.40.190.10 39 309 1.6E-96 T 14-10-2018 VEJY3_02610 2797a7dfebcf2adb90d82dfc637f7ab7 321 Pfam PF12849 PBP superfamily domain 36 293 8.7E-30 T 14-10-2018 IPR024370 PBP domain VEJY3_02610 2797a7dfebcf2adb90d82dfc637f7ab7 321 Gene3D G3DSA:3.40.190.10 123 265 1.6E-96 T 14-10-2018 VEJY3_02610 2797a7dfebcf2adb90d82dfc637f7ab7 321 SUPERFAMILY SSF53850 40 319 1.0E-64 T 14-10-2018 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 SMART SM01192 139 425 1.2E-137 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 Gene3D G3DSA:3.30.390.10 1 126 2.5E-47 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 SUPERFAMILY SSF54826 1 135 3.39E-48 T 14-10-2018 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 SUPERFAMILY SSF51604 140 423 3.25E-97 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 Pfam PF03952 Enolase, N-terminal domain 3 132 6.2E-50 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PIRSF PIRSF001400 1 425 1.7E-151 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 SMART SM01193 3 133 1.3E-72 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 161 174 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 334 348 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 106 122 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 36 50 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 311 322 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 PRINTS PR00148 Enolase signature 363 380 1.3E-37 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 Gene3D G3DSA:3.20.20.120 127 430 6.2E-106 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 Hamap MF_00318 Enolase [eno]. 1 411 37.731 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09300 957d1effc516d216be386fb044ffe69b 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 1.2E-89 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_09205 a85d3ebf20fb02010e75d338b02a9b19 64 Pfam PF13333 Integrase core domain 2 55 2.7E-5 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 Gene3D G3DSA:3.90.226.10 94 314 9.8E-163 T 14-10-2018 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 Pfam PF01343 Peptidase family S49 391 541 2.8E-46 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 Pfam PF01343 Peptidase family S49 138 294 1.4E-29 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 SUPERFAMILY SSF52096 315 529 1.24E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 SUPERFAMILY SSF52096 48 284 1.99E-27 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 Gene3D G3DSA:3.90.226.10 315 540 9.8E-163 T 14-10-2018 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 PIRSF PIRSF001217 8 616 2.3E-226 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VEJY3_11130 57e2446c736388862b4edd1e1ed3b697 616 Gene3D G3DSA:3.40.1750.10 186 497 9.8E-163 T 14-10-2018 VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 4.1E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.5E-61 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.861 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 Gene3D G3DSA:2.30.30.20 101 153 1.5E-24 T 14-10-2018 VEJY3_13620 5918d06e58ff6a5dc39564b8807b159f 153 SUPERFAMILY SSF57825 101 151 8.63E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Gene3D G3DSA:1.10.520.10 432 722 4.7E-143 T 14-10-2018 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 SUPERFAMILY SSF48113 431 722 2.06E-107 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 1.8E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00458 Haem peroxidase superfamily signature 317 332 1.8E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 1.8E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 1.8E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00458 Haem peroxidase superfamily signature 258 273 1.8E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Gene3D G3DSA:1.10.420.20 190 398 2.8E-216 T 14-10-2018 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Hamap MF_01961 Catalase-peroxidase [katG]. 6 723 39.421 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 3.5E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 3.5E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 477 503 3.5E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 266 289 3.5E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 3.5E-50 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Gene3D G3DSA:1.10.420.10 577 698 4.7E-143 T 14-10-2018 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 SUPERFAMILY SSF48113 17 430 4.27E-151 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Pfam PF00141 Peroxidase 76 397 3.7E-52 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Pfam PF00141 Peroxidase 405 697 2.3E-33 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_24006 a07885a4b0ce22ea94cc7198cb404064 723 Gene3D G3DSA:1.10.520.10 21 431 2.8E-216 T 14-10-2018 VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 SUPERFAMILY SSF53850 89 287 5.97E-37 T 14-10-2018 VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 Gene3D G3DSA:3.40.190.290 90 290 1.2E-71 T 14-10-2018 VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 Pfam PF03466 LysR substrate binding domain 88 286 6.6E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_11245 7d014b1e25d7dfc61f7cecb30fd3bdf8 291 SUPERFAMILY SSF46785 1 83 1.27E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 SUPERFAMILY SSF55874 5 215 1.72E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 SMART SM00387 27 173 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Gene3D G3DSA:3.30.230.10 216 389 1.6E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Gene3D G3DSA:3.30.565.10 2 215 1.3E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Gene3D G3DSA:3.40.50.670 390 621 1.2E-92 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Pfam PF01751 Toprim domain 413 521 1.2E-11 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 3.1E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 SUPERFAMILY SSF54211 217 382 4.93E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.7E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 SUPERFAMILY SSF56719 388 619 8.63E-80 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 SMART SM00433 34 622 9.4E-215 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-57 T 14-10-2018 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Pfam PF00204 DNA gyrase B 218 384 7.6E-43 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_01945 32b699c31f9fd303ffce57b34be8fa7b 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.974 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 14-10-2018 IPR005824 KOW VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_14790 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 14-10-2018 IPR005824 KOW VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.7E-53 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.8E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 PIRSF PIRSF006092 1 157 2.2E-47 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.8E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 Gene3D G3DSA:1.10.287.180 1 74 7.0E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.163 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 SUPERFAMILY SSF46557 2 75 1.05E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 SUPERFAMILY SSF54534 81 156 6.67E-24 T 14-10-2018 VEJY3_12740 411c126ce3585f34c4cecba069ab1a6e 157 Gene3D G3DSA:3.10.50.30 75 157 6.6E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_17311 f73e1a4712823e8076e7cb32ebef173a 79 Gene3D G3DSA:1.20.58.660 11 79 2.5E-14 T 14-10-2018 VEJY3_17311 f73e1a4712823e8076e7cb32ebef173a 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 7.7E-10 T 14-10-2018 IPR007420 Protein of unknown function DUF465 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 8.3E-64 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 SUPERFAMILY SSF52540 2 180 7.42E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 Gene3D G3DSA:3.40.50.300 3 167 1.1E-49 T 14-10-2018 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 SUPERFAMILY SSF48019 208 319 1.0E-14 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 Gene3D G3DSA:1.20.272.10 216 320 2.1E-5 T 14-10-2018 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 5.9E-21 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10655 bf714c329f12b4ac99666f8c5ea63694 320 Pfam PF13177 DNA polymerase III, delta subunit 12 164 3.8E-44 T 14-10-2018 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 Gene3D G3DSA:2.40.50.140 2 69 4.7E-28 T 14-10-2018 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 SUPERFAMILY SSF50249 3 69 2.42E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 PIRSF PIRSF002599 1 70 3.3E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.2E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_22896 fec89e3d343c79c3ed28a970dd797360 70 SMART SM00357 6 70 1.6E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_00725 f193e11e0a796e65ab8e21304559d44e 462 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 1.9E-131 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 VEJY3_00725 f193e11e0a796e65ab8e21304559d44e 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEJY3_00725 f193e11e0a796e65ab8e21304559d44e 462 Pfam PF00860 Permease family 22 414 1.5E-99 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEJY3_00725 f193e11e0a796e65ab8e21304559d44e 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 3.3E-128 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Gene3D G3DSA:3.90.10.10 249 325 4.8E-5 T 14-10-2018 VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 163 195 6.5E-5 T 14-10-2018 IPR010177 Doubled CXXCH motif VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 206 246 4.7E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 253 288 1.0E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 92 149 3.0E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 SUPERFAMILY SSF48695 63 312 5.76E-49 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Gene3D G3DSA:1.10.1130.10 34 159 1.9E-8 T 14-10-2018 VEJY3_05890 7240abcadfa0ab036b4fb731e4507c33 328 Gene3D G3DSA:1.10.1130.10 160 248 1.2E-6 T 14-10-2018 VEJY3_18756 0c96487fca746ea7520208734bfe22c3 97 Pfam PF03206 Nitrogen fixation protein NifW 9 75 1.0E-9 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 VEJY3_16101 ecf87fea684c5d7c2703ea73b0fac70d 377 Pfam PF12706 Beta-lactamase superfamily domain 113 314 5.0E-41 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_16101 ecf87fea684c5d7c2703ea73b0fac70d 377 SUPERFAMILY SSF56281 95 350 2.22E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_16101 ecf87fea684c5d7c2703ea73b0fac70d 377 Gene3D G3DSA:3.60.15.10 83 373 6.9E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 Gene3D G3DSA:3.40.190.10 171 277 7.2E-34 T 14-10-2018 VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 Gene3D G3DSA:1.10.10.10 1 87 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 SUPERFAMILY SSF46785 4 84 2.9E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 Pfam PF03466 LysR substrate binding domain 95 304 1.8E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 Gene3D G3DSA:3.40.190.10 89 301 7.2E-34 T 14-10-2018 VEJY3_23816 21bdda7039236345cf6cdb2790efc996 312 SUPERFAMILY SSF53850 89 305 9.05E-29 T 14-10-2018 VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 Pfam PF07883 Cupin domain 147 204 5.0E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 SUPERFAMILY SSF47413 26 90 1.64E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 Gene3D G3DSA:2.60.120.10 94 205 3.1E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 SMART SM00530 31 86 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 Gene3D G3DSA:1.10.260.40 26 93 2.5E-15 T 14-10-2018 VEJY3_20201 6c1b3fa562373beb9c5d9cbe4df96d3c 207 SUPERFAMILY SSF51182 97 204 1.27E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_07640 32033ac4dd4edf9776affa20568b6751 415 Pfam PF04403 Paraquat-inducible protein A 248 403 4.4E-47 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEJY3_07640 32033ac4dd4edf9776affa20568b6751 415 Pfam PF04403 Paraquat-inducible protein A 54 205 1.1E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEJY3_07640 32033ac4dd4edf9776affa20568b6751 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 8.5E-106 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 8.6E-146 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 PIRSF PIRSF006078 1 377 2.8E-132 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 Pfam PF02595 Glycerate kinase family 3 372 1.1E-138 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 SUPERFAMILY SSF110738 1 375 6.02E-128 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 Gene3D G3DSA:3.90.1510.10 42 276 1.7E-132 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VEJY3_09120 b25d9483a44127d3b8a358b1a9cb815d 379 Gene3D G3DSA:3.40.50.10350 1 361 1.7E-132 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VEJY3_07590 f85f35f00584e462d51c1deb5627a7cb 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 37.133 T 14-10-2018 IPR009809 Cell division protein ZapC VEJY3_07590 f85f35f00584e462d51c1deb5627a7cb 180 PIRSF PIRSF010252 1 178 5.9E-73 T 14-10-2018 IPR009809 Cell division protein ZapC VEJY3_07590 f85f35f00584e462d51c1deb5627a7cb 180 Pfam PF07126 Cell-division protein ZapC 1 168 2.4E-66 T 14-10-2018 IPR009809 Cell division protein ZapC VEJY3_14480 b5161c523dacf68dd123547e6c3519e4 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 3.5E-38 T 14-10-2018 IPR001107 Band 7 domain VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 SUPERFAMILY SSF50715 340 548 1.26E-80 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Gene3D G3DSA:2.40.240.10 340 547 1.8E-83 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Gene3D G3DSA:3.40.50.620 30 247 1.1E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.357 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Gene3D G3DSA:3.90.800.10 101 209 1.1E-105 T 14-10-2018 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Gene3D G3DSA:1.10.1160.10 261 339 2.0E-36 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.7E-64 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.7E-126 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 SUPERFAMILY SSF52374 11 337 6.22E-103 T 14-10-2018 VEJY3_03780 9d60f0c3ba62f78d9c5ba9843092610e 556 Gene3D G3DSA:2.40.240.10 348 466 1.8E-83 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 Gene3D G3DSA:3.40.50.1820 12 642 3.9E-245 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 SUPERFAMILY SSF50993 1 408 1.96E-92 T 14-10-2018 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 Gene3D G3DSA:2.130.10.120 70 403 3.9E-245 T 14-10-2018 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 Pfam PF00326 Prolyl oligopeptidase family 459 673 3.0E-69 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 SUPERFAMILY SSF53474 411 653 3.49E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 2.2E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 1.8E-119 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEJY3_23456 dc2f52c0ec82dca9d76ecad80595d5a7 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VEJY3_18451 119473254db1234557903287a5688200 437 SUPERFAMILY SSF81296 322 435 1.33E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_18451 119473254db1234557903287a5688200 437 SUPERFAMILY SSF56524 78 317 1.83E-67 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 Gene3D G3DSA:3.90.420.10 71 319 7.1E-74 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 319 433 1.2E-19 T 14-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 Gene3D G3DSA:2.60.40.650 322 436 7.2E-33 T 14-10-2018 VEJY3_18451 119473254db1234557903287a5688200 437 Pfam PF00174 Oxidoreductase molybdopterin binding domain 124 291 2.5E-49 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 35 55 3.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 416 429 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 239 255 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 86 100 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 320 332 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 106 122 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 184 199 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 256 269 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 358 370 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_18451 119473254db1234557903287a5688200 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 272 285 2.3E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 VEJY3_10040 796eef7f72a0e92a2afc38d4cfbe684b 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VEJY3_10040 796eef7f72a0e92a2afc38d4cfbe684b 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 5.9E-174 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 SMART SM00478 38 185 6.4E-54 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 PIRSF PIRSF001435 1 211 3.4E-50 T 14-10-2018 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.4E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 SMART SM00525 186 206 6.5E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 SUPERFAMILY SSF48150 5 207 1.48E-70 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Gene3D G3DSA:1.10.1670.10 11 203 7.7E-78 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Gene3D G3DSA:1.10.340.30 21 132 7.7E-78 T 14-10-2018 VEJY3_10945 e0d8776344b905446bee69e3ee95de89 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.814 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VEJY3_04310 dea9983d8def7fe233cbb19f73119b17 291 SUPERFAMILY SSF54427 170 290 1.14E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_04310 dea9983d8def7fe233cbb19f73119b17 291 Gene3D G3DSA:3.10.450.240 167 290 5.4E-6 T 14-10-2018 VEJY3_04310 dea9983d8def7fe233cbb19f73119b17 291 SMART SM00978 160 291 9.7E-37 T 14-10-2018 IPR007379 Tim44-like domain VEJY3_04310 dea9983d8def7fe233cbb19f73119b17 291 Pfam PF04280 Tim44-like domain 170 290 2.0E-13 T 14-10-2018 IPR007379 Tim44-like domain VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 SUPERFAMILY SSF54211 2 169 1.25E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 SMART SM00382 210 390 2.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 Gene3D G3DSA:3.40.50.300 187 500 3.7E-55 T 14-10-2018 VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 493 1.8E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 SUPERFAMILY SSF52540 187 501 1.89E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 6.4E-48 T 14-10-2018 VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 2.5E-210 T 14-10-2018 IPR004482 Mg chelatase-related protein VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 Gene3D G3DSA:3.30.230.10 1 167 2.5E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 2.0E-89 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEJY3_15395 e7af14e1c61bc0b1aa1ab66d58df8a8e 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 Gene3D G3DSA:3.40.50.300 1 216 4.8E-73 T 14-10-2018 VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 SMART SM00490 257 338 4.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 Pfam PF00271 Helicase conserved C-terminal domain 233 338 7.0E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 SMART SM00487 20 221 1.2E-59 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 Gene3D G3DSA:3.40.50.300 217 372 3.0E-45 T 14-10-2018 VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 SUPERFAMILY SSF52540 74 359 3.67E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_04110 c636235ae422358c604da85aa83b1e71 409 Pfam PF00270 DEAD/DEAH box helicase 25 194 4.4E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_06295 75a2fc2fb9165a900b3fc81fa0e618e3 188 SUPERFAMILY SSF52113 122 187 9.72E-10 T 14-10-2018 IPR036420 BRCT domain superfamily VEJY3_06295 75a2fc2fb9165a900b3fc81fa0e618e3 188 Gene3D G3DSA:3.40.50.10190 120 188 4.3E-13 T 14-10-2018 IPR036420 BRCT domain superfamily VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 SUPERFAMILY SSF55021 90 176 3.93E-21 T 14-10-2018 VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 Gene3D G3DSA:3.30.70.260 1 85 3.6E-24 T 14-10-2018 VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 PIRSF PIRSF028103 1 178 1.9E-68 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 SUPERFAMILY SSF55021 1 81 2.52E-17 T 14-10-2018 VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 Pfam PF13740 ACT domain 3 78 1.7E-22 T 14-10-2018 VEJY3_11700 80b7ba061cbf214374d21a60099eda41 180 Gene3D G3DSA:3.30.70.260 87 180 1.4E-40 T 14-10-2018 VEJY3_23676 ee0e1f091b196e5cffbd7f02d63cecef 422 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 1.5E-12 T 14-10-2018 IPR014973 Protein of unknown function DUF1835 VEJY3_07380 e99b85fbab3a659b26a540f935048620 393 SMART SM00897 28 222 8.6E-32 T 14-10-2018 IPR013702 FIST domain, N-terminal VEJY3_07380 e99b85fbab3a659b26a540f935048620 393 SMART SM01204 223 370 1.9E-28 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEJY3_07380 e99b85fbab3a659b26a540f935048620 393 Pfam PF10442 FIST C domain 223 369 1.7E-18 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEJY3_07380 e99b85fbab3a659b26a540f935048620 393 Pfam PF08495 FIST N domain 32 221 5.1E-23 T 14-10-2018 IPR013702 FIST domain, N-terminal VEJY3_20191 a09ce2e7a170feefb8ba63834a8f1326 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_20191 a09ce2e7a170feefb8ba63834a8f1326 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_20191 a09ce2e7a170feefb8ba63834a8f1326 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_20191 a09ce2e7a170feefb8ba63834a8f1326 241 SUPERFAMILY SSF46689 9 87 8.21E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20191 a09ce2e7a170feefb8ba63834a8f1326 241 Gene3D G3DSA:1.10.357.10 1 208 4.9E-24 T 14-10-2018 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.19 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Pfam PF03764 Elongation factor G, domain IV 484 603 6.0E-49 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SMART SM00838 605 693 4.8E-57 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SMART SM00889 485 603 3.0E-76 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Gene3D G3DSA:3.30.230.10 489 693 2.3E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 14-10-2018 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SUPERFAMILY SSF54211 484 604 7.08E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.7E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Gene3D G3DSA:3.30.70.240 609 680 2.3E-92 T 14-10-2018 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SUPERFAMILY SSF54980 608 695 2.45E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.5E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 14-10-2018 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Pfam PF00679 Elongation factor G C-terminus 605 692 1.0E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SUPERFAMILY SSF50447 271 409 6.19E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Gene3D G3DSA:2.40.30.10 299 405 9.9E-48 T 14-10-2018 VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 SUPERFAMILY SSF52540 6 288 4.05E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14165 e993a10f62189ab7cc3d184e793cfe68 699 Gene3D G3DSA:3.40.50.300 1 298 3.0E-115 T 14-10-2018 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Gene3D G3DSA:1.20.1270.20 153 235 8.6E-29 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 SUPERFAMILY SSF56821 1 551 2.75E-195 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Gene3D G3DSA:1.20.1270.20 1 143 1.2E-36 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Gene3D G3DSA:3.40.50.2030 237 382 1.1E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 2.7E-225 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.162 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 PIRSF PIRSF000076 1 553 8.0E-244 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Gene3D G3DSA:3.40.50.2030 383 551 6.0E-61 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_05785 a1c4ca304cf90d7bd8a2825b872f554a 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 4.2E-162 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 Pfam PF03466 LysR substrate binding domain 88 292 1.4E-50 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 Gene3D G3DSA:3.40.190.10 163 263 6.4E-71 T 14-10-2018 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 SUPERFAMILY SSF53850 89 294 3.88E-51 T 14-10-2018 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 Gene3D G3DSA:3.40.190.10 92 289 6.4E-71 T 14-10-2018 VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 SUPERFAMILY SSF46785 6 88 2.06E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16501 0bb05d90792226a6311011fcb52502d0 301 Gene3D G3DSA:1.10.10.10 3 91 2.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05840 635c4b1a5f9eecb837229efeee649bb9 92 Pfam PF01386 Ribosomal L25p family 4 89 1.1E-21 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEJY3_05840 635c4b1a5f9eecb837229efeee649bb9 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.42 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEJY3_05840 635c4b1a5f9eecb837229efeee649bb9 92 SUPERFAMILY SSF50715 1 92 7.67E-28 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_05840 635c4b1a5f9eecb837229efeee649bb9 92 Gene3D G3DSA:2.40.240.10 1 92 1.4E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_05840 635c4b1a5f9eecb837229efeee649bb9 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 7.0E-38 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 SUPERFAMILY SSF48498 81 193 1.13E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 Gene3D G3DSA:1.10.357.10 1 194 2.3E-58 T 14-10-2018 VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 7.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 1.6E-7 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VEJY3_23166 dbb63910aa39db3c2095b0daee73eea7 199 SUPERFAMILY SSF46689 2 74 6.67E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_19311 88de6642e273f99a330c27288988d033 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 1.6E-27 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEJY3_19311 88de6642e273f99a330c27288988d033 216 Gene3D G3DSA:1.10.3720.10 5 213 2.9E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19311 88de6642e273f99a330c27288988d033 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 211 5.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_19311 88de6642e273f99a330c27288988d033 216 SUPERFAMILY SSF161098 13 204 1.2E-39 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 7.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 7.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 7.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 Gene3D G3DSA:3.40.50.2300 7 146 1.7E-34 T 14-10-2018 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 2.0E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 SUPERFAMILY SSF46894 148 213 3.74E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 SMART SM00421 154 211 1.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23281 f38403a9ad0313d602c66cd81868d1e7 222 Gene3D G3DSA:1.10.10.10 153 215 9.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01570 0cb157645068c146f0719189eeca939d 145 Pfam PF00582 Universal stress protein family 1 142 1.6E-31 T 14-10-2018 IPR006016 UspA VEJY3_01570 0cb157645068c146f0719189eeca939d 145 PIRSF PIRSF006276 1 145 1.8E-17 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_01570 0cb157645068c146f0719189eeca939d 145 SUPERFAMILY SSF52402 2 143 4.44E-34 T 14-10-2018 VEJY3_01570 0cb157645068c146f0719189eeca939d 145 Gene3D G3DSA:3.40.50.620 1 142 3.9E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_01570 0cb157645068c146f0719189eeca939d 145 PRINTS PR01438 Universal stress protein signature 2 20 7.1E-11 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_01570 0cb157645068c146f0719189eeca939d 145 PRINTS PR01438 Universal stress protein signature 102 114 7.1E-11 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_01570 0cb157645068c146f0719189eeca939d 145 PRINTS PR01438 Universal stress protein signature 120 142 7.1E-11 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_04330 dc8a9ef979fe82baa71c182a256c72c2 364 Gene3D G3DSA:3.40.50.1100 25 324 1.6E-67 T 14-10-2018 VEJY3_04330 dc8a9ef979fe82baa71c182a256c72c2 364 Gene3D G3DSA:3.40.50.1100 51 157 1.6E-67 T 14-10-2018 VEJY3_04330 dc8a9ef979fe82baa71c182a256c72c2 364 SUPERFAMILY SSF53686 23 335 4.58E-71 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_04330 dc8a9ef979fe82baa71c182a256c72c2 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 2.2E-40 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_20321 fe1df73390001843acb08e85317f272c 106 PIRSF PIRSF028139 1 106 5.1E-35 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VEJY3_20321 fe1df73390001843acb08e85317f272c 106 Gene3D G3DSA:3.30.70.1240 1 104 1.6E-24 T 14-10-2018 IPR023389 DOPA-like superfamily VEJY3_20321 fe1df73390001843acb08e85317f272c 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 9.5E-22 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VEJY3_20321 fe1df73390001843acb08e85317f272c 106 SUPERFAMILY SSF143410 1 102 9.81E-29 T 14-10-2018 IPR023389 DOPA-like superfamily VEJY3_07935 c5813fe03e176c4fa0c4e84be514de77 711 Gene3D G3DSA:2.170.130.10 33 167 2.2E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_07935 c5813fe03e176c4fa0c4e84be514de77 711 Gene3D G3DSA:2.40.170.20 168 711 1.8E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_07935 c5813fe03e176c4fa0c4e84be514de77 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 3.9E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_07935 c5813fe03e176c4fa0c4e84be514de77 711 SUPERFAMILY SSF56935 28 711 1.22E-128 T 14-10-2018 VEJY3_07935 c5813fe03e176c4fa0c4e84be514de77 711 Pfam PF00593 TonB dependent receptor 229 710 3.9E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_08000 a7a282d31ddca3b656b3ef3505261e8c 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 319 1.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_08000 a7a282d31ddca3b656b3ef3505261e8c 359 Gene3D G3DSA:1.10.3720.10 132 321 5.6E-37 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_08000 a7a282d31ddca3b656b3ef3505261e8c 359 SUPERFAMILY SSF161098 136 318 1.7E-41 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_14220 01aa4594094f88e6fa14231220110a79 185 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.0E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_14220 01aa4594094f88e6fa14231220110a79 185 SUPERFAMILY SSF54534 2 139 7.86E-34 T 14-10-2018 VEJY3_14220 01aa4594094f88e6fa14231220110a79 185 Gene3D G3DSA:3.10.50.40 3 154 7.7E-58 T 14-10-2018 VEJY3_14220 01aa4594094f88e6fa14231220110a79 185 Gene3D G3DSA:2.40.10.330 71 121 7.7E-58 T 14-10-2018 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 Gene3D G3DSA:1.10.10.10 1 88 8.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 Gene3D G3DSA:3.40.190.10 93 282 4.2E-44 T 14-10-2018 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 SUPERFAMILY SSF53850 89 299 8.45E-27 T 14-10-2018 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 Pfam PF03466 LysR substrate binding domain 88 292 1.7E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 Gene3D G3DSA:3.40.190.10 166 266 4.2E-44 T 14-10-2018 VEJY3_02850 1472ef93420cb9b11094e0e78a5bf50e 301 SUPERFAMILY SSF46785 1 101 3.61E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10895 e61589116b76cbc09143395c83eb27c1 298 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 4.9E-75 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VEJY3_10895 e61589116b76cbc09143395c83eb27c1 298 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.456 T 14-10-2018 IPR010119 Gluconeogenesis factor VEJY3_10895 e61589116b76cbc09143395c83eb27c1 298 Gene3D G3DSA:3.40.50.12300 5 298 3.3E-79 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily VEJY3_10895 e61589116b76cbc09143395c83eb27c1 298 SUPERFAMILY SSF142338 7 291 1.44E-82 T 14-10-2018 VEJY3_16151 207594f9c625f2b94099ee571437c339 376 Gene3D G3DSA:3.40.50.10350 1 362 5.7E-139 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VEJY3_16151 207594f9c625f2b94099ee571437c339 376 Gene3D G3DSA:3.90.1510.10 42 276 5.7E-139 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VEJY3_16151 207594f9c625f2b94099ee571437c339 376 Pfam PF02595 Glycerate kinase family 3 373 1.9E-147 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_16151 207594f9c625f2b94099ee571437c339 376 SUPERFAMILY SSF110738 1 373 6.93E-140 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VEJY3_16151 207594f9c625f2b94099ee571437c339 376 PIRSF PIRSF006078 1 376 8.5E-134 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_17896 eb44809af95f007fee57847023442fe8 372 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 128 6.3E-31 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VEJY3_17896 eb44809af95f007fee57847023442fe8 372 SMART SM00922 147 244 4.9E-16 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEJY3_17896 eb44809af95f007fee57847023442fe8 372 SUPERFAMILY SSF54826 4 129 6.23E-32 T 14-10-2018 VEJY3_17896 eb44809af95f007fee57847023442fe8 372 Gene3D G3DSA:3.30.390.10 31 366 1.8E-112 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_17896 eb44809af95f007fee57847023442fe8 372 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 194 225 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VEJY3_17896 eb44809af95f007fee57847023442fe8 372 SUPERFAMILY SSF51604 116 370 1.7E-59 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_17896 eb44809af95f007fee57847023442fe8 372 Pfam PF13378 Enolase C-terminal domain-like 151 364 1.9E-45 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VEJY3_17896 eb44809af95f007fee57847023442fe8 372 Gene3D G3DSA:3.20.20.120 121 356 1.8E-112 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_17896 eb44809af95f007fee57847023442fe8 372 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 103 128 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VEJY3_11835 c1f64e6548ad34d1cd56a5803a5cdc7f 337 Pfam PF10544 T5orf172 domain 5 92 1.7E-11 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VEJY3_11835 c1f64e6548ad34d1cd56a5803a5cdc7f 337 SMART SM00974 14 93 3.2E-10 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Gene3D G3DSA:2.60.40.1180 592 697 3.6E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 SUPERFAMILY SSF51445 290 623 2.11E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 609 690 5.1E-8 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PIRSF PIRSF005536 1 704 5.0E-230 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Gene3D G3DSA:3.20.20.70 275 591 1.9E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Pfam PF02065 Melibiase 255 594 2.5E-120 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 237 5.4E-45 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 Gene3D G3DSA:2.70.98.60 1 274 5.3E-51 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 ProSitePatterns PS00512 Alpha-galactosidase signature. 324 339 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 257 277 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 504 520 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 295 309 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 206 221 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 479 495 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 323 338 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 431 446 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_21461 e4af86578da29b6070ec4d9cbd10f9d1 705 PRINTS PR00743 Glycosyl hydrolase family 36 signature 373 395 1.3E-55 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 3.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SUPERFAMILY SSF158472 179 230 6.8E-5 T 14-10-2018 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 1.6E-29 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Gene3D G3DSA:3.30.450.170 40 150 7.7E-9 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SMART SM00388 234 298 4.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 453 4.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Gene3D G3DSA:3.30.565.10 312 457 2.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SMART SM00387 343 457 9.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SUPERFAMILY SSF55874 288 455 1.44E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SUPERFAMILY SSF47384 217 297 1.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 Gene3D G3DSA:1.10.287.130 182 299 2.2E-23 T 14-10-2018 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16276 552b6f9a6e764c116cbf3ea8faafdda2 457 SMART SM00304 178 233 1.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_08700 88c484445b237eac33e22809b2599b72 276 SUPERFAMILY SSF103088 148 260 1.28E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_08700 88c484445b237eac33e22809b2599b72 276 Pfam PF00691 OmpA family 160 254 1.0E-21 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_08700 88c484445b237eac33e22809b2599b72 276 Gene3D G3DSA:3.30.1330.60 123 270 1.2E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_08700 88c484445b237eac33e22809b2599b72 276 PRINTS PR01021 OMPA domain signature 190 205 3.2E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_08700 88c484445b237eac33e22809b2599b72 276 PRINTS PR01021 OMPA domain signature 205 221 3.2E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_08700 88c484445b237eac33e22809b2599b72 276 PRINTS PR01021 OMPA domain signature 160 182 3.2E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Gene3D G3DSA:3.30.360.10 611 781 1.2E-103 T 14-10-2018 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 1.7E-15 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Gene3D G3DSA:1.20.120.1320 44 137 3.8E-73 T 14-10-2018 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Gene3D G3DSA:3.40.50.720 451 798 1.2E-103 T 14-10-2018 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Pfam PF00696 Amino acid kinase family 5 274 1.1E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 SUPERFAMILY SSF51735 448 622 3.18E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 SUPERFAMILY SSF53633 5 291 1.44E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Gene3D G3DSA:3.40.1160.10 8 290 3.8E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 PIRSF PIRSF000727 5 802 1.6E-285 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 SUPERFAMILY SSF55347 600 783 7.19E-45 T 14-10-2018 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 Pfam PF00742 Homoserine dehydrogenase 600 795 2.2E-42 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEJY3_14130 a0e0ae42838fd9e04341c3ee191008e9 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 SMART SM00342 176 258 1.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 Gene3D G3DSA:1.10.10.60 156 261 2.4E-23 T 14-10-2018 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 SUPERFAMILY SSF51182 20 185 3.74E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_22981 f3d2e623c47bedeb8ac57e05b95bfbb6 262 SUPERFAMILY SSF46689 213 260 1.08E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Pfam PF13533 Biotin-lipoyl like 47 91 9.3E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:1.10.287.470 111 188 6.9E-16 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 SUPERFAMILY SSF111369 40 258 6.15E-7 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:2.40.30.170 34 44 5.8E-13 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:2.40.30.170 239 322 6.9E-16 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Pfam PF13437 HlyD family secretion protein 208 285 3.9E-6 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:1.10.287.470 79 110 5.8E-13 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:2.40.50.100 45 78 5.8E-13 T 14-10-2018 VEJY3_07960 077ebe5681feb3e861151cd83cf69961 326 Gene3D G3DSA:2.40.50.100 189 238 6.9E-16 T 14-10-2018 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 Gene3D G3DSA:1.20.5.710 2 51 2.0E-22 T 14-10-2018 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 5.0E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.8E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.237 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 SUPERFAMILY SSF48300 4 58 2.35E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 Gene3D G3DSA:3.30.1390.10 52 122 5.4E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 SUPERFAMILY SSF54736 52 122 6.45E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.4E-29 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14770 2cdc4dff050f8271c639f16bd08cf18f 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.8E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SUPERFAMILY SSF51055 997 1054 2.35E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SUPERFAMILY SSF51445 316 787 1.05E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Pfam PF14600 Cellulose-binding domain 1000 1052 2.6E-19 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:2.10.10.20 16 88 9.9E-15 T 14-10-2018 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:3.20.20.80 304 652 2.6E-80 T 14-10-2018 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:2.60.40.10 194 284 5.1E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:2.60.40.10 97 193 4.2E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SUPERFAMILY SSF54556 629 752 2.04E-15 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:3.10.50.10 719 763 1.7E-12 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SMART SM00636 322 782 3.2E-119 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:3.20.20.80 764 787 1.7E-12 T 14-10-2018 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SMART SM00495 1010 1052 9.9E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SMART SM00495 37 82 6.1E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 SUPERFAMILY SSF51055 22 85 3.4E-15 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Pfam PF06483 Chitinase C 810 975 2.2E-73 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Pfam PF00704 Glycosyl hydrolases family 18 323 782 1.5E-86 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VEJY3_20106 42bc56d09b3a782f79cdf9ebde826d7d 1055 Gene3D G3DSA:2.10.10.20 995 1054 7.1E-19 T 14-10-2018 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 Gene3D G3DSA:3.40.50.720 102 240 7.4E-67 T 14-10-2018 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 5 90 8.1E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 Pfam PF00899 ThiF family 120 246 1.3E-10 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 Gene3D G3DSA:3.40.50.10860 5 261 7.4E-67 T 14-10-2018 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 PRINTS PR00086 L-lactate dehydrogenase signature 145 169 6.2E-5 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 PRINTS PR00086 L-lactate dehydrogenase signature 121 145 6.2E-5 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 SUPERFAMILY SSF51735 103 270 2.43E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18086 b35c085004ebb0b17b9f09ae2bd745ce 278 SUPERFAMILY SSF53223 3 102 5.53E-21 T 14-10-2018 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 23 43 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 86 106 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 44 64 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 3 22 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 107 127 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 65 85 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PRINTS PR00601 Bacterioferritin signature 128 149 6.7E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 SUPERFAMILY SSF47240 1 153 7.5E-56 T 14-10-2018 IPR009078 Ferritin-like superfamily VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 Gene3D G3DSA:1.20.1260.10 1 158 8.3E-72 T 14-10-2018 IPR012347 Ferritin-like VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 PIRSF PIRSF002560 1 157 6.0E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEJY3_14150 1596c181d2869f9b6be9c28c836dfa1b 158 Pfam PF00210 Ferritin-like domain 8 143 8.7E-41 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF53850 44 237 7.06E-23 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SMART SM00388 670 735 1.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 277 481 2.8E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 735 5.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:1.20.120.160 1130 1222 8.1E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SMART SM00062 36 247 1.5E-5 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF55874 724 893 2.49E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF47226 1095 1215 2.36E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF53850 272 484 2.27E-14 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.40.190.10 33 236 4.2E-22 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.40.190.10 123 213 4.2E-22 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.40.190.10 357 447 3.3E-21 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF01627 Hpt domain 1138 1218 2.2E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.40.50.2300 995 1129 1.2E-29 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.30.565.10 734 896 2.7E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF47384 655 736 5.3E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SUPERFAMILY SSF52172 999 1127 2.85E-30 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SMART SM00448 998 1112 3.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 SMART SM00387 782 893 2.7E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 832 6.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 846 6.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 6.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 890 6.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:1.10.287.130 640 733 1.5E-20 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 237 8.4E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF00072 Response regulator receiver domain 1000 1111 9.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Gene3D G3DSA:3.40.190.10 271 481 3.3E-21 T 14-10-2018 VEJY3_19131 4e4cc5ada7de56e03891a53e00d724e5 1226 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 892 6.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 SUPERFAMILY SSF52540 75 356 2.75E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 Gene3D G3DSA:3.40.50.300 220 423 6.4E-49 T 14-10-2018 VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 SMART SM00487 20 229 3.2E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 SMART SM00490 258 339 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.2E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_21751 4fcdd98454db98239f46a43f046aa7d0 429 Gene3D G3DSA:3.40.50.300 1 219 1.1E-74 T 14-10-2018 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 Gene3D G3DSA:3.40.50.2300 3 132 1.5E-27 T 14-10-2018 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 SUPERFAMILY SSF46894 138 207 1.94E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 Pfam PF00072 Response regulator receiver domain 7 120 5.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 SMART SM00421 147 204 5.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 SUPERFAMILY SSF52172 4 160 2.13E-27 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 Gene3D G3DSA:1.10.10.10 148 209 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14570 fbac84bb0e395c83c7af30357dcce7b3 209 SMART SM00448 5 119 5.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11610 5a4f4e4dc9fe8b1a4b33104b5488c8a0 137 PIRSF PIRSF039090 1 133 1.9E-42 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEJY3_11610 5a4f4e4dc9fe8b1a4b33104b5488c8a0 137 Pfam PF02561 Flagellar protein FliS 6 122 1.2E-36 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEJY3_11610 5a4f4e4dc9fe8b1a4b33104b5488c8a0 137 Gene3D G3DSA:1.20.120.340 2 126 9.4E-39 T 14-10-2018 VEJY3_11610 5a4f4e4dc9fe8b1a4b33104b5488c8a0 137 SUPERFAMILY SSF101116 6 127 6.15E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 SUPERFAMILY SSF81343 1 127 1.09E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-53 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 PIRSF PIRSF000180 1 127 1.5E-57 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.06 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.0E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEJY3_14470 7aa5e6f5c99d208ff074a3826ab38583 127 Gene3D G3DSA:1.20.1300.10 1 127 1.9E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 Gene3D G3DSA:3.30.1150.10 103 204 8.9E-28 T 14-10-2018 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 2.8E-18 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.8E-18 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.8E-18 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.8E-18 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 SUPERFAMILY SSF74653 118 196 1.2E-24 T 14-10-2018 VEJY3_16306 7d5a2a99da5e7f70bd595a3c67c9468c 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 5.6E-21 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 Gene3D G3DSA:2.40.500.20 83 194 2.2E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.2E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 SUPERFAMILY SSF54719 84 193 2.36E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 PIRSF PIRSF000349 1 194 4.0E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_10985 935321f40c8a430f902ce881c5ca349e 194 Gene3D G3DSA:1.10.287.990 20 82 8.8E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 4.2E-166 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.2090.10 179 270 4.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.70.1430 41 801 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:1.20.1640.10 12 510 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 SUPERFAMILY SSF82714 184 263 1.96E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.70.1430 567 653 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 SUPERFAMILY SSF82866 289 491 3.4E-42 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.70.1320 135 325 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 SUPERFAMILY SSF82866 791 1022 6.02E-50 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 SUPERFAMILY SSF82693 41 133 1.28E-22 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.70.1440 654 852 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:3.30.2090.10 705 793 4.1E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 Gene3D G3DSA:1.20.1640.10 511 1018 4.1E-257 T 14-10-2018 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-30 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_12775 600036405ee1ee1e8e644656b79273fc 1038 SUPERFAMILY SSF82693 147 325 6.28E-12 T 14-10-2018 VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 Pfam PF16884 N-terminal domain of oxidoreductase 5 109 1.7E-39 T 14-10-2018 VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 Pfam PF00107 Zinc-binding dehydrogenase 156 281 6.5E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 SMART SM00829 14 329 3.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 SUPERFAMILY SSF51735 121 297 5.79E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 Gene3D G3DSA:3.90.180.10 9 329 1.7E-129 T 14-10-2018 VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 SUPERFAMILY SSF50129 3 141 6.64E-38 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_19371 0a4682a2c39654126bba600de8aff4f6 331 Gene3D G3DSA:3.40.50.720 124 300 1.7E-129 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SUPERFAMILY SSF53474 1047 1309 6.93E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Pfam PF00975 Thioesterase domain 1067 1299 1.5E-29 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1002 1017 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SUPERFAMILY SSF47336 973 1043 5.37E-18 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SUPERFAMILY SSF52777 14 171 5.34E-33 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Pfam PF00550 Phosphopantetheine attachment site 979 1041 3.3E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 ProSitePatterns PS00455 Putative AMP-binding domain signature. 613 624 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Pfam PF13193 AMP-binding enzyme C-terminal domain 877 953 2.4E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Gene3D G3DSA:3.30.300.30 864 967 3.3E-36 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Pfam PF00501 AMP-binding enzyme 477 869 9.2E-104 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Gene3D G3DSA:3.40.50.1820 968 1310 1.4E-97 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Gene3D G3DSA:3.40.50.12780 456 863 2.5E-139 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Pfam PF00668 Condensation domain 9 425 7.7E-63 T 14-10-2018 IPR001242 Condensation domain VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SUPERFAMILY SSF52777 193 457 1.33E-38 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Gene3D G3DSA:3.30.559.10 14 209 2.8E-48 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SUPERFAMILY SSF56801 433 990 2.35E-167 T 14-10-2018 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 SMART SM00823 Phosphopantetheine attachment site 978 1047 0.0014 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VEJY3_04085 957e5ec0808dc99d71b3053a7c43d881 1315 Gene3D G3DSA:3.30.559.30 210 438 7.1E-61 T 14-10-2018 VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.155 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 Gene3D G3DSA:3.40.50.880 286 543 7.3E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.5E-62 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 SUPERFAMILY SSF52540 3 269 2.75E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 Pfam PF06418 CTP synthase N-terminus 5 265 2.7E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 Gene3D G3DSA:3.40.50.300 1 285 5.6E-133 T 14-10-2018 VEJY3_13220 4fa9c8868c68fec747cdc941e93654b7 546 SUPERFAMILY SSF52317 289 538 1.1E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_14300 1ee0c390744ec74c8030b467e622fdac 228 Gene3D G3DSA:1.10.150.240 21 94 5.8E-66 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_14300 1ee0c390744ec74c8030b467e622fdac 228 Gene3D G3DSA:3.40.50.1000 9 216 5.8E-66 T 14-10-2018 IPR023214 HAD superfamily VEJY3_14300 1ee0c390744ec74c8030b467e622fdac 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 4.8E-39 T 14-10-2018 VEJY3_14300 1ee0c390744ec74c8030b467e622fdac 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.573 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VEJY3_14300 1ee0c390744ec74c8030b467e622fdac 228 SUPERFAMILY SSF56784 5 224 5.43E-62 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 SUPERFAMILY SSF55424 343 466 1.56E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PIRSF PIRSF000350 1 468 3.5E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 Gene3D G3DSA:3.50.50.60 150 271 7.3E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 Gene3D G3DSA:3.50.50.60 9 332 7.3E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 SUPERFAMILY SSF51905 3 337 1.38E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.8E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 5.1E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 Gene3D G3DSA:3.30.390.30 346 467 1.1E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 14-10-2018 VEJY3_12995 c249bd8b2ac364e5f4bb7ea48b1a8576 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 14-10-2018 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.854 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 SUPERFAMILY SSF53335 77 438 3.06E-88 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Pfam PF01938 TRAM domain 17 68 3.2E-8 T 14-10-2018 IPR002792 TRAM domain VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Gene3D G3DSA:3.40.1350.30 135 271 3.1E-117 T 14-10-2018 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 SUPERFAMILY SSF50249 18 74 7.42E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 2.5E-34 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.6E-129 T 14-10-2018 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Gene3D G3DSA:3.40.50.150 89 433 3.1E-117 T 14-10-2018 VEJY3_13235 5efd38398a3b300c67a68b42d89505e5 439 Gene3D G3DSA:2.40.50.140 1 88 2.7E-27 T 14-10-2018 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 131 186 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 Gene3D G3DSA:3.30.450.20 1 101 4.1E-12 T 14-10-2018 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 Gene3D G3DSA:1.10.10.10 125 191 5.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 Pfam PF08448 PAS fold 1 97 1.6E-20 T 14-10-2018 IPR013656 PAS fold-4 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 SUPERFAMILY SSF55785 2 96 1.33E-10 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 174 4.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 132 146 4.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 162 4.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 SMART SM00421 129 186 2.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24306 589bb4f62ad734c48eadc439ef5a3721 212 SUPERFAMILY SSF46894 122 191 1.36E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.1E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.1E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.1E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 SUPERFAMILY SSF53738 301 443 2.28E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 437 1.3E-16 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 SUPERFAMILY SSF53738 203 311 7.46E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Gene3D G3DSA:3.30.310.50 453 555 1.4E-7 T 14-10-2018 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 532 2.5E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Gene3D G3DSA:3.40.120.10 32 183 2.3E-46 T 14-10-2018 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 177 3.8E-41 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Gene3D G3DSA:3.40.120.10 203 321 3.1E-21 T 14-10-2018 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 SUPERFAMILY SSF55957 460 560 2.35E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 SUPERFAMILY SSF53738 28 230 1.73E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 208 309 1.5E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 Gene3D G3DSA:3.40.120.10 322 441 4.3E-28 T 14-10-2018 VEJY3_21971 8fe39e78b483373e2021b3a70468887f 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 SUPERFAMILY SSF55073 89 239 2.04E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 SUPERFAMILY SSF141868 255 502 1.57E-77 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 Gene3D G3DSA:3.30.70.270 79 251 5.7E-47 T 14-10-2018 VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 84 234 1.1E-37 T 14-10-2018 IPR000160 GGDEF domain VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 SMART SM00052 249 494 2.0E-84 T 14-10-2018 IPR001633 EAL domain VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 Gene3D G3DSA:3.20.20.450 252 510 1.1E-82 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 SMART SM00267 73 239 2.9E-40 T 14-10-2018 IPR000160 GGDEF domain VEJY3_21131 d6798f352d570682bcda8ac28d88dd4f 512 Pfam PF00563 EAL domain 256 488 7.1E-66 T 14-10-2018 IPR001633 EAL domain VEJY3_15105 ce65b9d06fe4b866a4feddf5a90a02d0 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 78 2.5E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_15105 ce65b9d06fe4b866a4feddf5a90a02d0 89 SUPERFAMILY SSF54292 1 87 4.59E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_15105 ce65b9d06fe4b866a4feddf5a90a02d0 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_15105 ce65b9d06fe4b866a4feddf5a90a02d0 89 Gene3D G3DSA:3.10.20.30 2 89 1.5E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 223 235 1.4E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 1.4E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 131 145 1.4E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 224 235 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 Gene3D G3DSA:2.40.10.10 28 281 2.3E-52 T 14-10-2018 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 SMART SM00020 34 275 4.3E-50 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 Pfam PF00089 Trypsin 35 275 5.9E-40 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 SUPERFAMILY SSF50494 8 276 4.71E-59 T 14-10-2018 IPR009003 Peptidase S1, PA clan VEJY3_23576 4ce4853dd531074f268f3fc4702106c6 351 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEJY3_21956 f0f286c2e835c004aa68844088925e53 180 PIRSF PIRSF005413 1 180 3.1E-67 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21956 f0f286c2e835c004aa68844088925e53 180 SUPERFAMILY SSF110111 56 175 5.23E-47 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21956 f0f286c2e835c004aa68844088925e53 180 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 1.5E-49 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21956 f0f286c2e835c004aa68844088925e53 180 Gene3D G3DSA:2.60.370.10 56 179 1.8E-43 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 Pfam PF07729 FCD domain 87 209 3.0E-18 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 Gene3D G3DSA:1.20.120.530 80 220 6.0E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 Gene3D G3DSA:1.10.10.10 2 78 2.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 SUPERFAMILY SSF48008 83 215 8.63E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 SMART SM00895 87 210 2.3E-14 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 SMART SM00345 19 77 0.0015 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 4.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16496 e56aa16a722c5e5de989d7dba6bf2fa6 233 SUPERFAMILY SSF46785 13 96 2.48E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.209 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Gene3D G3DSA:1.10.260.30 328 453 8.0E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 SUPERFAMILY SSF52540 42 353 1.99E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 SMART SM00382 99 247 3.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Gene3D G3DSA:3.40.50.300 90 285 6.3E-123 T 14-10-2018 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 SMART SM00962 100 296 1.7E-114 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.0E-73 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 SMART SM00963 1 86 7.8E-37 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Gene3D G3DSA:1.20.120.140 4 305 6.3E-123 T 14-10-2018 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.9E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_13080 e5ca9cc4dbc8fff2b9a0a991ab390824 460 SUPERFAMILY SSF47446 329 430 7.52E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 2.3E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 SUPERFAMILY SSF55653 60 148 9.55E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.118 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.7E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VEJY3_14005 9a41c4f6e270cb70e80a3436d1730d3d 150 Gene3D G3DSA:3.10.430.100 61 149 4.9E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VEJY3_11735 db6fe97e1e930145cf654fe5ad3e818c 154 SUPERFAMILY SSF52833 3 153 1.08E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_11735 db6fe97e1e930145cf654fe5ad3e818c 154 PIRSF PIRSF000239 1 144 1.7E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_11735 db6fe97e1e930145cf654fe5ad3e818c 154 Pfam PF00578 AhpC/TSA family 6 133 1.9E-37 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_11735 db6fe97e1e930145cf654fe5ad3e818c 154 Gene3D G3DSA:3.40.30.10 2 153 5.8E-47 T 14-10-2018 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 Pfam PF03466 LysR substrate binding domain 89 295 1.4E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 SUPERFAMILY SSF53850 89 298 8.87E-27 T 14-10-2018 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 SUPERFAMILY SSF46785 3 85 8.62E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 Gene3D G3DSA:1.10.10.10 6 93 8.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 Gene3D G3DSA:3.40.190.10 163 265 5.4E-35 T 14-10-2018 VEJY3_18801 c9edd0fee4aadf839ab5933d54c22cb7 302 Gene3D G3DSA:3.40.190.10 102 292 5.4E-35 T 14-10-2018 VEJY3_06115 9f01ab3aa81c62b756067211bd6a8907 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 1.0E-11 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 VEJY3_06115 9f01ab3aa81c62b756067211bd6a8907 231 PIRSF PIRSF028111 1 230 3.2E-84 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 SUPERFAMILY SSF55073 162 319 5.02E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 SMART SM00267 146 320 4.9E-45 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 Pfam PF08447 PAS fold 54 140 2.9E-20 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 315 5.4E-37 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 Gene3D G3DSA:3.30.70.270 152 323 7.7E-46 T 14-10-2018 VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 Gene3D G3DSA:3.30.450.20 38 151 1.3E-25 T 14-10-2018 VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 SMART SM00086 103 146 0.003 T 14-10-2018 IPR001610 PAC motif VEJY3_19551 7b3dbc9f9d52fbf96aee55853ee4a202 323 SUPERFAMILY SSF55785 46 148 7.25E-18 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Gene3D G3DSA:1.10.490.10 1 142 4.3E-50 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Gene3D G3DSA:2.40.30.10 149 254 1.7E-33 T 14-10-2018 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Pfam PF00042 Globin 7 102 2.9E-14 T 14-10-2018 IPR000971 Globin GO:0020037 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 SUPERFAMILY SSF52343 255 393 3.01E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.722 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 SUPERFAMILY SSF46458 1 142 2.0E-36 T 14-10-2018 IPR009050 Globin-like superfamily VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 SUPERFAMILY SSF63380 149 254 1.99E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Gene3D G3DSA:3.40.50.80 255 394 5.3E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 7.9E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 7.9E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 7.9E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 7.9E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 4.7E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.3E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.3E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.3E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.3E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_14320 fa7574e65db3401a631b659f214a08b6 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 4.3E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 259 276 9.4E-8 T 14-10-2018 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 297 317 9.4E-8 T 14-10-2018 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 277 296 9.4E-8 T 14-10-2018 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 SUPERFAMILY SSF103088 200 314 1.31E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 ProSitePatterns PS01068 OmpA-like domain. 246 290 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 Pfam PF13505 Outer membrane protein beta-barrel domain 7 180 2.0E-24 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 Gene3D G3DSA:2.40.160.20 11 200 2.5E-46 T 14-10-2018 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01021 OMPA domain signature 214 236 2.6E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01021 OMPA domain signature 259 275 2.6E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 PRINTS PR01021 OMPA domain signature 244 259 2.6E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 Gene3D G3DSA:3.30.1330.60 201 321 8.7E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 Pfam PF00691 OmpA family 213 308 1.8E-25 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_17706 84b7ea564aa7c185330cce4eae6854e1 327 SUPERFAMILY SSF56925 24 180 1.57E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 SUPERFAMILY SSF51230 520 594 3.53E-20 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 Pfam PF00682 HMGL-like 6 270 2.7E-60 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 SUPERFAMILY SSF51569 1 300 4.03E-90 T 14-10-2018 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 Pfam PF02436 Conserved carboxylase domain 292 495 1.3E-60 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 Gene3D G3DSA:2.40.50.100 521 595 8.9E-23 T 14-10-2018 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 Gene3D G3DSA:3.20.20.70 1 464 1.1E-175 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 Pfam PF00364 Biotin-requiring enzyme 529 593 3.0E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 SUPERFAMILY SSF89000 297 462 1.88E-53 T 14-10-2018 VEJY3_13130 d32d6ed7c519fd10d1d47f8e638815db 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 5 288 3.1E-42 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 Gene3D G3DSA:3.40.630.10 5 289 3.2E-97 T 14-10-2018 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 SUPERFAMILY SSF53187 4 292 5.24E-69 T 14-10-2018 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 Hamap MF_00704 Probable aspartoacylase. 2 294 32.427 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 PIRSF PIRSF018001 1 294 7.0E-76 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 VEJY3_05255 f622c31226c48452b7dee9948f612fc1 295 Gene3D G3DSA:2.20.25.160 219 266 3.2E-97 T 14-10-2018 VEJY3_04480 ab5772abaf3017ff1b3b12c3b8e07fb0 196 Gene3D G3DSA:3.40.50.10610 39 188 1.4E-43 T 14-10-2018 VEJY3_04480 ab5772abaf3017ff1b3b12c3b8e07fb0 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.0E-55 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 SUPERFAMILY SSF54211 169 253 2.78E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Gene3D G3DSA:3.40.50.1000 1 165 1.8E-47 T 14-10-2018 IPR023214 HAD superfamily VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.142 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 SUPERFAMILY SSF56784 3 158 4.54E-41 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.777 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 136 7.2E-7 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Gene3D G3DSA:3.30.230.40 257 357 2.0E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Gene3D G3DSA:3.30.230.40 166 256 3.3E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 SUPERFAMILY SSF54211 254 344 5.56E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEJY3_05570 29d61a221d5b57fae48234ddd91c2356 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 4.0E-65 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEJY3_13760 5be243310bbc12dd17294c3c6976f19b 481 SUPERFAMILY SSF111283 18 480 5.36E-129 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEJY3_13760 5be243310bbc12dd17294c3c6976f19b 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.5E-64 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEJY3_13760 5be243310bbc12dd17294c3c6976f19b 481 Gene3D G3DSA:3.30.2290.10 7 240 2.9E-14 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEJY3_13760 5be243310bbc12dd17294c3c6976f19b 481 PIRSF PIRSF004919 14 481 1.2E-141 T 14-10-2018 IPR025502 TldD VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 SUPERFAMILY SSF161098 12 257 1.31E-40 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 Gene3D G3DSA:1.10.3720.10 5 263 1.3E-42 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 Gene3D G3DSA:1.10.3720.10 283 529 1.0E-28 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 SUPERFAMILY SSF161098 282 521 1.96E-32 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 256 1.8E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_01560 fcaa2ec3ac450ccec4dfe68800819a49 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 511 4.1E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 620 750 2.2E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Gene3D G3DSA:3.40.50.2300 16 150 4.5E-26 T 14-10-2018 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 151 595 2.6E-151 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 SUPERFAMILY SSF53383 151 612 4.99E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_22711 e99bb478828148d6852664dda671fd05 764 SUPERFAMILY SSF55904 615 764 1.96E-40 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 PIRSF PIRSF009393 12 764 4.1E-254 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Gene3D G3DSA:3.90.1150.10 453 635 1.1E-71 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 391 405 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Gene3D G3DSA:3.90.100.10 636 764 8.8E-42 T 14-10-2018 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 31 145 2.6E-18 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VEJY3_22711 e99bb478828148d6852664dda671fd05 764 Gene3D G3DSA:3.40.640.10 151 452 3.9E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 Gene3D G3DSA:3.40.50.300 1 237 1.8E-81 T 14-10-2018 VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 Pfam PF00005 ABC transporter 20 161 8.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 SUPERFAMILY SSF52540 4 240 4.97E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 SMART SM00382 28 211 2.6E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 SUPERFAMILY SSF50331 248 334 1.59E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_16856 dbce5efc6b21046e0d35339976b32a45 339 Pfam PF08402 TOBE domain 257 330 9.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_05605 d43117cfd28ed6a5c88a2412f8d333ca 242 Gene3D G3DSA:3.60.21.10 1 233 1.8E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_05605 d43117cfd28ed6a5c88a2412f8d333ca 242 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 3.0E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_05605 d43117cfd28ed6a5c88a2412f8d333ca 242 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 124.401 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VEJY3_05605 d43117cfd28ed6a5c88a2412f8d333ca 242 SUPERFAMILY SSF56300 1 223 7.14E-33 T 14-10-2018 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Gene3D G3DSA:3.30.1060.10 21 201 3.0E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 SUPERFAMILY SSF51316 239 378 1.41E-58 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Gene3D G3DSA:2.170.150.20 233 379 7.2E-56 T 14-10-2018 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 4.5E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.063 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 SUPERFAMILY SSF55068 28 205 2.88E-71 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.463 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16451 391bb182d19b3d4e5687b58170c44dc3 379 Pfam PF01641 SelR domain 244 362 8.3E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 Gene3D G3DSA:1.10.1200.80 252 322 1.2E-7 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 306 3.1E-109 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 Gene3D G3DSA:3.20.20.70 6 249 2.3E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.999 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 SUPERFAMILY SSF51395 10 319 3.11E-90 T 14-10-2018 VEJY3_14645 0c7d5ba7ab0b8127140a66989b4bce92 322 PIRSF PIRSF006621 1 321 5.8E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 SMART SM00244 22 180 3.9E-59 T 14-10-2018 IPR001107 Band 7 domain VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 PRINTS PR00721 Stomatin signature 77 98 5.3E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 PRINTS PR00721 Stomatin signature 156 174 5.3E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 PRINTS PR00721 Stomatin signature 112 129 5.3E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 PRINTS PR00721 Stomatin signature 132 155 5.3E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 PRINTS PR00721 Stomatin signature 175 196 5.3E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 2.2E-35 T 14-10-2018 IPR001107 Band 7 domain VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 SUPERFAMILY SSF117892 53 187 2.35E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 Pfam PF16200 C-terminal region of band_7 242 303 3.6E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VEJY3_03660 9a016243c593b3b560f0c2f7ff5bf116 305 Gene3D G3DSA:3.30.479.30 50 182 3.1E-43 T 14-10-2018 VEJY3_01715 c54cf0798daefe7ab56d6b73d1b03fa4 599 Gene3D G3DSA:3.40.50.12780 1 315 9.1E-55 T 14-10-2018 VEJY3_01715 c54cf0798daefe7ab56d6b73d1b03fa4 599 Gene3D G3DSA:3.40.50.12780 316 460 2.3E-33 T 14-10-2018 VEJY3_01715 c54cf0798daefe7ab56d6b73d1b03fa4 599 Pfam PF00501 AMP-binding enzyme 14 466 4.9E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_01715 c54cf0798daefe7ab56d6b73d1b03fa4 599 SUPERFAMILY SSF56801 7 596 4.58E-115 T 14-10-2018 VEJY3_01715 c54cf0798daefe7ab56d6b73d1b03fa4 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 SUPERFAMILY SSF52172 1 144 3.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 Gene3D G3DSA:3.40.50.2300 1 145 5.1E-26 T 14-10-2018 VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 Pfam PF12431 Transcriptional regulator 133 161 4.2E-9 T 14-10-2018 IPR028141 Transcriptional regulator VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 SUPERFAMILY SSF46785 163 219 8.08E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 Pfam PF00072 Response regulator receiver domain 6 117 4.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 PIRSF PIRSF006171 2 225 5.3E-81 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 SMART SM00448 4 117 8.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17121 1a5d9eda076074775cdc8f09a7503cb6 225 Gene3D G3DSA:1.10.10.10 164 214 2.4E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04975 2d26926bff0b500645e157782080c019 153 Gene3D G3DSA:2.60.40.1890 36 149 5.1E-34 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEJY3_04975 2d26926bff0b500645e157782080c019 153 SUPERFAMILY SSF110087 8 145 3.92E-45 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEJY3_04975 2d26926bff0b500645e157782080c019 153 Pfam PF04314 Copper chaperone PCu(A)C 32 140 1.4E-33 T 14-10-2018 IPR007410 Copper chaperone PCuAC VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 Pfam PF13404 AsnC-type helix-turn-helix domain 5 42 3.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 SUPERFAMILY SSF46785 5 63 1.64E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 Gene3D G3DSA:1.10.10.10 1 56 8.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 8.6E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 Gene3D G3DSA:3.30.70.920 57 150 3.0E-19 T 14-10-2018 VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 SMART SM00344 5 114 1.0E-23 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 SUPERFAMILY SSF54909 67 148 3.75E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.1E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.1E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_23031 d05d2cdd47fb49be433e9bb59bdc1781 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.1E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 SUPERFAMILY SSF48498 89 177 3.84E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 5.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 Gene3D G3DSA:1.10.357.10 1 184 4.3E-47 T 14-10-2018 VEJY3_08405 30ae9281b9bec7d01f4024498a1d3a39 184 SUPERFAMILY SSF46689 3 73 1.95E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 Gene3D G3DSA:3.40.190.10 3 145 9.7E-23 T 14-10-2018 VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 74 4.5E-6 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 Gene3D G3DSA:3.40.190.10 177 274 7.3E-10 T 14-10-2018 VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 96 271 7.1E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 SMART SM00062 18 274 1.4E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_23521 54cc41d71bf39784df9a21049ce92719 289 SUPERFAMILY SSF53850 3 272 6.41E-36 T 14-10-2018 VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 9.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 9.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 9.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 9.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 9.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 SUPERFAMILY SSF51735 10 242 2.05E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 Gene3D G3DSA:3.40.50.720 2 246 8.7E-72 T 14-10-2018 VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 Pfam PF00106 short chain dehydrogenase 13 208 2.9E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10575 bbbd5b6981776e525d222fc2917fa94a 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0038 T 14-10-2018 VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 Pfam PF00294 pfkB family carbohydrate kinase 16 309 3.5E-59 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 Gene3D G3DSA:3.40.1190.20 14 321 3.7E-83 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 SUPERFAMILY SSF53613 15 316 2.65E-82 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 PRINTS PR00990 Ribokinase signature 193 208 5.5E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 PRINTS PR00990 Ribokinase signature 39 58 5.5E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_09380 e1ae954f9c033d4af9e37f02a8f3b0a7 321 PRINTS PR00990 Ribokinase signature 232 243 5.5E-6 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18686 797755e28e42520b736dc5769b147502 269 Gene3D G3DSA:3.40.1010.10 7 124 2.4E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEJY3_18686 797755e28e42520b736dc5769b147502 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 219 1.1E-43 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEJY3_18686 797755e28e42520b736dc5769b147502 269 SUPERFAMILY SSF53790 6 252 6.41E-75 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEJY3_18686 797755e28e42520b736dc5769b147502 269 Gene3D G3DSA:3.30.950.10 125 268 1.3E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEJY3_18686 797755e28e42520b736dc5769b147502 269 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 14-10-2018 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 14-10-2018 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 3.9E-81 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 Gene3D G3DSA:3.40.50.720 377 664 1.0E-107 T 14-10-2018 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 630 1.5E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 SUPERFAMILY SSF51971 376 625 4.24E-41 T 14-10-2018 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 SUPERFAMILY SSF51395 5 364 9.3E-108 T 14-10-2018 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 Gene3D G3DSA:3.20.20.70 4 370 4.3E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_11125 a9b7a7c56a005391fdeb2637a259bada 670 Gene3D G3DSA:3.50.50.60 471 623 1.0E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 Gene3D G3DSA:3.40.605.10 11 269 1.3E-91 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.3E-168 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 SUPERFAMILY SSF53720 13 497 2.62E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_07895 5aef0d88ba0b55da99bd147cfdfda5de 506 Gene3D G3DSA:3.40.309.10 270 500 4.2E-74 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_08370 5f1709e30efafabac7d8035aa13b614b 179 SUPERFAMILY SSF55729 2 160 7.34E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_08370 5f1709e30efafabac7d8035aa13b614b 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 4.1E-35 T 14-10-2018 IPR000182 GNAT domain VEJY3_08370 5f1709e30efafabac7d8035aa13b614b 179 Gene3D G3DSA:3.40.630.30 2 159 3.3E-45 T 14-10-2018 VEJY3_16676 08bc8017928b561361ee26496522a424 116 SUPERFAMILY SSF52821 27 111 1.18E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_16676 08bc8017928b561361ee26496522a424 116 Pfam PF00581 Rhodanese-like domain 29 114 5.8E-17 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_16676 08bc8017928b561361ee26496522a424 116 Gene3D G3DSA:3.40.250.10 24 116 2.0E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_16676 08bc8017928b561361ee26496522a424 116 SMART SM00450 25 116 8.1E-21 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.9E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Gene3D G3DSA:2.40.50.140 1 106 8.8E-35 T 14-10-2018 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Gene3D G3DSA:3.30.1360.30 271 420 1.2E-195 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Pfam PF02938 GAD domain 307 406 7.9E-30 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Gene3D G3DSA:3.30.930.10 118 578 1.2E-195 T 14-10-2018 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 SUPERFAMILY SSF55681 108 582 1.01E-101 T 14-10-2018 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.326 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.6E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEJY3_04875 b50b774f2cff0a6b75393f5a09bc0726 592 SUPERFAMILY SSF55261 288 419 2.94E-46 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 Gene3D G3DSA:3.40.140.10 180 295 2.8E-27 T 14-10-2018 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 5.7E-42 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.932 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 Gene3D G3DSA:3.40.140.10 29 179 1.5E-44 T 14-10-2018 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 PIRSF PIRSF006334 14 295 1.1E-110 T 14-10-2018 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 SUPERFAMILY SSF53927 1 146 2.34E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 SUPERFAMILY SSF53927 152 284 1.91E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 7.1E-100 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEJY3_06260 81c2fdf8d1a00b9c95253ba5e0e97e05 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 4.4E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEJY3_18091 af4ae094849d14b3aab4ecb14805a5e6 367 Gene3D G3DSA:3.20.20.140 32 367 3.0E-85 T 14-10-2018 VEJY3_18091 af4ae094849d14b3aab4ecb14805a5e6 367 SUPERFAMILY SSF51556 32 364 2.58E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_18091 af4ae094849d14b3aab4ecb14805a5e6 367 Pfam PF04909 Amidohydrolase 34 362 3.1E-51 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_19031 6e7abebef5a3dadabb9e5bdb0c7f0ea5 505 Gene3D G3DSA:3.40.720.10 31 432 2.8E-98 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_19031 6e7abebef5a3dadabb9e5bdb0c7f0ea5 505 SUPERFAMILY SSF53649 30 500 2.62E-125 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_19031 6e7abebef5a3dadabb9e5bdb0c7f0ea5 505 Pfam PF00884 Sulfatase 34 359 3.0E-64 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 SUPERFAMILY SSF111369 61 238 2.35E-21 T 14-10-2018 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Pfam PF13437 HlyD family secretion protein 184 293 2.4E-9 T 14-10-2018 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Gene3D G3DSA:2.40.420.20 307 371 6.2E-49 T 14-10-2018 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Pfam PF13533 Biotin-lipoyl like 72 120 1.3E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Gene3D G3DSA:2.40.50.100 69 214 6.2E-49 T 14-10-2018 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Gene3D G3DSA:1.10.287.470 106 180 6.2E-49 T 14-10-2018 VEJY3_16836 2bc8c594d450c9b83a0d319d5d980a5b 385 Gene3D G3DSA:2.40.30.170 60 306 6.2E-49 T 14-10-2018 VEJY3_15235 721d705131857155e8e45a1128d8ad5c 87 SUPERFAMILY SSF54285 24 87 1.55E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEJY3_15235 721d705131857155e8e45a1128d8ad5c 87 Pfam PF02597 ThiS family 25 87 3.2E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VEJY3_15235 721d705131857155e8e45a1128d8ad5c 87 Gene3D G3DSA:3.10.20.30 22 87 4.3E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 SUPERFAMILY SSF52833 3 106 2.43E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 Gene3D G3DSA:3.40.30.10 1 108 2.7E-35 T 14-10-2018 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 PIRSF PIRSF000077 2 108 1.7E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 VEJY3_15125 0cf54b456308e94c650599854f3396ea 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEJY3_13665 d74a34c73b2b157722b469487747577c 267 Gene3D G3DSA:3.40.50.300 4 255 2.7E-66 T 14-10-2018 VEJY3_13665 d74a34c73b2b157722b469487747577c 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_13665 d74a34c73b2b157722b469487747577c 267 SUPERFAMILY SSF52540 6 239 2.21E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13665 d74a34c73b2b157722b469487747577c 267 Pfam PF00005 ABC transporter 23 170 2.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_13665 d74a34c73b2b157722b469487747577c 267 SMART SM00382 31 237 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_03445 edefc46ef8bee97a97aa213b62bd613a 157 Gene3D G3DSA:3.90.960.10 1 157 2.8E-58 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_03445 edefc46ef8bee97a97aa213b62bd613a 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 3.6E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_03445 edefc46ef8bee97a97aa213b62bd613a 157 SUPERFAMILY SSF55826 2 156 1.27E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_03445 edefc46ef8bee97a97aa213b62bd613a 157 PIRSF PIRSF006181 1 157 3.0E-53 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VEJY3_24071 6470d952e119f072a8f797d22da47e2e 391 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 83 1.9E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEJY3_24071 6470d952e119f072a8f797d22da47e2e 391 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 197 384 6.4E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_24071 6470d952e119f072a8f797d22da47e2e 391 Gene3D G3DSA:1.10.3720.10 167 382 1.7E-22 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_24071 6470d952e119f072a8f797d22da47e2e 391 SUPERFAMILY SSF161098 174 370 7.19E-24 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 SMART SM00382 365 549 5.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 SUPERFAMILY SSF52540 335 571 1.55E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 Pfam PF00005 ABC transporter 356 502 1.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 SUPERFAMILY SSF90123 7 323 7.72E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 Gene3D G3DSA:3.40.50.300 327 573 1.6E-75 T 14-10-2018 VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 Pfam PF00664 ABC transporter transmembrane region 59 272 7.5E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06030 2090b2cb5ef9413b90f1acb475717953 573 Gene3D G3DSA:1.20.1560.10 1 320 2.5E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 Gene3D G3DSA:2.102.10.10 54 175 5.8E-151 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 Gene3D G3DSA:3.90.380.10 28 412 5.8E-151 T 14-10-2018 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 194 416 3.7E-45 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 SUPERFAMILY SSF55961 174 416 2.04E-49 T 14-10-2018 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 41 66 3.8E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 3.8E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 71 86 3.8E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 113 133 3.8E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 92 112 3.8E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 SUPERFAMILY SSF50022 32 168 7.59E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_21551 f81d04da195e1afb6e567a8fd709b827 419 Pfam PF00355 Rieske [2Fe-2S] domain 57 132 4.1E-18 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.599 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 8.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 3.7E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.692 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 1.8E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Gene3D G3DSA:3.10.20.400 4 102 7.2E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 4.3E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 Gene3D G3DSA:1.10.287.1080 120 211 4.9E-30 T 14-10-2018 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 SUPERFAMILY SSF141734 14 124 1.44E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VEJY3_05590 c141ebe23595ce142902f45d0d6e291c 211 SUPERFAMILY SSF101386 123 210 1.01E-25 T 14-10-2018 VEJY3_19836 37213e8ed132e49b2e9808622f3b4a54 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.7E-19 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VEJY3_19836 37213e8ed132e49b2e9808622f3b4a54 103 PIRSF PIRSF037511 1 103 2.5E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VEJY3_19836 37213e8ed132e49b2e9808622f3b4a54 103 Gene3D G3DSA:3.30.780.10 23 103 2.1E-33 T 14-10-2018 VEJY3_19836 37213e8ed132e49b2e9808622f3b4a54 103 SUPERFAMILY SSF55159 3 99 4.58E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 SUPERFAMILY SSF53738 209 317 2.47E-8 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 7.9E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Gene3D G3DSA:3.40.120.10 12 218 4.8E-75 T 14-10-2018 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Gene3D G3DSA:3.40.120.10 221 318 5.7E-45 T 14-10-2018 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 2.4E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Gene3D G3DSA:3.40.120.10 319 442 2.2E-35 T 14-10-2018 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 7.3E-29 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 7.7E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 SUPERFAMILY SSF53738 26 235 1.67E-52 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 SUPERFAMILY SSF53738 305 446 2.19E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 SUPERFAMILY SSF55957 433 543 2.44E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_03815 6867c352a3a424bab203120f620fd483 548 Gene3D G3DSA:3.30.310.50 443 546 2.2E-35 T 14-10-2018 VEJY3_11075 04bf76adf4802741cd7f825995e1bacd 254 Gene3D G3DSA:3.40.50.300 1 253 1.1E-68 T 14-10-2018 VEJY3_11075 04bf76adf4802741cd7f825995e1bacd 254 SUPERFAMILY SSF52540 2 227 6.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11075 04bf76adf4802741cd7f825995e1bacd 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_11075 04bf76adf4802741cd7f825995e1bacd 254 Pfam PF00005 ABC transporter 19 165 3.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_11075 04bf76adf4802741cd7f825995e1bacd 254 SMART SM00382 26 213 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_22826 82136364f4282b5973950ed266706a48 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 1.0E-44 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VEJY3_22826 82136364f4282b5973950ed266706a48 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 171 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 Gene3D G3DSA:3.40.50.720 1 167 3.6E-50 T 14-10-2018 VEJY3_22826 82136364f4282b5973950ed266706a48 442 SUPERFAMILY SSF51735 4 163 3.28E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22826 82136364f4282b5973950ed266706a48 442 Gene3D G3DSA:3.90.110.10 170 442 1.2E-83 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_22826 82136364f4282b5973950ed266706a48 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 185 1.3E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 SUPERFAMILY SSF56327 170 441 6.78E-70 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_22826 82136364f4282b5973950ed266706a48 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.4E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 173.706 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 Pfam PF00871 Acetokinase family 6 390 6.4E-145 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 321 337 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 378 390 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 299 312 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 6 17 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 203 224 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PRINTS PR00471 Acetate kinase family signature 173 186 5.9E-48 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 SUPERFAMILY SSF53067 158 398 5.68E-82 T 14-10-2018 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 Gene3D G3DSA:3.30.420.40 196 399 5.6E-76 T 14-10-2018 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 PIRSF PIRSF000722 2 399 4.2E-138 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 SUPERFAMILY SSF53067 5 196 5.7E-64 T 14-10-2018 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 Gene3D G3DSA:3.30.420.40 3 195 9.7E-68 T 14-10-2018 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_21126 3efbe79fdc3daa838328cb7a88dab889 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Gene3D G3DSA:1.10.274.10 139 259 1.5E-42 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 561 576 1.6E-20 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 614 626 1.6E-20 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 578 593 1.6E-20 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 407 426 1.6E-20 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 SUPERFAMILY SSF55804 691 832 1.44E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Pfam PF00381 PTS HPr component phosphorylation site 6 83 2.6E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 SUPERFAMILY SSF55594 1 88 1.05E-16 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 692 831 7.6E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 SUPERFAMILY SSF52009 238 357 2.09E-24 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Gene3D G3DSA:3.30.1340.10 4 87 7.4E-16 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Gene3D G3DSA:3.50.30.10 122 344 1.5E-42 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 SUPERFAMILY SSF47831 154 256 1.96E-15 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.3E-5 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-5 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.3E-5 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Pfam PF00391 PEP-utilising enzyme, mobile domain 266 339 3.5E-16 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 561 579 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Gene3D G3DSA:3.20.20.60 348 688 7.9E-111 T 14-10-2018 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Pfam PF05524 PEP-utilising enzyme, N-terminal 121 239 9.2E-14 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Gene3D G3DSA:3.40.930.10 689 832 5.2E-33 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 298 309 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 366 654 9.8E-110 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEJY3_08955 547f8ceb59350586a7cd36c47e1f599a 836 SUPERFAMILY SSF51621 368 663 3.14E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 Pfam PF00448 SRP54-type protein, GTPase domain 222 421 1.0E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 SMART SM00382 220 412 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 Gene3D G3DSA:1.20.120.140 123 420 4.6E-117 T 14-10-2018 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 SUPERFAMILY SSF47364 121 200 2.75E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 SMART SM00962 221 422 4.9E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 395 408 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 149 422 65.162 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 SUPERFAMILY SSF52540 218 422 5.76E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 Gene3D G3DSA:3.40.50.300 217 410 4.6E-117 T 14-10-2018 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 SMART SM00963 126 206 6.7E-27 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_14935 0941a39bf0d728aad58a2a77814506af 425 Pfam PF02881 SRP54-type protein, helical bundle domain 141 202 6.5E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 PIRSF PIRSF001467 1 163 2.2E-26 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.9E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.9E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.9E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 Gene3D G3DSA:2.40.100.10 1 163 6.1E-63 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 SUPERFAMILY SSF50891 2 162 4.97E-57 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_15846 e4478ea539068b882fd1eb17ada77eef 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 1.8E-46 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_11095 6b0efd2929e173d84a74b62708f2aff3 297 SUPERFAMILY SSF161098 95 279 3.79E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_11095 6b0efd2929e173d84a74b62708f2aff3 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 293 1.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_11095 6b0efd2929e173d84a74b62708f2aff3 297 Gene3D G3DSA:1.10.3720.10 91 296 2.6E-56 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 Pfam PF01381 Helix-turn-helix 18 79 1.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 SUPERFAMILY SSF47413 12 84 6.19E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 Gene3D G3DSA:1.10.260.40 11 93 7.9E-14 T 14-10-2018 VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 SMART SM00530 17 79 9.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 6.0E-106 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 VEJY3_16421 8ddaa28827a15d0523c3071c4bcb0b2b 518 Pfam PF06114 IrrE N-terminal-like domain 188 326 4.6E-6 T 14-10-2018 IPR010359 IrrE N-terminal-like domain VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 SUPERFAMILY SSF48179 177 472 3.23E-126 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 PIRSF PIRSF000109 1 477 7.7E-241 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 SMART SM01350 179 469 2.2E-213 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 SUPERFAMILY SSF51735 4 174 7.04E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 Gene3D G3DSA:1.10.1040.10 181 434 1.9E-102 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 6.5E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 Gene3D G3DSA:1.20.5.320 435 482 8.7E-25 T 14-10-2018 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 4.5E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_07915 821c33a8d7286aa7ac01a35b8a310a5f 482 Gene3D G3DSA:3.40.50.720 1 180 1.2E-56 T 14-10-2018 VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 SUPERFAMILY SSF54862 107 350 6.95E-33 T 14-10-2018 VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 Gene3D G3DSA:3.30.70.20 220 293 3.2E-5 T 14-10-2018 VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 Gene3D G3DSA:2.60.40.10 357 473 2.8E-47 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.3E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 470 1.6E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 Pfam PF12801 4Fe-4S binding domain 97 136 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_15370 0bd7d24e9d3b46e109eec12959f385a6 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_05580 4911784f1a9837bcb882628fa4863786 245 Gene3D G3DSA:3.20.20.70 1 245 1.9E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_05580 4911784f1a9837bcb882628fa4863786 245 Pfam PF00977 Histidine biosynthesis protein 2 234 7.7E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VEJY3_05580 4911784f1a9837bcb882628fa4863786 245 SUPERFAMILY SSF51366 2 242 2.62E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_05580 4911784f1a9837bcb882628fa4863786 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.474 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 SUPERFAMILY SSF52540 222 635 4.24E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 SUPERFAMILY SSF52540 71 380 2.16E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 Gene3D G3DSA:1.10.8.630 4 113 5.7E-35 T 14-10-2018 VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 Pfam PF00271 Helicase conserved C-terminal domain 500 589 2.5E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 SMART SM00490 493 590 3.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 Gene3D G3DSA:3.40.50.300 186 380 1.1E-75 T 14-10-2018 VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.251 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 Pfam PF00270 DEAD/DEAH box helicase 220 365 1.5E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_01265 240a64dbcf15ff9731cd4f18d9dbe57d 734 SMART SM00487 197 396 5.9E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_21921 f3e665cb8bf79019568a8e8db29613e6 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 8.4E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_21921 f3e665cb8bf79019568a8e8db29613e6 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 3.3E-11 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEJY3_21921 f3e665cb8bf79019568a8e8db29613e6 157 SUPERFAMILY SSF54534 19 156 1.62E-50 T 14-10-2018 VEJY3_21921 f3e665cb8bf79019568a8e8db29613e6 157 Gene3D G3DSA:3.10.50.40 21 157 8.5E-52 T 14-10-2018 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 6.5E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Gene3D G3DSA:3.40.50.300 158 347 3.3E-74 T 14-10-2018 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Gene3D G3DSA:3.40.50.300 550 764 7.3E-89 T 14-10-2018 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Gene3D G3DSA:1.10.8.60 766 857 1.2E-26 T 14-10-2018 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.5E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.3E-11 T 14-10-2018 IPR004176 Clp, N-terminal VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.8E-14 T 14-10-2018 IPR004176 Clp, N-terminal VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Gene3D G3DSA:1.10.1780.10 1 148 2.5E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SUPERFAMILY SSF52540 159 545 1.31E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SUPERFAMILY SSF52540 546 850 5.68E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 319 7.0E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SMART SM01086 766 855 9.5E-38 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SMART SM00382 597 748 3.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SMART SM00382 198 344 3.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 Gene3D G3DSA:3.40.50.300 348 544 6.5E-67 T 14-10-2018 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEJY3_02535 eabbba32800efc030a763904a90ca4a3 857 SUPERFAMILY SSF81923 4 156 1.18E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 SUPERFAMILY SSF53383 16 399 1.09E-130 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 Gene3D G3DSA:3.90.1150.10 25 392 9.6E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 PIRSF PIRSF000521 27 157 2.3E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 PIRSF PIRSF000521 172 402 8.4E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 Gene3D G3DSA:3.40.640.10 59 304 9.6E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.363 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VEJY3_14285 e996df70504474cbcfc725a71efd86c9 403 Pfam PF00202 Aminotransferase class-III 22 399 8.1E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_11415 003583527aaa319884b84051002ddab3 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 1.6E-54 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VEJY3_11415 003583527aaa319884b84051002ddab3 161 Gene3D G3DSA:1.10.8.640 20 105 4.2E-37 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 434 1.1E-56 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Gene3D G3DSA:4.10.320.10 149 196 3.4E-7 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Pfam PF00364 Biotin-requiring enzyme 12 84 1.8E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Gene3D G3DSA:3.30.559.10 197 434 5.5E-63 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Pfam PF02817 e3 binding domain 162 193 4.2E-6 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 SUPERFAMILY SSF52777 213 434 3.56E-55 T 14-10-2018 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 SUPERFAMILY SSF47005 154 195 1.31E-6 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 Gene3D G3DSA:2.40.50.100 7 111 1.7E-20 T 14-10-2018 VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 SUPERFAMILY SSF51230 10 93 2.49E-20 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_20386 2e2e6336dde556f1bd91aa167bbc2f66 435 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 35 64 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 Gene3D G3DSA:3.40.50.12740 4 205 1.9E-65 T 14-10-2018 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 SUPERFAMILY SSF52172 4 134 8.54E-34 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 SMART SM00421 145 202 7.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 SMART SM00448 4 117 1.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 Pfam PF00072 Response regulator receiver domain 6 117 1.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17656 a4aa0d336ff7e183ab0269aafc084e3f 210 SUPERFAMILY SSF46894 131 204 7.82E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 1.3E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 SUPERFAMILY SSF53706 48 627 6.54E-148 T 14-10-2018 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 Gene3D G3DSA:3.40.50.740 122 497 1.7E-68 T 14-10-2018 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 PIRSF PIRSF000144 1 767 0.0 T 14-10-2018 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 Pfam PF00384 Molybdopterin oxidoreductase 110 493 1.8E-24 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 SUPERFAMILY SSF50692 646 764 9.95E-17 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_19651 4263d8f874b0856c1abea6cc48ccda8d 774 Gene3D G3DSA:3.40.228.10 182 404 1.7E-68 T 14-10-2018 VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 Pfam PF00106 short chain dehydrogenase 3 192 6.1E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 Gene3D G3DSA:3.40.50.720 2 235 1.7E-43 T 14-10-2018 VEJY3_16441 2491a6fe27eaeab5dbcc41e3690af434 235 SUPERFAMILY SSF51735 3 235 5.44E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 SUPERFAMILY SSF81464 15 117 1.96E-28 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 SUPERFAMILY SSF46626 266 371 5.38E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 8.1E-37 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 SUPERFAMILY SSF49503 115 315 1.83E-53 T 14-10-2018 IPR008972 Cupredoxin VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Gene3D G3DSA:1.10.287.90 25 119 3.5E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Gene3D G3DSA:2.60.40.420 120 258 1.9E-54 T 14-10-2018 IPR008972 Cupredoxin VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Gene3D G3DSA:1.10.760.10 264 387 1.6E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 108 3.7E-16 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 5.6E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 2.5E-40 T 14-10-2018 VEJY3_21966 9fc32b100e9cf9c91d712f1a2c787f17 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 2.5E-40 T 14-10-2018 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.122 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 SUPERFAMILY SSF50447 165 288 1.19E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Gene3D G3DSA:3.30.70.2570 479 553 5.4E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Gene3D G3DSA:3.30.70.3380 368 478 7.0E-40 T 14-10-2018 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 SMART SM00838 398 486 0.0044 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Gene3D G3DSA:2.40.30.10 186 285 1.5E-34 T 14-10-2018 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 14-10-2018 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Pfam PF00679 Elongation factor G C-terminus 399 482 5.9E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 SUPERFAMILY SSF52540 2 205 2.74E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.1E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Gene3D G3DSA:3.40.50.300 1 185 7.9E-71 T 14-10-2018 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.2E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 SUPERFAMILY SSF54980 399 493 2.45E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_13275 84c4693a8b4fbe4b766353e135cc1b1c 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 SUPERFAMILY SSF55785 20 114 5.06E-25 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 Gene3D G3DSA:1.10.287.950 193 518 2.6E-52 T 14-10-2018 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 SMART SM00283 257 518 8.7E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 484 5.2E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 Gene3D G3DSA:3.30.450.20 4 117 4.4E-23 T 14-10-2018 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 SUPERFAMILY SSF58104 263 518 4.45E-56 T 14-10-2018 VEJY3_17716 fcd7b34acfde22cfd6c12412bcfd7269 522 Pfam PF08447 PAS fold 31 114 2.0E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VEJY3_19041 3ad4566d6786c8d913e7902d63f9aa33 327 SUPERFAMILY SSF52540 4 302 1.34E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19041 3ad4566d6786c8d913e7902d63f9aa33 327 Gene3D G3DSA:1.10.8.300 209 324 5.3E-35 T 14-10-2018 VEJY3_19041 3ad4566d6786c8d913e7902d63f9aa33 327 Gene3D G3DSA:3.40.50.300 1 208 2.1E-51 T 14-10-2018 VEJY3_19041 3ad4566d6786c8d913e7902d63f9aa33 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 9.0E-61 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VEJY3_19041 3ad4566d6786c8d913e7902d63f9aa33 327 PIRSF PIRSF002849 1 327 6.5E-127 T 14-10-2018 VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 Gene3D G3DSA:1.10.60.30 104 175 1.0E-24 T 14-10-2018 VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 PIRSF PIRSF016183 1 175 3.0E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.994 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 Gene3D G3DSA:1.10.60.30 28 102 2.1E-26 T 14-10-2018 VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.8E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VEJY3_13730 3bedc30064c474bbb71eb014c4256084 175 SUPERFAMILY SSF158710 28 170 2.88E-52 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 2.3E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Gene3D G3DSA:3.40.50.300 211 388 1.7E-44 T 14-10-2018 VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.4E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 SUPERFAMILY SSF52540 73 357 1.27E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Pfam PF03880 DbpA RNA binding domain 386 456 3.6E-21 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Gene3D G3DSA:3.30.70.330 389 458 1.7E-17 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 Gene3D G3DSA:3.40.50.300 2 210 8.3E-75 T 14-10-2018 VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 SMART SM00490 257 338 7.1E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_01435 58e0fa2738f84de12068575629bb0353 459 SMART SM00487 23 225 1.6E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 156 2.2E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.617 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 SUPERFAMILY SSF56553 53 179 3.66E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Gene3D G3DSA:3.30.1360.10 17 229 2.7E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 SMART SM00662 23 235 2.0E-102 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_01405 3c99af312b4c543139045fd6bd69a494 330 Gene3D G3DSA:2.170.120.12 53 178 2.7E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_21906 4fdbabdbf42747df83c444e84824428a 119 Gene3D G3DSA:3.40.30.10 27 119 3.4E-13 T 14-10-2018 VEJY3_21906 4fdbabdbf42747df83c444e84824428a 119 SUPERFAMILY SSF52833 41 118 1.36E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_21906 4fdbabdbf42747df83c444e84824428a 119 Pfam PF00462 Glutaredoxin 43 96 2.1E-11 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 SUPERFAMILY SSF50615 10 94 1.0E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 2.0E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 SUPERFAMILY SSF47917 383 511 1.2E-45 T 14-10-2018 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.0E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Gene3D G3DSA:3.40.50.300 94 382 3.6E-130 T 14-10-2018 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.598 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 SUPERFAMILY SSF52540 96 381 1.56E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Gene3D G3DSA:1.20.150.20 383 513 5.5E-48 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Gene3D G3DSA:2.40.30.20 1 93 2.6E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.5E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15460 cb723606c84ad4f38c0d48315e20e159 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 14-10-2018 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 14-10-2018 VEJY3_01610 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 Pfam PF02436 Conserved carboxylase domain 295 497 6.4E-56 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 Gene3D G3DSA:3.20.20.70 1 465 1.7E-172 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 SUPERFAMILY SSF51230 521 594 9.82E-22 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 Pfam PF00682 HMGL-like 8 273 1.7E-64 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 SUPERFAMILY SSF51569 5 302 2.56E-90 T 14-10-2018 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 Gene3D G3DSA:2.40.50.100 529 595 1.3E-25 T 14-10-2018 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 Pfam PF00364 Biotin-requiring enzyme 534 594 8.5E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 SUPERFAMILY SSF89000 300 462 9.42E-48 T 14-10-2018 VEJY3_17136 bfe72f7162d877dbee52f7f291b26736 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 Gene3D G3DSA:3.30.300.20 1 106 2.1E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.52 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 1.0E-46 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.7E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VEJY3_12685 c42ae8a662225d2bdc5a08caa92e2e83 131 SUPERFAMILY SSF89919 2 105 4.58E-32 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.8E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.578 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 SUPERFAMILY SSF55681 8 293 5.88E-132 T 14-10-2018 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 2.5E-148 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 Gene3D G3DSA:1.20.58.180 216 298 1.8E-33 T 14-10-2018 VEJY3_00100 2fbfc3e931339c8a1384734b2b8ce61f 306 Gene3D G3DSA:3.30.930.10 1 215 2.9E-110 T 14-10-2018 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 SUPERFAMILY SSF51246 317 389 6.28E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 Pfam PF02222 ATP-grasp domain 121 293 9.8E-59 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 Gene3D G3DSA:3.30.470.20 195 389 2.6E-60 T 14-10-2018 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 Gene3D G3DSA:3.40.50.20 1 120 2.0E-53 T 14-10-2018 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 Gene3D G3DSA:3.30.1490.20 121 194 2.7E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.911 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 SUPERFAMILY SSF56059 111 313 4.07E-57 T 14-10-2018 VEJY3_06255 853d2b092f97ad5c4629a664c4015af5 391 SUPERFAMILY SSF52440 2 110 2.88E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_08195 a5a3bd1c31202710a73b06230f2d9767 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 8.7E-17 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 Gene3D G3DSA:3.40.50.1390 6 186 1.8E-23 T 14-10-2018 VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 Pfam PF13408 Recombinase zinc beta ribbon domain 318 372 2.7E-7 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 SMART SM00857 8 179 6.9E-14 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 Pfam PF00239 Resolvase, N terminal domain 10 173 3.6E-11 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 Pfam PF07508 Recombinase 205 304 4.1E-10 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 VEJY3_21121 6ebacfa61280ba65591a983a2876940c 598 SUPERFAMILY SSF53041 8 174 4.58E-12 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 SUPERFAMILY SSF159894 3 103 4.97E-27 T 14-10-2018 VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 PIRSF PIRSF028788 7 195 2.9E-35 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 Pfam PF04994 TfoX C-terminal domain 114 192 7.9E-28 T 14-10-2018 IPR007077 TfoX, C-terminal VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 Gene3D G3DSA:1.10.150.20 113 195 6.8E-17 T 14-10-2018 VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 Pfam PF04993 TfoX N-terminal domain 11 100 3.6E-24 T 14-10-2018 IPR007076 TfoX, N-terminal VEJY3_05995 239bdd36c08e49bbc2b1716035d79146 195 Gene3D G3DSA:3.30.1460.30 4 102 6.0E-18 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Gene3D G3DSA:3.10.350.10 520 571 5.9E-15 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Gene3D G3DSA:2.60.40.3500 23 137 1.0E-24 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Gene3D G3DSA:3.40.630.40 154 398 1.3E-67 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Pfam PF11741 AMIN domain 34 135 4.0E-17 T 14-10-2018 IPR021731 AMIN domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SMART SM00257 526 569 5.7E-12 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SMART SM00257 473 516 8.5E-15 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SMART SM00257 410 453 1.8E-13 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SUPERFAMILY SSF53187 167 392 1.26E-51 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Pfam PF01476 LysM domain 411 453 1.4E-12 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Pfam PF01476 LysM domain 474 515 7.7E-12 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Pfam PF01476 LysM domain 527 569 5.5E-13 T 14-10-2018 IPR018392 LysM domain VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SUPERFAMILY SSF54106 526 569 9.55E-10 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 9.0E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Gene3D G3DSA:3.10.350.10 469 519 3.5E-15 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 Gene3D G3DSA:3.10.350.10 406 458 3.3E-13 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SUPERFAMILY SSF54106 471 516 4.84E-10 T 14-10-2018 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SMART SM00646 230 389 3.3E-61 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VEJY3_14370 725f27f63246ce59d2263c3797f83fcf 571 SUPERFAMILY SSF54106 409 453 1.57E-9 T 14-10-2018 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.1110 35 171 6.4E-27 T 14-10-2018 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 1.4E-13 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:3.20.20.80 410 1009 2.4E-215 T 14-10-2018 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF51011 978 1091 3.96E-38 T 14-10-2018 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SMART SM00642 552 936 5.9E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF49452 16 171 3.6E-26 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF51445 407 975 3.51E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.10 303 409 3.6E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF81296 171 296 2.52E-30 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.10 1226 1326 4.9E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF81296 309 412 1.04E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_23761 497d82b93dea22955c324409f751177c 1326 SUPERFAMILY SSF81296 1103 1153 3.08E-5 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.1180 1010 1091 4.3E-25 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 3.0E-62 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.1130 181 296 2.6E-31 T 14-10-2018 VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Gene3D G3DSA:2.60.40.10 1092 1165 3.3E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_23761 497d82b93dea22955c324409f751177c 1326 Pfam PF03714 Bacterial pullanase-associated domain 51 171 6.0E-15 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 SMART SM00977 365 434 2.6E-24 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 SUPERFAMILY SSF56037 323 436 4.18E-29 T 14-10-2018 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 3.1E-16 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Gene3D G3DSA:1.20.59.20 234 318 2.3E-27 T 14-10-2018 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Pfam PF01171 PP-loop family 21 199 1.4E-54 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 SUPERFAMILY SSF52402 17 233 1.43E-60 T 14-10-2018 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 SUPERFAMILY SSF82829 234 318 1.96E-24 T 14-10-2018 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 309 22.672 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Pfam PF11734 TilS substrate C-terminal domain 365 435 9.0E-25 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Pfam PF09179 TilS substrate binding domain 248 315 3.9E-18 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 Gene3D G3DSA:3.40.50.620 13 233 5.8E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_11990 e8beebcd88b212ed1a6954935d84232c 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 5.0E-52 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEJY3_23246 670831319d9bca060174ce51147a0978 309 Gene3D G3DSA:3.40.50.1980 133 304 1.5E-46 T 14-10-2018 VEJY3_23246 670831319d9bca060174ce51147a0978 309 Pfam PF01497 Periplasmic binding protein 47 276 1.7E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_23246 670831319d9bca060174ce51147a0978 309 SUPERFAMILY SSF53807 42 302 3.49E-55 T 14-10-2018 VEJY3_23246 670831319d9bca060174ce51147a0978 309 Gene3D G3DSA:3.40.50.1980 33 131 9.3E-29 T 14-10-2018 VEJY3_23246 670831319d9bca060174ce51147a0978 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 95 110 5.7E-5 T 14-10-2018 VEJY3_23246 670831319d9bca060174ce51147a0978 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 64 82 5.7E-5 T 14-10-2018 VEJY3_23246 670831319d9bca060174ce51147a0978 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 5.7E-5 T 14-10-2018 VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 Pfam PF02743 Cache domain 38 264 1.1E-27 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 516 6.0E-48 T 14-10-2018 IPR000160 GGDEF domain VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 SUPERFAMILY SSF55073 368 515 1.57E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 Gene3D G3DSA:3.30.70.270 357 517 6.2E-52 T 14-10-2018 VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 513 1.1E-43 T 14-10-2018 IPR000160 GGDEF domain VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 SUPERFAMILY SSF103190 183 263 4.32E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 SMART SM00267 352 517 3.9E-57 T 14-10-2018 IPR000160 GGDEF domain VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 Gene3D G3DSA:3.30.450.20 154 280 7.0E-15 T 14-10-2018 VEJY3_10430 eca12d39d361bc89ea1c9d35901872a4 518 SUPERFAMILY SSF103190 80 180 4.08E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_17086 0792f9650198c8155068c9568713df5e 470 SUPERFAMILY SSF56176 175 349 4.67E-42 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 185 349 1.1E-39 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Gene3D G3DSA:1.10.150.120 88 171 1.6E-28 T 14-10-2018 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 SMART SM01092 357 459 1.9E-21 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal VEJY3_17086 0792f9650198c8155068c9568713df5e 470 SUPERFAMILY SSF55447 354 460 4.71E-25 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 72 1.2E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Gene3D G3DSA:3.30.390.50 352 463 1.9E-23 T 14-10-2018 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 SUPERFAMILY SSF54292 3 86 2.1E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Gene3D G3DSA:3.10.20.30 1 87 4.4E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_17086 0792f9650198c8155068c9568713df5e 470 PIRSF PIRSF036557 1 469 2.8E-144 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Gene3D G3DSA:3.30.465.10 186 350 1.5E-43 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 SUPERFAMILY SSF47741 93 162 2.09E-27 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily VEJY3_17086 0792f9650198c8155068c9568713df5e 470 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 358 458 1.7E-24 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal VEJY3_17086 0792f9650198c8155068c9568713df5e 470 Pfam PF01799 [2Fe-2S] binding domain 82 152 1.4E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 VEJY3_15986 f224984670198a0e8f37234ccdf178e2 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 1.1E-10 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEJY3_15986 f224984670198a0e8f37234ccdf178e2 206 Gene3D G3DSA:3.40.30.10 1 206 8.6E-44 T 14-10-2018 VEJY3_15986 f224984670198a0e8f37234ccdf178e2 206 SUPERFAMILY SSF52833 2 205 5.7E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_13345 bfa02fb8d6a761efc2667e468633a001 197 SUPERFAMILY SSF100950 5 196 8.51E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_13345 bfa02fb8d6a761efc2667e468633a001 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 3.3E-52 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEJY3_13345 bfa02fb8d6a761efc2667e468633a001 197 Gene3D G3DSA:3.40.50.10420 2 196 1.1E-56 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VEJY3_13345 bfa02fb8d6a761efc2667e468633a001 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 6.1E-43 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEJY3_13345 bfa02fb8d6a761efc2667e468633a001 197 PIRSF PIRSF006806 3 192 8.1E-37 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEJY3_20621 f9c0eb45d25818e914d0bf160a575b4e 129 SMART SM00422 4 71 9.8E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_20621 f9c0eb45d25818e914d0bf160a575b4e 129 SUPERFAMILY SSF46955 3 112 1.47E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_20621 f9c0eb45d25818e914d0bf160a575b4e 129 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_20621 f9c0eb45d25818e914d0bf160a575b4e 129 Gene3D G3DSA:1.10.1660.10 1 122 4.8E-26 T 14-10-2018 VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 Gene3D G3DSA:3.30.450.40 83 260 4.1E-61 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 SUPERFAMILY SSF46785 10 80 3.07E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.3E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 Gene3D G3DSA:1.10.10.10 4 77 4.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 SUPERFAMILY SSF55781 74 256 1.57E-51 T 14-10-2018 VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 2.4E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEJY3_16036 29b741885cac4dd6502bbf1deca7783f 260 SMART SM00346 10 99 5.4E-29 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 SUPERFAMILY SSF51182 53 178 2.08E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 SMART SM00530 13 68 3.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 Gene3D G3DSA:1.10.260.40 1 86 7.2E-20 T 14-10-2018 VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 Pfam PF01381 Helix-turn-helix 14 66 5.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 SUPERFAMILY SSF47413 8 73 1.6E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 Gene3D G3DSA:2.60.120.10 87 179 3.0E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_05355 5e0ebe4accfcd8ed86db6604a5568e34 179 Pfam PF07883 Cupin domain 126 168 1.5E-6 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 3.7E-38 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 SUPERFAMILY SSF53155 4 80 3.14E-18 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 Gene3D G3DSA:3.30.160.70 3 71 2.9E-16 T 14-10-2018 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 SUPERFAMILY SSF46767 75 156 2.75E-33 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 72 1.9E-5 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 Gene3D G3DSA:1.10.10.10 75 158 1.2E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.289 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VEJY3_15921 a15338f872e02c2a9b63363847a9a567 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 2.3E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEJY3_15826 b6d7ea7349d4093a20991c30c4af6bd8 257 Gene3D G3DSA:2.50.20.10 24 251 1.7E-37 T 14-10-2018 VEJY3_15826 b6d7ea7349d4093a20991c30c4af6bd8 257 PIRSF PIRSF028205 1 254 1.7E-109 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VEJY3_15826 b6d7ea7349d4093a20991c30c4af6bd8 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 250 4.5E-37 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.441 T 14-10-2018 IPR007376 dsDNA mimic, putative VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 4.0E-50 T 14-10-2018 IPR007376 dsDNA mimic, putative VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 PIRSF PIRSF004916 1 105 1.9E-52 T 14-10-2018 IPR007376 dsDNA mimic, putative VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 SUPERFAMILY SSF102816 3 105 1.03E-49 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 Gene3D G3DSA:3.10.450.140 5 105 1.3E-42 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VEJY3_10225 9b9a0204b744e73841828f6daa31342e 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.7E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 SMART SM00100 2 124 0.0011 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 Gene3D G3DSA:2.60.120.10 17 132 3.0E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 Gene3D G3DSA:3.30.565.10 291 443 4.8E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 SMART SM00387 329 440 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 SUPERFAMILY SSF55874 294 437 4.98E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 Pfam PF00027 Cyclic nucleotide-binding domain 21 100 4.0E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 Gene3D G3DSA:1.10.287.130 133 239 1.6E-10 T 14-10-2018 VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 3.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_06910 ce2022612750585e076eef643a7ad4d0 445 SUPERFAMILY SSF51206 14 132 1.83E-14 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_00355 20f082c74bc9afd39d724c16521965eb 375 Gene3D G3DSA:3.40.50.300 134 367 6.3E-33 T 14-10-2018 VEJY3_00355 20f082c74bc9afd39d724c16521965eb 375 Pfam PF13614 AAA domain 136 284 2.2E-7 T 14-10-2018 IPR025669 AAA domain VEJY3_00355 20f082c74bc9afd39d724c16521965eb 375 SUPERFAMILY SSF52172 18 125 4.67E-5 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_00355 20f082c74bc9afd39d724c16521965eb 375 Gene3D G3DSA:3.40.50.2300 6 124 1.9E-25 T 14-10-2018 VEJY3_00355 20f082c74bc9afd39d724c16521965eb 375 SUPERFAMILY SSF52540 135 362 1.78E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 Gene3D G3DSA:3.40.50.720 3 274 2.4E-144 T 14-10-2018 VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.1E-58 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.5E-140 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 Gene3D G3DSA:3.90.25.10 194 329 2.4E-144 T 14-10-2018 VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 SUPERFAMILY SSF51735 2 335 5.79E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 3.7E-5 T 14-10-2018 VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 3.7E-5 T 14-10-2018 VEJY3_21486 92eb7650262676c0b49b55ea8590a20d 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 3.7E-5 T 14-10-2018 VEJY3_00560 9b509e4f8f50fbbf1c5a6eea514a4847 185 Pfam PF13521 AAA domain 4 164 3.8E-41 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VEJY3_00560 9b509e4f8f50fbbf1c5a6eea514a4847 185 Gene3D G3DSA:3.40.50.300 1 169 1.9E-8 T 14-10-2018 VEJY3_00560 9b509e4f8f50fbbf1c5a6eea514a4847 185 SUPERFAMILY SSF52540 3 170 4.57E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 282 1.9E-82 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.606 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 Gene3D G3DSA:1.10.8.10 6 90 2.0E-26 T 14-10-2018 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 SUPERFAMILY SSF53335 7 279 1.73E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 4.1E-93 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 Gene3D G3DSA:3.40.50.150 91 282 1.1E-59 T 14-10-2018 VEJY3_03420 d7bad44dcec02e5dd89b6f7e949f9731 286 Pfam PF13847 Methyltransferase domain 117 247 4.7E-18 T 14-10-2018 IPR025714 Methyltransferase domain VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 64 7.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 Pfam PF03466 LysR substrate binding domain 92 297 1.8E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 Gene3D G3DSA:3.40.190.10 101 298 5.7E-46 T 14-10-2018 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 SUPERFAMILY SSF53850 92 303 1.38E-22 T 14-10-2018 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 Gene3D G3DSA:3.40.190.10 161 275 5.7E-46 T 14-10-2018 VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 SUPERFAMILY SSF46785 9 111 9.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02865 e3e381c1190a9db68ed4fd680f2a682b 305 Gene3D G3DSA:1.10.10.10 6 95 5.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 Gene3D G3DSA:3.40.50.12440 44 1244 0.0 T 14-10-2018 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 SUPERFAMILY SSF53706 4 1074 0.0 T 14-10-2018 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 Gene3D G3DSA:4.10.1200.10 1 28 3.9E-15 T 14-10-2018 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 SUPERFAMILY SSF50692 1081 1236 2.71E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 SMART SM00926 43 105 6.6E-8 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 Pfam PF00384 Molybdopterin oxidoreductase 108 831 4.6E-168 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 3.0E-14 T 14-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 VEJY3_21006 f1c4ada91fc61741c277ec5a7bc100f6 1254 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1198 9.4E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 305 319 3.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 3.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 3.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 3.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 3.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 SUPERFAMILY SSF51445 3 471 1.25E-161 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 Gene3D G3DSA:3.20.20.80 2 478 3.2E-164 T 14-10-2018 VEJY3_17241 26ce90018f89c1e6332fa7270f4a5d0c 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 2.9E-131 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 58 1.2E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 SMART SM00354 11 81 3.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 SUPERFAMILY SSF47413 10 70 4.44E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 Gene3D G3DSA:1.10.260.40 3 64 7.1E-21 T 14-10-2018 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 SUPERFAMILY SSF53822 68 319 1.31E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_08605 43990281787f0de73cbd68e919acff17 338 Pfam PF13377 Periplasmic binding protein-like domain 179 332 1.1E-16 T 14-10-2018 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 Gene3D G3DSA:3.40.50.2300 168 297 3.6E-44 T 14-10-2018 VEJY3_08605 43990281787f0de73cbd68e919acff17 338 Gene3D G3DSA:3.40.50.2300 65 311 3.6E-44 T 14-10-2018 VEJY3_01640 08597c666abf12ff5623c37ac86cb770 126 Gene3D G3DSA:2.60.40.1470 1 126 1.4E-47 T 14-10-2018 IPR036767 ApaG domain superfamily VEJY3_01640 08597c666abf12ff5623c37ac86cb770 126 SUPERFAMILY SSF110069 5 126 1.26E-47 T 14-10-2018 IPR036767 ApaG domain superfamily VEJY3_01640 08597c666abf12ff5623c37ac86cb770 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.061 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG VEJY3_01640 08597c666abf12ff5623c37ac86cb770 126 Pfam PF04379 ApaG domain 18 103 4.9E-34 T 14-10-2018 IPR007474 ApaG domain VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 SUPERFAMILY SSF51735 5 237 3.25E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 Gene3D G3DSA:3.40.50.720 4 239 2.8E-64 T 14-10-2018 VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 5.0E-4 T 14-10-2018 VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 Pfam PF00106 short chain dehydrogenase 5 188 5.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_24206 345d0e40df98e17d7563fc6d3be48ebf 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 Gene3D G3DSA:3.40.640.10 60 236 2.0E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 Gene3D G3DSA:1.10.260.50 14 272 2.0E-115 T 14-10-2018 VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 PIRSF PIRSF005572 2 348 2.2E-100 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 Gene3D G3DSA:3.90.1150.10 4 345 2.0E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 SUPERFAMILY SSF53383 4 347 3.58E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_05205 23e5af2c4cc66bcc8383ebe6c6254d39 350 Pfam PF00266 Aminotransferase class-V 4 346 1.9E-66 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Gene3D G3DSA:3.10.50.30 77 158 2.4E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 PIRSF PIRSF006092 2 158 6.3E-43 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.1E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.079 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 5.0E-23 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 SUPERFAMILY SSF54534 80 156 3.79E-19 T 14-10-2018 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 SUPERFAMILY SSF46557 3 78 1.57E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Gene3D G3DSA:1.10.287.180 1 76 8.0E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_00705 dcde69fd5551e76fe5322f3da7807024 167 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.791 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VEJY3_05965 1e6f031e044ae1a69d87072eacf38b9c 413 SUPERFAMILY SSF56796 1 381 6.93E-89 T 14-10-2018 VEJY3_05965 1e6f031e044ae1a69d87072eacf38b9c 413 Gene3D G3DSA:3.40.50.1970 1 180 3.4E-47 T 14-10-2018 VEJY3_05965 1e6f031e044ae1a69d87072eacf38b9c 413 Gene3D G3DSA:1.20.1090.10 184 382 1.9E-41 T 14-10-2018 VEJY3_05965 1e6f031e044ae1a69d87072eacf38b9c 413 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 9.1E-90 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_21516 598ae5263979d688b695f81421d69339 288 SUPERFAMILY SSF53328 91 286 1.96E-61 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PIRSF PIRSF036480 5 287 1.7E-102 T 14-10-2018 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 114 141 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 238 260 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 260 285 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 92 114 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.0E-42 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 Gene3D G3DSA:3.30.70.260 2 90 6.0E-20 T 14-10-2018 VEJY3_21516 598ae5263979d688b695f81421d69339 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 286 44.063 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_21516 598ae5263979d688b695f81421d69339 288 Gene3D G3DSA:3.40.50.170 91 286 4.8E-74 T 14-10-2018 VEJY3_21516 598ae5263979d688b695f81421d69339 288 Pfam PF00551 Formyl transferase 91 267 1.8E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_21516 598ae5263979d688b695f81421d69339 288 SUPERFAMILY SSF55021 7 85 7.56E-8 T 14-10-2018 VEJY3_11715 a44a6b40527710dae7e4d6987ee72a26 467 Pfam PF00589 Phage integrase family 267 443 5.6E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_11715 a44a6b40527710dae7e4d6987ee72a26 467 SUPERFAMILY SSF56349 161 445 6.47E-24 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_11715 a44a6b40527710dae7e4d6987ee72a26 467 Gene3D G3DSA:1.10.443.10 235 457 6.3E-26 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 PIRSF PIRSF002786 1 328 4.3E-64 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 SUPERFAMILY SSF158544 101 213 4.71E-32 T 14-10-2018 IPR038072 GspK, central domain superfamily VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 SUPERFAMILY SSF54523 36 325 1.57E-35 T 14-10-2018 VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 Gene3D G3DSA:1.10.40.60 99 215 1.4E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 SUPERFAMILY SSF158544 215 283 5.75E-19 T 14-10-2018 IPR038072 GspK, central domain superfamily VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 318 2.2E-86 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 Gene3D G3DSA:3.30.1300.30 43 309 1.4E-88 T 14-10-2018 VEJY3_00645 6c7a66f7617bb94d103444cce8b5500c 336 Gene3D G3DSA:1.10.40.60 216 285 1.4E-88 T 14-10-2018 IPR038072 GspK, central domain superfamily VEJY3_16341 eb2731498d7803febdc151f5a1a9aecb 243 SMART SM00849 1 197 1.0E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_16341 eb2731498d7803febdc151f5a1a9aecb 243 Gene3D G3DSA:3.60.15.10 1 227 5.0E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_16341 eb2731498d7803febdc151f5a1a9aecb 243 Pfam PF00753 Metallo-beta-lactamase superfamily 2 197 2.9E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_16341 eb2731498d7803febdc151f5a1a9aecb 243 SUPERFAMILY SSF56281 1 238 1.14E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.9E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 7.0E-161 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:1.20.1640.10 16 501 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82693 150 325 6.28E-9 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:1.20.1640.10 502 1013 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.2090.10 708 795 3.3E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.70.1440 660 856 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.70.1430 46 803 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.70.1320 139 327 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.2090.10 180 270 3.3E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82714 185 266 3.53E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 Gene3D G3DSA:3.30.70.1430 559 659 3.3E-255 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82714 719 793 4.45E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82866 292 488 1.1E-36 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82866 791 1019 1.7E-49 T 14-10-2018 VEJY3_16841 384bcb6a8ee6f34a23e4cc4e951e1977 1052 SUPERFAMILY SSF82693 46 138 2.04E-19 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82693 554 657 1.05E-16 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 7.3E-278 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82866 794 1008 6.67E-47 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82693 139 324 1.31E-18 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82714 704 788 5.23E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82714 183 266 4.71E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82693 40 134 7.06E-25 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 SUPERFAMILY SSF82866 290 488 5.36E-45 T 14-10-2018 VEJY3_04320 bdc058e1cb775224550903203e337a17 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 Pfam PF03958 Bacterial type II/III secretion system short domain 244 309 1.5E-11 T 14-10-2018 IPR005644 NolW-like VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 511 544 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 Pfam PF00263 Bacterial type II and III secretion system protein 407 565 2.4E-46 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 Gene3D G3DSA:2.60.40.3470 18 127 1.4E-14 T 14-10-2018 VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 553 567 6.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 309 319 6.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 427 6.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 530 548 6.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 PRINTS PR00811 Bacterial general secretion pathway protein D signature 438 448 6.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 Gene3D G3DSA:3.30.1370.120 242 305 6.7E-11 T 14-10-2018 IPR038591 NolW-like superfamily VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 Gene3D G3DSA:3.55.50.30 128 241 4.6E-36 T 14-10-2018 VEJY3_14050 496b0b3a928dd302f7a23a57e2798615 567 SMART SM00965 170 218 7.6E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VEJY3_17956 dd6092a6856ea83152a577543c21ac0e 348 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 309 5.1E-101 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEJY3_17956 dd6092a6856ea83152a577543c21ac0e 348 SUPERFAMILY SSF51735 3 337 3.34E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17956 dd6092a6856ea83152a577543c21ac0e 348 PIRSF PIRSF001439 22 323 8.2E-56 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEJY3_17956 dd6092a6856ea83152a577543c21ac0e 348 Gene3D G3DSA:3.30.1780.10 17 333 1.6E-127 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 VEJY3_17956 dd6092a6856ea83152a577543c21ac0e 348 Gene3D G3DSA:3.40.50.720 126 295 1.6E-127 T 14-10-2018 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Gene3D G3DSA:3.90.1440.10 229 369 1.6E-176 T 14-10-2018 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SUPERFAMILY SSF52540 5 416 4.4E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.2E-37 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SUPERFAMILY SSF52540 418 610 2.96E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SUPERFAMILY SSF81767 227 369 2.09E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Gene3D G3DSA:1.10.3060.10 621 833 3.8E-76 T 14-10-2018 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Pfam PF07517 SecA DEAD-like domain 7 403 8.6E-134 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SMART SM00958 228 359 4.6E-79 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Pfam PF02810 SEC-C motif 888 906 3.3E-10 T 14-10-2018 IPR004027 SEC-C motif VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Gene3D G3DSA:3.40.50.300 418 620 8.4E-87 T 14-10-2018 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 SUPERFAMILY SSF81886 620 896 7.98E-84 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Gene3D G3DSA:3.40.50.300 22 416 1.6E-176 T 14-10-2018 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.8E-66 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VEJY3_02115 832ce8c5440932b30fdf91131294115a 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.037 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEJY3_02225 5ecf8db1cdf0d1db3a9ed8082ef5fe44 156 PIRSF PIRSF028680 1 156 7.2E-72 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VEJY3_02225 5ecf8db1cdf0d1db3a9ed8082ef5fe44 156 SUPERFAMILY SSF56935 36 150 1.92E-6 T 14-10-2018 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 Pfam PF03466 LysR substrate binding domain 90 284 7.7E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 SUPERFAMILY SSF46785 3 111 6.66E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 Gene3D G3DSA:3.40.190.290 92 292 1.2E-35 T 14-10-2018 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 Gene3D G3DSA:1.10.10.10 3 89 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 SUPERFAMILY SSF53850 90 285 7.87E-38 T 14-10-2018 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20021 1c472e87df4223d7d0fa03b6a66257a0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19911 58f498f059a2b7ace32ecf1af651676e 200 SUPERFAMILY SSF52266 22 199 7.94E-50 T 14-10-2018 VEJY3_19911 58f498f059a2b7ace32ecf1af651676e 200 Gene3D G3DSA:3.40.50.1110 20 200 2.6E-61 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VEJY3_19911 58f498f059a2b7ace32ecf1af651676e 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 7.3E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VEJY3_19911 58f498f059a2b7ace32ecf1af651676e 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 Gene3D G3DSA:1.10.10.10 1 88 4.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 Pfam PF03466 LysR substrate binding domain 87 288 1.1E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 SUPERFAMILY SSF46785 2 85 4.63E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 SUPERFAMILY SSF53850 90 291 1.09E-42 T 14-10-2018 VEJY3_18021 ea59ceac56fdde6a82717a99e5116753 295 Gene3D G3DSA:3.40.190.290 90 291 2.4E-50 T 14-10-2018 VEJY3_07790 8e2bc63d85d86cffc1d89d57562f1a7f 149 SUPERFAMILY SSF55729 1 139 1.95E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_07790 8e2bc63d85d86cffc1d89d57562f1a7f 149 Gene3D G3DSA:3.40.630.30 1 148 6.2E-35 T 14-10-2018 VEJY3_07790 8e2bc63d85d86cffc1d89d57562f1a7f 149 Pfam PF13302 Acetyltransferase (GNAT) domain 1 139 1.1E-29 T 14-10-2018 IPR000182 GNAT domain VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 SUPERFAMILY SSF46785 1 87 6.31E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 Gene3D G3DSA:1.10.10.10 1 84 3.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 Pfam PF03466 LysR substrate binding domain 87 283 2.5E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 SUPERFAMILY SSF53850 88 291 1.27E-26 T 14-10-2018 VEJY3_19646 85a244c28275bd4c6e87b259ff7c534b 293 Gene3D G3DSA:3.40.190.290 91 291 3.4E-28 T 14-10-2018 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 146 234 6.1E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.5E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 SUPERFAMILY SSF56645 121 356 8.12E-43 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Gene3D G3DSA:1.20.140.10 361 508 6.7E-100 T 14-10-2018 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Gene3D G3DSA:2.40.110.10 237 360 6.7E-100 T 14-10-2018 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 3.3E-116 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 Gene3D G3DSA:1.10.540.10 123 236 6.7E-100 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_11930 f0744bf707153ea3a896694ec6f77c0f 814 SUPERFAMILY SSF47203 361 508 7.09E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_20711 0757e691bb5061695069242905360b2f 256 Gene3D G3DSA:2.60.120.10 9 91 1.9E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_20711 0757e691bb5061695069242905360b2f 256 SUPERFAMILY SSF51182 8 179 5.78E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_20711 0757e691bb5061695069242905360b2f 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 3.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_20711 0757e691bb5061695069242905360b2f 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 3.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_20711 0757e691bb5061695069242905360b2f 256 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 248 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_20711 0757e691bb5061695069242905360b2f 256 Pfam PF12833 Helix-turn-helix domain 176 253 2.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_20711 0757e691bb5061695069242905360b2f 256 SMART SM00342 170 252 8.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_20711 0757e691bb5061695069242905360b2f 256 Gene3D G3DSA:1.10.10.60 152 255 3.6E-20 T 14-10-2018 VEJY3_20711 0757e691bb5061695069242905360b2f 256 SUPERFAMILY SSF46689 212 253 9.26E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09255 278eb45eadffda6446aa42c5f74d913f 417 Gene3D G3DSA:3.40.190.10 44 349 7.1E-60 T 14-10-2018 VEJY3_09255 278eb45eadffda6446aa42c5f74d913f 417 SUPERFAMILY SSF53850 22 400 1.04E-56 T 14-10-2018 VEJY3_09255 278eb45eadffda6446aa42c5f74d913f 417 Pfam PF01547 Bacterial extracellular solute-binding protein 39 330 1.3E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_09255 278eb45eadffda6446aa42c5f74d913f 417 Gene3D G3DSA:3.40.190.10 131 364 7.1E-60 T 14-10-2018 VEJY3_01415 de8be5bb4659121245c66b95be5886e6 158 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 38 151 3.3E-30 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VEJY3_12625 f6658ee608136062056a7cc9f8be88ab 151 SUPERFAMILY SSF55729 1 147 2.57E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_12625 f6658ee608136062056a7cc9f8be88ab 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 5.8E-35 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VEJY3_12625 f6658ee608136062056a7cc9f8be88ab 151 Gene3D G3DSA:3.40.630.30 3 149 4.5E-36 T 14-10-2018 VEJY3_12625 f6658ee608136062056a7cc9f8be88ab 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.2E-11 T 14-10-2018 IPR000182 GNAT domain VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 SUPERFAMILY SSF48435 30 478 1.57E-127 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 408 473 1.8E-23 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 Pfam PF01464 Transglycosylase SLT domain 486 597 2.9E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 SUPERFAMILY SSF53955 481 640 3.64E-47 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 Gene3D G3DSA:1.10.530.10 474 645 4.7E-49 T 14-10-2018 VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 Gene3D G3DSA:1.10.1240.20 406 473 3.3E-21 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VEJY3_02490 b91bf69ce3b34a219d97542ab6481d0b 645 Gene3D G3DSA:1.25.20.10 30 391 7.7E-101 T 14-10-2018 VEJY3_03325 b222c5660791fc70c515893db99310a8 156 SUPERFAMILY SSF75217 1 154 1.57E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_03325 b222c5660791fc70c515893db99310a8 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 7.6E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEJY3_03325 b222c5660791fc70c515893db99310a8 156 PIRSF PIRSF004505 1 155 1.4E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEJY3_03325 b222c5660791fc70c515893db99310a8 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.853 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEJY3_03325 b222c5660791fc70c515893db99310a8 156 Gene3D G3DSA:3.40.1280.10 1 156 4.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_02155 0fc4f9acf6f5c3bcee4f957fcce1771e 274 Pfam PF01497 Periplasmic binding protein 25 246 1.7E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_02155 0fc4f9acf6f5c3bcee4f957fcce1771e 274 Gene3D G3DSA:3.40.50.1980 142 270 1.2E-29 T 14-10-2018 VEJY3_02155 0fc4f9acf6f5c3bcee4f957fcce1771e 274 SUPERFAMILY SSF53807 21 267 1.3E-56 T 14-10-2018 VEJY3_02155 0fc4f9acf6f5c3bcee4f957fcce1771e 274 Gene3D G3DSA:3.40.50.1980 21 139 1.1E-33 T 14-10-2018 VEJY3_02155 0fc4f9acf6f5c3bcee4f957fcce1771e 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 49.801 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VEJY3_16361 ddf53a0e7643c88a7eae7ba09cd08251 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 6.2E-32 T 14-10-2018 IPR007416 Protein of unknown function DUF469 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 SMART SM00830 9 89 1.3E-28 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 SUPERFAMILY SSF51735 91 237 9.84E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 PIRSF PIRSF001499 1 374 4.8E-184 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 Pfam PF02153 Prephenate dehydrogenase 138 345 6.0E-32 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 Pfam PF01817 Chorismate mutase type II 9 87 3.1E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 SUPERFAMILY SSF48179 241 366 2.95E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 Gene3D G3DSA:1.10.3660.10 248 373 3.3E-48 T 14-10-2018 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 Gene3D G3DSA:3.40.50.720 81 247 6.4E-44 T 14-10-2018 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 Gene3D G3DSA:1.20.59.10 1 80 3.8E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02475 1e3318877dc4dfbc071b56f2c61ed9e9 375 SUPERFAMILY SSF48600 4 88 1.14E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 PIRSF PIRSF500176 2 333 4.0E-108 T 14-10-2018 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 SMART SM00870 5 324 1.7E-139 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 SUPERFAMILY SSF53774 3 336 6.41E-114 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 Gene3D G3DSA:3.40.50.1170 1 209 4.1E-92 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 Gene3D G3DSA:3.40.50.40 210 337 3.8E-45 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 Pfam PF00710 Asparaginase, N-terminal 5 191 8.9E-67 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VEJY3_11135 a146da8f93bd84088647c014383044b8 337 PIRSF PIRSF001220 1 335 7.7E-95 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 6.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 466 1.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SMART SM00388 240 305 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Gene3D G3DSA:1.20.1480.50 138 229 5.2E-5 T 14-10-2018 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Pfam PF01627 Hpt domain 673 735 1.1E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Gene3D G3DSA:1.20.120.160 643 759 1.5E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Gene3D G3DSA:1.10.287.130 230 306 2.1E-20 T 14-10-2018 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Pfam PF00072 Response regulator receiver domain 492 606 8.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SMART SM00304 173 225 1.9E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SUPERFAMILY SSF52172 488 611 6.12E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SUPERFAMILY SSF47384 226 305 3.14E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SUPERFAMILY SSF55874 294 465 1.96E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Gene3D G3DSA:3.40.50.2300 477 615 1.0E-42 T 14-10-2018 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SMART SM00448 490 605 2.1E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 Gene3D G3DSA:3.30.565.10 307 472 3.9E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 2.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 2.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 2.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SMART SM00387 352 468 3.4E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08720 8ad5aff44cbac12c97f93e5a4f0854a1 770 SUPERFAMILY SSF47226 649 758 8.11E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.962 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 Gene3D G3DSA:1.10.1220.10 98 149 3.2E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 1.0E-69 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 Gene3D G3DSA:1.20.1270.380 1 89 6.5E-48 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily VEJY3_07550 51647c7d55619681e487e9b6dbc73373 149 Pfam PF06303 MatP N-terminal domain 2 85 9.1E-43 T 14-10-2018 IPR035087 MatP, N-terminal VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Gene3D G3DSA:3.30.70.870 390 459 9.8E-17 T 14-10-2018 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Gene3D G3DSA:2.40.30.10 268 389 2.2E-26 T 14-10-2018 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Pfam PF14492 Elongation Factor G, domain II 382 454 4.7E-22 T 14-10-2018 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Gene3D G3DSA:3.30.230.10 463 666 2.9E-75 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Gene3D G3DSA:3.30.70.240 582 653 2.9E-75 T 14-10-2018 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SMART SM00889 458 576 2.6E-53 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SUPERFAMILY SSF52540 2 259 1.08E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Pfam PF00679 Elongation factor G C-terminus 579 665 2.1E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SUPERFAMILY SSF54980 381 457 1.29E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SMART SM00838 578 666 1.8E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Pfam PF03764 Elongation factor G, domain IV 457 575 3.9E-36 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SUPERFAMILY SSF54980 579 668 1.44E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 2.5E-27 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SUPERFAMILY SSF54211 457 577 2.45E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 SUPERFAMILY SSF50447 243 371 1.24E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_16796 b42b7c7d5eace9c8b404799d8bed2da6 674 Gene3D G3DSA:3.40.50.300 1 264 1.5E-49 T 14-10-2018 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 Pfam PF13458 Periplasmic binding protein 34 367 7.2E-55 T 14-10-2018 IPR028081 Leucine-binding protein domain VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 SUPERFAMILY SSF53822 34 393 3.53E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 Gene3D G3DSA:3.40.50.2300 156 284 6.0E-75 T 14-10-2018 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 Gene3D G3DSA:3.40.50.2300 36 360 6.0E-75 T 14-10-2018 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 76 94 1.7E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 1.7E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 35 51 1.7E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VEJY3_16476 270190d83c2591c3fdcfba5a487aeff4 394 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 305 318 1.7E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 Gene3D G3DSA:3.40.630.10 9 364 7.2E-128 T 14-10-2018 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.7E-46 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 SUPERFAMILY SSF55031 181 291 2.54E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 SUPERFAMILY SSF53187 6 376 3.67E-67 T 14-10-2018 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 Pfam PF07687 Peptidase dimerisation domain 177 284 5.1E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.883 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VEJY3_11675 eb7763daf203c155de959f19d49200b1 378 Gene3D G3DSA:3.30.70.360 181 294 7.2E-128 T 14-10-2018 VEJY3_03760 6e2a695c38bd98a6fd24fb4587f0dd5a 529 SUPERFAMILY SSF51735 387 518 1.18E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03760 6e2a695c38bd98a6fd24fb4587f0dd5a 529 Pfam PF02254 TrkA-N domain 388 504 2.1E-15 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_03760 6e2a695c38bd98a6fd24fb4587f0dd5a 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 348 2.3E-40 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_03760 6e2a695c38bd98a6fd24fb4587f0dd5a 529 Gene3D G3DSA:1.20.1530.20 2 362 1.1E-45 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_03760 6e2a695c38bd98a6fd24fb4587f0dd5a 529 Gene3D G3DSA:3.40.50.720 379 529 9.2E-30 T 14-10-2018 VEJY3_12415 a3c9b569dff6606884cdad0d7ea52d3f 394 Pfam PF05940 NnrS protein 16 388 3.0E-106 T 14-10-2018 IPR010266 NnrS VEJY3_18151 40a55222ca734d57e6e77ff73355592c 428 PIRSF PIRSF006066 5 428 1.0E-92 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_18151 40a55222ca734d57e6e77ff73355592c 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 422 5.1E-95 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 3.1E-27 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Gene3D G3DSA:3.30.70.100 89 173 5.9E-14 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 1.6E-29 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Gene3D G3DSA:3.40.1110.10 511 614 5.3E-68 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 SUPERFAMILY SSF56784 500 781 6.19E-48 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.5E-5 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.5E-5 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.5E-5 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.5E-5 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Gene3D G3DSA:3.40.50.1000 482 720 5.3E-68 T 14-10-2018 IPR023214 HAD superfamily VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 SUPERFAMILY SSF81653 318 402 1.05E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.6E-24 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 4.6E-24 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 4.6E-24 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 4.6E-24 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.6E-24 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 SUPERFAMILY SSF81665 250 765 1.23E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Gene3D G3DSA:2.70.150.20 292 407 1.4E-32 T 14-10-2018 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 SUPERFAMILY SSF55008 85 160 9.56E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Pfam PF00403 Heavy-metal-associated domain 93 154 2.9E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEJY3_07345 6ebc0a167a1d181e439b024ad5532564 787 Pfam PF00122 E1-E2 ATPase 318 478 1.7E-45 T 14-10-2018 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 Gene3D G3DSA:3.90.226.10 4 207 2.3E-85 T 14-10-2018 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.544 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 Pfam PF00574 Clp protease 25 205 6.8E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VEJY3_04205 7f2fb8b4441c7613c2e9ed5942ca6fdd 208 SUPERFAMILY SSF52096 23 206 1.28E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.9E-20 T 14-10-2018 VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 SMART SM00829 12 312 5.7E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 SUPERFAMILY SSF50129 4 154 7.76E-37 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 SUPERFAMILY SSF51735 123 241 3.41E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 Gene3D G3DSA:3.90.180.10 10 310 3.1E-95 T 14-10-2018 VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 1.7E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_13120 b104205c4714b04241582a84b19a8e8a 316 Gene3D G3DSA:3.40.50.720 133 263 3.1E-95 T 14-10-2018 VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 2.0E-68 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 Pfam PF01668 SmpB protein 15 157 1.7E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 SUPERFAMILY SSF74982 8 139 4.32E-48 T 14-10-2018 IPR023620 Small protein B VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 Gene3D G3DSA:2.40.280.10 7 136 1.3E-43 T 14-10-2018 IPR023620 Small protein B VEJY3_02960 78fd87db46ea9f0f42975785cd858601 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.264 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 Gene3D G3DSA:3.30.160.390 6 94 2.2E-15 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 Gene3D G3DSA:1.10.443.10 215 393 5.9E-12 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 Pfam PF13356 Arm DNA-binding domain 7 90 6.2E-10 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 Gene3D G3DSA:1.10.150.130 97 186 4.6E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 SUPERFAMILY SSF56349 101 385 5.89E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_05025 7c65c0fcc9f380bf90bb8221273510ce 421 Pfam PF00589 Phage integrase family 229 377 4.5E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Gene3D G3DSA:3.30.830.10 507 716 8.3E-16 T 14-10-2018 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Gene3D G3DSA:3.30.830.10 263 467 1.7E-9 T 14-10-2018 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 SUPERFAMILY SSF63411 756 914 2.27E-16 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 SUPERFAMILY SSF63411 27 241 1.92E-39 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 SUPERFAMILY SSF63411 494 713 1.64E-25 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Pfam PF05193 Peptidase M16 inactive domain 668 847 1.1E-6 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Pfam PF05193 Peptidase M16 inactive domain 202 374 9.5E-12 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Pfam PF00675 Insulinase (Peptidase family M16) 47 163 6.8E-22 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Gene3D G3DSA:3.30.830.10 743 917 1.3E-14 T 14-10-2018 VEJY3_24016 05d1226286892a2798de618a1b949b7a 917 Gene3D G3DSA:3.30.830.10 29 250 7.5E-56 T 14-10-2018 VEJY3_24111 4d11af4afc6be10db17328568aece134 703 Gene3D G3DSA:2.40.170.20 182 703 1.4E-112 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_24111 4d11af4afc6be10db17328568aece134 703 Gene3D G3DSA:2.170.130.10 55 176 7.0E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_24111 4d11af4afc6be10db17328568aece134 703 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 14-10-2018 IPR010916 TonB box, conserved site VEJY3_24111 4d11af4afc6be10db17328568aece134 703 SUPERFAMILY SSF56935 35 703 2.93E-120 T 14-10-2018 VEJY3_24111 4d11af4afc6be10db17328568aece134 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 168 3.1E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_24111 4d11af4afc6be10db17328568aece134 703 Pfam PF00593 TonB dependent receptor 256 702 1.9E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_00835 ad661904bb8a02e5de2ba9ff666d2b2e 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.4E-117 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VEJY3_00835 ad661904bb8a02e5de2ba9ff666d2b2e 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 4.4E-43 T 14-10-2018 IPR013527 YicC-like, N-terminal VEJY3_00835 ad661904bb8a02e5de2ba9ff666d2b2e 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 SUPERFAMILY SSF161093 280 450 3.4E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Gene3D G3DSA:1.10.357.20 277 451 1.5E-44 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Pfam PF03448 MgtE intracellular N domain 36 137 1.2E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 SUPERFAMILY SSF158791 12 136 8.5E-30 T 14-10-2018 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Gene3D G3DSA:1.25.60.10 8 134 1.4E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Pfam PF00571 CBS domain 213 257 6.5E-5 T 14-10-2018 IPR000644 CBS domain VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Pfam PF00571 CBS domain 140 189 0.0014 T 14-10-2018 IPR000644 CBS domain VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Gene3D G3DSA:3.10.580.10 135 262 3.5E-37 T 14-10-2018 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 SMART SM00924 36 139 3.2E-35 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 SUPERFAMILY SSF54631 138 278 5.31E-27 T 14-10-2018 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 Pfam PF01769 Divalent cation transporter 323 444 4.6E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEJY3_13720 d88b00eeb2bc9020d778aa6136d42a38 451 SMART SM00116 212 258 0.0024 T 14-10-2018 IPR000644 CBS domain VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Gene3D G3DSA:3.90.105.10 31 178 8.8E-146 T 14-10-2018 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 SUPERFAMILY SSF63882 7 180 4.32E-57 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Gene3D G3DSA:3.40.980.10 179 331 8.8E-146 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 4.4E-48 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 5.4E-26 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 SUPERFAMILY SSF53218 181 327 5.37E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Gene3D G3DSA:2.40.340.10 332 401 8.8E-146 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 3.1E-19 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 SMART SM00852 184 321 6.1E-43 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 SUPERFAMILY SSF63867 332 410 5.1E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_17761 e5b0c5ba19744fe8e354ece49f9e1da0 411 Gene3D G3DSA:2.170.190.11 53 145 8.8E-146 T 14-10-2018 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 ProSitePatterns PS01068 OmpA-like domain. 280 324 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 SUPERFAMILY SSF103088 226 347 2.62E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 Pfam PF01389 OmpA-like transmembrane domain 48 217 3.2E-33 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 Pfam PF00691 OmpA family 249 342 5.1E-25 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 SUPERFAMILY SSF56925 45 217 2.41E-32 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 Gene3D G3DSA:3.30.1330.60 234 357 7.4E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 Gene3D G3DSA:2.40.160.20 35 233 4.7E-54 T 14-10-2018 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 PRINTS PR01022 Outer membrane protein A signature 201 215 8.8E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 PRINTS PR01022 Outer membrane protein A signature 129 145 8.8E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 PRINTS PR01022 Outer membrane protein A signature 302 321 8.8E-8 T 14-10-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 PRINTS PR01021 OMPA domain signature 278 293 3.5E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_22566 4ac3055547a2676fb503c5f6b9331a4c 365 PRINTS PR01021 OMPA domain signature 293 309 3.5E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 PIRSF PIRSF000378 2 125 4.1E-54 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 SUPERFAMILY SSF51998 64 124 1.65E-23 T 14-10-2018 VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.711 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 Gene3D G3DSA:3.20.70.20 6 125 1.7E-25 T 14-10-2018 VEJY3_02245 efe13c1ced80dec744c5fb6095b7266e 125 Pfam PF01228 Glycine radical 16 106 4.5E-22 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VEJY3_18146 766b7dca476728eea91f741dd0f23cee 305 Pfam PF12706 Beta-lactamase superfamily domain 59 274 8.9E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_18146 766b7dca476728eea91f741dd0f23cee 305 SUPERFAMILY SSF56281 31 304 2.84E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_18146 766b7dca476728eea91f741dd0f23cee 305 Gene3D G3DSA:3.60.15.10 30 305 7.3E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_18146 766b7dca476728eea91f741dd0f23cee 305 SMART SM00849 46 273 7.3E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 5.8E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 SUPERFAMILY SSF100950 78 232 7.12E-22 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 SMART SM01134 74 235 1.3E-46 T 14-10-2018 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 7.0E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 7.0E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 SMART SM00420 9 61 8.1E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 Pfam PF00455 DeoR C terminal sensor domain 77 231 6.5E-37 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 SUPERFAMILY SSF46785 7 62 6.08E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06555 9422981ed944b3717f3d85b1441ce27a 256 Gene3D G3DSA:1.10.10.10 1 57 2.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00955 325744ac2ff50de3f528195037ba859f 313 Gene3D G3DSA:3.90.25.10 173 295 1.4E-114 T 14-10-2018 VEJY3_00955 325744ac2ff50de3f528195037ba859f 313 Gene3D G3DSA:3.40.50.720 3 307 1.4E-114 T 14-10-2018 VEJY3_00955 325744ac2ff50de3f528195037ba859f 313 SUPERFAMILY SSF51735 1 308 9.51E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_00955 325744ac2ff50de3f528195037ba859f 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.138 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VEJY3_00955 325744ac2ff50de3f528195037ba859f 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.0E-43 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 SUPERFAMILY SSF51261 474 617 7.15E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 480 605 7.0E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 Pfam PF02378 Phosphotransferase system, EIIC 108 390 5.8E-27 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 Gene3D G3DSA:3.30.1360.60 3 81 6.3E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 Pfam PF00367 phosphotransferase system, EIIB 12 39 1.9E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 Gene3D G3DSA:2.70.70.10 471 625 2.0E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 543 555 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 23 40 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_17246 88326f8a7f1edaa0f3764ed93bdfc747 629 SUPERFAMILY SSF55604 10 84 1.27E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Gene3D G3DSA:3.40.1440.10 6 102 5.5E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SUPERFAMILY SSF47781 521 609 3.5E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Gene3D G3DSA:3.30.420.340 380 552 2.0E-45 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.487 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Pfam PF02151 UvrB/uvrC motif 205 238 8.5E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.0E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 9.6E-44 T 14-10-2018 IPR001162 UvrC family homology region VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SMART SM00278 556 575 0.24 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SMART SM00278 588 607 300.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Gene3D G3DSA:1.10.150.20 555 610 1.1E-24 T 14-10-2018 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SMART SM00465 17 98 9.5E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease VEJY3_10200 721e091b303beb770d9192a344a678c8 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.1E-9 T 14-10-2018 VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SUPERFAMILY SSF46600 190 243 1.18E-12 T 14-10-2018 IPR036876 UVR domain superfamily VEJY3_10200 721e091b303beb770d9192a344a678c8 610 SUPERFAMILY SSF82771 16 100 1.96E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 SUPERFAMILY SSF46894 308 370 4.42E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 313 327 8.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 327 343 8.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 343 355 8.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 Gene3D G3DSA:1.10.10.10 313 370 2.4E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 Pfam PF00196 Bacterial regulatory proteins, luxR family 314 363 3.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18131 643b6c2b5783f455043da09fa4cfc419 376 SMART SM00421 310 367 3.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 SUPERFAMILY SSF56954 157 273 8.63E-5 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 SUPERFAMILY SSF111369 64 141 4.97E-5 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Gene3D G3DSA:2.40.50.100 69 104 3.9E-7 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Gene3D G3DSA:1.10.287.470 105 124 3.9E-7 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Pfam PF13437 HlyD family secretion protein 316 427 2.4E-17 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 8.4E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Gene3D G3DSA:1.10.287.470 192 316 4.1E-13 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Gene3D G3DSA:2.40.30.170 354 441 4.1E-13 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Gene3D G3DSA:2.40.50.100 317 353 4.1E-13 T 14-10-2018 VEJY3_24326 592d71b21923f969d8f5458a210960a6 463 Pfam PF13533 Biotin-lipoyl like 75 108 1.8E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 SUPERFAMILY SSF82689 172 269 6.67E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 Pfam PF00924 Mechanosensitive ion channel 63 257 9.1E-53 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 Gene3D G3DSA:2.30.30.60 121 170 1.5E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 SUPERFAMILY SSF82861 20 104 2.35E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 SUPERFAMILY SSF50182 105 171 5.23E-15 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_20741 a1fc29088ce80811e12d07214a9059ef 279 Gene3D G3DSA:3.30.70.100 171 264 1.9E-23 T 14-10-2018 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 SMART SM00448 4 117 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 SUPERFAMILY SSF46894 132 198 1.87E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 SMART SM00421 139 196 1.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 1.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 Gene3D G3DSA:3.40.50.2300 4 131 3.3E-25 T 14-10-2018 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 SUPERFAMILY SSF52172 1 125 3.13E-27 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 Gene3D G3DSA:1.10.10.10 132 198 8.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 Pfam PF00072 Response regulator receiver domain 7 117 4.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19141 0c6f0f744379972200c5a71c6af0092e 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_14715 ba83bf0d0cedf7eca3112a5272fc3648 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 2.0E-55 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 VEJY3_14715 ba83bf0d0cedf7eca3112a5272fc3648 232 PIRSF PIRSF028160 1 232 5.0E-117 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SMART SM00482 687 894 1.6E-112 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Pfam PF00476 DNA polymerase family A 553 927 3.0E-156 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 269 3.0E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SUPERFAMILY SSF88723 7 170 2.45E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:3.30.70.370 665 926 1.2E-112 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SUPERFAMILY SSF47807 171 291 1.79E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SUPERFAMILY SSF53098 334 519 1.86E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:3.30.420.10 328 543 6.3E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Pfam PF01612 3'-5' exonuclease 331 515 3.7E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:3.40.50.1010 9 284 8.5E-95 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SUPERFAMILY SSF56672 523 930 2.11E-158 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.0E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SMART SM00474 331 518 9.2E-43 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:1.10.150.20 174 253 8.5E-95 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:1.20.1060.10 544 659 7.7E-44 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 Gene3D G3DSA:1.10.150.20 710 853 1.2E-112 T 14-10-2018 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VEJY3_00490 366b7acac6bee5fd0e87b581d6e7dc7e 930 SMART SM00475 7 267 2.0E-123 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Gene3D G3DSA:3.40.50.740 157 186 2.6E-5 T 14-10-2018 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Gene3D G3DSA:2.40.40.20 859 1004 2.9E-22 T 14-10-2018 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 717 3.3E-22 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 SMART SM00926 72 154 3.0E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 SUPERFAMILY SSF53706 70 897 7.13E-116 T 14-10-2018 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Gene3D G3DSA:3.40.50.740 566 708 4.1E-11 T 14-10-2018 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Gene3D G3DSA:2.20.25.90 68 114 3.3E-5 T 14-10-2018 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 4.9E-10 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_10480 d014bfaa99b2f42050a5a6a535c4501d 1030 SUPERFAMILY SSF50692 881 1003 1.76E-21 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_24096 8d58dd6755b46428bbb4880c6438174a 482 Gene3D G3DSA:3.40.720.10 10 360 2.0E-79 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_24096 8d58dd6755b46428bbb4880c6438174a 482 Pfam PF00884 Sulfatase 19 339 1.4E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_24096 8d58dd6755b46428bbb4880c6438174a 482 Gene3D G3DSA:3.30.1120.10 386 467 4.8E-13 T 14-10-2018 VEJY3_24096 8d58dd6755b46428bbb4880c6438174a 482 SUPERFAMILY SSF53649 16 457 8.11E-79 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 Gene3D G3DSA:3.20.20.80 9 379 8.3E-77 T 14-10-2018 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 PRINTS PR00110 Alpha-amylase signature 88 99 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 PRINTS PR00110 Alpha-amylase signature 230 248 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 PRINTS PR00110 Alpha-amylase signature 55 72 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 PRINTS PR00110 Alpha-amylase signature 296 308 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 PRINTS PR00110 Alpha-amylase signature 201 212 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 SUPERFAMILY SSF51445 12 343 7.51E-60 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 SMART SM00642 13 374 2.2E-22 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_22261 31a3031637fb82d9c0f2bb79b3eb40b2 450 Pfam PF00128 Alpha amylase, catalytic domain 33 232 8.2E-15 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_09270 35af87908c0cf03886b64c017f6e2239 417 Gene3D G3DSA:3.40.190.10 134 374 5.0E-65 T 14-10-2018 VEJY3_09270 35af87908c0cf03886b64c017f6e2239 417 Pfam PF01547 Bacterial extracellular solute-binding protein 43 331 1.3E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_09270 35af87908c0cf03886b64c017f6e2239 417 Gene3D G3DSA:3.40.190.10 47 352 5.0E-65 T 14-10-2018 VEJY3_09270 35af87908c0cf03886b64c017f6e2239 417 SUPERFAMILY SSF53850 13 395 2.69E-60 T 14-10-2018 VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 Gene3D G3DSA:3.30.428.10 46 177 3.5E-55 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 SUPERFAMILY SSF54197 6 179 3.16E-72 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 8.1E-67 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 SUPERFAMILY SSF54197 181 348 8.51E-55 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 9.1E-66 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 PIRSF PIRSF000808 2 345 2.4E-125 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_22626 8a138e0b15522f2b84e9807aeec1d1dc 350 Gene3D G3DSA:3.30.428.10 178 350 3.1E-73 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_17401 f6a44ebc34bb1e9d0dc4e0e0d3d35a66 101 SMART SM01065 12 93 0.0016 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 VEJY3_17401 f6a44ebc34bb1e9d0dc4e0e0d3d35a66 101 SUPERFAMILY SSF81296 11 95 1.17E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_17401 f6a44ebc34bb1e9d0dc4e0e0d3d35a66 101 Gene3D G3DSA:2.60.40.10 6 100 5.7E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_17401 f6a44ebc34bb1e9d0dc4e0e0d3d35a66 101 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 17 96 3.9E-6 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 2.0E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 SUPERFAMILY SSF47413 1 58 2.91E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 Pfam PF13407 Periplasmic binding protein domain 64 258 3.4E-13 T 14-10-2018 IPR025997 Periplasmic binding protein VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 Gene3D G3DSA:1.10.260.40 1 61 3.9E-26 T 14-10-2018 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 SMART SM00354 1 73 1.6E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 Gene3D G3DSA:3.40.50.2300 155 326 1.6E-25 T 14-10-2018 VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 SUPERFAMILY SSF53822 61 313 1.61E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_20156 9c2c6a3ece10480aeaea5f1b3ddf5819 326 Gene3D G3DSA:3.40.50.2300 62 154 9.2E-21 T 14-10-2018 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 Pfam PF02222 ATP-grasp domain 101 274 6.2E-51 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 Gene3D G3DSA:3.40.50.20 1 79 3.6E-18 T 14-10-2018 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 Gene3D G3DSA:3.30.470.20 163 375 6.4E-72 T 14-10-2018 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.756 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 SUPERFAMILY SSF51246 299 371 6.36E-19 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 SUPERFAMILY SSF56059 92 295 2.47E-55 T 14-10-2018 VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 SUPERFAMILY SSF52440 1 88 1.41E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_15295 0d4c85ba083ea810984d650577d955fb 377 Gene3D G3DSA:3.30.1490.20 102 162 2.2E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_11405 277864f265e5381afc4680355baaa302 256 Pfam PF04333 MlaA lipoprotein 40 231 4.9E-62 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEJY3_11405 277864f265e5381afc4680355baaa302 256 PRINTS PR01805 VacJ lipoprotein signature 59 75 3.1E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEJY3_11405 277864f265e5381afc4680355baaa302 256 PRINTS PR01805 VacJ lipoprotein signature 110 127 3.1E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEJY3_11405 277864f265e5381afc4680355baaa302 256 PRINTS PR01805 VacJ lipoprotein signature 147 164 3.1E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEJY3_11405 277864f265e5381afc4680355baaa302 256 PRINTS PR01805 VacJ lipoprotein signature 41 54 3.1E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEJY3_22076 1f0cd623c900fbf3173bc0f3e1c373a1 109 SMART SM00530 9 64 1.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_22076 1f0cd623c900fbf3173bc0f3e1c373a1 109 SUPERFAMILY SSF47413 5 61 1.35E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_22076 1f0cd623c900fbf3173bc0f3e1c373a1 109 Pfam PF01381 Helix-turn-helix 12 55 1.6E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_22076 1f0cd623c900fbf3173bc0f3e1c373a1 109 Gene3D G3DSA:1.10.260.40 5 70 6.0E-10 T 14-10-2018 VEJY3_10100 4da2c6681caf8e76fc30f3920c1b8f2b 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 5.0E-110 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VEJY3_10100 4da2c6681caf8e76fc30f3920c1b8f2b 360 PIRSF PIRSF028101 4 360 9.6E-161 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VEJY3_10100 4da2c6681caf8e76fc30f3920c1b8f2b 360 SUPERFAMILY SSF50969 61 314 5.1E-11 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Gene3D G3DSA:2.40.50.140 130 188 1.1E-27 T 14-10-2018 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 SUPERFAMILY SSF50249 70 128 9.42E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.946 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 SMART SM00841 131 186 7.1E-32 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 SMART SM01185 69 123 9.4E-26 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.3E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 SUPERFAMILY SSF50249 130 187 2.74E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.2E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Gene3D G3DSA:2.40.50.140 66 129 2.1E-29 T 14-10-2018 VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VEJY3_14485 cf57363e766faf60d24243d5bd1e1b7b 188 PIRSF PIRSF005901 2 188 7.2E-64 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VEJY3_00795 84231ae5d14ce76d6865360de7cbd062 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 2.0E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_00795 84231ae5d14ce76d6865360de7cbd062 347 SUPERFAMILY SSF161098 139 325 9.94E-20 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00795 84231ae5d14ce76d6865360de7cbd062 347 Gene3D G3DSA:1.10.3720.10 133 339 2.1E-18 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 SUPERFAMILY SSF53092 3 159 1.57E-38 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 Gene3D G3DSA:3.40.350.10 2 159 1.2E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 Pfam PF00557 Metallopeptidase family M24 170 377 1.6E-31 T 14-10-2018 IPR000994 Peptidase M24 VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 SUPERFAMILY SSF55920 161 393 9.42E-52 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 161 1.1E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VEJY3_17226 c48aa4502d9ec379e1d7edba91d01f06 395 Gene3D G3DSA:3.90.230.10 160 393 9.6E-40 T 14-10-2018 VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 SUPERFAMILY SSF55031 180 297 1.96E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 Gene3D G3DSA:3.40.630.10 12 371 7.0E-133 T 14-10-2018 VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 Pfam PF07687 Peptidase dimerisation domain 184 275 3.5E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 Pfam PF01546 Peptidase family M20/M25/M40 69 383 1.2E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 Gene3D G3DSA:3.30.70.360 179 293 7.0E-133 T 14-10-2018 VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 SUPERFAMILY SSF53187 2 386 3.43E-85 T 14-10-2018 VEJY3_20951 7070bd4f30ab19ac315767553eb37fef 393 PIRSF PIRSF005962 1 390 7.9E-129 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 Gene3D G3DSA:3.90.226.10 25 285 6.2E-81 T 14-10-2018 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 SUPERFAMILY SSF52096 25 282 2.49E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 Pfam PF01039 Carboxyl transferase domain 100 239 5.2E-13 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11275 4948093f44fcf30233f47d3043ad28bb 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.221 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_23011 a71f33149bfb405f7965f629dd654af3 343 SUPERFAMILY SSF46689 289 336 1.57E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_23011 a71f33149bfb405f7965f629dd654af3 343 Gene3D G3DSA:1.10.10.60 231 339 1.1E-18 T 14-10-2018 VEJY3_23011 a71f33149bfb405f7965f629dd654af3 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 209 1.7E-36 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VEJY3_23011 a71f33149bfb405f7965f629dd654af3 343 Pfam PF12833 Helix-turn-helix domain 257 334 2.1E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_23011 a71f33149bfb405f7965f629dd654af3 343 SMART SM00342 251 333 2.1E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_02950 b932491941565938e355ca05e47f9c81 226 Pfam PF07730 Histidine kinase 27 87 2.2E-10 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEJY3_02950 b932491941565938e355ca05e47f9c81 226 Gene3D G3DSA:3.30.565.10 88 225 8.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02950 b932491941565938e355ca05e47f9c81 226 SMART SM00387 128 226 9.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02950 b932491941565938e355ca05e47f9c81 226 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 133 223 3.7E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02950 b932491941565938e355ca05e47f9c81 226 SUPERFAMILY SSF55874 106 223 1.83E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 Gene3D G3DSA:3.30.428.10 1 111 1.5E-36 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 PRINTS PR00332 Histidine triad family signature 27 45 2.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 PRINTS PR00332 Histidine triad family signature 95 105 2.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 PRINTS PR00332 Histidine triad family signature 6 22 2.1E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 Pfam PF01230 HIT domain 12 109 1.5E-30 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site VEJY3_04465 124d53e5331f37839f4080ec69048edb 116 SUPERFAMILY SSF54197 1 112 1.86E-35 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_03785 509a34e12cc4c060b9154cf5ddf9295a 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.6E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VEJY3_03785 509a34e12cc4c060b9154cf5ddf9295a 149 Gene3D G3DSA:3.30.1490.190 85 141 5.4E-23 T 14-10-2018 VEJY3_03785 509a34e12cc4c060b9154cf5ddf9295a 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03785 509a34e12cc4c060b9154cf5ddf9295a 149 SUPERFAMILY SSF46785 5 135 1.36E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_08260 075953d0b76015158594173fdea41e25 423 Gene3D G3DSA:3.90.1150.10 4 416 5.3E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_08260 075953d0b76015158594173fdea41e25 423 SUPERFAMILY SSF53383 18 419 1.01E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_08260 075953d0b76015158594173fdea41e25 423 PIRSF PIRSF000521 1 128 6.7E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_08260 075953d0b76015158594173fdea41e25 423 PIRSF PIRSF000521 122 422 4.8E-43 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_08260 075953d0b76015158594173fdea41e25 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_08260 075953d0b76015158594173fdea41e25 423 Gene3D G3DSA:3.40.640.10 58 317 5.3E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_08260 075953d0b76015158594173fdea41e25 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 419 1.5E-177 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VEJY3_08260 075953d0b76015158594173fdea41e25 423 Pfam PF00202 Aminotransferase class-III 23 419 2.8E-129 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 Pfam PF00437 Type II/IV secretion system protein 189 453 4.5E-78 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 Gene3D G3DSA:3.30.300.160 63 145 2.2E-6 T 14-10-2018 VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 Gene3D G3DSA:3.40.50.300 291 565 7.2E-102 T 14-10-2018 VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 Gene3D G3DSA:3.30.450.90 147 286 7.3E-44 T 14-10-2018 VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.7E-22 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 SUPERFAMILY SSF52540 181 559 6.48E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 SUPERFAMILY SSF160246 3 145 6.02E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEJY3_13845 997b921978cf2d36fdfcb02fecf027a4 574 SMART SM00382 314 435 0.0025 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_03530 74df425ff1c888240ad59d6941e1af9c 198 SMART SM00858 76 138 2.4E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEJY3_03530 74df425ff1c888240ad59d6941e1af9c 198 Gene3D G3DSA:2.30.30.760 138 198 5.4E-13 T 14-10-2018 VEJY3_03530 74df425ff1c888240ad59d6941e1af9c 198 Pfam PF13144 Chaperone for flagella basal body P-ring formation 5 196 8.4E-53 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:3.40.50.20 554 662 2.4E-49 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SMART SM00851 955 1041 1.3E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF48108 397 554 5.36E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.3E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF56059 128 401 1.43E-108 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.371 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:3.40.50.1380 937 1072 4.5E-33 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF56059 673 932 4.42E-103 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF52335 937 1071 2.75E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF52440 1 127 1.87E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.2E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.4E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.112 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:3.40.50.20 1 116 1.1E-50 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:1.10.1030.10 404 553 1.0E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:3.30.470.20 665 934 5.4E-124 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Gene3D G3DSA:3.30.470.20 119 403 2.9E-129 T 14-10-2018 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 SMART SM01096 424 547 3.5E-75 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02135 e64cc08237782f2e0db17287e8508b57 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Gene3D G3DSA:1.10.287.110 1 117 1.9E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 SUPERFAMILY SSF49493 263 348 7.98E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 SUPERFAMILY SSF49493 118 260 4.32E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 42.942 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Pfam PF00226 DnaJ domain 5 67 4.8E-27 T 14-10-2018 IPR001623 DnaJ domain VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Gene3D G3DSA:2.60.260.20 260 367 9.2E-29 T 14-10-2018 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 SUPERFAMILY SSF46565 1 115 2.62E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Pfam PF00684 DnaJ central domain 151 211 3.5E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Pfam PF01556 DnaJ C terminal domain 125 337 1.5E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 SUPERFAMILY SSF57938 138 214 1.7E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 Gene3D G3DSA:2.10.230.10 143 213 1.2E-25 T 14-10-2018 VEJY3_03005 b2353e0a7afa7b1492e6da21bf3f41dc 383 SMART SM00271 4 62 2.7E-31 T 14-10-2018 IPR001623 DnaJ domain VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 SMART SM00877 4 80 8.2E-38 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 65 4.0E-22 T 14-10-2018 VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 Gene3D G3DSA:3.30.70.1710 1 93 5.3E-43 T 14-10-2018 VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 SUPERFAMILY SSF143414 4 91 4.58E-33 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08450 92e0d5ecedd3c423bd9c6ecbf19f3423 93 Pfam PF00936 BMC domain 5 80 1.0E-29 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 Gene3D G3DSA:3.20.20.70 138 284 3.0E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 3.4E-58 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 PIRSF PIRSF006250 16 295 5.1E-101 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 Gene3D G3DSA:3.90.1170.20 21 293 3.0E-126 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 SUPERFAMILY SSF54675 15 128 1.22E-33 T 14-10-2018 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 SUPERFAMILY SSF51690 130 294 9.03E-60 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEJY3_13020 36c2449851f5a297a89a5521baf8802c 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 4.6E-27 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Gene3D G3DSA:1.10.238.260 280 393 2.2E-32 T 14-10-2018 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 SUPERFAMILY SSF51569 1 291 2.01E-101 T 14-10-2018 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 SMART SM00917 369 499 1.3E-27 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 SUPERFAMILY SSF110921 393 498 6.67E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.453 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Gene3D G3DSA:3.20.20.70 1 277 6.9E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 5.2E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Gene3D G3DSA:3.30.160.270 394 500 6.3E-7 T 14-10-2018 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_01690 483c28d903344158c2cb30b7b385a812 515 Pfam PF00682 HMGL-like 4 273 5.1E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_24186 d03f8e3ba403b86e70bbfb0a71826e28 343 SUPERFAMILY SSF53850 33 242 1.28E-45 T 14-10-2018 VEJY3_24186 d03f8e3ba403b86e70bbfb0a71826e28 343 Gene3D G3DSA:3.40.190.10 30 119 2.5E-7 T 14-10-2018 VEJY3_24186 d03f8e3ba403b86e70bbfb0a71826e28 343 SMART SM00062 34 257 4.0E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_24186 d03f8e3ba403b86e70bbfb0a71826e28 343 Pfam PF09084 NMT1/THI5 like 57 241 9.9E-20 T 14-10-2018 IPR015168 SsuA/THI5-like VEJY3_24186 d03f8e3ba403b86e70bbfb0a71826e28 343 Gene3D G3DSA:3.40.190.10 120 211 1.8E-26 T 14-10-2018 VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 SUPERFAMILY SSF103473 11 424 1.7E-28 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 Pfam PF01553 Acyltransferase 442 567 7.3E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 SUPERFAMILY SSF69593 400 606 4.05E-28 T 14-10-2018 VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 Pfam PF07690 Major Facilitator Superfamily 20 316 2.9E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 Gene3D G3DSA:1.20.1250.20 10 422 9.6E-28 T 14-10-2018 VEJY3_04300 49e0d1a51f9e9705531b1fd7eeaf00c1 624 SMART SM00563 456 570 1.6E-34 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 PIRSF PIRSF000197 3 1047 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Gene3D G3DSA:3.40.605.10 549 1035 1.5E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 SUPERFAMILY SSF51730 190 532 6.67E-115 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 SUPERFAMILY SSF53720 551 1035 1.57E-126 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Gene3D G3DSA:3.40.309.10 813 1005 1.5E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 9.0E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Pfam PF00171 Aldehyde dehydrogenase family 583 1034 5.7E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Gene3D G3DSA:3.20.20.220 151 525 2.7E-129 T 14-10-2018 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1034 2.8E-243 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 Pfam PF01619 Proline dehydrogenase 197 490 9.2E-94 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VEJY3_24291 9972f50e3642a31c30d2183975c02251 1048 SUPERFAMILY SSF81935 17 188 1.57E-63 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 SUPERFAMILY SSF103025 614 902 7.53E-93 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 1.7E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 373 389 1.7E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 1.7E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 207 222 1.7E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 620 885 1.6E-72 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PIRSF PIRSF037980 1 1005 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:3.30.70.1400 673 898 5.8E-90 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 SUPERFAMILY SSF51905 161 485 1.94E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 894 991 1.9E-12 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:3.30.1360.120 616 874 5.8E-90 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 6.2E-23 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 429 6.5E-14 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.7E-7 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.7E-7 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 SUPERFAMILY SSF101790 907 1003 3.92E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:1.10.10.1100 511 588 4.7E-85 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:3.50.50.60 172 593 4.7E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:2.40.30.110 910 991 7.6E-7 T 14-10-2018 VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:3.50.50.60 295 423 4.7E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21526 7af80c0147eeeefcb2fe8c1113b2465b 1005 Gene3D G3DSA:3.10.20.440 9 106 8.5E-7 T 14-10-2018 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 Gene3D G3DSA:3.65.10.10 22 229 2.4E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.599 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.2E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 Gene3D G3DSA:3.65.10.10 12 414 2.4E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 SUPERFAMILY SSF55205 6 418 5.72E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VEJY3_13635 6dc8cd70e8e8c179b803e36b74284d2a 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 5.5E-183 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 Gene3D G3DSA:3.30.1130.10 143 281 3.7E-63 T 14-10-2018 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.376 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.3E-48 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 Pfam PF14489 QueF-like protein 194 270 3.4E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 PIRSF PIRSF004750 6 281 1.3E-130 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 SUPERFAMILY SSF55620 184 267 1.63E-9 T 14-10-2018 VEJY3_03230 a1f9bd52d5bc8be0b842af1adbcd0563 281 Gene3D G3DSA:3.30.1130.10 21 138 3.0E-45 T 14-10-2018 VEJY3_03140 1af36c873400f2adf76d64aab69dd564 156 Gene3D G3DSA:3.40.50.960 1 156 9.4E-64 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03140 1af36c873400f2adf76d64aab69dd564 156 SUPERFAMILY SSF52121 4 154 1.31E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03140 1af36c873400f2adf76d64aab69dd564 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 7.3E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03140 1af36c873400f2adf76d64aab69dd564 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.08 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 SUPERFAMILY SSF54909 63 149 7.87E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 SMART SM00344 1 110 5.1E-44 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 SUPERFAMILY SSF46785 1 60 7.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.5E-19 T 14-10-2018 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 Gene3D G3DSA:1.10.10.10 1 52 8.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 Gene3D G3DSA:3.30.70.920 53 146 9.3E-24 T 14-10-2018 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.6E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17566 a23aba9c9b7ee487606ef57026433e2b 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 9.4E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_21396 9c2457b047a2bbab9676408ff0aecac9 238 Pfam PF02627 Carboxymuconolactone decarboxylase family 149 233 5.6E-9 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_21396 9c2457b047a2bbab9676408ff0aecac9 238 Pfam PF02627 Carboxymuconolactone decarboxylase family 21 95 8.1E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_21396 9c2457b047a2bbab9676408ff0aecac9 238 SUPERFAMILY SSF69118 24 237 3.04E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_21396 9c2457b047a2bbab9676408ff0aecac9 238 Gene3D G3DSA:1.20.1290.10 12 238 3.8E-53 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.695 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 SUPERFAMILY SSF100879 245 353 1.96E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Gene3D G3DSA:3.30.70.270 73 173 6.6E-38 T 14-10-2018 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Pfam PF11798 IMS family HHH motif 170 200 1.2E-5 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Gene3D G3DSA:1.10.150.20 174 232 7.9E-15 T 14-10-2018 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Gene3D G3DSA:2.30.40.20 15 72 6.2E-27 T 14-10-2018 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 2.4E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Gene3D G3DSA:3.30.1490.100 241 353 3.7E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 SUPERFAMILY SSF56672 4 238 6.4E-92 T 14-10-2018 VEJY3_12190 3239c5d422dc4654b9575d1d6d348dc5 354 Pfam PF00817 impB/mucB/samB family 11 158 6.6E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEJY3_04500 7614c7c899146163d48b24d58ce0cefc 182 SUPERFAMILY SSF55729 3 177 4.95E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_04500 7614c7c899146163d48b24d58ce0cefc 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 1.7E-24 T 14-10-2018 IPR000182 GNAT domain VEJY3_04500 7614c7c899146163d48b24d58ce0cefc 182 Gene3D G3DSA:3.40.630.30 1 178 4.7E-47 T 14-10-2018 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 Gene3D G3DSA:3.60.120.10 4 453 2.3E-166 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 SUPERFAMILY SSF56322 8 452 1.96E-139 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 153 1.5E-24 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_09970 870bebd316da906fa9b02462f1518946 453 Pfam PF00425 chorismate binding enzyme 191 444 7.6E-96 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEJY3_03405 1187cb1722b0675bb2578d1d2df095af 212 Gene3D G3DSA:2.50.20.10 33 211 6.7E-49 T 14-10-2018 VEJY3_03405 1187cb1722b0675bb2578d1d2df095af 212 SUPERFAMILY SSF89392 27 210 4.32E-47 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEJY3_03405 1187cb1722b0675bb2578d1d2df095af 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.009 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VEJY3_03405 1187cb1722b0675bb2578d1d2df095af 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 1.4E-41 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VEJY3_01660 53ffd2c23229fb65b04103503f9e8ae2 781 Pfam PF03968 OstA-like protein 58 189 1.8E-16 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VEJY3_01660 53ffd2c23229fb65b04103503f9e8ae2 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.057 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VEJY3_01660 53ffd2c23229fb65b04103503f9e8ae2 781 Gene3D G3DSA:2.60.450.10 49 98 1.9E-6 T 14-10-2018 VEJY3_01660 53ffd2c23229fb65b04103503f9e8ae2 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.1E-111 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 Gene3D G3DSA:3.20.20.80 4 464 9.5E-152 T 14-10-2018 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 358 366 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 SUPERFAMILY SSF51445 2 457 9.37E-160 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 390 8.6E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 8.6E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 425 437 8.6E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 358 366 8.6E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 400 417 8.6E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_04365 f3652c93061e29b6d01935faeac6141c 468 Pfam PF00232 Glycosyl hydrolase family 1 3 460 4.4E-157 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_05775 b40598b841ec6ed4e3eff48a3acbce33 310 Gene3D G3DSA:3.40.50.150 82 305 7.7E-47 T 14-10-2018 VEJY3_05775 b40598b841ec6ed4e3eff48a3acbce33 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.9E-175 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEJY3_05775 b40598b841ec6ed4e3eff48a3acbce33 310 SUPERFAMILY SSF53335 6 287 4.07E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 SMART SM00448 8 119 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 8.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 8.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 8.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 SUPERFAMILY SSF52172 8 121 9.82E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 Gene3D G3DSA:3.40.50.2300 2 130 2.9E-36 T 14-10-2018 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 Gene3D G3DSA:1.10.10.10 135 197 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 SMART SM00421 139 196 3.6E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 5.6E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 Pfam PF00072 Response regulator receiver domain 10 119 3.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 SUPERFAMILY SSF46894 133 197 9.86E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_10460 1ee168845dcf09a0e279e366936365d8 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 Gene3D G3DSA:3.40.50.720 3 274 1.4E-141 T 14-10-2018 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 7.7E-6 T 14-10-2018 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 7.7E-6 T 14-10-2018 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 7.7E-6 T 14-10-2018 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 Gene3D G3DSA:3.90.25.10 194 329 1.4E-141 T 14-10-2018 VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 SUPERFAMILY SSF51735 2 335 5.56E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_09475 1079f5f333d317c7e3210cd75c106f1e 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.7E-56 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 SUPERFAMILY SSF53613 12 302 2.03E-58 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 Gene3D G3DSA:3.40.1190.20 6 310 2.0E-111 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 Gene3D G3DSA:3.40.50.620 321 474 3.6E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 2.9E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 14-10-2018 VEJY3_01915 37a2e74a45f1f6559edc8e214f465bf4 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.726 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 Pfam PF07729 FCD domain 94 223 1.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 SMART SM00345 13 72 2.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 Gene3D G3DSA:1.10.10.10 7 75 8.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 Gene3D G3DSA:1.20.120.530 93 240 7.2E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 SMART SM00895 94 224 1.9E-17 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 SUPERFAMILY SSF46785 4 76 1.11E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 SUPERFAMILY SSF48008 93 232 1.23E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_09245 6c95fef36d4857646047bf955b5249b6 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22181 0fab763ed1c03be6b63c51cb6b1af4fb 141 SUPERFAMILY SSF52402 3 139 1.93E-24 T 14-10-2018 VEJY3_22181 0fab763ed1c03be6b63c51cb6b1af4fb 141 Gene3D G3DSA:3.40.50.620 2 141 3.6E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_22181 0fab763ed1c03be6b63c51cb6b1af4fb 141 Pfam PF00582 Universal stress protein family 3 138 9.3E-14 T 14-10-2018 IPR006016 UspA VEJY3_22181 0fab763ed1c03be6b63c51cb6b1af4fb 141 PIRSF PIRSF006276 1 141 5.0E-43 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_08155 ce9df6b3831a923a74a6145e9cc3865d 337 Pfam PF00246 Zinc carboxypeptidase 10 249 2.5E-22 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_08155 ce9df6b3831a923a74a6145e9cc3865d 337 SMART SM00631 4 264 0.0015 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_08155 ce9df6b3831a923a74a6145e9cc3865d 337 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 53 75 - T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_08155 ce9df6b3831a923a74a6145e9cc3865d 337 SUPERFAMILY SSF53187 9 310 1.42E-49 T 14-10-2018 VEJY3_08155 ce9df6b3831a923a74a6145e9cc3865d 337 Gene3D G3DSA:3.40.630.10 8 286 2.2E-40 T 14-10-2018 VEJY3_19771 a42e73be2ccedcf8550cb753898beb1d 93 Pfam PF10115 Transcriptional activator HlyU 2 92 9.7E-40 T 14-10-2018 IPR018772 Transcription activator HlyU VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 SUPERFAMILY SSF52833 3 81 2.81E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 Pfam PF00462 Glutaredoxin 3 69 6.3E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 Gene3D G3DSA:3.40.30.10 1 84 3.8E-25 T 14-10-2018 VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 PRINTS PR00160 Glutaredoxin signature 3 21 3.3E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 PRINTS PR00160 Glutaredoxin signature 66 79 3.3E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_05960 a266915fe862a1c1e63ff353f019fdd6 89 PRINTS PR00160 Glutaredoxin signature 52 65 3.3E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_13200 b23eb91610ace2820877e65870358eba 159 Gene3D G3DSA:3.30.1330.50 1 159 2.4E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEJY3_13200 b23eb91610ace2820877e65870358eba 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.763 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEJY3_13200 b23eb91610ace2820877e65870358eba 159 SUPERFAMILY SSF69765 1 157 2.75E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEJY3_13200 b23eb91610ace2820877e65870358eba 159 Pfam PF02542 YgbB family 2 155 2.7E-65 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEJY3_13200 b23eb91610ace2820877e65870358eba 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEJY3_22516 fc48513bdf576a063f5332446448abed 119 SUPERFAMILY SSF54593 3 118 1.23E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_22516 fc48513bdf576a063f5332446448abed 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 115 8.3E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_22516 fc48513bdf576a063f5332446448abed 119 Gene3D G3DSA:3.10.180.10 1 119 3.3E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_22516 fc48513bdf576a063f5332446448abed 119 PIRSF PIRSF039020 1 119 1.3E-35 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 2.8E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 2.2E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1100.10 442 613 3.1E-65 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:2.40.270.10 1035 1241 2.8E-88 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1110.10 157 267 1.1E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 2.2E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 5.0E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1800.10 1251 1303 8.5E-11 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.292 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:2.40.50.100 714 788 3.4E-32 T 14-10-2018 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 6.8E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14765 19f0bce26caf206c7c8c926815895bb1 1342 Gene3D G3DSA:3.90.1110.10 300 441 6.8E-35 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 SUPERFAMILY SSF46689 227 277 3.23E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 SMART SM00342 191 274 4.9E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 Pfam PF02311 AraC-like ligand binding domain 33 115 4.8E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 Gene3D G3DSA:2.60.120.280 30 138 2.8E-9 T 14-10-2018 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 SUPERFAMILY SSF46689 176 225 1.76E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 Pfam PF12833 Helix-turn-helix domain 197 275 6.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 SUPERFAMILY SSF51215 29 162 1.02E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_19711 6257dcb4c27027d8bbcf7fb16ff39a94 284 Gene3D G3DSA:1.10.10.60 171 279 1.9E-26 T 14-10-2018 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Pfam PF02080 TrkA-C domain 417 484 9.1E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 SUPERFAMILY SSF116726 414 481 1.31E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 6.9E-57 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 SUPERFAMILY SSF56176 499 570 2.97E-6 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.946 T 14-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Gene3D G3DSA:3.30.70.1450 409 483 8.0E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Pfam PF03471 Transporter associated domain 497 570 4.4E-6 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 Gene3D G3DSA:1.20.1530.20 7 392 5.3E-22 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_14575 0eaa08e04407d7ac4e54ed30a98c65c6 580 SMART SM01091 493 572 4.1E-8 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Gene3D G3DSA:1.10.287.130 348 435 5.7E-20 T 14-10-2018 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Pfam PF02743 Cache domain 37 215 4.2E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Gene3D G3DSA:3.30.450.20 57 173 3.0E-40 T 14-10-2018 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 SMART SM00387 483 593 4.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 SUPERFAMILY SSF103190 48 187 2.55E-29 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 PIRSF PIRSF036431 1 600 4.7E-192 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 6.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 SMART SM00388 372 440 1.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 SUPERFAMILY SSF55874 438 593 1.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 1.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Gene3D G3DSA:3.30.450.20 174 283 1.4E-27 T 14-10-2018 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Gene3D G3DSA:3.30.450.20 27 56 2.1E-6 T 14-10-2018 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Gene3D G3DSA:3.30.565.10 441 599 4.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 SUPERFAMILY SSF47384 367 440 2.16E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_04190 b90309af4f961f43e3096b67f202d8ca 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 591 1.6E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_13185 c4dc3cb69ba1131e134eea6c9ec3341a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.8E-71 T 14-10-2018 VEJY3_13185 c4dc3cb69ba1131e134eea6c9ec3341a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VEJY3_13185 c4dc3cb69ba1131e134eea6c9ec3341a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.034 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VEJY3_13185 c4dc3cb69ba1131e134eea6c9ec3341a 208 Gene3D G3DSA:3.40.50.150 2 206 2.4E-77 T 14-10-2018 VEJY3_13185 c4dc3cb69ba1131e134eea6c9ec3341a 208 SUPERFAMILY SSF53335 12 204 2.15E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00655 d82208830529199ac2efebe579100ec4 164 SUPERFAMILY SSF103054 86 163 9.81E-25 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VEJY3_00655 d82208830529199ac2efebe579100ec4 164 PIRSF PIRSF006291 3 163 6.8E-41 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEJY3_00655 d82208830529199ac2efebe579100ec4 164 Gene3D G3DSA:3.30.1360.100 86 164 3.8E-31 T 14-10-2018 VEJY3_00655 d82208830529199ac2efebe579100ec4 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 2.2E-55 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 2.8E-8 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 SUPERFAMILY SSF54211 564 756 2.62E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Gene3D G3DSA:3.40.50.300 217 449 3.4E-55 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Gene3D G3DSA:3.40.50.300 5 178 1.8E-27 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 SUPERFAMILY SSF52540 30 545 2.34E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Pfam PF13654 AAA domain 25 539 5.7E-185 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 2.7E-6 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.7E-6 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.7E-6 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Gene3D G3DSA:1.10.8.60 450 537 2.2E-13 T 14-10-2018 VEJY3_23446 efbc4b29c2789515db1c6b5d885db103 786 Gene3D G3DSA:3.30.230.10 542 768 4.9E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Gene3D G3DSA:2.40.30.10 1 100 6.9E-27 T 14-10-2018 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 SUPERFAMILY SSF52343 96 221 2.88E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 SUPERFAMILY SSF63380 3 99 1.09E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Pfam PF00175 Oxidoreductase NAD-binding domain 113 200 4.2E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 35 45 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 112 131 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 SUPERFAMILY SSF54292 211 315 1.89E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Gene3D G3DSA:3.10.20.30 219 315 3.7E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 188 196 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 112 131 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 137 146 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 5.4E-31 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Gene3D G3DSA:3.40.50.80 101 218 2.6E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 235 306 1.6E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 Pfam PF00970 Oxidoreductase FAD-binding domain 7 98 1.2E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_06970 5c9b6ef6a013393e5e01b8e093602cc2 315 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 264 272 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_08075 119f278cd71c8de5578242ee70347b99 219 SUPERFAMILY SSF55469 5 216 2.22E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_08075 119f278cd71c8de5578242ee70347b99 219 Gene3D G3DSA:3.40.109.10 1 217 6.3E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_08075 119f278cd71c8de5578242ee70347b99 219 Pfam PF00881 Nitroreductase family 10 194 3.9E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEJY3_00270 717fae32a936f036842cd7020690a72b 279 SUPERFAMILY SSF53335 9 273 8.49E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00270 717fae32a936f036842cd7020690a72b 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.2E-116 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VEJY3_00270 717fae32a936f036842cd7020690a72b 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.514 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VEJY3_00270 717fae32a936f036842cd7020690a72b 279 Gene3D G3DSA:3.40.50.150 1 279 1.7E-115 T 14-10-2018 VEJY3_22951 a731906a52746be30fe67cacebbbf725 461 Gene3D G3DSA:3.40.50.300 1 177 3.8E-12 T 14-10-2018 VEJY3_22951 a731906a52746be30fe67cacebbbf725 461 SUPERFAMILY SSF52540 20 356 3.6E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22951 a731906a52746be30fe67cacebbbf725 461 Pfam PF04851 Type III restriction enzyme, res subunit 2 77 4.6E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_22951 a731906a52746be30fe67cacebbbf725 461 Gene3D G3DSA:3.40.50.300 181 381 3.0E-24 T 14-10-2018 VEJY3_22951 a731906a52746be30fe67cacebbbf725 461 Pfam PF00271 Helicase conserved C-terminal domain 259 354 4.7E-6 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_15871 2f1ed3c5a37d37b159daa59be5befcf0 123 SMART SM00345 14 73 2.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_15871 2f1ed3c5a37d37b159daa59be5befcf0 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_15871 2f1ed3c5a37d37b159daa59be5befcf0 123 SUPERFAMILY SSF46785 1 82 5.6E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_15871 2f1ed3c5a37d37b159daa59be5befcf0 123 Gene3D G3DSA:1.10.10.10 7 121 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 SMART SM00981 75 165 1.6E-24 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 SUPERFAMILY SSF52402 174 372 7.94E-42 T 14-10-2018 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Gene3D G3DSA:3.30.2130.30 1 174 3.3E-32 T 14-10-2018 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Pfam PF02926 THUMP domain 50 158 1.5E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 SUPERFAMILY SSF52821 402 481 1.83E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Gene3D G3DSA:3.40.50.620 175 399 4.8E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.372 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Gene3D G3DSA:3.40.250.10 400 482 9.5E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.3E-72 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VEJY3_03185 a936774dac1b63ba0f467e70363bbb34 482 SUPERFAMILY SSF143437 1 173 2.79E-47 T 14-10-2018 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 SMART SM00853 493 636 5.0E-21 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Gene3D G3DSA:3.30.230.10 217 329 1.6E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Gene3D G3DSA:2.30.42.20 490 672 1.5E-55 T 14-10-2018 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 SUPERFAMILY SSF118116 490 673 2.22E-39 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 9.1E-40 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 SMART SM01340 212 330 2.0E-58 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 674 25.477 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 SUPERFAMILY SSF55874 1 207 4.85E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.8E-11 T 14-10-2018 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Gene3D G3DSA:3.30.1370.100 534 628 1.5E-55 T 14-10-2018 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Pfam PF08676 MutL C terminal dimerisation domain 490 628 6.5E-32 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 Gene3D G3DSA:3.30.565.10 1 216 6.7E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14365 b468e0fdade5ab8a6f8319047cd9cc37 676 SUPERFAMILY SSF54211 191 329 5.69E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_15490 97b298853d076ac9d09c9fb19ad2afe2 293 Pfam PF02195 ParB-like nuclease domain 42 130 8.5E-30 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VEJY3_15490 97b298853d076ac9d09c9fb19ad2afe2 293 SUPERFAMILY SSF110849 41 174 1.2E-33 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEJY3_15490 97b298853d076ac9d09c9fb19ad2afe2 293 Gene3D G3DSA:1.10.10.2830 117 230 1.0E-33 T 14-10-2018 VEJY3_15490 97b298853d076ac9d09c9fb19ad2afe2 293 SMART SM00470 40 130 6.5E-37 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VEJY3_15490 97b298853d076ac9d09c9fb19ad2afe2 293 Gene3D G3DSA:3.90.1530.30 53 116 2.7E-27 T 14-10-2018 VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 SMART SM00382 34 231 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 Gene3D G3DSA:3.40.50.300 3 326 5.9E-91 T 14-10-2018 VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 SUPERFAMILY SSF52540 5 252 2.08E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12830 ec821c5afdcf20da8a7de4344dbac31d 327 Pfam PF00005 ABC transporter 26 181 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18856 4fdd2769574d8d83abfe5af5ca624e6d 86 Pfam PF00037 4Fe-4S binding domain 7 25 1.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_18856 4fdd2769574d8d83abfe5af5ca624e6d 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_18856 4fdd2769574d8d83abfe5af5ca624e6d 86 SUPERFAMILY SSF54862 6 63 9.52E-14 T 14-10-2018 VEJY3_18856 4fdd2769574d8d83abfe5af5ca624e6d 86 Gene3D G3DSA:3.30.70.20 2 75 9.7E-20 T 14-10-2018 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15475 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 Gene3D G3DSA:3.40.190.10 30 251 9.6E-73 T 14-10-2018 VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 252 4.5E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 SMART SM00062 27 254 4.2E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 SUPERFAMILY SSF53850 6 252 2.04E-67 T 14-10-2018 VEJY3_18471 99da0303256ce0ca3c2e997096020048 259 Gene3D G3DSA:3.40.190.10 113 210 9.6E-73 T 14-10-2018 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Pfam PF00005 ABC transporter 25 190 4.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Pfam PF00005 ABC transporter 314 472 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 SUPERFAMILY SSF52540 5 261 5.02E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 SUPERFAMILY SSF52540 287 543 5.9E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Gene3D G3DSA:3.40.50.300 2 284 2.2E-79 T 14-10-2018 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Gene3D G3DSA:3.40.50.300 285 556 1.7E-78 T 14-10-2018 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 270 1.0E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 523 552 4.7E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 SMART SM00382 322 520 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24066 36132df8001f0beb477e127acf4bae8f 557 SMART SM00382 34 240 7.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 SUPERFAMILY SSF53850 24 342 2.03E-93 T 14-10-2018 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 308 2.7E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 8.0E-84 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 PIRSF PIRSF019574 1 345 5.6E-124 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 Gene3D G3DSA:3.40.190.10 129 318 4.4E-121 T 14-10-2018 VEJY3_07285 cd38c5b77d9aa98cff7accfd92cd1663 345 Gene3D G3DSA:3.40.190.10 29 312 4.4E-121 T 14-10-2018 VEJY3_13085 57a2dc9ca003e7adeca56e10bead958c 264 Pfam PF01578 Cytochrome C assembly protein 39 262 5.8E-46 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 SUPERFAMILY SSF53383 451 947 7.47E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 SUPERFAMILY SSF53383 17 437 4.64E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 9.7E-182 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 1.2E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Gene3D G3DSA:3.90.1150.10 760 896 5.9E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.693 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Gene3D G3DSA:3.40.640.10 95 353 5.0E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_20216 95099f406bc007b6ae4a5282ba3e1dd7 954 Gene3D G3DSA:3.40.640.10 522 749 6.1E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF52540 11 340 2.79E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SMART SM00490 826 910 5.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.5E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Pfam PF03461 TRCF domain 1010 1101 1.5E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.40.50.11140 355 453 5.3E-31 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.40.50.300 542 781 1.2E-237 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.40.50.11180 26 334 9.1E-122 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 3.2E-44 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.30.2060.10 130 215 9.1E-122 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF52540 523 783 1.13E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Pfam PF00271 Helicase conserved C-terminal domain 808 909 1.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SMART SM01058 479 576 1.3E-51 T 14-10-2018 IPR003711 CarD-like/TRCF domain VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF52540 352 466 3.29E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:2.30.30.840 483 541 1.2E-237 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SMART SM00982 1008 1108 7.2E-47 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Gene3D G3DSA:3.40.50.300 478 990 1.2E-237 T 14-10-2018 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF143517 994 1147 2.75E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1108 28.021 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF52540 782 990 4.92E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 1.1E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SMART SM00487 600 790 2.3E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_04510 9a86b6255ac7ea4f817d5ee40f02b1f1 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Pfam PF00512 His Kinase A (phospho-acceptor) domain 644 710 1.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Pfam PF00072 Response regulator receiver domain 893 1002 1.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SMART SM00388 644 710 1.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Gene3D G3DSA:3.30.565.10 709 869 2.6E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SUPERFAMILY SSF47384 629 711 4.51E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Gene3D G3DSA:3.40.50.2300 885 1025 2.2E-28 T 14-10-2018 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 821 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 793 807 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 846 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 865 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Gene3D G3DSA:1.10.4160.10 1 457 2.8E-16 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Gene3D G3DSA:1.10.287.130 610 708 6.4E-24 T 14-10-2018 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SMART SM00448 891 1002 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SUPERFAMILY SSF52172 889 1025 1.99E-31 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SMART SM00387 757 868 1.2E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 SUPERFAMILY SSF55874 700 864 2.36E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06835 d0b797b95f49011dadb345992d98e657 1103 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 757 866 2.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_22806 ded0987fd89913b86c90bc5c8be44a78 356 SUPERFAMILY SSF53850 13 346 5.37E-45 T 14-10-2018 VEJY3_22806 ded0987fd89913b86c90bc5c8be44a78 356 Gene3D G3DSA:3.40.190.10 16 303 7.5E-43 T 14-10-2018 VEJY3_22806 ded0987fd89913b86c90bc5c8be44a78 356 Gene3D G3DSA:3.40.190.10 84 340 7.5E-43 T 14-10-2018 VEJY3_22806 ded0987fd89913b86c90bc5c8be44a78 356 Pfam PF01547 Bacterial extracellular solute-binding protein 36 258 5.1E-18 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_00790 1cb9321b115664ec292417005e45a1b0 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 2.5E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_00790 1cb9321b115664ec292417005e45a1b0 341 SUPERFAMILY SSF161098 108 321 7.19E-16 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00790 1cb9321b115664ec292417005e45a1b0 341 Gene3D G3DSA:1.10.3720.10 102 331 7.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 SMART SM00829 13 324 3.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 Gene3D G3DSA:3.40.50.720 126 294 1.3E-123 T 14-10-2018 VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 SUPERFAMILY SSF51735 116 289 1.43E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 Gene3D G3DSA:3.90.180.10 17 325 1.3E-123 T 14-10-2018 VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.4E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 4.6E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_00130 82f4697fd1ee70188f0e611bf0b88a8e 326 SUPERFAMILY SSF50129 2 145 2.28E-45 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SUPERFAMILY SSF54211 477 596 3.54E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Pfam PF14492 Elongation Factor G, domain II 402 475 6.5E-29 T 14-10-2018 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Gene3D G3DSA:3.30.230.10 482 685 1.2E-81 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SMART SM00889 478 596 6.0E-59 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SUPERFAMILY SSF54980 601 690 1.33E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Gene3D G3DSA:3.40.50.300 1 292 7.8E-100 T 14-10-2018 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.7E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SUPERFAMILY SSF54980 402 479 8.63E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 101.737 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SMART SM00838 598 685 8.6E-48 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Pfam PF00679 Elongation factor G C-terminus 598 684 2.0E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SUPERFAMILY SSF50447 262 400 3.76E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 1.4E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Gene3D G3DSA:2.40.30.10 293 414 5.7E-44 T 14-10-2018 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Gene3D G3DSA:3.30.70.240 602 672 1.2E-81 T 14-10-2018 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 SUPERFAMILY SSF52540 3 278 3.81E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Pfam PF03764 Elongation factor G, domain IV 477 595 9.9E-42 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEJY3_12560 ff931d4fdf6827f9a904f94ce477b201 696 Gene3D G3DSA:3.30.70.870 431 481 6.2E-21 T 14-10-2018 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 SMART SM00354 1 71 2.4E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 SUPERFAMILY SSF53822 60 332 2.36E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 14-10-2018 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 Gene3D G3DSA:3.40.50.2300 56 306 1.7E-79 T 14-10-2018 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.2E-40 T 14-10-2018 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_01260 c8b7e77e1e1280381ef9ccecd4049b87 335 Gene3D G3DSA:3.40.50.2300 160 289 1.7E-79 T 14-10-2018 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 Gene3D G3DSA:1.10.8.60 177 255 9.9E-25 T 14-10-2018 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 312 1.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 332 1.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 SUPERFAMILY SSF46689 219 331 5.38E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 Gene3D G3DSA:3.40.50.300 1 176 1.4E-57 T 14-10-2018 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 Pfam PF02954 Bacterial regulatory protein, Fis family 296 323 6.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 Pfam PF00158 Sigma-54 interaction domain 5 167 2.0E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 5.9E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 5.9E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 5.9E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 SUPERFAMILY SSF52540 4 237 1.95E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 SMART SM00382 25 177 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05715 2a1f6f8b0f31c7a625ce7bd0d5ad756d 335 Gene3D G3DSA:1.10.10.60 256 331 3.1E-7 T 14-10-2018 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 SUPERFAMILY SSF55826 218 390 1.57E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.7E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 PIRSF PIRSF001535 1 571 1.0E-264 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Pfam PF03129 Anticodon binding domain 475 568 6.3E-22 T 14-10-2018 IPR004154 Anticodon-binding VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 9.5E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 SUPERFAMILY SSF55681 10 478 6.64E-99 T 14-10-2018 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Gene3D G3DSA:3.30.930.10 11 465 4.9E-234 T 14-10-2018 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Gene3D G3DSA:3.90.960.10 240 389 4.9E-234 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 SUPERFAMILY SSF52954 463 570 2.42E-33 T 14-10-2018 VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Gene3D G3DSA:3.40.50.800 4 555 4.9E-234 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VEJY3_12155 8cbf300c802d10c4d7f6fa0b1e966081 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.032 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VEJY3_14180 d4dc158e909449e02408aa9819a1a925 91 Pfam PF04077 DsrH like protein 10 86 1.4E-23 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VEJY3_14180 d4dc158e909449e02408aa9819a1a925 91 SUPERFAMILY SSF75169 1 90 3.39E-23 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_14180 d4dc158e909449e02408aa9819a1a925 91 Gene3D G3DSA:3.40.1260.10 1 90 2.0E-25 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_14180 d4dc158e909449e02408aa9819a1a925 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 1.5E-26 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VEJY3_10355 05524e70c43b8067724a3986627b843d 636 Pfam PF00989 PAS fold 94 165 2.2E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_10355 05524e70c43b8067724a3986627b843d 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 82 197 4.2E-11 T 14-10-2018 IPR000014 PAS domain VEJY3_10355 05524e70c43b8067724a3986627b843d 636 Pfam PF00563 EAL domain 382 614 4.1E-62 T 14-10-2018 IPR001633 EAL domain VEJY3_10355 05524e70c43b8067724a3986627b843d 636 Gene3D G3DSA:3.20.20.450 373 628 4.6E-70 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_10355 05524e70c43b8067724a3986627b843d 636 SMART SM00052 374 620 6.8E-59 T 14-10-2018 IPR001633 EAL domain VEJY3_10355 05524e70c43b8067724a3986627b843d 636 Gene3D G3DSA:3.30.450.20 81 212 6.2E-14 T 14-10-2018 VEJY3_10355 05524e70c43b8067724a3986627b843d 636 SUPERFAMILY SSF55785 83 196 6.47E-14 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_10355 05524e70c43b8067724a3986627b843d 636 SUPERFAMILY SSF141868 381 623 8.37E-67 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_10355 05524e70c43b8067724a3986627b843d 636 SMART SM00091 85 151 0.0011 T 14-10-2018 IPR000014 PAS domain VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SMART SM00357 23 79 4.0E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Pfam PF00773 RNB domain 193 521 4.5E-85 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Pfam PF00575 S1 RNA binding domain 565 645 1.1E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SUPERFAMILY SSF50249 83 173 4.46E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 41.954 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Gene3D G3DSA:2.40.50.140 1 82 7.9E-26 T 14-10-2018 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Gene3D G3DSA:2.40.50.640 83 157 1.9E-29 T 14-10-2018 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SUPERFAMILY SSF50249 186 562 1.77E-107 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SUPERFAMILY SSF50249 8 80 1.5E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SUPERFAMILY SSF50249 568 649 3.26E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SMART SM00316 566 650 2.2E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Gene3D G3DSA:2.40.50.140 565 651 4.9E-33 T 14-10-2018 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 SMART SM00955 193 523 2.5E-110 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_21201 f99a05d21db80da3abda0f23c63b98e1 666 Pfam PF08206 Ribonuclease B OB domain 24 78 1.2E-15 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 Gene3D G3DSA:3.30.1330.60 176 293 7.5E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 SUPERFAMILY SSF103088 161 287 2.09E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 2.2E-166 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 Gene3D G3DSA:2.60.40.2540 22 175 8.7E-57 T 14-10-2018 VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 Pfam PF00691 OmpA family 192 282 6.0E-20 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_10960 538afe2585a18d3a3d1bbf6ab1a6601a 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 Gene3D G3DSA:2.130.10.10 120 328 2.7E-36 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 Pfam PF00400 WD domain, G-beta repeat 157 189 7.3E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 Gene3D G3DSA:2.130.10.10 21 119 7.1E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SMART SM00320 192 230 0.74 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SMART SM00320 151 189 3.0E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SMART SM00320 233 274 0.032 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SMART SM00320 285 323 250.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SMART SM00320 68 106 6.5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VEJY3_14205 e6b06cc4cb94921d9ccaef77032b7c06 328 SUPERFAMILY SSF50998 26 328 7.14E-43 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VEJY3_01375 0f1e8baca098fab2e799150fe28fa0c9 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01375 0f1e8baca098fab2e799150fe28fa0c9 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.069 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VEJY3_01375 0f1e8baca098fab2e799150fe28fa0c9 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 14-10-2018 VEJY3_01375 0f1e8baca098fab2e799150fe28fa0c9 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VEJY3_01375 0f1e8baca098fab2e799150fe28fa0c9 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.8E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.8E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.8E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.2E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 Gene3D G3DSA:3.30.1340.10 1 85 1.6E-25 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEJY3_13715 7b01dd6410a38ffccc38dd3c3f6cc51d 91 SUPERFAMILY SSF55594 4 90 6.8E-24 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.047 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Gene3D G3DSA:1.10.601.10 12 122 5.0E-27 T 14-10-2018 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Gene3D G3DSA:1.20.140.160 131 283 8.5E-15 T 14-10-2018 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Pfam PF04545 Sigma-70, region 4 229 279 7.7E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 1.2E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 SUPERFAMILY SSF88946 11 122 1.27E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_14920 0cb182e9fd0e9e2e603ddd4619996533 285 SUPERFAMILY SSF88659 196 281 1.12E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_05465 402d71de6d3bb065948a13fbb7718c35 289 Gene3D G3DSA:3.30.2010.10 68 161 7.5E-38 T 14-10-2018 VEJY3_05465 402d71de6d3bb065948a13fbb7718c35 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.085 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VEJY3_05465 402d71de6d3bb065948a13fbb7718c35 289 Pfam PF01435 Peptidase family M48 78 286 3.0E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 SUPERFAMILY SSF52540 198 677 2.66E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 5.5E-41 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 3.2E-48 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Pfam PF13361 UvrD-like helicase C-terminal domain 597 667 3.2E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Gene3D G3DSA:1.10.10.160 300 416 7.4E-49 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Gene3D G3DSA:3.40.50.300 200 498 7.4E-49 T 14-10-2018 VEJY3_18996 9f00435012cc939cb261560ffba24b87 689 Gene3D G3DSA:3.40.50.300 507 681 4.9E-29 T 14-10-2018 VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 Gene3D G3DSA:2.40.30.170 42 267 7.4E-72 T 14-10-2018 VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 Gene3D G3DSA:2.40.420.20 36 334 7.4E-72 T 14-10-2018 VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 251 8.1E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 Gene3D G3DSA:1.10.287.470 90 149 7.4E-72 T 14-10-2018 VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 Gene3D G3DSA:2.40.50.100 56 188 7.4E-72 T 14-10-2018 VEJY3_05735 4eca360729988a787a7b19efcbb482a0 343 SUPERFAMILY SSF111369 47 264 1.44E-31 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 SUPERFAMILY SSF53067 198 384 2.13E-45 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.254 T 14-10-2018 IPR020823 Cell division protein FtsA VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 SMART SM00842 10 196 4.5E-96 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.5E-29 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 PIRSF PIRSF003101 1 420 5.5E-147 T 14-10-2018 IPR020823 Cell division protein FtsA VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Gene3D G3DSA:3.90.640.10 235 300 1.6E-111 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Pfam PF14450 Cell division protein FtsA 207 381 6.2E-24 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Gene3D G3DSA:3.30.420.40 13 379 1.6E-111 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Gene3D G3DSA:3.30.420.40 197 359 1.6E-111 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 Gene3D G3DSA:3.30.1490.110 87 169 1.6E-111 T 14-10-2018 VEJY3_02095 adb1810c7256f54627687d918d9cd7e5 420 SUPERFAMILY SSF53067 8 221 3.63E-60 T 14-10-2018 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 1.6E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 1.6E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 1.6E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 142 151 1.6E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 SUPERFAMILY SSF63380 9 100 2.69E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 Pfam PF00970 Oxidoreductase FAD-binding domain 22 95 2.4E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 Gene3D G3DSA:3.40.50.80 104 254 5.4E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 Gene3D G3DSA:2.40.30.10 2 102 1.5E-23 T 14-10-2018 VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 SUPERFAMILY SSF52343 112 251 3.67E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_23626 c2ce5b1d9fb0c3d8dd0252aa5dd74cc5 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 2.3E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 Gene3D G3DSA:1.10.260.40 1 55 8.6E-22 T 14-10-2018 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 Gene3D G3DSA:3.40.50.2300 160 289 1.5E-73 T 14-10-2018 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 SUPERFAMILY SSF47413 1 60 9.38E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 SUPERFAMILY SSF53822 61 330 5.5E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 Gene3D G3DSA:3.40.50.2300 56 305 1.5E-73 T 14-10-2018 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 6.2E-37 T 14-10-2018 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 SMART SM00354 1 71 1.7E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12430 85dc629efe63201dd76129915e84c31c 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22546 e65b9492640ff8c2424f59174e602afd 129 Gene3D G3DSA:1.20.1290.10 2 125 7.5E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_22546 e65b9492640ff8c2424f59174e602afd 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 113 4.0E-22 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_22546 e65b9492640ff8c2424f59174e602afd 129 SUPERFAMILY SSF69118 4 122 3.4E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_21406 1fdaad06c5ed01cc872deb49f6c240ba 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 385 3.9E-142 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VEJY3_21406 1fdaad06c5ed01cc872deb49f6c240ba 388 SUPERFAMILY SSF53383 4 387 4.71E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_21406 1fdaad06c5ed01cc872deb49f6c240ba 388 Gene3D G3DSA:3.40.640.10 65 289 4.1E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_21406 1fdaad06c5ed01cc872deb49f6c240ba 388 Pfam PF00155 Aminotransferase class I and II 56 374 7.9E-37 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_21406 1fdaad06c5ed01cc872deb49f6c240ba 388 Gene3D G3DSA:3.90.1150.10 14 381 4.1E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 SUPERFAMILY SSF53850 90 293 6.33E-38 T 14-10-2018 VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 Pfam PF03466 LysR substrate binding domain 90 293 9.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 Gene3D G3DSA:1.10.10.10 3 90 9.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 Gene3D G3DSA:3.40.190.10 92 290 8.3E-60 T 14-10-2018 VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 Gene3D G3DSA:3.40.190.10 164 264 8.3E-60 T 14-10-2018 VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 SUPERFAMILY SSF46785 4 113 8.05E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09065 e536f5f8bebf44c072aec7242d156a71 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:3.30.450.220 49 205 3.7E-62 T 14-10-2018 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SMART SM00387 592 709 3.3E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Pfam PF00072 Response regulator receiver domain 735 845 7.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SMART SM00448 733 845 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:3.40.50.2300 714 849 2.7E-31 T 14-10-2018 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SUPERFAMILY SSF55874 534 707 2.36E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:3.30.565.10 546 712 1.2E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:3.30.450.20 342 470 1.2E-8 T 14-10-2018 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 7 359 5.0E-177 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SUPERFAMILY SSF52172 732 851 3.13E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 687 6.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 662 6.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 6.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 706 6.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:1.10.287.130 471 545 1.1E-21 T 14-10-2018 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SUPERFAMILY SSF103190 50 268 7.14E-67 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SUPERFAMILY SSF47384 468 546 3.53E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 545 7.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Gene3D G3DSA:2.20.20.100 206 269 2.4E-32 T 14-10-2018 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 SMART SM00388 480 545 1.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Pfam PF09308 LuxQ, periplasmic 39 276 2.8E-96 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VEJY3_17536 791443ddc8144436c36061ce91e7b5dd 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 707 1.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 Gene3D G3DSA:3.40.190.10 92 289 2.5E-58 T 14-10-2018 VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 Gene3D G3DSA:3.40.190.10 163 262 2.5E-58 T 14-10-2018 VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 SUPERFAMILY SSF53850 89 294 3.69E-46 T 14-10-2018 VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 SUPERFAMILY SSF46785 5 111 1.54E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 Gene3D G3DSA:1.10.10.10 3 91 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18371 880498f13e9d6cc97ef81b26509d4da2 306 Pfam PF03466 LysR substrate binding domain 88 291 3.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Gene3D G3DSA:3.40.30.10 480 606 2.7E-33 T 14-10-2018 VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 1.2E-28 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 SUPERFAMILY SSF52833 501 604 4.55E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 SUPERFAMILY SSF74863 39 152 1.7E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 606 38.367 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 215 415 3.1E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Gene3D G3DSA:2.60.40.1250 35 169 4.3E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 ProSitePatterns PS00194 Thioredoxin family active site. 515 533 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_14565 9ac6e88284b2e559b3ea98d7f8fe8b3b 606 Pfam PF13899 Thioredoxin-like 496 558 1.6E-12 T 14-10-2018 VEJY3_01035 7292ae645e4f4935d53640712f6da4f0 362 Gene3D G3DSA:3.40.50.2000 67 184 3.3E-9 T 14-10-2018 VEJY3_01035 7292ae645e4f4935d53640712f6da4f0 362 Gene3D G3DSA:3.40.50.2000 185 296 3.3E-9 T 14-10-2018 VEJY3_01035 7292ae645e4f4935d53640712f6da4f0 362 SUPERFAMILY SSF53756 19 330 2.72E-15 T 14-10-2018 VEJY3_01035 7292ae645e4f4935d53640712f6da4f0 362 Pfam PF13692 Glycosyl transferases group 1 200 305 3.9E-12 T 14-10-2018 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.5E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF54791 555 640 5.06E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 14-10-2018 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF55666 146 236 2.24E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF00013 KH domain 557 615 1.6E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Gene3D G3DSA:3.30.230.70 2 229 1.2E-75 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.065 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF46915 240 321 3.66E-19 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Gene3D G3DSA:3.30.230.70 234 550 4.4E-114 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF54211 299 493 2.23E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SMART SM00316 621 691 3.3E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 3.2E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF54211 5 145 5.57E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF50249 621 704 2.4E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Gene3D G3DSA:3.30.1370.10 551 622 1.4E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 PIRSF PIRSF005499 2 711 8.9E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SUPERFAMILY SSF55666 451 550 1.96E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 SMART SM00322 553 618 3.6E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 6.1E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_12670 c3496eb372aa06b3c411f78c8b5fc4bb 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.7E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 507 8.7E-60 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Gene3D G3DSA:3.40.1190.20 224 507 7.9E-78 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Gene3D G3DSA:3.40.50.10260 5 218 8.8E-59 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 213 3.0E-51 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 SUPERFAMILY SSF53613 230 507 5.14E-70 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 PIRSF PIRSF017184 7 508 4.2E-129 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.501 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Pfam PF03853 YjeF-related protein N-terminus 32 193 5.0E-43 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Pfam PF01256 Carbohydrate kinase 253 502 1.1E-50 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 SUPERFAMILY SSF64153 8 250 9.42E-63 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VEJY3_17796 d99cae43e252421a65bd9701a138e6fa 508 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 507 21.146 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 Pfam PF00108 Thiolase, N-terminal domain 6 260 6.3E-83 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 6.4E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 2.2E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 PIRSF PIRSF000429 1 402 1.9E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 SUPERFAMILY SSF53901 269 400 1.77E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 Gene3D G3DSA:3.40.47.10 7 273 6.2E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 SUPERFAMILY SSF53901 4 266 2.47E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VEJY3_20616 7654ccdc630d2425927c0663d765d71d 403 Gene3D G3DSA:3.40.47.10 125 398 6.2E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_13855 50d2bbfa1c6ba3ca473472c94a4338f6 281 Pfam PF13401 AAA domain 42 168 3.8E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13855 50d2bbfa1c6ba3ca473472c94a4338f6 281 SUPERFAMILY SSF52540 5 260 1.65E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13855 50d2bbfa1c6ba3ca473472c94a4338f6 281 Gene3D G3DSA:3.40.50.300 27 183 8.5E-14 T 14-10-2018 VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 SUPERFAMILY SSF46785 17 111 3.71E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 SMART SM00345 24 82 2.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 Gene3D G3DSA:1.10.10.10 2 80 1.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 4.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 Pfam PF07729 FCD domain 92 217 5.3E-27 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 SUPERFAMILY SSF48008 88 224 1.12E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 SMART SM00895 92 219 9.4E-25 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_07860 c484215e468feec7fbcfa75d6f97cea8 239 Gene3D G3DSA:1.20.120.530 81 231 6.3E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_16221 a1c44ae920cf1307faa4b4f38865bd1f 447 SUPERFAMILY SSF111283 8 445 2.09E-94 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEJY3_16221 a1c44ae920cf1307faa4b4f38865bd1f 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 1.2E-45 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEJY3_16221 a1c44ae920cf1307faa4b4f38865bd1f 447 Gene3D G3DSA:3.30.2290.10 1 211 5.3E-33 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Gene3D G3DSA:1.20.140.10 232 382 1.7E-53 T 14-10-2018 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Gene3D G3DSA:2.40.110.10 120 231 2.3E-42 T 14-10-2018 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 7.9E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 SUPERFAMILY SSF47203 225 378 1.24E-58 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 PIRSF PIRSF016578 4 192 4.2E-11 T 14-10-2018 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 PIRSF PIRSF016578 225 378 2.0E-13 T 14-10-2018 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 SUPERFAMILY SSF56645 1 240 3.4E-78 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Gene3D G3DSA:1.10.540.10 1 119 1.5E-34 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_18561 25e1e9a2ad595db43f6ed7b81e4ac3a4 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 3.7E-26 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_11200 3fb85aff47ff1b9a0c2d0a8d20192f03 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 3.6E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VEJY3_18006 16eb831f002c35934a1cd8a288e17e57 318 SUPERFAMILY SSF51197 12 316 9.62E-81 T 14-10-2018 VEJY3_18006 16eb831f002c35934a1cd8a288e17e57 318 Pfam PF08943 CsiD 17 316 5.9E-142 T 14-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 VEJY3_18006 16eb831f002c35934a1cd8a288e17e57 318 Gene3D G3DSA:3.60.130.10 11 318 4.4E-106 T 14-10-2018 VEJY3_18006 16eb831f002c35934a1cd8a288e17e57 318 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 15 317 6.0E-97 T 14-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 SUPERFAMILY SSF56601 260 591 1.24E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 SUPERFAMILY SSF56519 87 258 2.62E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Gene3D G3DSA:3.90.1310.30 83 258 3.9E-46 T 14-10-2018 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Gene3D G3DSA:3.40.710.10 320 502 6.3E-106 T 14-10-2018 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 1.2E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Gene3D G3DSA:3.30.450.330 260 584 6.3E-106 T 14-10-2018 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 43 595 44.713 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_02050 dd666ea28135d625a82809b4b898e415 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 3.9E-21 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 SUPERFAMILY SSF51161 292 403 1.03E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 Gene3D G3DSA:2.160.10.10 287 403 4.2E-33 T 14-10-2018 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.492 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 SUPERFAMILY SSF53448 4 358 1.55E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 Pfam PF00483 Nucleotidyl transferase 6 273 2.0E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_04755 5917f3a88efaf1522b15a9619610a647 405 Gene3D G3DSA:3.90.550.10 2 286 1.0E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_02815 829312d6a35733baf7d61df2ec03660e 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.067 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VEJY3_02815 829312d6a35733baf7d61df2ec03660e 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VEJY3_02815 829312d6a35733baf7d61df2ec03660e 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.1E-101 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.3E-8 T 14-10-2018 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.3E-8 T 14-10-2018 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.3E-8 T 14-10-2018 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 Gene3D G3DSA:3.40.50.720 3 274 1.9E-137 T 14-10-2018 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.4E-55 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 Gene3D G3DSA:3.90.25.10 194 329 1.9E-137 T 14-10-2018 VEJY3_24041 753fd0171833b7644c2dd1a9819c0297 338 SUPERFAMILY SSF51735 1 337 1.44E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17816 93963b9b3d9fa5a5d6638add7d37621f 305 Gene3D G3DSA:3.40.50.1820 10 285 4.7E-87 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17816 93963b9b3d9fa5a5d6638add7d37621f 305 Gene3D G3DSA:1.10.10.800 142 230 4.7E-87 T 14-10-2018 VEJY3_17816 93963b9b3d9fa5a5d6638add7d37621f 305 SUPERFAMILY SSF53474 3 305 4.48E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17816 93963b9b3d9fa5a5d6638add7d37621f 305 Pfam PF01738 Dienelactone hydrolase family 29 133 1.2E-5 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEJY3_04805 63c51fd141acbe5595d8cd985f8bea17 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.357 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VEJY3_04805 63c51fd141acbe5595d8cd985f8bea17 263 Gene3D G3DSA:3.40.50.150 9 263 6.8E-56 T 14-10-2018 VEJY3_04805 63c51fd141acbe5595d8cd985f8bea17 263 Pfam PF08241 Methyltransferase domain 52 148 6.6E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEJY3_04805 63c51fd141acbe5595d8cd985f8bea17 263 SUPERFAMILY SSF53335 7 251 7.97E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_02510 5f2f9edf800c1da6f7e93cd66f573a39 108 Gene3D G3DSA:3.30.160.100 1 105 4.4E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEJY3_02510 5f2f9edf800c1da6f7e93cd66f573a39 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.3E-23 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEJY3_02510 5f2f9edf800c1da6f7e93cd66f573a39 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 2.4E-30 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEJY3_02510 5f2f9edf800c1da6f7e93cd66f573a39 108 SUPERFAMILY SSF69754 1 103 4.19E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Gene3D G3DSA:2.40.30.10 206 334 1.3E-51 T 14-10-2018 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 SUPERFAMILY SSF50447 205 301 7.07E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.228 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.4E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Gene3D G3DSA:2.40.30.10 338 393 2.0E-29 T 14-10-2018 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 SUPERFAMILY SSF52540 6 219 1.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.4E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 SUPERFAMILY SSF50465 298 393 1.3E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEJY3_14160 9f684598f0e654f7190db61fcedd827b 394 Gene3D G3DSA:3.40.50.300 1 203 9.3E-70 T 14-10-2018 VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 SUPERFAMILY SSF51735 7 256 3.84E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 Pfam PF00106 short chain dehydrogenase 8 191 8.7E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17926 4ee4dcb9eebd9f6eb7d92d5d0c8ed175 259 Gene3D G3DSA:3.40.50.720 1 258 5.8E-64 T 14-10-2018 VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.289 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 Gene3D G3DSA:3.40.50.150 39 259 5.6E-75 T 14-10-2018 VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 SUPERFAMILY SSF53335 27 257 1.55E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 258 2.2E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VEJY3_00435 92cc5e818f0401c973be25750fdf5183 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.3E-98 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 SUPERFAMILY SSF48592 3 230 2.09E-65 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 Gene3D G3DSA:3.30.260.10 138 410 2.2E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.456 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.2E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.2E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.2E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.2E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.2E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 SUPERFAMILY SSF48592 372 525 8.24E-32 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 SUPERFAMILY SSF52029 185 376 2.24E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 Gene3D G3DSA:1.10.560.10 8 521 2.2E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEJY3_14505 ffc8daf9830b41b152ee3b63bcacd51d 548 Gene3D G3DSA:3.50.7.10 173 379 2.2E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Pfam PF12631 MnmE helical domain 122 450 1.5E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.3E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.4E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Gene3D G3DSA:1.20.120.430 121 453 2.7E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.819 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 SUPERFAMILY SSF52540 70 371 7.97E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Gene3D G3DSA:3.30.1360.120 1 120 7.1E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 SUPERFAMILY SSF116878 120 453 1.31E-52 T 14-10-2018 VEJY3_00015 d671d2116e396e98f8d81a9ad9ca94ca 453 Gene3D G3DSA:3.40.50.300 216 381 2.7E-103 T 14-10-2018 VEJY3_00815 25bfa849c56be4729e478d5408b46dc9 141 PIRSF PIRSF029598 3 135 1.9E-38 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VEJY3_00815 25bfa849c56be4729e478d5408b46dc9 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 6.1E-15 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 PIRSF PIRSF006171 3 228 6.1E-80 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 Pfam PF12431 Transcriptional regulator 134 162 2.6E-7 T 14-10-2018 IPR028141 Transcriptional regulator VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 SMART SM00448 5 118 5.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 SUPERFAMILY SSF52172 5 128 1.71E-30 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_07940 1cd11d7aaacea978971186f8256cfeb0 228 Gene3D G3DSA:3.40.50.2300 2 147 2.2E-26 T 14-10-2018 VEJY3_03475 68d5f17be8cf0893685ae9ecc10d3013 230 Gene3D G3DSA:2.40.160.40 36 228 1.7E-12 T 14-10-2018 VEJY3_03475 68d5f17be8cf0893685ae9ecc10d3013 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 46 206 6.9E-7 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin VEJY3_06250 95ca2f8178b30d374ed40c75fdb3013c 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 6.4E-77 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEJY3_06250 95ca2f8178b30d374ed40c75fdb3013c 216 SUPERFAMILY SSF53335 3 214 1.13E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_06250 95ca2f8178b30d374ed40c75fdb3013c 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.211 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEJY3_06250 95ca2f8178b30d374ed40c75fdb3013c 216 PIRSF PIRSF023956 1 216 9.9E-75 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEJY3_06250 95ca2f8178b30d374ed40c75fdb3013c 216 Gene3D G3DSA:3.40.50.150 1 216 8.9E-64 T 14-10-2018 VEJY3_04555 6212bdcf7b577223c1946089133ba1a0 59 Gene3D G3DSA:2.20.25.10 8 59 1.6E-24 T 14-10-2018 VEJY3_04555 6212bdcf7b577223c1946089133ba1a0 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.272 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 VEJY3_04555 6212bdcf7b577223c1946089133ba1a0 59 SUPERFAMILY SSF158997 1 54 8.76E-21 T 14-10-2018 VEJY3_04555 6212bdcf7b577223c1946089133ba1a0 59 Pfam PF03966 Trm112p-like protein 2 41 1.1E-11 T 14-10-2018 IPR005651 Trm112-like VEJY3_09720 abf8d8dbc3231bc4cc6545e8f57a1611 142 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 3 120 5.1E-7 T 14-10-2018 IPR010027 Bacteriophage lambda, GpG, minor tail VEJY3_24156 9aca2f41e9abcd6b778f3d198f97a58b 359 Pfam PF01263 Aldose 1-epimerase 30 354 8.0E-89 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEJY3_24156 9aca2f41e9abcd6b778f3d198f97a58b 359 SUPERFAMILY SSF74650 19 356 8.79E-107 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_24156 9aca2f41e9abcd6b778f3d198f97a58b 359 PIRSF PIRSF005096 11 359 3.6E-116 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_24156 9aca2f41e9abcd6b778f3d198f97a58b 359 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 181 190 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_24156 9aca2f41e9abcd6b778f3d198f97a58b 359 Gene3D G3DSA:2.70.98.10 17 358 2.9E-112 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_14835 783140f356581f5ac5a785f2261dc480 43 SUPERFAMILY SSF54928 5 34 5.1E-5 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 Gene3D G3DSA:1.10.10.10 4 88 8.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 SUPERFAMILY SSF53850 91 291 1.46E-37 T 14-10-2018 VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 Gene3D G3DSA:3.40.190.10 92 287 5.0E-56 T 14-10-2018 VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 SUPERFAMILY SSF46785 4 110 5.86E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 Pfam PF03466 LysR substrate binding domain 91 290 2.5E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_22361 6fc8438080a8dfbae301223864ca5e55 293 Gene3D G3DSA:3.40.190.10 164 262 5.0E-56 T 14-10-2018 VEJY3_10180 f6719cd30284170b53128427cee12b64 377 Gene3D G3DSA:2.40.37.10 7 372 7.9E-142 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_10180 f6719cd30284170b53128427cee12b64 377 Gene3D G3DSA:3.20.20.10 15 242 7.9E-142 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_10180 f6719cd30284170b53128427cee12b64 377 SUPERFAMILY SSF51419 14 242 1.22E-42 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_10180 f6719cd30284170b53128427cee12b64 377 SUPERFAMILY SSF50621 212 359 6.7E-23 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_10180 f6719cd30284170b53128427cee12b64 377 PIRSF PIRSF038941 1 372 3.3E-126 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VEJY3_10180 f6719cd30284170b53128427cee12b64 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.8E-4 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEJY3_07135 ee6f4449291013e2818c29e7315eaf75 264 Pfam PF03942 DTW domain 45 236 2.2E-41 T 14-10-2018 IPR005636 DTW VEJY3_07135 ee6f4449291013e2818c29e7315eaf75 264 SMART SM01144 42 242 1.1E-61 T 14-10-2018 IPR005636 DTW VEJY3_22226 e45389249d08c28f563035b6d187bb2f 328 SUPERFAMILY SSF53659 3 325 6.77E-109 T 14-10-2018 VEJY3_22226 e45389249d08c28f563035b6d187bb2f 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 322 5.2E-105 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VEJY3_22226 e45389249d08c28f563035b6d187bb2f 328 Gene3D G3DSA:3.40.718.10 1 326 6.1E-137 T 14-10-2018 VEJY3_22226 e45389249d08c28f563035b6d187bb2f 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 325 1.7E-112 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 SUPERFAMILY SSF56059 104 322 2.65E-68 T 14-10-2018 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.1E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.9E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 SUPERFAMILY SSF52440 1 103 3.74E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Gene3D G3DSA:3.30.1490.20 121 190 2.5E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 SUPERFAMILY SSF51246 329 424 2.83E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 SMART SM01209 103 296 1.1E-141 T 14-10-2018 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 SMART SM01210 330 423 2.3E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.5E-187 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Gene3D G3DSA:3.40.50.20 2 95 6.6E-37 T 14-10-2018 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Gene3D G3DSA:3.90.600.10 330 429 3.2E-34 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.9E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.988 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_14710 3379278a651c8a74d2ba05038e517bf1 429 Gene3D G3DSA:3.30.470.20 191 329 1.2E-62 T 14-10-2018 VEJY3_00145 a02acf4a863ea48e44d08f32c5bdc61a 207 SUPERFAMILY SSF54980 139 204 2.88E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_00145 a02acf4a863ea48e44d08f32c5bdc61a 207 Gene3D G3DSA:3.30.230.30 2 136 6.0E-50 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily VEJY3_00145 a02acf4a863ea48e44d08f32c5bdc61a 207 SUPERFAMILY SSF54211 5 134 7.59E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_00145 a02acf4a863ea48e44d08f32c5bdc61a 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 3.2E-11 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VEJY3_00145 a02acf4a863ea48e44d08f32c5bdc61a 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 9.6E-26 T 14-10-2018 IPR001498 Impact, N-terminal VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 SUPERFAMILY SSF143800 1 68 2.63E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 Gene3D G3DSA:2.30.170.50 1 71 1.2E-33 T 14-10-2018 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 6.7E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 6.7E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.7E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 Pfam PF01197 Ribosomal protein L31 1 66 3.2E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01270 8fe9abf4a70978c4a7ca89fbf3f8a21b 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.239 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Gene3D G3DSA:3.20.20.70 30 280 9.0E-176 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.18 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 SUPERFAMILY SSF51366 282 477 2.98E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 2.1E-94 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 30.515 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 474 6.4E-58 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 SUPERFAMILY SSF51366 23 276 3.41E-81 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_10270 053f5f6ef38ce477660b29989a25fc59 479 Gene3D G3DSA:3.20.20.70 281 473 9.0E-176 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 SUPERFAMILY SSF102114 43 263 1.2E-17 T 14-10-2018 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 Gene3D G3DSA:3.20.20.70 20 290 1.4E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 Pfam PF13353 4Fe-4S single cluster domain 34 157 2.6E-11 T 14-10-2018 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 PIRSF PIRSF000371 74 292 1.8E-63 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 PIRSF PIRSF000371 14 82 6.2E-28 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEJY3_08975 31087d91d6bdf9a5cefdab812385e9b1 292 Pfam PF04055 Radical SAM superfamily 41 222 3.8E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 6.8E-36 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 4.8E-81 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 SUPERFAMILY SSF56784 4 181 7.59E-49 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 4.2E-39 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 Gene3D G3DSA:3.40.50.1000 2 183 5.8E-61 T 14-10-2018 IPR023214 HAD superfamily VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 PIRSF PIRSF004682 1 183 9.7E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VEJY3_03260 d5cf46766fa84d99d55a048c5fe9e7e7 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.9E-13 T 14-10-2018 VEJY3_21436 cf4527ead05824c39d056aca68cd7b79 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 169 356 4.7E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_21436 cf4527ead05824c39d056aca68cd7b79 359 Gene3D G3DSA:1.10.3720.10 144 354 7.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_21436 cf4527ead05824c39d056aca68cd7b79 359 SUPERFAMILY SSF161098 150 341 1.74E-19 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_21436 cf4527ead05824c39d056aca68cd7b79 359 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 51 9.7E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 Gene3D G3DSA:3.90.770.10 92 405 1.9E-110 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 SUPERFAMILY SSF56542 21 409 3.92E-79 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 SUPERFAMILY SSF55035 146 261 1.83E-35 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 Gene3D G3DSA:3.30.70.420 146 261 1.9E-110 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.5E-112 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_19636 8b0e3e6394b6992b86a472ac750a7f57 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 1.1E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 Pfam PF00005 ABC transporter 25 173 2.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 SUPERFAMILY SSF52540 5 226 7.48E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 Gene3D G3DSA:3.40.50.300 3 263 5.5E-71 T 14-10-2018 VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 Pfam PF02687 FtsX-like permease family 554 642 7.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 SMART SM00382 34 221 8.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16526 4b0c00d99b133a62c7a2c899f1fa8498 649 Pfam PF12704 MacB-like periplasmic core domain 274 491 5.1E-41 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 SUPERFAMILY SSF103088 79 186 6.41E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 SUPERFAMILY SSF103647 22 77 1.44E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 Pfam PF00691 OmpA family 85 180 8.1E-19 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 PRINTS PR01021 OMPA domain signature 86 108 3.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 PRINTS PR01021 OMPA domain signature 116 131 3.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 PRINTS PR01021 OMPA domain signature 131 147 3.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_07750 de2c476aa1112cd3fb81f72a179e691c 206 Gene3D G3DSA:3.30.1330.60 61 185 1.6E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_08545 719598dd6f84519599ddcd2533782dcd 397 SMART SM00388 214 279 6.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08545 719598dd6f84519599ddcd2533782dcd 397 SUPERFAMILY SSF47384 197 276 3.73E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_08545 719598dd6f84519599ddcd2533782dcd 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 276 6.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08545 719598dd6f84519599ddcd2533782dcd 397 Gene3D G3DSA:1.10.287.130 167 300 3.5E-18 T 14-10-2018 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 Gene3D G3DSA:2.60.120.10 43 164 1.3E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 SUPERFAMILY SSF46785 165 245 2.24E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 Gene3D G3DSA:1.10.10.10 165 246 3.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 SMART SM00100 30 151 2.0E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 SMART SM00419 187 235 4.3E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_07330 e746ba57d34d031d65f91e18299f4890 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.2E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_14415 5cdd626abf5cc727c167fa2f6906be31 144 Pfam PF00581 Rhodanese-like domain 44 135 2.5E-17 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_14415 5cdd626abf5cc727c167fa2f6906be31 144 SMART SM00450 40 138 1.6E-20 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_14415 5cdd626abf5cc727c167fa2f6906be31 144 Gene3D G3DSA:3.40.250.10 23 143 1.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_14415 5cdd626abf5cc727c167fa2f6906be31 144 SUPERFAMILY SSF52821 15 143 5.11E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 Gene3D G3DSA:3.10.610.10 35 152 1.2E-34 T 14-10-2018 VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 SUPERFAMILY SSF54523 43 204 5.76E-57 T 14-10-2018 VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 Pfam PF11612 Type II secretion system (T2SS), protein J 60 197 9.3E-40 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 8.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00640 d62ac79849a7a6e980763c32506d9073 213 Gene3D G3DSA:2.10.70.20 154 202 1.4E-15 T 14-10-2018 VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 Gene3D G3DSA:3.90.1380.10 1 79 5.9E-32 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 367 2.5E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 Pfam PF14821 Threonine synthase N terminus 8 78 6.8E-9 T 14-10-2018 IPR029144 Threonine synthase, N-terminal VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 Gene3D G3DSA:3.40.50.1100 101 399 5.2E-137 T 14-10-2018 VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 Gene3D G3DSA:3.40.50.1100 83 392 5.2E-137 T 14-10-2018 VEJY3_02240 803ff9a6ca93668c7feaef9e9f468dac 426 SUPERFAMILY SSF53686 1 424 3.27E-130 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 Gene3D G3DSA:3.40.50.1820 6 263 7.7E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 2.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 Pfam PF12697 Alpha/beta hydrolase family 32 252 5.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_20931 2a9c691bb3dfd8a5aa0c0745afc140a3 267 SUPERFAMILY SSF53474 24 260 9.05E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 7.4E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 SMART SM00861 319 483 1.8E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.9E-28 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Gene3D G3DSA:3.40.50.920 495 621 5.8E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 SUPERFAMILY SSF52922 492 619 1.23E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Gene3D G3DSA:3.40.50.970 317 488 8.1E-65 T 14-10-2018 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 SUPERFAMILY SSF52518 317 504 2.59E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.938 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.7E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_03160 29930efaf5dbf5f9560bfcf1bcb98f60 621 SUPERFAMILY SSF52518 9 381 5.73E-76 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 Pfam PF13426 PAS domain 29 131 6.2E-19 T 14-10-2018 IPR000014 PAS domain VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SMART SM00091 144 214 20.0 T 14-10-2018 IPR000014 PAS domain VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SMART SM00091 19 85 8.7E-8 T 14-10-2018 IPR000014 PAS domain VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 Gene3D G3DSA:3.30.565.10 353 512 1.0E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SMART SM00387 394 509 7.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 Gene3D G3DSA:3.30.450.20 16 145 4.1E-33 T 14-10-2018 VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SMART SM00086 91 132 0.0037 T 14-10-2018 IPR001610 PAC motif VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SUPERFAMILY SSF55785 128 223 1.24E-5 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 7.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 7.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 7.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 7.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SUPERFAMILY SSF55874 355 506 1.96E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 506 9.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_18871 dc5a034b37abe7adaf1cd96870143b13 513 SUPERFAMILY SSF55785 27 132 1.15E-25 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_17141 8175a1833362262fd2baf5bf3588d4a6 84 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 77 7.6E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VEJY3_17141 8175a1833362262fd2baf5bf3588d4a6 84 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.0E-22 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VEJY3_17141 8175a1833362262fd2baf5bf3588d4a6 84 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 84 28.385 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 2.0E-18 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.537 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 PRINTS PR00625 DnaJ domain signature 238 253 4.1E-9 T 14-10-2018 IPR001623 DnaJ domain VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 PRINTS PR00625 DnaJ domain signature 262 282 4.1E-9 T 14-10-2018 IPR001623 DnaJ domain VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 PRINTS PR00625 DnaJ domain signature 220 238 4.1E-9 T 14-10-2018 IPR001623 DnaJ domain VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 SUPERFAMILY SSF46565 215 278 5.23E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 Gene3D G3DSA:1.10.3680.10 45 191 1.8E-26 T 14-10-2018 IPR029024 TerB-like VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 SMART SM00271 217 282 4.0E-18 T 14-10-2018 IPR001623 DnaJ domain VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 SUPERFAMILY SSF158682 5 231 2.88E-32 T 14-10-2018 IPR029024 TerB-like VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 Pfam PF00226 DnaJ domain 218 278 3.7E-12 T 14-10-2018 IPR001623 DnaJ domain VEJY3_01665 f64ad6981c816bb918c66adbdc61cf98 284 Gene3D G3DSA:1.10.287.110 196 282 3.2E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 280 411 1.8E-24 T 14-10-2018 VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 SUPERFAMILY SSF51658 1 268 1.13E-73 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 Gene3D G3DSA:3.10.180.10 421 606 2.7E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 Gene3D G3DSA:3.20.20.150 1 270 1.2E-69 T 14-10-2018 VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 Pfam PF01261 Xylose isomerase-like TIM barrel 20 218 8.3E-36 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 Gene3D G3DSA:3.10.180.10 272 419 1.7E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_18076 a94a43ad5bf97907718cc86f07c35b09 607 SUPERFAMILY SSF54593 281 605 8.0E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_09730 20ddf0148d3fd8830367146cdbd500f0 140 Gene3D G3DSA:3.30.70.1700 1 139 1.1E-8 T 14-10-2018 IPR038512 GpU-like superfamily VEJY3_09730 20ddf0148d3fd8830367146cdbd500f0 140 Pfam PF06141 Phage minor tail protein U 3 126 2.1E-8 T 14-10-2018 IPR009312 Minor tail protein U-like VEJY3_09730 20ddf0148d3fd8830367146cdbd500f0 140 SUPERFAMILY SSF143749 3 126 9.68E-11 T 14-10-2018 IPR035934 Phage tail protein-like superfamily VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 SMART SM00729 58 278 2.1E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 Pfam PF04055 Radical SAM superfamily 63 234 7.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 Gene3D G3DSA:1.10.10.920 370 463 1.3E-34 T 14-10-2018 VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 SUPERFAMILY SSF102114 12 450 2.35E-144 T 14-10-2018 VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 Gene3D G3DSA:3.80.30.20 7 369 9.9E-138 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 Pfam PF06969 HemN C-terminal domain 369 437 9.6E-12 T 14-10-2018 IPR010723 HemN, C-terminal VEJY3_00520 9047b67f68df913863b7e7793f08b610 463 PIRSF PIRSF000167 9 460 4.1E-174 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VEJY3_02220 8fe34a7f33b40fe11492320924277fe8 160 Gene3D G3DSA:3.50.30.40 1 160 3.8E-64 T 14-10-2018 VEJY3_02220 8fe34a7f33b40fe11492320924277fe8 160 SUPERFAMILY SSF89562 5 158 8.5E-48 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VEJY3_02220 8fe34a7f33b40fe11492320924277fe8 160 Pfam PF03737 Aldolase/RraA 5 152 4.3E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 1.5E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82693 568 668 1.73E-8 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.2090.10 732 837 1.3E-217 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82714 735 810 1.57E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82714 190 272 2.88E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.70.1440 679 919 1.3E-217 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82693 147 335 6.54E-9 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.70.1430 45 845 1.3E-217 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:1.20.1640.10 21 513 1.3E-217 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82693 45 139 1.33E-20 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82866 302 499 6.54E-38 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Pfam PF00873 AcrB/AcrD/AcrF family 21 1085 9.4E-149 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 SUPERFAMILY SSF82866 895 1088 6.41E-34 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.2090.10 185 275 1.3E-217 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.70.1430 570 678 1.3E-217 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:1.20.1640.10 514 1083 1.3E-217 T 14-10-2018 VEJY3_19681 fd7c9342d822078c6ce7ba512c87ae7f 1102 Gene3D G3DSA:3.30.70.1320 139 339 1.3E-217 T 14-10-2018 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 SUPERFAMILY SSF46785 6 57 7.36E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 SMART SM00420 6 58 7.3E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 SMART SM01134 73 233 9.2E-48 T 14-10-2018 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 Pfam PF00455 DeoR C terminal sensor domain 75 230 2.2E-39 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.1E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_21161 ed455a39f57f4f3c8ab89862014ad4b7 238 SUPERFAMILY SSF100950 76 231 4.92E-22 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_19101 85af2c53b6b0923c47985630630bdd3b 196 Pfam PF04011 LemA family 6 196 2.2E-67 T 14-10-2018 IPR007156 LemA VEJY3_19101 85af2c53b6b0923c47985630630bdd3b 196 SUPERFAMILY SSF140478 25 182 1.57E-54 T 14-10-2018 IPR023353 LemA-like domain superfamily VEJY3_19101 85af2c53b6b0923c47985630630bdd3b 196 Gene3D G3DSA:1.20.1440.20 14 196 2.9E-62 T 14-10-2018 IPR023353 LemA-like domain superfamily VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 Gene3D G3DSA:1.10.10.10 3 90 8.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.1E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.1E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.1E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.1E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 SUPERFAMILY SSF46785 5 84 1.54E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 SMART SM00418 5 83 2.5E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_14995 c66a66cc82a5a96ce46f86542581d227 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VEJY3_17266 77ce0ea16a4d5b5f7a6cc17bd60fdc4f 170 Gene3D G3DSA:2.60.120.10 13 159 9.1E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_17266 77ce0ea16a4d5b5f7a6cc17bd60fdc4f 170 Pfam PF12973 ChrR Cupin-like domain 28 105 1.1E-7 T 14-10-2018 IPR025979 ChrR-like cupin domain VEJY3_17266 77ce0ea16a4d5b5f7a6cc17bd60fdc4f 170 SUPERFAMILY SSF51182 28 140 7.84E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 SUPERFAMILY SSF56601 256 619 5.63E-97 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 SUPERFAMILY SSF56519 58 254 8.37E-56 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 1.3E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Gene3D G3DSA:3.90.1310.10 66 250 2.3E-53 T 14-10-2018 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Gene3D G3DSA:3.40.710.10 251 629 2.0E-94 T 14-10-2018 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Gene3D G3DSA:3.30.1390.30 87 162 2.3E-53 T 14-10-2018 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 4.5E-51 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VEJY3_03320 6b2d4455c2420bf74b2c4fda40ff5a38 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.542 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_22541 58a87487ff8c20982887a1608b973605 233 Gene3D G3DSA:1.10.10.10 6 81 4.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22541 58a87487ff8c20982887a1608b973605 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22541 58a87487ff8c20982887a1608b973605 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22541 58a87487ff8c20982887a1608b973605 233 Gene3D G3DSA:1.20.120.530 86 221 7.8E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_22541 58a87487ff8c20982887a1608b973605 233 SUPERFAMILY SSF48008 87 215 1.8E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_22541 58a87487ff8c20982887a1608b973605 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 9.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22541 58a87487ff8c20982887a1608b973605 233 Pfam PF07729 FCD domain 90 213 1.3E-19 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_22541 58a87487ff8c20982887a1608b973605 233 SMART SM00895 90 214 1.8E-10 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_22541 58a87487ff8c20982887a1608b973605 233 SUPERFAMILY SSF46785 14 84 1.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22541 58a87487ff8c20982887a1608b973605 233 SMART SM00345 22 80 2.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 SUPERFAMILY SSF53822 61 330 1.41E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 SMART SM00354 1 71 7.9E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.7E-37 T 14-10-2018 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 Gene3D G3DSA:3.40.50.2300 63 321 3.3E-74 T 14-10-2018 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 Gene3D G3DSA:3.40.50.2300 160 326 3.3E-74 T 14-10-2018 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 Gene3D G3DSA:1.10.260.40 1 59 1.3E-20 T 14-10-2018 VEJY3_22606 da0e28cbf6959bc759f5c73d8b65e243 332 SUPERFAMILY SSF47413 1 59 5.25E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Pfam PF00158 Sigma-54 interaction domain 143 308 2.4E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 SMART SM00382 162 304 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 SUPERFAMILY SSF52172 3 186 5.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Gene3D G3DSA:1.10.10.60 432 474 1.1E-8 T 14-10-2018 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 SUPERFAMILY SSF46689 425 478 1.84E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Pfam PF02954 Bacterial regulatory protein, Fis family 437 473 1.5E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Pfam PF00072 Response regulator receiver domain 5 114 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 SUPERFAMILY SSF52540 142 384 5.22E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Gene3D G3DSA:3.40.50.300 133 313 2.2E-62 T 14-10-2018 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Gene3D G3DSA:1.10.8.60 314 394 1.4E-24 T 14-10-2018 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 SMART SM00448 3 114 8.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 Gene3D G3DSA:3.40.50.2300 1 132 8.3E-28 T 14-10-2018 VEJY3_08725 148bd8b5a220e813d0fcdba9b88e83f4 486 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 Gene3D G3DSA:3.40.50.2300 70 323 1.2E-89 T 14-10-2018 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 SUPERFAMILY SSF53822 61 332 2.55E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_18971 46a486468075fba6fdc469363be22e66 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 SMART SM00354 1 72 7.2E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 14-10-2018 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 Gene3D G3DSA:3.40.50.2300 162 291 1.2E-89 T 14-10-2018 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 Pfam PF13377 Periplasmic binding protein-like domain 170 331 9.3E-45 T 14-10-2018 VEJY3_18971 46a486468075fba6fdc469363be22e66 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 Pfam PF00171 Aldehyde dehydrogenase family 16 474 1.1E-177 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.313 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 SUPERFAMILY SSF53720 4 480 3.4E-171 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 Gene3D G3DSA:3.40.605.10 1 249 7.9E-96 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 Gene3D G3DSA:3.40.309.10 250 483 7.1E-83 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_18591 5cec53ab7f15894a840b8954678d8eee 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_05245 dca60c0c7fea9371264dcfd5c8bb35a5 244 Pfam PF03466 LysR substrate binding domain 34 237 1.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_05245 dca60c0c7fea9371264dcfd5c8bb35a5 244 SUPERFAMILY SSF53850 36 240 2.17E-34 T 14-10-2018 VEJY3_05245 dca60c0c7fea9371264dcfd5c8bb35a5 244 Gene3D G3DSA:3.40.190.10 107 211 2.6E-29 T 14-10-2018 VEJY3_05245 dca60c0c7fea9371264dcfd5c8bb35a5 244 Gene3D G3DSA:3.40.190.10 37 230 2.6E-29 T 14-10-2018 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 SUPERFAMILY SSF54292 5 106 8.39E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 5.4E-34 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.1E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 Gene3D G3DSA:1.10.1060.10 107 244 3.0E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 Gene3D G3DSA:3.10.20.30 1 106 4.1E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.5E-95 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14465 0ce4bcb188667f223f4b4b3e0ca7a8c5 248 SUPERFAMILY SSF46548 107 226 2.79E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.181 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 Gene3D G3DSA:3.30.930.10 107 434 2.2E-113 T 14-10-2018 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 SUPERFAMILY SSF55681 118 429 9.21E-98 T 14-10-2018 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PIRSF PIRSF001529 1 435 2.4E-186 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 SUPERFAMILY SSF46589 1 114 2.46E-27 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 8.9E-36 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.7E-28 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEJY3_05430 e0ce4968c9a047ff3bec81a57a003697 435 Gene3D G3DSA:1.10.287.40 1 106 3.5E-20 T 14-10-2018 VEJY3_13165 4f6f60f8aa64d79b5fe5701d282f9d16 163 Gene3D G3DSA:3.90.950.20 1 160 8.6E-58 T 14-10-2018 IPR036653 CinA-like, C-terminal VEJY3_13165 4f6f60f8aa64d79b5fe5701d282f9d16 163 SUPERFAMILY SSF142433 5 159 1.83E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal VEJY3_13165 4f6f60f8aa64d79b5fe5701d282f9d16 163 Pfam PF02464 Competence-damaged protein 6 158 2.9E-57 T 14-10-2018 IPR008136 CinA, C-terminal VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 SUPERFAMILY SSF52540 4 235 3.72E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 SUPERFAMILY SSF52540 259 461 1.24E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 Pfam PF00005 ABC transporter 280 415 2.8E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 SMART SM00382 287 460 8.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 SMART SM00382 29 219 9.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 Gene3D G3DSA:3.40.50.300 261 461 1.7E-45 T 14-10-2018 VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 Gene3D G3DSA:3.40.50.300 2 260 3.3E-56 T 14-10-2018 VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 Pfam PF00005 ABC transporter 20 171 9.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_19336 f8abb9fbb5da4527b4477456ec3fc2b2 461 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 PIRSF PIRSF039085 1 241 2.6E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 Gene3D G3DSA:3.40.50.300 1 242 1.8E-80 T 14-10-2018 VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 SUPERFAMILY SSF52540 1 235 8.75E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 SMART SM00382 26 213 1.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07705 5afcb1e8ad1f526b69d0c717f519c949 242 Pfam PF00005 ABC transporter 17 165 2.8E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_13560 061dd9271403c829e16a5683599e185f 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 2.6E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Gene3D G3DSA:1.10.8.60 309 385 1.2E-25 T 14-10-2018 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 SUPERFAMILY SSF46689 349 486 2.2E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Gene3D G3DSA:3.40.50.2300 1 117 1.1E-9 T 14-10-2018 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 SUPERFAMILY SSF52540 137 378 2.97E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 5.3E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 SMART SM00382 157 301 8.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Pfam PF00158 Sigma-54 interaction domain 137 304 5.6E-74 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Gene3D G3DSA:3.40.50.300 124 308 5.7E-67 T 14-10-2018 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Gene3D G3DSA:1.10.10.60 421 488 1.5E-13 T 14-10-2018 VEJY3_11600 f2d654fa9e9654c5c99dfaad711a4234 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.6E-29 T 14-10-2018 IPR010518 Flagellar regulatory FleQ VEJY3_10860 17dbb2e4683ca4a4d4492c2c83875670 306 SUPERFAMILY SSF161098 89 291 7.52E-21 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10860 17dbb2e4683ca4a4d4492c2c83875670 306 Gene3D G3DSA:1.10.3720.10 85 301 1.6E-22 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10860 17dbb2e4683ca4a4d4492c2c83875670 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.9E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_16871 cfed3737cf8aaae91cb84e7104999983 268 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 209 9.7E-15 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VEJY3_16871 cfed3737cf8aaae91cb84e7104999983 268 Gene3D G3DSA:3.40.720.10 1 251 3.3E-30 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_16871 cfed3737cf8aaae91cb84e7104999983 268 SUPERFAMILY SSF53649 2 253 1.12E-47 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_12010 ca2227b8b9b7ff404b494d72e99f8b81 379 Gene3D G3DSA:3.40.50.2000 174 356 1.7E-5 T 14-10-2018 VEJY3_12010 ca2227b8b9b7ff404b494d72e99f8b81 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.56 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VEJY3_12010 ca2227b8b9b7ff404b494d72e99f8b81 379 SUPERFAMILY SSF53756 6 378 8.24E-30 T 14-10-2018 VEJY3_12010 ca2227b8b9b7ff404b494d72e99f8b81 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 1.8E-133 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VEJY3_19556 0a834b4feb0832cee577078c20329404 135 SUPERFAMILY SSF54534 49 126 3.66E-15 T 14-10-2018 VEJY3_19556 0a834b4feb0832cee577078c20329404 135 PIRSF PIRSF006092 21 127 6.6E-27 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEJY3_19556 0a834b4feb0832cee577078c20329404 135 PIRSF PIRSF006092 1 33 180.0 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEJY3_19556 0a834b4feb0832cee577078c20329404 135 Pfam PF14760 Rnk N-terminus 6 44 2.9E-10 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VEJY3_19556 0a834b4feb0832cee577078c20329404 135 Gene3D G3DSA:3.10.50.30 45 135 7.9E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_19556 0a834b4feb0832cee577078c20329404 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 4.2E-16 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 Pfam PF01467 Cytidylyltransferase-like 5 133 3.5E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.87 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 Gene3D G3DSA:3.40.50.620 1 159 4.3E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_00890 ad325243941ab150289e834a600b10a5 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEJY3_00890 ad325243941ab150289e834a600b10a5 159 SUPERFAMILY SSF52374 1 156 5.09E-46 T 14-10-2018 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 Pfam PF03466 LysR substrate binding domain 117 308 2.8E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 Gene3D G3DSA:3.40.190.10 108 307 4.8E-39 T 14-10-2018 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 Gene3D G3DSA:3.40.190.10 187 283 4.8E-39 T 14-10-2018 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01710 b2c375c337d1ba688944f02957d5eebe 319 SUPERFAMILY SSF53850 106 308 8.51E-37 T 14-10-2018 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 Gene3D G3DSA:3.40.50.2300 1 149 3.8E-56 T 14-10-2018 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 SMART SM00226 2 148 1.5E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.0E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.0E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 2.0E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.0E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 143 3.5E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEJY3_10735 9e7099b7f08b61b990a4e89d53011822 149 SUPERFAMILY SSF52788 1 149 9.68E-46 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.5E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.5E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.5E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.5E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 Gene3D G3DSA:3.20.20.70 1 291 8.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 2.7E-108 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 SMART SM01130 1 290 1.8E-140 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 PIRSF PIRSF001365 1 293 1.2E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.957 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_11695 c25658c2d565695acd2aa537da7b8daa 294 SUPERFAMILY SSF51569 2 288 3.14E-100 T 14-10-2018 VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 SUPERFAMILY SSF56801 13 553 1.57E-148 T 14-10-2018 VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 Gene3D G3DSA:3.30.300.310 458 559 2.4E-29 T 14-10-2018 VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 Gene3D G3DSA:3.40.50.12780 9 457 1.1E-116 T 14-10-2018 VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 Pfam PF00501 AMP-binding enzyme 29 461 3.2E-107 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 7.9E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_03965 7fa334d62c789056d74cfb95107a9041 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_23411 b72d4412d068b9069d9d5a7213db7b6d 393 Gene3D G3DSA:1.20.1250.20 6 198 8.7E-7 T 14-10-2018 VEJY3_23411 b72d4412d068b9069d9d5a7213db7b6d 393 Pfam PF07690 Major Facilitator Superfamily 15 345 1.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_23411 b72d4412d068b9069d9d5a7213db7b6d 393 Gene3D G3DSA:1.20.1250.20 200 386 7.4E-16 T 14-10-2018 VEJY3_23411 b72d4412d068b9069d9d5a7213db7b6d 393 SUPERFAMILY SSF103473 14 378 8.24E-36 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Gene3D G3DSA:3.40.50.300 400 574 5.9E-70 T 14-10-2018 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 ProSitePatterns PS01176 Initiation factor 2 signature. 854 876 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 SUPERFAMILY SSF50447 805 901 1.26E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Pfam PF11987 Translation-initiation factor 2 688 793 1.3E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Gene3D G3DSA:3.30.56.50 2 50 4.9E-23 T 14-10-2018 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 901 17.647 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 SUPERFAMILY SSF46955 3 50 2.38E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Gene3D G3DSA:2.40.30.10 575 693 5.4E-40 T 14-10-2018 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Pfam PF00009 Elongation factor Tu GTP binding domain 407 563 3.5E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 SUPERFAMILY SSF50447 577 658 4.78E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Gene3D G3DSA:2.40.30.10 805 902 1.5E-34 T 14-10-2018 VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.1E-8 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 329 378 5.8E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 SUPERFAMILY SSF52156 681 810 8.11E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 Gene3D G3DSA:3.40.50.10050 698 804 3.7E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VEJY3_12690 1b5ea0376a16194860cb32e1db900338 904 SUPERFAMILY SSF52540 402 568 6.63E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 Pfam PF00271 Helicase conserved C-terminal domain 239 342 5.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 Gene3D G3DSA:3.40.50.300 209 367 3.3E-33 T 14-10-2018 VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 SMART SM00487 1 178 5.1E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 6.4E-23 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 SMART SM00490 265 344 1.4E-10 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 Gene3D G3DSA:3.40.50.300 1 167 3.8E-29 T 14-10-2018 VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 SUPERFAMILY SSF52540 48 362 3.77E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05860 d492650a4f7de4db62060d37d06cec25 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 SUPERFAMILY SSF52317 5 196 3.36E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Gene3D G3DSA:3.40.50.880 6 201 1.5E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 5.0E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Pfam PF02540 NAD synthase 212 284 1.6E-7 T 14-10-2018 IPR022310 NAD/GMP synthase VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.7E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.7E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.7E-6 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.1E-7 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 2.2E-155 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Gene3D G3DSA:3.40.50.620 202 397 1.3E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.532 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 4.5E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 14-10-2018 VEJY3_02825 794fd52ca9d8a2d56706861d13c4fd7a 517 SUPERFAMILY SSF52402 189 412 9.04E-58 T 14-10-2018 VEJY3_15901 cd2b0702ca78c80b1bf6435b444333d0 231 Gene3D G3DSA:2.60.120.10 11 135 4.1E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_15901 cd2b0702ca78c80b1bf6435b444333d0 231 SUPERFAMILY SSF51182 1 225 3.82E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_15901 cd2b0702ca78c80b1bf6435b444333d0 231 PIRSF PIRSF006232 1 229 3.3E-53 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VEJY3_15901 cd2b0702ca78c80b1bf6435b444333d0 231 Gene3D G3DSA:2.60.120.10 7 230 4.1E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_15901 cd2b0702ca78c80b1bf6435b444333d0 231 Pfam PF02678 Pirin 10 119 2.8E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VEJY3_15270 1880d166c3bc54a0990c96850e140ba0 87 SUPERFAMILY SSF160272 1 86 1.83E-29 T 14-10-2018 IPR036692 Shew3726-like superfamily VEJY3_15270 1880d166c3bc54a0990c96850e140ba0 87 Gene3D G3DSA:3.30.160.140 1 87 1.2E-31 T 14-10-2018 IPR036692 Shew3726-like superfamily VEJY3_15270 1880d166c3bc54a0990c96850e140ba0 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 8.9E-25 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 SUPERFAMILY SSF52540 23 261 3.41E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 Gene3D G3DSA:2.40.50.940 243 305 4.1E-11 T 14-10-2018 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 Pfam PF08402 TOBE domain 299 378 8.5E-19 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 SUPERFAMILY SSF50331 257 378 7.65E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 Gene3D G3DSA:3.40.50.300 23 242 9.7E-69 T 14-10-2018 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 Gene3D G3DSA:2.40.50.140 306 358 4.1E-11 T 14-10-2018 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 Pfam PF00005 ABC transporter 40 181 1.4E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_04395 fd66e4ba7041c4d9bbe48ab8fb90d76a 380 SMART SM00382 48 232 2.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_19266 b520fca94e1fb3d4c74c6ee6ed3c25f7 357 PIRSF PIRSF039026 1 357 1.6E-122 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VEJY3_19266 b520fca94e1fb3d4c74c6ee6ed3c25f7 357 Gene3D G3DSA:3.40.190.170 38 338 5.2E-111 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_19266 b520fca94e1fb3d4c74c6ee6ed3c25f7 357 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 319 1.8E-45 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_19266 b520fca94e1fb3d4c74c6ee6ed3c25f7 357 Gene3D G3DSA:3.40.190.10 153 324 5.2E-111 T 14-10-2018 VEJY3_08595 81db875368df2a1f036252d42364d780 491 Pfam PF00083 Sugar (and other) transporter 21 473 3.6E-97 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VEJY3_08595 81db875368df2a1f036252d42364d780 491 Gene3D G3DSA:1.20.1250.20 10 474 1.9E-119 T 14-10-2018 VEJY3_08595 81db875368df2a1f036252d42364d780 491 PRINTS PR00171 Sugar transporter signature 393 405 2.4E-20 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08595 81db875368df2a1f036252d42364d780 491 PRINTS PR00171 Sugar transporter signature 370 391 2.4E-20 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08595 81db875368df2a1f036252d42364d780 491 PRINTS PR00171 Sugar transporter signature 28 38 2.4E-20 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08595 81db875368df2a1f036252d42364d780 491 PRINTS PR00171 Sugar transporter signature 111 130 2.4E-20 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08595 81db875368df2a1f036252d42364d780 491 PRINTS PR00171 Sugar transporter signature 276 286 2.4E-20 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08595 81db875368df2a1f036252d42364d780 491 SUPERFAMILY SSF103473 8 473 9.94E-71 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_08595 81db875368df2a1f036252d42364d780 491 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_08595 81db875368df2a1f036252d42364d780 491 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 337 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_08595 81db875368df2a1f036252d42364d780 491 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 91 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 PIRSF PIRSF039085 1 241 4.4E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 Pfam PF00005 ABC transporter 18 166 2.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 Gene3D G3DSA:3.40.50.300 1 241 4.7E-76 T 14-10-2018 VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 SMART SM00382 27 214 2.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 SUPERFAMILY SSF52540 1 236 2.92E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11100 b425346ff2015ea1c903edd089a49666 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 SMART SM00304 296 350 4.8E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 SMART SM00283 365 626 1.1E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Pfam PF00672 HAMP domain 300 346 1.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Gene3D G3DSA:1.10.287.950 296 628 2.1E-74 T 14-10-2018 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 593 2.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 SUPERFAMILY SSF58104 318 627 4.19E-78 T 14-10-2018 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Gene3D G3DSA:3.30.450.20 66 171 2.4E-25 T 14-10-2018 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Pfam PF02743 Cache domain 38 255 1.7E-22 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 2.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 2.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 2.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20811 1a498e9477cfd596a2f4adf150542f2e 628 Gene3D G3DSA:3.30.450.20 53 268 2.4E-25 T 14-10-2018 VEJY3_00900 2fe3df4c1da288e9cc72efe801552677 355 Gene3D G3DSA:3.40.50.2000 162 349 3.9E-38 T 14-10-2018 VEJY3_00900 2fe3df4c1da288e9cc72efe801552677 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 303 1.8E-47 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VEJY3_00900 2fe3df4c1da288e9cc72efe801552677 355 SUPERFAMILY SSF53756 9 347 6.04E-82 T 14-10-2018 VEJY3_00900 2fe3df4c1da288e9cc72efe801552677 355 Gene3D G3DSA:3.40.50.2000 4 155 2.3E-24 T 14-10-2018 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 14-10-2018 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_14175 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 SUPERFAMILY SSF53383 6 415 2.31E-185 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 PIRSF PIRSF000412 1 416 2.4E-170 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.8E-184 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.349 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 Gene3D G3DSA:3.40.640.10 37 288 4.0E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_03285 dc37cecd9b0eaca9d887819e50011721 416 Gene3D G3DSA:3.90.1150.10 10 396 4.0E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 336 8.2E-114 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 SUPERFAMILY SSF51395 26 333 9.16E-73 T 14-10-2018 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 Pfam PF01070 FMN-dependent dehydrogenase 174 330 2.7E-16 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 5.0E-10 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 SMART SM01240 26 339 0.009 T 14-10-2018 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 PIRSF PIRSF003314 1 339 2.8E-117 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 Gene3D G3DSA:3.20.20.70 3 338 2.0E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_16651 9594cef5b807509fb9f2a4de8db1fe69 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 37.991 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 SUPERFAMILY SSF51735 28 209 3.38E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 SUPERFAMILY SSF48179 348 487 3.23E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Gene3D G3DSA:3.40.50.720 1 208 7.3E-86 T 14-10-2018 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.976 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 SUPERFAMILY SSF48179 210 341 6.46E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Gene3D G3DSA:1.10.1040.10 209 494 8.8E-121 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.2E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 6.2E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEJY3_00165 9a7292812b29345ce7660f828aec45fa 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 6.3E-59 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 SUPERFAMILY SSF51735 9 262 2.37E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 7.4E-47 T 14-10-2018 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 110 130 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 176 199 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 241 260 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 90 107 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 17 34 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 215 234 4.1E-46 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VEJY3_04060 4cac121d84ef8c3e4720ebc5a5fec9d4 263 Gene3D G3DSA:3.40.50.720 1 263 2.2E-68 T 14-10-2018 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.9E-46 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Gene3D G3DSA:1.10.1740.10 312 400 6.8E-28 T 14-10-2018 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 PIRSF PIRSF006205 1 401 1.8E-152 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Gene3D G3DSA:3.40.50.720 1 150 9.0E-53 T 14-10-2018 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.1E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 SUPERFAMILY SSF51735 2 150 6.35E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 4.4E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 SUPERFAMILY SSF55347 126 274 1.18E-62 T 14-10-2018 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 SUPERFAMILY SSF69055 302 399 1.57E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_12045 6e464f2ca13a311697014e727ec0fa94 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.857 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEJY3_11325 46737188527242390308a6c6f3f12149 174 SUPERFAMILY SSF52218 1 173 2.92E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_11325 46737188527242390308a6c6f3f12149 174 Pfam PF03358 NADPH-dependent FMN reductase 1 139 4.5E-26 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEJY3_11325 46737188527242390308a6c6f3f12149 174 Gene3D G3DSA:3.40.50.360 1 174 3.6E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 14-10-2018 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 SUPERFAMILY SSF52540 133 344 2.47E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.452 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 SMART SM00760 376 445 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Gene3D G3DSA:3.40.50.300 118 297 4.0E-49 T 14-10-2018 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Pfam PF11638 DnaA N-terminal domain 4 65 5.2E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Gene3D G3DSA:3.30.300.180 2 114 1.3E-41 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 SMART SM00382 165 378 4.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEJY3_00055 2a1c09964bf63380fa64011f1251d355 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.2E-97 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 SUPERFAMILY SSF50465 332 434 3.84E-30 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 Gene3D G3DSA:2.40.30.10 331 434 1.7E-29 T 14-10-2018 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.797 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 2.1E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 SUPERFAMILY SSF52540 19 236 2.24E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 Gene3D G3DSA:2.40.30.10 242 327 5.3E-27 T 14-10-2018 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 SUPERFAMILY SSF50447 242 324 5.52E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_01460 63e8e7fbcdf8a487cfa4ec863b2b564f 476 Gene3D G3DSA:3.40.50.300 6 239 8.2E-71 T 14-10-2018 VEJY3_12100 475d2bb8b71fb74f6d60c9cd9d8b89af 104 PIRSF PIRSF006257 1 104 1.1E-42 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 VEJY3_12100 475d2bb8b71fb74f6d60c9cd9d8b89af 104 SUPERFAMILY SSF158452 1 103 1.44E-37 T 14-10-2018 IPR036814 YqcC-like superfamily VEJY3_12100 475d2bb8b71fb74f6d60c9cd9d8b89af 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 7.8E-35 T 14-10-2018 IPR023376 YqcC-like domain VEJY3_12100 475d2bb8b71fb74f6d60c9cd9d8b89af 104 Gene3D G3DSA:1.20.1440.40 1 104 1.0E-34 T 14-10-2018 IPR036814 YqcC-like superfamily VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 Gene3D G3DSA:1.10.260.40 1 59 2.3E-21 T 14-10-2018 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 Gene3D G3DSA:3.40.50.2300 159 289 3.1E-71 T 14-10-2018 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 SUPERFAMILY SSF53822 61 331 2.94E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.2E-36 T 14-10-2018 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 Gene3D G3DSA:3.40.50.2300 62 302 3.1E-71 T 14-10-2018 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 SMART SM00354 1 71 1.3E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 SUPERFAMILY SSF47413 1 59 3.84E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22601 0ac1788696e4261b6756d7650f40a480 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 SUPERFAMILY SSF158791 29 134 1.18E-14 T 14-10-2018 VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 SUPERFAMILY SSF161093 276 447 1.83E-46 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 Pfam PF03448 MgtE intracellular N domain 35 135 6.7E-15 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 SUPERFAMILY SSF54631 137 272 1.52E-13 T 14-10-2018 VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 Gene3D G3DSA:3.10.580.10 133 258 3.4E-34 T 14-10-2018 VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 SMART SM00924 34 137 4.4E-15 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 Gene3D G3DSA:1.10.357.20 274 447 2.0E-46 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEJY3_17451 042f4ed83a0620145c629b26449dcbf3 448 Pfam PF01769 Divalent cation transporter 319 440 1.9E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEJY3_03705 bf2c3b92effcedcc816ed121f4460057 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.0E-25 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VEJY3_03705 bf2c3b92effcedcc816ed121f4460057 181 Gene3D G3DSA:3.60.21.10 1 181 3.0E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_03705 bf2c3b92effcedcc816ed121f4460057 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 165 2.5E-29 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VEJY3_03705 bf2c3b92effcedcc816ed121f4460057 181 SUPERFAMILY SSF56300 2 162 5.64E-38 T 14-10-2018 VEJY3_03705 bf2c3b92effcedcc816ed121f4460057 181 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 14-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site VEJY3_18706 2149087aff929dda1911787fed728f75 523 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 70 501 7.8E-114 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 VEJY3_18706 2149087aff929dda1911787fed728f75 523 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 88 95 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_18706 2149087aff929dda1911787fed728f75 523 Gene3D G3DSA:1.20.89.10 321 508 1.7E-180 T 14-10-2018 VEJY3_18706 2149087aff929dda1911787fed728f75 523 Gene3D G3DSA:3.40.50.1980 211 491 1.7E-180 T 14-10-2018 VEJY3_18706 2149087aff929dda1911787fed728f75 523 Pfam PF11844 Domain of unknown function (DUF3364) 1 56 5.2E-23 T 14-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 VEJY3_18706 2149087aff929dda1911787fed728f75 523 SUPERFAMILY SSF53807 6 522 7.85E-165 T 14-10-2018 VEJY3_18706 2149087aff929dda1911787fed728f75 523 Gene3D G3DSA:3.40.50.1980 70 210 1.7E-180 T 14-10-2018 VEJY3_18706 2149087aff929dda1911787fed728f75 523 Gene3D G3DSA:3.40.50.1980 59 484 1.7E-180 T 14-10-2018 VEJY3_18706 2149087aff929dda1911787fed728f75 523 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 151 165 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 SMART SM00922 148 245 2.8E-23 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 Pfam PF13378 Enolase C-terminal domain-like 160 355 6.1E-54 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 Gene3D G3DSA:3.30.390.10 2 124 4.2E-29 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 SUPERFAMILY SSF51604 117 361 6.68E-65 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 Gene3D G3DSA:3.20.20.120 125 353 1.2E-70 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 SUPERFAMILY SSF54826 4 131 3.68E-32 T 14-10-2018 VEJY3_09370 1244deab1fc298d9ea8a5a22a3eb1579 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 129 1.2E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VEJY3_00920 1e910b5807022d7d53feac96dab04b93 235 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 29 230 8.6E-67 T 14-10-2018 VEJY3_00920 1e910b5807022d7d53feac96dab04b93 235 SUPERFAMILY SSF56112 44 195 4.32E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_00920 1e910b5807022d7d53feac96dab04b93 235 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 41.799 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VEJY3_00920 1e910b5807022d7d53feac96dab04b93 235 Gene3D G3DSA:1.10.510.10 140 233 2.4E-15 T 14-10-2018 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 SUPERFAMILY SSF53187 3 401 6.29E-83 T 14-10-2018 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 Gene3D G3DSA:3.30.70.360 189 303 2.2E-130 T 14-10-2018 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 SUPERFAMILY SSF55031 191 304 5.63E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 Gene3D G3DSA:3.40.630.10 16 386 2.2E-130 T 14-10-2018 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 389 6.9E-106 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 Pfam PF07687 Peptidase dimerisation domain 193 289 8.6E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 Pfam PF01546 Peptidase family M20/M25/M40 74 397 2.0E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_17941 674310bd65a444ee6bf355cd44dcf7c9 409 PIRSF PIRSF005962 3 404 8.9E-121 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_17191 76e28e74dcbf633ee3fdd18266c790ed 497 Pfam PF00221 Aromatic amino acid lyase 10 466 2.2E-176 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VEJY3_17191 76e28e74dcbf633ee3fdd18266c790ed 497 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VEJY3_17191 76e28e74dcbf633ee3fdd18266c790ed 497 Gene3D G3DSA:1.20.200.10 197 497 8.0E-106 T 14-10-2018 VEJY3_17191 76e28e74dcbf633ee3fdd18266c790ed 497 Gene3D G3DSA:1.10.275.10 3 196 1.2E-60 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VEJY3_17191 76e28e74dcbf633ee3fdd18266c790ed 497 SUPERFAMILY SSF48557 6 494 1.33E-175 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEJY3_06860 9ca1688a5cfcc088e136bee21b291538 231 Pfam PF00005 ABC transporter 19 160 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06860 9ca1688a5cfcc088e136bee21b291538 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 231 1.3E-101 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE VEJY3_06860 9ca1688a5cfcc088e136bee21b291538 231 SMART SM00382 26 210 2.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06860 9ca1688a5cfcc088e136bee21b291538 231 Gene3D G3DSA:3.40.50.300 1 231 2.2E-59 T 14-10-2018 VEJY3_06860 9ca1688a5cfcc088e136bee21b291538 231 SUPERFAMILY SSF52540 1 220 3.12E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_17906 a601598f9f216867dbe08763489d201f 313 Gene3D G3DSA:2.60.130.10 1 311 6.8E-108 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEJY3_17906 a601598f9f216867dbe08763489d201f 313 SUPERFAMILY SSF49482 3 292 7.98E-94 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEJY3_17906 a601598f9f216867dbe08763489d201f 313 Pfam PF04444 Catechol dioxygenase N terminus 27 96 1.8E-20 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 VEJY3_17906 a601598f9f216867dbe08763489d201f 313 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 136 164 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEJY3_17906 a601598f9f216867dbe08763489d201f 313 Pfam PF00775 Dioxygenase 105 290 1.2E-63 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 Gene3D G3DSA:1.10.287.950 218 547 2.3E-67 T 14-10-2018 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 513 9.6E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 1.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 214 1.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 1.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 SUPERFAMILY SSF58104 239 547 3.79E-67 T 14-10-2018 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 Pfam PF00672 HAMP domain 219 266 5.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 SMART SM00304 218 270 4.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_23341 d6e5e0aacf562dba17ab2eecfad2020d 547 SMART SM00283 285 546 4.9E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 Gene3D G3DSA:3.40.50.300 1 214 2.9E-77 T 14-10-2018 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 Pfam PF00406 Adenylate kinase 5 185 4.8E-59 T 14-10-2018 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 SUPERFAMILY SSF52540 1 186 1.7E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03735 fe35843d76b590557e7e80b92e63e436 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.18 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 SUPERFAMILY SSF56047 2 129 4.58E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 Pfam PF00410 Ribosomal protein S8 5 129 5.3E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1490.10 73 130 3.3E-25 T 14-10-2018 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 14-10-2018 VEJY3_01350 ce7a6130fe6694bc53b8dc869675ec10 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.099 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_11430 bd0ccdefc0b46d340439e5d8aa4ec791 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.115 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VEJY3_11430 bd0ccdefc0b46d340439e5d8aa4ec791 161 SUPERFAMILY SSF82093 30 142 8.5E-39 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VEJY3_11430 bd0ccdefc0b46d340439e5d8aa4ec791 161 Pfam PF03100 CcmE 4 136 4.2E-45 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VEJY3_11430 bd0ccdefc0b46d340439e5d8aa4ec791 161 Gene3D G3DSA:2.40.50.140 30 142 1.3E-39 T 14-10-2018 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 367 1.3E-62 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Gene3D G3DSA:3.40.50.300 98 374 7.3E-104 T 14-10-2018 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 358 367 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 494 35.453 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 SUPERFAMILY SSF52540 99 373 9.45E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 SUPERFAMILY SSF50615 19 94 2.88E-15 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 SUPERFAMILY SSF47917 376 471 2.62E-21 T 14-10-2018 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Gene3D G3DSA:2.40.30.20 7 95 9.5E-15 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Gene3D G3DSA:1.20.150.20 376 479 2.0E-19 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 91 3.7E-4 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21621 cfd323d5fb2e5f50f5b551addf764e51 498 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 374 469 7.7E-19 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_09670 a417a3755fce1e39cd9fe2f77a8c3df3 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 2.8E-10 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.7E-43 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 3.7E-41 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 SUPERFAMILY SSF109998 248 429 7.85E-50 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 SUPERFAMILY SSF54534 90 241 1.24E-36 T 14-10-2018 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Gene3D G3DSA:3.30.70.1050 1 115 3.3E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 SUPERFAMILY SSF102735 1 131 1.96E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 PIRSF PIRSF003095 1 434 1.1E-129 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Gene3D G3DSA:3.10.50.40 150 246 4.8E-109 T 14-10-2018 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.0E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.125 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VEJY3_04200 edb44697a8e1f605d0e1a884d4719066 434 Gene3D G3DSA:1.10.3120.10 116 417 4.8E-109 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 SUPERFAMILY SSF52540 154 384 1.13E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Gene3D G3DSA:3.40.50.2300 17 134 1.7E-30 T 14-10-2018 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 SMART SM00448 16 127 1.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 SUPERFAMILY SSF46689 426 475 3.85E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Pfam PF00158 Sigma-54 interaction domain 155 321 5.2E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Gene3D G3DSA:1.10.10.60 427 473 2.3E-14 T 14-10-2018 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Gene3D G3DSA:3.40.50.300 140 324 2.2E-65 T 14-10-2018 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.2E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Gene3D G3DSA:1.10.8.60 325 389 3.8E-17 T 14-10-2018 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 7.2E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 7.2E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 Pfam PF00072 Response regulator receiver domain 18 127 3.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 SMART SM00382 175 321 8.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07180 26916ad36e516bfaca912507b1edbf7b 483 SUPERFAMILY SSF52172 16 199 2.85E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_21236 847059fb29fce3ef599c10313bcd2867 149 Gene3D G3DSA:2.40.128.640 44 148 3.2E-22 T 14-10-2018 VEJY3_21236 847059fb29fce3ef599c10313bcd2867 149 Pfam PF04170 NlpE N-terminal domain 57 132 1.1E-13 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Pfam PF06251 Capsule biosynthesis GfcC 665 865 4.2E-10 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Pfam PF02563 Polysaccharide biosynthesis/export protein 118 180 1.2E-13 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.10.560.10 201 277 2.5E-19 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.10.560.10 544 644 3.5E-12 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.10.560.10 785 863 4.3E-11 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.10.560.10 279 359 2.2E-12 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.10.560.10 360 451 4.5E-8 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 SUPERFAMILY SSF142984 281 317 6.93E-6 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 SUPERFAMILY SSF142984 654 690 9.42E-5 T 14-10-2018 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Pfam PF10531 SLBB domain 199 247 3.4E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Pfam PF10531 SLBB domain 560 601 2.6E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Pfam PF10531 SLBB domain 282 325 3.4E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_00985 b50bdc8b6f41a6eb944d4337cca4324f 892 Gene3D G3DSA:3.30.1950.10 139 195 2.5E-19 T 14-10-2018 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 Pfam PF01238 Phosphomannose isomerase type I 2 357 2.2E-83 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 Gene3D G3DSA:2.60.120.10 7 282 2.2E-124 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PIRSF PIRSF001480 1 394 9.2E-103 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 SUPERFAMILY SSF51182 2 376 7.36E-92 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 262 287 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 Gene3D G3DSA:1.10.441.10 150 307 2.2E-124 T 14-10-2018 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 5 23 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 262 281 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 33 48 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 227 242 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 243 262 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 PRINTS PR00714 Phosphomannose isomerase type I signature 281 300 2.7E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01055 91997bd57c59920a5fdc637159af5c23 394 Gene3D G3DSA:2.60.120.10 308 386 2.2E-124 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_12240 33d9b72d3c832cb794ad09fdd21c9e7f 102 Gene3D G3DSA:3.30.300.90 1 89 5.4E-34 T 14-10-2018 VEJY3_12240 33d9b72d3c832cb794ad09fdd21c9e7f 102 PIRSF PIRSF003113 1 99 6.3E-36 T 14-10-2018 IPR002634 BolA protein VEJY3_12240 33d9b72d3c832cb794ad09fdd21c9e7f 102 Pfam PF01722 BolA-like protein 10 83 1.5E-29 T 14-10-2018 IPR002634 BolA protein VEJY3_12240 33d9b72d3c832cb794ad09fdd21c9e7f 102 SUPERFAMILY SSF82657 1 88 6.28E-31 T 14-10-2018 IPR036065 BolA-like superfamily VEJY3_09505 a596ed6577c8fc7bdc495fc8cfcfdd13 96 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 17 60 1.1E-12 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VEJY3_11300 06db391d26c2120064907ee9279cd67e 639 SUPERFAMILY SSF53850 85 612 2.35E-74 T 14-10-2018 VEJY3_11300 06db391d26c2120064907ee9279cd67e 639 Gene3D G3DSA:3.40.190.10 78 337 4.9E-39 T 14-10-2018 VEJY3_11300 06db391d26c2120064907ee9279cd67e 639 Gene3D G3DSA:3.10.105.10 350 599 2.2E-39 T 14-10-2018 VEJY3_11300 06db391d26c2120064907ee9279cd67e 639 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 509 1.5E-64 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_11300 06db391d26c2120064907ee9279cd67e 639 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 130 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Gene3D G3DSA:1.20.1330.10 209 327 2.5E-13 T 14-10-2018 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Gene3D G3DSA:1.20.58.1830 8 33 1.1E-55 T 14-10-2018 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Gene3D G3DSA:1.20.1330.10 45 175 1.1E-55 T 14-10-2018 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 PRINTS PR00207 Flagellin signature 37 54 1.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 PRINTS PR00207 Flagellin signature 111 134 1.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 PRINTS PR00207 Flagellin signature 76 95 1.5E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 9.8E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Pfam PF07196 Flagellin hook IN motif 203 244 2.0E-5 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Gene3D G3DSA:1.10.8.410 328 376 1.0E-15 T 14-10-2018 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 SUPERFAMILY SSF64518 4 375 6.41E-77 T 14-10-2018 VEJY3_01810 03d35524ba4a25f9ad5f1971cd60e7fc 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.2E-20 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 Gene3D G3DSA:3.30.70.100 474 566 2.6E-26 T 14-10-2018 VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 Pfam PF00924 Mechanosensitive ion channel 371 562 7.1E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 Gene3D G3DSA:2.30.30.60 423 471 2.8E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 SUPERFAMILY SSF50182 407 473 2.35E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 SUPERFAMILY SSF82861 320 406 5.49E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_11185 2c25f513794de3fb7f272496e85b5836 579 SUPERFAMILY SSF82689 476 572 1.57E-31 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_21606 8cf0d8465e1492e689ebfc6736065dd2 235 Gene3D G3DSA:3.60.21.10 2 227 6.9E-9 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_21606 8cf0d8465e1492e689ebfc6736065dd2 235 SUPERFAMILY SSF56300 7 220 4.56E-19 T 14-10-2018 VEJY3_21606 8cf0d8465e1492e689ebfc6736065dd2 235 Pfam PF00149 Calcineurin-like phosphoesterase 5 197 9.6E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 SMART SM00448 2 111 4.2E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 Gene3D G3DSA:3.40.50.2300 1 127 9.7E-38 T 14-10-2018 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 SUPERFAMILY SSF46894 125 226 3.97E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 Gene3D G3DSA:1.10.10.10 128 229 8.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 SMART SM00862 148 225 6.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 3.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14535 4c44489d2a6c2050301fb1cf5e1c9b9b 229 SUPERFAMILY SSF52172 1 123 1.99E-39 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 SUPERFAMILY SSF55073 313 465 6.28E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 Pfam PF00990 Diguanylate cyclase, GGDEF domain 308 465 6.7E-42 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 Pfam PF03924 CHASE domain 123 234 9.9E-18 T 14-10-2018 IPR006189 CHASE domain VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 Gene3D G3DSA:3.30.70.270 304 472 5.3E-50 T 14-10-2018 VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 SMART SM01079 61 237 2.4E-35 T 14-10-2018 IPR006189 CHASE domain VEJY3_16416 a12e2c4f58d95bdcc8f3f16f1aa36f82 474 SMART SM00267 297 471 4.9E-49 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 Gene3D G3DSA:1.10.760.10 109 205 2.0E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 SUPERFAMILY SSF46626 6 106 4.01E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 SUPERFAMILY SSF46626 114 203 3.05E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 Gene3D G3DSA:1.10.760.10 19 108 1.8E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 PIRSF PIRSF000005 1 205 7.2E-66 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 Pfam PF00034 Cytochrome c 116 201 3.5E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_00500 1b688858d8a83601cd838597b561bb5b 205 Pfam PF00034 Cytochrome c 25 104 2.2E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_05750 acf33adf5800e938cd81a79701ef0a24 189 Gene3D G3DSA:1.10.340.30 5 189 8.4E-76 T 14-10-2018 VEJY3_05750 acf33adf5800e938cd81a79701ef0a24 189 SUPERFAMILY SSF48150 6 185 5.89E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEJY3_05750 acf33adf5800e938cd81a79701ef0a24 189 Pfam PF03352 Methyladenine glycosylase 9 184 3.6E-72 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 4.0E-24 T 14-10-2018 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 Pfam PF13624 SurA N-terminal domain 1 166 4.4E-51 T 14-10-2018 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 SUPERFAMILY SSF109998 39 244 8.37E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 SUPERFAMILY SSF54534 225 361 1.24E-29 T 14-10-2018 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 Gene3D G3DSA:3.10.50.40 269 363 2.4E-32 T 14-10-2018 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 Gene3D G3DSA:1.10.4030.30 242 383 2.4E-32 T 14-10-2018 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VEJY3_04225 84e28e7ab12798a2e5dff630ed0ac5be 619 Gene3D G3DSA:1.10.4030.30 42 175 2.2E-15 T 14-10-2018 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 Gene3D G3DSA:3.40.50.2300 1 127 1.3E-32 T 14-10-2018 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 SUPERFAMILY SSF46894 133 234 1.39E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 SUPERFAMILY SSF52172 2 125 1.85E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 Pfam PF00072 Response regulator receiver domain 5 113 2.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 Gene3D G3DSA:1.10.10.10 128 236 3.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 SMART SM00862 157 233 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_04795 32ba2b2607e425e8d56157bf21560d1b 236 SMART SM00448 3 113 2.1E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Pfam PF00571 CBS domain 223 276 0.0047 T 14-10-2018 IPR000644 CBS domain VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 SUPERFAMILY SSF54631 144 276 3.03E-17 T 14-10-2018 VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 9.0E-40 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Gene3D G3DSA:3.10.580.10 140 288 6.1E-18 T 14-10-2018 VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 8.1E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 SUPERFAMILY SSF51206 8 130 4.98E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 SMART SM00116 230 277 1.3 T 14-10-2018 IPR000644 CBS domain VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 SMART SM00116 155 213 14.0 T 14-10-2018 IPR000644 CBS domain VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 1.0E-41 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEJY3_14610 76c891464fa1fd36d95b1ddb45b10168 608 Gene3D G3DSA:2.60.120.10 5 139 7.0E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 398 38.155 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 SMART SM00864 13 205 2.4E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 Gene3D G3DSA:3.40.50.1440 5 220 2.7E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 SUPERFAMILY SSF55307 204 320 7.33E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 SUPERFAMILY SSF52490 13 208 1.05E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 3.2E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEJY3_02100 594e104f1b0ede764a0ee32d4de4bb58 411 SMART SM00865 207 325 2.9E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VEJY3_10120 5cab292edd676b7a3fd9ae0d7a5073e4 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 9 215 38.396 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_10120 5cab292edd676b7a3fd9ae0d7a5073e4 215 SUPERFAMILY SSF142695 36 189 7.59E-55 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_10120 5cab292edd676b7a3fd9ae0d7a5073e4 215 Gene3D G3DSA:3.40.50.10990 21 191 2.1E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_10120 5cab292edd676b7a3fd9ae0d7a5073e4 215 Pfam PF00925 GTP cyclohydrolase II 36 188 4.8E-60 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 Gene3D G3DSA:3.30.420.370 142 211 1.1E-83 T 14-10-2018 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 Gene3D G3DSA:3.30.420.380 3 233 1.1E-83 T 14-10-2018 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 Pfam PF05134 Type II secretion system (T2SS), protein L 5 236 5.3E-78 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 Pfam PF12693 GspL periplasmic domain 240 398 2.3E-52 T 14-10-2018 IPR025691 GspL periplasmic domain VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 SUPERFAMILY SSF53067 2 144 1.17E-39 T 14-10-2018 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 Gene3D G3DSA:3.30.1360.100 313 399 4.8E-31 T 14-10-2018 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 PIRSF PIRSF015761 11 398 4.8E-38 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VEJY3_00650 c58166c376ca55fae9b16e6972922977 399 SUPERFAMILY SSF53067 146 234 1.29E-22 T 14-10-2018 VEJY3_04155 02e3a85132e79c5877b7fa793165e45b 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 8.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04155 02e3a85132e79c5877b7fa793165e45b 285 Gene3D G3DSA:1.10.3720.10 2 276 5.9E-54 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04155 02e3a85132e79c5877b7fa793165e45b 285 SUPERFAMILY SSF161098 8 285 1.03E-65 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 SUPERFAMILY SSF48557 4 455 4.4E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Gene3D G3DSA:1.10.275.10 6 133 6.0E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 8.2E-7 T 14-10-2018 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 8.2E-7 T 14-10-2018 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 8.2E-7 T 14-10-2018 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Gene3D G3DSA:1.10.40.30 403 454 2.8E-18 T 14-10-2018 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Gene3D G3DSA:1.20.200.10 134 400 1.3E-96 T 14-10-2018 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Pfam PF00206 Lyase 13 337 3.1E-94 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 8.9E-32 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 8.9E-32 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 8.9E-32 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 8.9E-32 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 75.412 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_14595 7ae1d0669a8e7f8e6884c01e2998be6c 461 Pfam PF10415 Fumarase C C-terminus 403 455 5.8E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Gene3D G3DSA:1.20.200.10 108 446 1.5E-146 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 SUPERFAMILY SSF48557 3 456 2.51E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 571 1.7E-8 T 14-10-2018 IPR000182 GNAT domain VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Gene3D G3DSA:1.10.275.10 1 107 3.6E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Pfam PF00206 Lyase 6 301 1.4E-87 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Gene3D G3DSA:1.10.40.30 363 433 1.5E-146 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.6E-67 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 SUPERFAMILY SSF55729 466 585 4.01E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Gene3D G3DSA:3.40.630.30 463 604 7.2E-26 T 14-10-2018 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.08 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.8E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14090 f7745061075eb349d05771b643b210c9 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 Gene3D G3DSA:3.20.20.70 1 242 4.2E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 Pfam PF01207 Dihydrouridine synthase (Dus) 5 292 1.5E-78 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 PIRSF PIRSF006621 1 322 6.9E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 Gene3D G3DSA:1.20.225.30 243 314 2.3E-26 T 14-10-2018 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 SUPERFAMILY SSF51395 1 313 6.96E-74 T 14-10-2018 VEJY3_10790 435ac40c056ac8fb650dd7ce841c99cb 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.866 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 SUPERFAMILY SSF50685 88 177 1.64E-11 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 SUPERFAMILY SSF110997 190 263 9.29E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 177 25.23 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 Pfam PF03330 Lytic transglycolase 84 174 3.0E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 Gene3D G3DSA:2.40.40.10 84 178 2.6E-39 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 Pfam PF05036 Sporulation related domain 192 261 7.5E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_03310 21e3d7213a5395b9bb4b92f888ce6600 268 Gene3D G3DSA:3.30.70.1070 193 264 1.3E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 Gene3D G3DSA:3.40.440.10 6 255 1.6E-72 T 14-10-2018 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 Gene3D G3DSA:3.90.170.10 266 418 1.0E-49 T 14-10-2018 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 SUPERFAMILY SSF52540 1 417 1.49E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 5.6E-130 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.886 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 SMART SM00788 3 417 4.3E-174 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_16951 d53710f492016ca4484fc2ce6791a697 418 Gene3D G3DSA:1.10.300.10 99 200 1.6E-72 T 14-10-2018 VEJY3_18546 845685f8a4897e1361bf55c52b7f4669 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEJY3_18546 845685f8a4897e1361bf55c52b7f4669 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18546 845685f8a4897e1361bf55c52b7f4669 128 Gene3D G3DSA:1.10.1660.10 1 123 1.1E-27 T 14-10-2018 VEJY3_18546 845685f8a4897e1361bf55c52b7f4669 128 SUPERFAMILY SSF46955 4 117 3.15E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_18546 845685f8a4897e1361bf55c52b7f4669 128 SMART SM00422 4 71 1.5E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_13205 a72878df43ff4b26ee432caab528eadd 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEJY3_13205 a72878df43ff4b26ee432caab528eadd 235 Gene3D G3DSA:3.90.550.10 4 233 7.7E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_13205 a72878df43ff4b26ee432caab528eadd 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 3.0E-76 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEJY3_13205 a72878df43ff4b26ee432caab528eadd 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 42.266 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEJY3_13205 a72878df43ff4b26ee432caab528eadd 235 SUPERFAMILY SSF53448 9 230 9.81E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 SUPERFAMILY SSF55048 128 197 1.83E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.3E-43 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 Gene3D G3DSA:3.30.70.250 125 197 5.9E-108 T 14-10-2018 VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 SUPERFAMILY SSF52151 4 305 5.23E-81 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 9.4E-127 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 Pfam PF00698 Acyl transferase domain 7 290 5.0E-38 T 14-10-2018 IPR014043 Acyl transferase VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 Gene3D G3DSA:3.40.366.10 7 286 5.9E-108 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VEJY3_10690 66d745c3bed6d6fb0b82e95c5171e87b 307 PIRSF PIRSF000446 1 307 9.1E-136 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Gene3D G3DSA:3.30.565.10 278 438 2.6E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SMART SM00387 326 437 1.3E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SMART SM00388 214 279 3.6E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SMART SM00448 456 569 8.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 4.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 4.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 4.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SUPERFAMILY SSF52172 456 574 1.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SUPERFAMILY SSF47384 199 280 3.92E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Gene3D G3DSA:1.10.287.130 180 277 2.4E-26 T 14-10-2018 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Gene3D G3DSA:3.40.50.2300 439 573 2.5E-39 T 14-10-2018 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 1.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 SUPERFAMILY SSF55874 268 435 4.32E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Pfam PF00072 Response regulator receiver domain 459 570 1.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07385 73ed6aa6c5945b10d025fd70def03da0 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 5.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_05845 615861492570de66db094f9fd2620d8f 449 Gene3D G3DSA:1.10.287.130 188 292 1.1E-7 T 14-10-2018 VEJY3_05845 615861492570de66db094f9fd2620d8f 449 SUPERFAMILY SSF47384 224 289 2.35E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_05845 615861492570de66db094f9fd2620d8f 449 SMART SM00387 342 448 1.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_05845 615861492570de66db094f9fd2620d8f 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 445 9.3E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_05845 615861492570de66db094f9fd2620d8f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 8.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05845 615861492570de66db094f9fd2620d8f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 8.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05845 615861492570de66db094f9fd2620d8f 449 Gene3D G3DSA:3.30.565.10 309 448 1.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_05845 615861492570de66db094f9fd2620d8f 449 SUPERFAMILY SSF55874 309 444 2.23E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Pfam PF13188 PAS domain 18 61 1.4E-5 T 14-10-2018 IPR000014 PAS domain VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 SMART SM00387 231 337 3.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Gene3D G3DSA:1.10.287.130 126 187 5.2E-7 T 14-10-2018 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 SUPERFAMILY SSF55874 177 335 1.96E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 SUPERFAMILY SSF47384 117 188 5.89E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 SUPERFAMILY SSF55785 18 85 5.58E-6 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Gene3D G3DSA:3.30.450.20 7 125 5.9E-6 T 14-10-2018 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 SMART SM00388 122 188 1.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Gene3D G3DSA:3.30.565.10 190 342 6.2E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 3.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 5.7E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11595 eae47e0dc984e945385caa0bd55c356e 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 3.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 Gene3D G3DSA:3.20.20.100 1 266 1.5E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 Pfam PF00248 Aldo/keto reductase family 11 249 1.5E-48 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 SUPERFAMILY SSF51430 2 256 1.26E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 112 129 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.0E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PRINTS PR00069 Aldo-keto reductase signature 112 129 1.0E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.0E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PRINTS PR00069 Aldo-keto reductase signature 184 208 1.0E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PRINTS PR00069 Aldo-keto reductase signature 147 176 1.0E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PIRSF PIRSF000097 100 264 8.1E-33 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_09060 29c2175c5efea30b09557bca62f539d7 266 PIRSF PIRSF000097 1 111 9.5E-33 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Pfam PF14501 GHKL domain 417 510 3.1E-10 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 SMART SM00387 415 523 6.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 SUPERFAMILY SSF55785 207 305 7.95E-5 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Gene3D G3DSA:3.30.450.20 33 164 1.0E-35 T 14-10-2018 VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 SUPERFAMILY SSF55874 418 520 7.07E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 317 368 6.2E-10 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 SUPERFAMILY SSF55890 319 403 4.45E-11 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Gene3D G3DSA:3.30.450.20 200 309 3.1E-11 T 14-10-2018 VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Gene3D G3DSA:3.30.565.10 368 520 1.4E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 Pfam PF17203 Single cache domain 3 40 163 1.7E-19 T 14-10-2018 IPR033463 Single cache domain 3 VEJY3_19211 7a212bcd09d1b081f460f6f337bec64f 524 SUPERFAMILY SSF103190 39 163 5.89E-31 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_01650 fa648398451b15e9a5c689cc571bda68 332 Gene3D G3DSA:3.40.718.10 1 332 1.3E-121 T 14-10-2018 VEJY3_01650 fa648398451b15e9a5c689cc571bda68 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.142 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VEJY3_01650 fa648398451b15e9a5c689cc571bda68 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 1.6E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VEJY3_01650 fa648398451b15e9a5c689cc571bda68 332 SUPERFAMILY SSF53659 7 330 1.15E-109 T 14-10-2018 VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 Gene3D G3DSA:3.40.50.1000 3 263 1.7E-78 T 14-10-2018 IPR023214 HAD superfamily VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 5.0E-65 T 14-10-2018 VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 Gene3D G3DSA:3.30.1240.10 86 191 1.7E-78 T 14-10-2018 VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 VEJY3_07775 9ee1028eb7207063478450279bf7c170 269 SUPERFAMILY SSF56784 1 267 2.23E-73 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 SUPERFAMILY SSF103190 88 200 5.89E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 515 4.5E-46 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 SMART SM00267 349 518 1.1E-53 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 Gene3D G3DSA:3.30.70.270 348 517 8.5E-50 T 14-10-2018 VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 SUPERFAMILY SSF55073 365 517 1.33E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 Pfam PF14827 Double sensory domain of two-component sensor kinase 96 312 6.3E-14 T 14-10-2018 IPR029150 Double Cache domain 3 VEJY3_22991 1356e61833ae7e8f6426f03124229596 522 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 514 3.4E-42 T 14-10-2018 IPR000160 GGDEF domain VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 SUPERFAMILY SSF56712 3 612 2.62E-184 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 SMART SM00437 284 563 4.0E-90 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Gene3D G3DSA:1.10.290.10 293 422 2.3E-166 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Pfam PF01751 Toprim domain 4 130 1.4E-16 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 SMART SM00436 129 224 8.7E-30 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Pfam PF01131 DNA topoisomerase 159 598 2.6E-116 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 646 64.541 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Gene3D G3DSA:1.10.460.10 163 606 2.3E-166 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 SMART SM00493 2 125 3.8E-29 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Gene3D G3DSA:2.70.20.10 218 493 2.3E-166 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VEJY3_11115 997bf514d54c3e98905a8b1c124af67c 654 Gene3D G3DSA:3.40.50.140 2 157 9.3E-61 T 14-10-2018 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 SUPERFAMILY SSF102114 123 374 9.68E-62 T 14-10-2018 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Gene3D G3DSA:3.80.30.20 145 378 9.8E-84 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Gene3D G3DSA:3.40.50.12160 3 138 2.0E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 SMART SM00729 147 367 4.8E-63 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Pfam PF01938 TRAM domain 379 440 4.2E-17 T 14-10-2018 IPR002792 TRAM domain VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Pfam PF04055 Radical SAM superfamily 151 325 3.8E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VEJY3_03375 1faa011ec1e2c54f1c5425def38acff5 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.911 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VEJY3_15981 b5878c7585007f954bc66702364e2292 559 SUPERFAMILY SSF55120 350 556 1.92E-57 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_15981 b5878c7585007f954bc66702364e2292 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_15981 b5878c7585007f954bc66702364e2292 559 Gene3D G3DSA:3.30.2350.10 347 559 1.1E-61 T 14-10-2018 VEJY3_15981 b5878c7585007f954bc66702364e2292 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 5.1E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 SMART SM00382 42 186 5.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05550 15956feed1ab2430169878a92f65c155 317 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 232 241 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_05550 15956feed1ab2430169878a92f65c155 317 Gene3D G3DSA:1.10.8.60 193 256 5.6E-21 T 14-10-2018 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 316 1.2E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 279 296 1.2E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 Pfam PF02954 Bacterial regulatory protein, Fis family 273 313 6.7E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 SUPERFAMILY SSF46689 232 315 3.14E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 Pfam PF00158 Sigma-54 interaction domain 22 188 1.2E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 Gene3D G3DSA:3.40.50.300 12 192 2.3E-61 T 14-10-2018 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 108 123 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_05550 15956feed1ab2430169878a92f65c155 317 SUPERFAMILY SSF52540 22 260 2.0E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05550 15956feed1ab2430169878a92f65c155 317 Gene3D G3DSA:1.10.10.60 265 317 2.2E-14 T 14-10-2018 VEJY3_18041 d0ae1d6cbf403c54ce8e6197859d33dd 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 122 3.6E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_18041 d0ae1d6cbf403c54ce8e6197859d33dd 315 SUPERFAMILY SSF51735 2 142 6.06E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18041 d0ae1d6cbf403c54ce8e6197859d33dd 315 SUPERFAMILY SSF55347 127 286 1.83E-12 T 14-10-2018 VEJY3_18041 d0ae1d6cbf403c54ce8e6197859d33dd 315 Gene3D G3DSA:3.40.50.720 2 295 2.2E-52 T 14-10-2018 VEJY3_18041 d0ae1d6cbf403c54ce8e6197859d33dd 315 Gene3D G3DSA:3.30.360.10 123 306 2.2E-52 T 14-10-2018 VEJY3_00940 5b2e0fb9b31e632e197e23ccc631dffa 416 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 4.8E-61 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VEJY3_00940 5b2e0fb9b31e632e197e23ccc631dffa 416 Gene3D G3DSA:3.40.50.2000 217 404 7.4E-61 T 14-10-2018 VEJY3_00940 5b2e0fb9b31e632e197e23ccc631dffa 416 SUPERFAMILY SSF53756 53 395 3.95E-14 T 14-10-2018 VEJY3_00940 5b2e0fb9b31e632e197e23ccc631dffa 416 Gene3D G3DSA:3.40.50.11720 34 210 1.7E-47 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VEJY3_00940 5b2e0fb9b31e632e197e23ccc631dffa 416 Pfam PF00534 Glycosyl transferases group 1 248 391 4.2E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 SUPERFAMILY SSF52172 1 118 1.57E-35 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 SUPERFAMILY SSF46894 118 217 3.4E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 Gene3D G3DSA:1.10.10.10 122 218 7.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 SMART SM00862 145 216 1.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 SMART SM00448 1 112 1.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 Pfam PF00072 Response regulator receiver domain 4 112 5.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 Gene3D G3DSA:3.40.50.2300 1 121 9.0E-37 T 14-10-2018 VEJY3_08035 180775e2e5c1d6f46c9b63d891eda3cb 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 2.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_23146 16e927598a273b0d3764c14ac342c173 343 SUPERFAMILY SSF53756 10 314 7.33E-36 T 14-10-2018 VEJY3_23146 16e927598a273b0d3764c14ac342c173 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 158 1.3E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_23146 16e927598a273b0d3764c14ac342c173 343 Pfam PF13692 Glycosyl transferases group 1 182 311 2.6E-15 T 14-10-2018 VEJY3_23146 16e927598a273b0d3764c14ac342c173 343 Gene3D G3DSA:3.40.50.2000 171 316 2.1E-17 T 14-10-2018 VEJY3_23146 16e927598a273b0d3764c14ac342c173 343 Gene3D G3DSA:3.40.50.2000 2 170 5.7E-10 T 14-10-2018 VEJY3_12355 e186f088bf0d17afe08e6fe670a4d5f6 324 Pfam PF03595 Voltage-dependent anion channel 19 306 1.2E-32 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VEJY3_12355 e186f088bf0d17afe08e6fe670a4d5f6 324 Gene3D G3DSA:1.50.10.150 5 318 3.8E-46 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Gene3D G3DSA:3.90.1170.50 20 144 6.1E-259 T 14-10-2018 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Gene3D G3DSA:3.30.365.10 145 777 6.1E-259 T 14-10-2018 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 SMART SM01008 35 143 2.2E-29 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Gene3D G3DSA:3.30.365.10 462 612 6.1E-259 T 14-10-2018 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 170 710 9.3E-186 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 35 141 4.7E-25 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 SUPERFAMILY SSF56003 170 779 3.93E-180 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Gene3D G3DSA:3.30.365.10 158 409 6.1E-259 T 14-10-2018 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 Gene3D G3DSA:3.30.365.10 191 285 6.1E-259 T 14-10-2018 VEJY3_17081 aaa2f534ceeb65bbae2e92954773c5a3 798 SUPERFAMILY SSF54665 11 141 3.53E-35 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily VEJY3_01565 026f6bf455836344d0dfed93f09924f0 234 Gene3D G3DSA:3.40.50.300 1 233 6.9E-60 T 14-10-2018 VEJY3_01565 026f6bf455836344d0dfed93f09924f0 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_01565 026f6bf455836344d0dfed93f09924f0 234 SUPERFAMILY SSF52540 1 230 5.89E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01565 026f6bf455836344d0dfed93f09924f0 234 SMART SM00382 24 209 3.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_01565 026f6bf455836344d0dfed93f09924f0 234 Pfam PF00005 ABC transporter 18 157 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24311 26030be85e291feed835f550179043ae 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.7E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_24311 26030be85e291feed835f550179043ae 211 Gene3D G3DSA:2.30.110.10 13 211 1.3E-75 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_24311 26030be85e291feed835f550179043ae 211 SUPERFAMILY SSF50475 11 211 6.17E-64 T 14-10-2018 VEJY3_24311 26030be85e291feed835f550179043ae 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_24311 26030be85e291feed835f550179043ae 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.51 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_24311 26030be85e291feed835f550179043ae 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 3.4E-22 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_24311 26030be85e291feed835f550179043ae 211 PIRSF PIRSF000190 1 211 9.3E-81 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 Gene3D G3DSA:1.20.1560.10 141 454 8.9E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 Pfam PF00664 ABC transporter transmembrane region 158 417 3.3E-23 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 SUPERFAMILY SSF52540 459 693 2.33E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 Gene3D G3DSA:3.40.50.300 461 703 4.2E-76 T 14-10-2018 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 Pfam PF00005 ABC transporter 487 635 3.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 SUPERFAMILY SSF90123 142 452 7.46E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 SMART SM00382 495 681 3.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24341 79287ad44e51aa11165faa9004cd5282 704 Gene3D G3DSA:3.90.70.10 1 126 5.2E-36 T 14-10-2018 VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.3E-12 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 Pfam PF00665 Integrase core domain 167 269 2.8E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 SUPERFAMILY SSF46689 2 113 1.43E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 SUPERFAMILY SSF53098 165 311 1.64E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 Gene3D G3DSA:3.30.420.10 166 313 1.4E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_09100 1cf7508129b7aed8900f14e047865027 315 Gene3D G3DSA:1.10.10.60 9 44 3.2E-7 T 14-10-2018 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.5E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.695 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 5.8E-132 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 Gene3D G3DSA:3.40.1500.10 1 305 1.7E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 PIRSF PIRSF000166 2 305 1.2E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 SUPERFAMILY SSF102886 5 305 3.14E-138 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_15280 db524ac041814a8c1cd25b1aa5e7e6eb 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.3E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 SUPERFAMILY SSF55811 218 353 1.76E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 1.4E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 3.7E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Pfam PF14815 NUDIX domain 242 351 2.1E-21 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Gene3D G3DSA:1.10.1670.10 7 209 6.9E-88 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Gene3D G3DSA:1.10.340.30 19 130 6.9E-88 T 14-10-2018 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 SMART SM00525 189 209 1.2E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Pfam PF00633 Helix-hairpin-helix motif 97 125 2.2E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 Gene3D G3DSA:3.90.79.10 223 356 2.2E-16 T 14-10-2018 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 SUPERFAMILY SSF48150 3 223 1.07E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEJY3_13510 a90808d1ad4227d54324e82f9c78d42b 358 SMART SM00478 37 188 2.0E-46 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SMART SM00487 25 221 1.1E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Pfam PF16124 RecQ zinc-binding 346 407 5.7E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SUPERFAMILY SSF52540 17 202 7.32E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SUPERFAMILY SSF52540 211 458 7.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Pfam PF09382 RQC domain 409 517 2.4E-36 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 4.8E-20 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Gene3D G3DSA:3.40.50.300 213 408 6.6E-60 T 14-10-2018 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SMART SM00490 253 334 8.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SMART SM00956 414 517 1.7E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Gene3D G3DSA:3.40.50.300 8 211 1.2E-82 T 14-10-2018 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Gene3D G3DSA:1.10.10.10 409 518 6.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 SMART SM00341 533 611 2.1E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 14-10-2018 VEJY3_15150 5919774d5acdfaa86635ffbea2ee098c 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 8.8E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_19451 9e2d4231c0bbc242738fef819d9ae045 126 Pfam PF00031 Cystatin domain 51 98 2.6E-6 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 VEJY3_19451 9e2d4231c0bbc242738fef819d9ae045 126 SUPERFAMILY SSF54403 42 114 2.34E-13 T 14-10-2018 VEJY3_19451 9e2d4231c0bbc242738fef819d9ae045 126 Gene3D G3DSA:3.10.450.10 35 122 3.7E-9 T 14-10-2018 VEJY3_20251 a48be5634eefb7f141422b19701f0b1f 136 Pfam PF03479 Domain of unknown function (DUF296) 5 110 9.2E-24 T 14-10-2018 IPR005175 PPC domain VEJY3_20251 a48be5634eefb7f141422b19701f0b1f 136 SUPERFAMILY SSF117856 3 131 1.26E-37 T 14-10-2018 VEJY3_20251 a48be5634eefb7f141422b19701f0b1f 136 Gene3D G3DSA:3.30.1330.80 2 136 1.3E-47 T 14-10-2018 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 SUPERFAMILY SSF103190 180 254 1.41E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Gene3D G3DSA:1.10.287.130 438 534 1.3E-27 T 14-10-2018 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 SMART SM00388 471 536 1.6E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 SUPERFAMILY SSF55874 525 696 8.91E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Pfam PF02743 Cache domain 134 354 7.7E-20 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Gene3D G3DSA:3.30.450.20 221 375 8.8E-21 T 14-10-2018 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 SUPERFAMILY SSF47384 454 537 8.44E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 4.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 697 8.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 637 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 695 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 SMART SM00387 582 698 3.7E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_23071 b1dba63b57a7635297ce093069e7454b 809 Gene3D G3DSA:3.30.565.10 537 701 3.4E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 Pfam PF03466 LysR substrate binding domain 115 273 4.4E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 Gene3D G3DSA:1.10.10.10 1 83 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 Gene3D G3DSA:3.40.190.10 148 246 4.3E-28 T 14-10-2018 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 Gene3D G3DSA:3.40.190.10 109 270 4.3E-28 T 14-10-2018 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 SUPERFAMILY SSF53850 114 274 5.61E-28 T 14-10-2018 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19026 486c27f30e256c81e9253daeca9e10ee 285 SUPERFAMILY SSF46785 1 81 1.53E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 Gene3D G3DSA:3.40.710.10 235 466 1.2E-52 T 14-10-2018 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 SUPERFAMILY SSF56601 28 437 1.01E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 Gene3D G3DSA:3.50.80.20 81 173 5.3E-12 T 14-10-2018 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 7.0E-28 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 7.0E-28 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 7.0E-28 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 7.0E-28 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 7.0E-28 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_12750 530a6ac71b8e780c4aefc259e66cfa1b 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 436 1.1E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 SUPERFAMILY SSF49899 419 534 1.82E-18 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 3.8E-93 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 89 513 4.5E-134 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 SUPERFAMILY SSF75005 91 399 5.97E-96 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 SMART SM00640 98 502 8.6E-120 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 Gene3D G3DSA:2.60.120.560 412 536 8.0E-23 T 14-10-2018 VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 Gene3D G3DSA:2.115.10.20 65 411 1.3E-101 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VEJY3_06215 d678d7499d5747e005b89c83307ba5d2 543 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 420 530 8.6E-17 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 Pfam PF12833 Helix-turn-helix domain 192 269 7.2E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 SUPERFAMILY SSF46689 221 270 5.38E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 Gene3D G3DSA:1.10.10.60 168 218 9.4E-12 T 14-10-2018 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 Gene3D G3DSA:2.60.120.10 3 99 2.6E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 SUPERFAMILY SSF51215 19 100 1.19E-10 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 SMART SM00342 185 268 6.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 SUPERFAMILY SSF46689 169 219 1.66E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 Pfam PF02311 AraC-like ligand binding domain 28 94 1.1E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 5.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 5.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21351 1abe91c49d836ee54b21a1572a2426a3 270 Gene3D G3DSA:1.10.10.60 219 270 4.1E-16 T 14-10-2018 VEJY3_01550 442839ffccda03834569ec0a476c2874 211 Gene3D G3DSA:3.40.50.1950 1 208 6.7E-79 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEJY3_01550 442839ffccda03834569ec0a476c2874 211 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 207 34.86 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VEJY3_01550 442839ffccda03834569ec0a476c2874 211 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 12 205 3.6E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VEJY3_01550 442839ffccda03834569ec0a476c2874 211 Pfam PF02441 Flavoprotein 11 186 5.9E-26 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VEJY3_01550 442839ffccda03834569ec0a476c2874 211 SUPERFAMILY SSF52507 10 206 5.36E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.541 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 SUPERFAMILY SSF53335 8 267 1.47E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 Gene3D G3DSA:1.10.8.100 200 267 3.5E-25 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 Gene3D G3DSA:3.40.50.150 1 198 2.2E-65 T 14-10-2018 VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 1.6E-77 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 SMART SM00650 25 197 3.3E-89 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VEJY3_01645 276ad48d5b6986bf36eb182b996656f8 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 SMART SM00729 14 219 1.0E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.054 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 Gene3D G3DSA:3.20.20.70 2 329 3.9E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 Pfam PF04055 Radical SAM superfamily 19 181 3.0E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 SUPERFAMILY SSF102114 6 281 3.4E-70 T 14-10-2018 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 3.4E-40 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10890 52263edd6b22aff590b913c59b5fa05b 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 2.8E-8 T 14-10-2018 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 4.9E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Gene3D G3DSA:2.40.110.10 177 300 1.5E-89 T 14-10-2018 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 7.8E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 SUPERFAMILY SSF47203 301 453 3.7E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Gene3D G3DSA:1.10.540.10 63 176 1.5E-89 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 2.4E-110 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.5E-7 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 Gene3D G3DSA:1.20.140.10 301 446 1.5E-89 T 14-10-2018 VEJY3_05945 8b24bb9592b20e96aed486b479147585 760 SUPERFAMILY SSF56645 61 296 1.57E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_22406 350268efb70e301ff297a69088480a46 304 Gene3D G3DSA:2.30.30.40 16 141 3.0E-24 T 14-10-2018 VEJY3_22406 350268efb70e301ff297a69088480a46 304 Gene3D G3DSA:3.40.50.2300 162 299 5.7E-22 T 14-10-2018 VEJY3_22406 350268efb70e301ff297a69088480a46 304 SMART SM00260 11 147 6.2E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_22406 350268efb70e301ff297a69088480a46 304 SMART SM00448 173 290 2.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_22406 350268efb70e301ff297a69088480a46 304 Gene3D G3DSA:2.40.50.180 31 146 3.0E-24 T 14-10-2018 VEJY3_22406 350268efb70e301ff297a69088480a46 304 Pfam PF01584 CheW-like domain 14 149 4.6E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_22406 350268efb70e301ff297a69088480a46 304 Pfam PF00072 Response regulator receiver domain 175 289 7.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_22406 350268efb70e301ff297a69088480a46 304 PIRSF PIRSF002867 1 298 2.2E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VEJY3_22406 350268efb70e301ff297a69088480a46 304 SUPERFAMILY SSF52172 171 292 1.42E-21 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_22406 350268efb70e301ff297a69088480a46 304 SUPERFAMILY SSF50341 10 152 6.28E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Gene3D G3DSA:3.40.120.10 4 155 9.1E-49 T 14-10-2018 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Gene3D G3DSA:3.40.120.10 176 363 2.1E-60 T 14-10-2018 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 1.8E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Gene3D G3DSA:3.40.120.10 258 340 2.1E-60 T 14-10-2018 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.851 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 1.1E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 SUPERFAMILY SSF55957 358 444 3.27E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 SUPERFAMILY SSF53738 157 257 1.49E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.6E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 SUPERFAMILY SSF53738 259 365 2.47E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.5E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 SUPERFAMILY SSF53738 4 182 2.28E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12715 6c3c4ee3e190d426763a6d64141e6c0e 446 Gene3D G3DSA:3.30.310.50 371 446 1.5E-24 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 SUPERFAMILY SSF53067 233 495 5.28E-26 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 Gene3D G3DSA:3.30.420.40 28 225 2.0E-35 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 Gene3D G3DSA:3.30.420.40 231 273 2.0E-35 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 Gene3D G3DSA:3.90.640.10 274 353 2.0E-35 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 30 37 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 SUPERFAMILY SSF53067 26 219 1.73E-27 T 14-10-2018 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 238 251 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 Pfam PF00012 Hsp70 protein 28 352 8.8E-16 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 PRINTS PR00301 70kDa heat shock protein signature 26 39 5.1E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 PRINTS PR00301 70kDa heat shock protein signature 244 254 5.1E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07005 7a453a30bc145ee34682ece8d0d2ea5d 654 PRINTS PR00301 70kDa heat shock protein signature 177 197 5.1E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 511 1.4E-33 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 7.8E-21 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 Gene3D G3DSA:3.90.780.10 366 552 3.1E-58 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 SUPERFAMILY SSF56300 32 364 3.37E-94 T 14-10-2018 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 Gene3D G3DSA:3.60.21.10 30 365 5.8E-124 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 242 265 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 211 228 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 287 307 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 420 443 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 487 506 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 PRINTS PR01607 Apyrase family signature 36 54 9.6E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_03440 e4c70fb5349b1596c633554e6712128b 560 SUPERFAMILY SSF55816 366 544 2.22E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 SUPERFAMILY SSF52343 111 254 1.7E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Gene3D G3DSA:2.40.30.10 18 121 4.2E-25 T 14-10-2018 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Gene3D G3DSA:3.10.20.30 262 371 7.1E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 295 363 4.7E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Gene3D G3DSA:3.40.50.80 126 260 7.7E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 SUPERFAMILY SSF54292 247 370 6.03E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 321 329 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 SUPERFAMILY SSF63380 13 121 2.32E-28 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Pfam PF00175 Oxidoreductase NAD-binding domain 132 238 2.2E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 Pfam PF00970 Oxidoreductase FAD-binding domain 29 120 5.0E-17 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 PRINTS PR00406 Cytochrome B5 reductase signature 168 179 8.2E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 PRINTS PR00406 Cytochrome B5 reductase signature 131 150 8.2E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 PRINTS PR00406 Cytochrome B5 reductase signature 108 122 8.2E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 PRINTS PR00406 Cytochrome B5 reductase signature 224 232 8.2E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_21546 d06e7175975a2f265ff52e1e1f6522cd 371 PRINTS PR00406 Cytochrome B5 reductase signature 71 78 8.2E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_03220 009f9e1c909f62f273723679d6195f29 521 Gene3D G3DSA:3.30.70.270 351 521 5.9E-40 T 14-10-2018 VEJY3_03220 009f9e1c909f62f273723679d6195f29 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 6.2E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_03220 009f9e1c909f62f273723679d6195f29 521 SMART SM00267 351 521 2.0E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_03220 009f9e1c909f62f273723679d6195f29 521 SUPERFAMILY SSF55073 366 518 1.8E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_13935 352b8be5358707ef05bcdd282d819fca 259 Gene3D G3DSA:3.40.50.620 8 221 3.6E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_13935 352b8be5358707ef05bcdd282d819fca 259 SUPERFAMILY SSF52402 26 213 4.61E-55 T 14-10-2018 VEJY3_13935 352b8be5358707ef05bcdd282d819fca 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.208 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VEJY3_13935 352b8be5358707ef05bcdd282d819fca 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 2.3E-49 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VEJY3_13935 352b8be5358707ef05bcdd282d819fca 259 PIRSF PIRSF000857 6 253 5.2E-56 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 SUPERFAMILY SSF55961 158 373 2.2E-32 T 14-10-2018 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 Gene3D G3DSA:3.90.380.10 251 371 4.4E-6 T 14-10-2018 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 182 370 6.4E-20 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 1.5E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 142 168 1.5E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 1.5E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 1.5E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 101 121 1.5E-20 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 Pfam PF00355 Rieske [2Fe-2S] domain 43 132 1.5E-18 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 SUPERFAMILY SSF50022 15 158 7.73E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 Gene3D G3DSA:3.90.380.10 19 223 6.0E-66 T 14-10-2018 VEJY3_06980 4bca3eb82fac06bf2565ab254d368ca5 375 Gene3D G3DSA:2.102.10.10 41 162 6.0E-66 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_07040 7b7a95dbfeefbd3d53fadf3901679aeb 194 Gene3D G3DSA:3.40.50.360 2 194 9.8E-56 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_07040 7b7a95dbfeefbd3d53fadf3901679aeb 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.369 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VEJY3_07040 7b7a95dbfeefbd3d53fadf3901679aeb 194 SUPERFAMILY SSF52218 1 193 1.58E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_07040 7b7a95dbfeefbd3d53fadf3901679aeb 194 Pfam PF02525 Flavodoxin-like fold 3 191 2.3E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 284 360 4.6E-25 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 PIRSF PIRSF000089 92 405 7.9E-69 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 Gene3D G3DSA:3.40.50.1220 277 411 1.4E-38 T 14-10-2018 VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 SUPERFAMILY SSF52402 95 222 3.77E-18 T 14-10-2018 VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 Gene3D G3DSA:3.40.50.620 94 234 1.5E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 Pfam PF01012 Electron transfer flavoprotein domain 100 225 9.0E-18 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_21676 ac82d5d86c24e3e252c921e3b06abc78 412 SUPERFAMILY SSF52467 283 399 7.63E-34 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 SUPERFAMILY SSF81333 15 81 5.89E-16 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 Gene3D G3DSA:1.20.20.10 3 80 7.1E-23 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 Pfam PF00137 ATP synthase subunit C 17 75 2.5E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 25 78 9.4E-13 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 13.669 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 42 63 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 PRINTS PR00124 ATP synthase C subunit signature 35 50 5.1E-12 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 PRINTS PR00124 ATP synthase C subunit signature 52 77 5.1E-12 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21631 f97905102207f15bf943d30b81fd3add 88 PRINTS PR00124 ATP synthase C subunit signature 14 33 5.1E-12 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.5E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Gene3D G3DSA:1.20.140.10 241 385 5.4E-47 T 14-10-2018 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Gene3D G3DSA:1.10.540.10 2 127 5.0E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.0E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Gene3D G3DSA:2.40.110.10 128 240 9.0E-43 T 14-10-2018 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 5.2E-34 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 SUPERFAMILY SSF47203 234 386 1.42E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 SUPERFAMILY SSF56645 6 249 5.24E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 PIRSF PIRSF016578 135 389 8.3E-10 T 14-10-2018 VEJY3_20626 9e7a6d63d7f21123f33a654bc4fe2855 389 PIRSF PIRSF016578 15 102 0.098 T 14-10-2018 VEJY3_07320 3ac65156db5593c71ae5c10f0063aa08 297 SUPERFAMILY SSF52402 15 233 2.56E-53 T 14-10-2018 VEJY3_07320 3ac65156db5593c71ae5c10f0063aa08 297 Gene3D G3DSA:3.40.50.620 2 267 8.3E-49 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_07320 3ac65156db5593c71ae5c10f0063aa08 297 Pfam PF01171 PP-loop family 41 203 1.2E-15 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VEJY3_07320 3ac65156db5593c71ae5c10f0063aa08 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.041 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VEJY3_07320 3ac65156db5593c71ae5c10f0063aa08 297 PIRSF PIRSF004976 2 283 3.2E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 Gene3D G3DSA:3.40.440.10 6 249 1.2E-107 T 14-10-2018 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 SMART SM00788 4 431 0.0 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.9E-192 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 Gene3D G3DSA:3.90.170.10 267 438 1.9E-66 T 14-10-2018 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 SUPERFAMILY SSF52540 3 436 6.16E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 Gene3D G3DSA:1.10.300.10 102 201 1.2E-107 T 14-10-2018 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.7E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_14330 7b8277d7f2e4ad936408f73a15b58eee 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.136 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEJY3_11975 6f4ce15daffa426460276834a2431292 281 SUPERFAMILY SSF56219 57 277 7.46E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_11975 6f4ce15daffa426460276834a2431292 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 53.942 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 VEJY3_11975 6f4ce15daffa426460276834a2431292 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 2.6E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEJY3_11975 6f4ce15daffa426460276834a2431292 281 Gene3D G3DSA:3.60.10.10 60 281 8.8E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_07020 9b0a02363d6e5b4d21091823368d337b 146 Gene3D G3DSA:1.10.3680.10 5 139 3.8E-19 T 14-10-2018 IPR029024 TerB-like VEJY3_07020 9b0a02363d6e5b4d21091823368d337b 146 Pfam PF05099 Tellurite resistance protein TerB 10 143 3.4E-37 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VEJY3_07020 9b0a02363d6e5b4d21091823368d337b 146 SUPERFAMILY SSF158682 1 144 4.97E-28 T 14-10-2018 IPR029024 TerB-like VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 Pfam PF00108 Thiolase, N-terminal domain 7 268 2.5E-76 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 PIRSF PIRSF000429 1 400 6.7E-136 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 SUPERFAMILY SSF53901 4 275 5.21E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 Gene3D G3DSA:3.40.47.10 141 397 6.3E-156 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 SUPERFAMILY SSF53901 276 399 1.04E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 Gene3D G3DSA:3.40.47.10 10 281 6.3E-156 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 6.1E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_17876 8e1a6c559c6dd938646d828e68b3cd46 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEJY3_06755 3d2d1533360bc8af9440a5b5bb1333b7 409 Pfam PF00266 Aminotransferase class-V 46 353 1.0E-26 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_06755 3d2d1533360bc8af9440a5b5bb1333b7 409 Gene3D G3DSA:3.40.640.10 26 287 2.1E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_06755 3d2d1533360bc8af9440a5b5bb1333b7 409 SUPERFAMILY SSF53383 8 388 5.23E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_06755 3d2d1533360bc8af9440a5b5bb1333b7 409 PIRSF PIRSF000524 8 409 2.6E-101 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VEJY3_06755 3d2d1533360bc8af9440a5b5bb1333b7 409 Gene3D G3DSA:3.90.1150.10 15 385 2.1E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 SUPERFAMILY SSF50249 1 67 5.78E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.7E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 SMART SM00357 3 67 7.8E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.8E-41 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 PIRSF PIRSF002599 1 72 1.6E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site VEJY3_04705 9836e6bade43ba16cdad75209b2ddea1 72 Gene3D G3DSA:2.40.50.140 1 65 8.4E-26 T 14-10-2018 VEJY3_24086 f12db48ac334fbf51a6008ec9385cfca 573 PIRSF PIRSF014753 6 573 2.1E-155 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VEJY3_24086 f12db48ac334fbf51a6008ec9385cfca 573 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 18 356 1.7E-90 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 SUPERFAMILY SSF111369 61 289 3.92E-28 T 14-10-2018 VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 Gene3D G3DSA:1.10.287.470 106 177 1.8E-58 T 14-10-2018 VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 276 2.4E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 Gene3D G3DSA:2.40.420.20 291 345 1.8E-58 T 14-10-2018 VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 Gene3D G3DSA:2.40.50.100 72 212 1.8E-58 T 14-10-2018 VEJY3_19686 ce59e66427649b320c7655f91d7ffcb6 351 Gene3D G3DSA:2.40.30.170 60 290 1.8E-58 T 14-10-2018 VEJY3_15791 b41fd9e40015795b7cc6cd8d438423f1 282 SUPERFAMILY SSF52540 15 263 1.02E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15791 b41fd9e40015795b7cc6cd8d438423f1 282 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_15791 b41fd9e40015795b7cc6cd8d438423f1 282 Pfam PF00005 ABC transporter 36 191 7.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_15791 b41fd9e40015795b7cc6cd8d438423f1 282 Gene3D G3DSA:3.40.50.300 13 281 2.8E-83 T 14-10-2018 VEJY3_15791 b41fd9e40015795b7cc6cd8d438423f1 282 SMART SM00382 44 250 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 2.7E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Gene3D G3DSA:1.10.287.1150 85 167 1.6E-31 T 14-10-2018 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 SMART SM00861 594 787 7.5E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 9.2E-55 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 SUPERFAMILY SSF52518 122 532 7.2E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Pfam PF00676 Dehydrogenase E1 component 221 514 4.9E-49 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 SUPERFAMILY SSF52518 577 793 3.11E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Gene3D G3DSA:3.40.50.970 168 534 2.1E-146 T 14-10-2018 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.9E-14 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Gene3D G3DSA:3.40.50.11610 724 930 5.4E-172 T 14-10-2018 VEJY3_03855 66b145b5df842e845f64c800becccde5 941 Gene3D G3DSA:3.40.50.12470 557 803 5.4E-172 T 14-10-2018 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 Hamap MF_01648 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [hcaE]. 1 452 93.542 T 14-10-2018 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit GO:0005506|GO:0008695|GO:0019439|GO:0055114 KEGG: 00360+1.14.12.19|MetaCyc: PWY-6690 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 SUPERFAMILY SSF55961 160 441 2.59E-64 T 14-10-2018 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 Gene3D G3DSA:3.90.380.10 17 431 8.7E-158 T 14-10-2018 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 Pfam PF00355 Rieske [2Fe-2S] domain 43 125 1.6E-22 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 Gene3D G3DSA:2.102.10.10 42 171 8.7E-158 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 SUPERFAMILY SSF50022 5 157 4.98E-51 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 164 432 1.2E-44 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_06610 9ab8efd7575061a366a777272a9272f9 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 1.3E-61 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_04130 885f4bb586270f217e977af83c1a4959 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 457 2.4E-155 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VEJY3_04130 885f4bb586270f217e977af83c1a4959 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.495 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Pfam PF00072 Response regulator receiver domain 4 114 9.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Gene3D G3DSA:3.40.50.2300 1 129 8.2E-35 T 14-10-2018 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Gene3D G3DSA:3.40.50.300 130 314 2.0E-60 T 14-10-2018 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.7E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 1.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Gene3D G3DSA:1.10.8.60 315 379 1.5E-19 T 14-10-2018 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 Gene3D G3DSA:1.10.10.60 388 442 3.4E-14 T 14-10-2018 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 SUPERFAMILY SSF46689 389 440 8.45E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 SMART SM00382 164 307 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04185 a4587395047b0cf631fbae85961af754 445 SUPERFAMILY SSF52172 2 188 2.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_04185 a4587395047b0cf631fbae85961af754 445 SMART SM00448 2 114 3.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_04185 a4587395047b0cf631fbae85961af754 445 SUPERFAMILY SSF52540 144 373 5.33E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 1.7E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 SUPERFAMILY SSF51206 1 142 1.31E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 SMART SM00419 172 218 1.3E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.1E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.1E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 7.8E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 SUPERFAMILY SSF46785 149 225 8.33E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 Gene3D G3DSA:1.10.10.10 149 228 9.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 SMART SM00100 13 131 2.9E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_10285 c8f2388897dff5290fa3fe8b8315eb9a 230 Gene3D G3DSA:2.60.120.10 3 141 7.0E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 SUPERFAMILY SSF52540 74 359 2.39E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 SMART SM00487 22 221 2.6E-61 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 SMART SM00490 257 338 2.1E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 Gene3D G3DSA:3.40.50.300 217 375 1.2E-48 T 14-10-2018 VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 Gene3D G3DSA:3.40.50.300 1 216 5.8E-77 T 14-10-2018 VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 Pfam PF00270 DEAD/DEAH box helicase 27 194 1.2E-54 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_20056 0b789d74ff31a7227627221a40cc62d3 417 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.9E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 SMART SM00382 166 303 0.0057 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 Gene3D G3DSA:1.10.10.60 385 440 1.0E-12 T 14-10-2018 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 SUPERFAMILY SSF52172 27 190 1.4E-7 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 Gene3D G3DSA:1.10.8.60 312 382 1.8E-23 T 14-10-2018 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 SUPERFAMILY SSF52540 146 380 5.22E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 Gene3D G3DSA:3.40.50.300 145 310 8.3E-39 T 14-10-2018 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 Pfam PF00158 Sigma-54 interaction domain 147 305 6.3E-37 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 SUPERFAMILY SSF46689 352 438 6.09E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_02325 e95312f3fe5220f3955840133170eea0 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_01425 3d0c677024946832307b07a0946bb8de 199 Pfam PF04225 Opacity-associated protein A LysM-like domain 115 199 2.0E-37 T 14-10-2018 IPR007340 Opacity-associated protein A VEJY3_01425 3d0c677024946832307b07a0946bb8de 199 Gene3D G3DSA:3.10.450.350 104 195 1.8E-15 T 14-10-2018 VEJY3_01425 3d0c677024946832307b07a0946bb8de 199 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 1.8E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VEJY3_23301 2d542c7281e6f1baadb37327df06da31 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 146 9.0E-35 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 268 283 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 SMART SM01230 130 383 2.3E-95 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 Pfam PF00120 Glutamine synthetase, catalytic domain 131 461 1.8E-105 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 Gene3D G3DSA:3.10.20.70 16 132 3.9E-6 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 Gene3D G3DSA:3.30.590.10 133 462 2.9E-106 T 14-10-2018 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 SUPERFAMILY SSF54368 21 127 2.35E-11 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04375 6f679f5eae7941058cdd4ba7fec8b26f 462 SUPERFAMILY SSF55931 132 461 2.94E-107 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.4E-86 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.1E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 SUPERFAMILY SSF54862 37 173 2.88E-30 T 14-10-2018 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 8.2E-18 T 14-10-2018 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.967 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 PIRSF PIRSF005784 3 188 4.0E-87 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 Gene3D G3DSA:1.10.15.40 38 81 9.2E-8 T 14-10-2018 VEJY3_10920 c97dcd16b688733d857db776771fdf94 198 Gene3D G3DSA:3.30.70.20 82 181 3.0E-22 T 14-10-2018 VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 Gene3D G3DSA:2.40.50.100 68 196 4.1E-73 T 14-10-2018 VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 SUPERFAMILY SSF111369 58 273 1.7E-42 T 14-10-2018 VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.1E-27 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 Gene3D G3DSA:1.10.287.470 103 162 4.1E-73 T 14-10-2018 VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 Gene3D G3DSA:2.40.30.170 58 279 4.1E-73 T 14-10-2018 VEJY3_00180 20f765c20ca38c89943fa5a326ed1bce 368 Gene3D G3DSA:2.40.420.20 280 351 4.1E-73 T 14-10-2018 VEJY3_02635 d7b6b94d5d07d5f69ec036d6df5e8c19 272 Pfam PF00005 ABC transporter 41 197 1.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02635 d7b6b94d5d07d5f69ec036d6df5e8c19 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02635 d7b6b94d5d07d5f69ec036d6df5e8c19 272 SMART SM00382 50 252 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02635 d7b6b94d5d07d5f69ec036d6df5e8c19 272 SUPERFAMILY SSF52540 22 258 1.89E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02635 d7b6b94d5d07d5f69ec036d6df5e8c19 272 Gene3D G3DSA:3.40.50.300 21 268 4.8E-66 T 14-10-2018 VEJY3_23426 2f3e021329bae92779b7a7b749aa7e20 166 SUPERFAMILY SSF55729 3 161 3.43E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_23426 2f3e021329bae92779b7a7b749aa7e20 166 Gene3D G3DSA:3.40.630.30 1 164 3.0E-41 T 14-10-2018 VEJY3_23426 2f3e021329bae92779b7a7b749aa7e20 166 Pfam PF00583 Acetyltransferase (GNAT) family 36 136 1.2E-16 T 14-10-2018 IPR000182 GNAT domain VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 SUPERFAMILY SSF109604 160 359 7.14E-36 T 14-10-2018 VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 Pfam PF00072 Response regulator receiver domain 11 121 9.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 Gene3D G3DSA:3.40.50.2300 3 156 2.9E-37 T 14-10-2018 VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 Gene3D G3DSA:1.10.3210.10 157 370 4.2E-78 T 14-10-2018 VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 SMART SM00448 9 121 7.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 Pfam PF01966 HD domain 182 318 5.6E-21 T 14-10-2018 IPR006674 HD domain VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 SMART SM00471 177 328 2.4E-9 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_23066 b413f0ec480eb940deabc4bb48482926 370 SUPERFAMILY SSF52172 6 130 1.02E-37 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_09095 ab9e669d7d2e8e6349e9c44ac6c380fc 384 SUPERFAMILY SSF53335 114 372 3.13E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_09095 ab9e669d7d2e8e6349e9c44ac6c380fc 384 Gene3D G3DSA:3.40.50.150 112 377 3.2E-95 T 14-10-2018 VEJY3_09095 ab9e669d7d2e8e6349e9c44ac6c380fc 384 Pfam PF02353 Mycolic acid cyclopropane synthetase 106 368 3.7E-89 T 14-10-2018 VEJY3_09095 ab9e669d7d2e8e6349e9c44ac6c380fc 384 PIRSF PIRSF003085 7 383 1.8E-113 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VEJY3_03100 41cc046093c10d0f212fd6fcd776ba4d 415 Gene3D G3DSA:3.40.50.1820 18 415 4.1E-108 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03100 41cc046093c10d0f212fd6fcd776ba4d 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 53.516 T 14-10-2018 IPR010520 UPF0255 family VEJY3_03100 41cc046093c10d0f212fd6fcd776ba4d 415 SUPERFAMILY SSF53474 48 409 8.29E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03100 41cc046093c10d0f212fd6fcd776ba4d 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 5.8E-225 T 14-10-2018 IPR010520 UPF0255 family VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 Pfam PF03193 RsgA GTPase 90 263 2.1E-50 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.973 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 Gene3D G3DSA:1.10.40.50 266 337 2.5E-22 T 14-10-2018 VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 4.7E-51 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 SUPERFAMILY SSF52540 108 324 1.02E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23741 2a408a2000e479c72ead3174407334a2 358 Gene3D G3DSA:3.40.50.300 92 263 1.9E-45 T 14-10-2018 VEJY3_18566 71baa8d718de66ef6efdbf6f4e937136 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.2E-57 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_18566 71baa8d718de66ef6efdbf6f4e937136 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEJY3_18566 71baa8d718de66ef6efdbf6f4e937136 258 Gene3D G3DSA:3.90.226.10 1 258 9.9E-81 T 14-10-2018 VEJY3_18566 71baa8d718de66ef6efdbf6f4e937136 258 SUPERFAMILY SSF52096 3 257 2.03E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 SUPERFAMILY SSF109604 353 489 1.55E-12 T 14-10-2018 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.802 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 4.2E-205 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEJY3_00095 a73b781375c25dfdf8b4344459d84ca0 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.2E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 Gene3D G3DSA:3.40.50.2000 161 318 3.8E-121 T 14-10-2018 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.58 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 SUPERFAMILY SSF53756 5 352 3.53E-127 T 14-10-2018 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 Gene3D G3DSA:3.40.50.2000 8 160 3.8E-121 T 14-10-2018 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 339 4.1E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VEJY3_02080 cd004cf422df25751675f9bd296012e2 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 6.8E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18556 50ffa3fca5cb7cc08656b568107d6c99 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 1.2E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_18556 50ffa3fca5cb7cc08656b568107d6c99 497 Gene3D G3DSA:3.40.309.10 250 450 2.4E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_18556 50ffa3fca5cb7cc08656b568107d6c99 497 SUPERFAMILY SSF53720 2 483 6.54E-145 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_18556 50ffa3fca5cb7cc08656b568107d6c99 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_18556 50ffa3fca5cb7cc08656b568107d6c99 497 Gene3D G3DSA:3.40.605.10 24 458 2.4E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 Gene3D G3DSA:2.30.30.830 111 178 1.2E-27 T 14-10-2018 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 Gene3D G3DSA:2.30.42.10 202 305 7.9E-25 T 14-10-2018 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 243 269 - T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 36 305 7.6E-69 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 SUPERFAMILY SSF50156 209 305 3.37E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_00605 edff711863b60209aae075ed7cc36c0c 305 Pfam PF11356 Type II secretion system protein C 37 177 5.4E-43 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 SUPERFAMILY SSF143968 323 461 5.62E-53 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 Gene3D G3DSA:1.20.5.570 586 617 8.3E-15 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 479 568 2.3E-18 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.1E-161 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 SUPERFAMILY SSF143968 473 615 9.68E-33 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 Gene3D G3DSA:3.40.1670.10 479 585 6.9E-24 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 Gene3D G3DSA:3.40.1670.10 337 453 2.6E-46 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 SUPERFAMILY SSF50475 3 322 2.39E-121 T 14-10-2018 VEJY3_15110 1a57f046d86f348b32d20b426af1749f 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 3.7E-165 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 Gene3D G3DSA:3.30.420.40 4 297 1.6E-100 T 14-10-2018 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 Gene3D G3DSA:3.30.420.40 119 290 1.6E-100 T 14-10-2018 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 Pfam PF00480 ROK family 2 300 1.5E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 SUPERFAMILY SSF53067 1 299 1.35E-57 T 14-10-2018 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.405 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VEJY3_07140 31a3d4093e36f62ab16c4235f40364a6 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 SUPERFAMILY SSF53850 26 516 3.8E-129 T 14-10-2018 VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 Gene3D G3DSA:3.90.76.10 57 165 1.4E-123 T 14-10-2018 VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 Gene3D G3DSA:3.10.105.10 279 494 1.4E-123 T 14-10-2018 VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 Gene3D G3DSA:3.40.190.10 32 278 1.4E-123 T 14-10-2018 VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 3.8E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_00215 671de81592aa0ee9dd85bc08a1786f19 517 PIRSF PIRSF002741 23 512 1.4E-93 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 SUPERFAMILY SSF51905 5 385 2.88E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 Gene3D G3DSA:3.50.50.60 6 339 6.0E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 14-10-2018 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 14-10-2018 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 14-10-2018 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 14-10-2018 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 Pfam PF01494 FAD binding domain 5 347 3.1E-29 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VEJY3_13325 df82f0eae2ba0f01931b0b3c1668c85f 402 Gene3D G3DSA:3.30.9.50 80 270 6.0E-125 T 14-10-2018 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 2.9E-102 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 Gene3D G3DSA:3.40.50.10800 200 295 5.0E-94 T 14-10-2018 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 Gene3D G3DSA:3.40.50.10800 31 322 5.0E-94 T 14-10-2018 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 Gene3D G3DSA:3.40.50.10800 115 340 5.0E-94 T 14-10-2018 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.594 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEJY3_04950 6338c32b0634ecad1dc2cbe2d9f4e202 353 SUPERFAMILY SSF142754 28 341 1.29E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.1E-139 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.841 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_03580 a0d6686fc89645fcd0035fcf14c5cf3a 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 4.2E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:3.40.50.620 306 555 2.7E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.9E-225 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 8.6E-39 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:3.90.740.10 245 296 1.0E-5 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 SUPERFAMILY SSF52374 1 641 1.84E-135 T 14-10-2018 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:3.40.50.620 2 200 1.6E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 SUPERFAMILY SSF50677 191 365 7.46E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.023 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 SUPERFAMILY SSF47323 642 899 6.92E-65 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:1.10.287.380 878 949 4.1E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:1.10.730.10 576 818 8.0E-70 T 14-10-2018 VEJY3_13580 0de754631a2894fc4b4a6dcd3911bb42 952 Gene3D G3DSA:3.90.740.10 201 244 1.6E-5 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Pfam PF02080 TrkA-C domain 391 449 3.5E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Gene3D G3DSA:3.40.50.720 233 366 2.8E-38 T 14-10-2018 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-51 T 14-10-2018 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 SUPERFAMILY SSF116726 366 437 4.84E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Pfam PF02254 TrkA-N domain 3 123 2.3E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Pfam PF02254 TrkA-N domain 235 350 2.0E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 SUPERFAMILY SSF51735 1 151 3.95E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 SUPERFAMILY SSF51735 232 376 4.04E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_15335 21ad71bf340de26cf1be27e8215e6fb7 458 Gene3D G3DSA:3.30.70.1450 367 458 2.6E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 SUPERFAMILY SSF53955 132 206 8.44E-5 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 Pfam PF10135 Rod binding protein 53 102 7.5E-15 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 175 311 1.0E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 Gene3D G3DSA:1.10.530.10 169 307 2.0E-46 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 SMART SM00047 154 313 7.4E-49 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 Gene3D G3DSA:2.10.70.40 203 254 2.0E-46 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 207 228 9.4E-27 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 229 250 9.4E-27 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 294 312 9.4E-27 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 9.4E-27 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 9.4E-27 T 14-10-2018 VEJY3_03585 2223a17337d752741bcf63e936ebc4c6 314 PRINTS PR01002 Flagellar protein FlgJ signature 251 272 9.4E-27 T 14-10-2018 VEJY3_05160 e96fe434cb996402f41e501583bf6093 248 SUPERFAMILY SSF53098 49 204 2.58E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_05160 e96fe434cb996402f41e501583bf6093 248 Pfam PF00665 Integrase core domain 51 165 5.1E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_05160 e96fe434cb996402f41e501583bf6093 248 Gene3D G3DSA:3.30.420.10 48 209 1.9E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 781 4.7E-62 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 SUPERFAMILY SSF51621 461 787 9.71E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Gene3D G3DSA:3.50.30.10 357 476 1.8E-40 T 14-10-2018 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 345 2.3E-120 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 SUPERFAMILY SSF52009 348 466 2.09E-33 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 SUPERFAMILY SSF56059 1 383 2.24E-107 T 14-10-2018 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 454 1.7E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Gene3D G3DSA:3.30.470.20 193 356 8.7E-59 T 14-10-2018 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Gene3D G3DSA:3.30.1490.20 1 192 2.6E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 PIRSF PIRSF000854 1 789 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VEJY3_16941 3c4edc58c270954a1c011c3ba781fda4 789 Gene3D G3DSA:3.20.20.60 477 787 1.4E-103 T 14-10-2018 VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 SUPERFAMILY SSF142433 251 386 1.19E-6 T 14-10-2018 IPR036653 CinA-like, C-terminal VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 4.6E-28 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 Gene3D G3DSA:3.40.980.10 1 171 2.1E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 101.68 T 14-10-2018 IPR008135 Competence-induced protein CinA VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 SMART SM00852 4 171 3.6E-30 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 SUPERFAMILY SSF53218 2 203 3.8E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_10165 a400b70852c482c7017ad3cd508b6900 410 PIRSF PIRSF006728 1 391 1.5E-111 T 14-10-2018 IPR008135 Competence-induced protein CinA VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.4E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 SUPERFAMILY SSF47729 1 90 2.8E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 Gene3D G3DSA:4.10.520.10 1 90 9.2E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_04220 d4312161b227ab0d21750874c155d07d 90 SMART SM00411 1 90 3.3E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1210 22.892 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 SUPERFAMILY SSF52540 26 870 1.19E-111 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 25 452 8.5E-60 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Gene3D G3DSA:3.40.50.300 461 873 1.3E-154 T 14-10-2018 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 1.1E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Gene3D G3DSA:3.40.50.300 25 452 1.0E-159 T 14-10-2018 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 SUPERFAMILY SSF52980 928 1211 2.47E-87 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Gene3D G3DSA:1.10.486.10 602 756 1.3E-154 T 14-10-2018 VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Gene3D G3DSA:3.90.320.10 919 1217 1.6E-102 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 985 1196 5.9E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VEJY3_12340 a9369090f3af65d8ed08cd8569e87533 1227 Gene3D G3DSA:1.10.3170.10 173 365 1.0E-159 T 14-10-2018 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13060 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_05125 33e132bd35c92b8e0a8368f920fdd48c 243 Pfam PF00800 Prephenate dehydratase 31 213 2.7E-18 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEJY3_05125 33e132bd35c92b8e0a8368f920fdd48c 243 Gene3D G3DSA:3.40.190.10 32 210 3.7E-19 T 14-10-2018 VEJY3_05125 33e132bd35c92b8e0a8368f920fdd48c 243 Gene3D G3DSA:3.40.190.10 112 202 3.7E-19 T 14-10-2018 VEJY3_05125 33e132bd35c92b8e0a8368f920fdd48c 243 SUPERFAMILY SSF53850 30 213 6.95E-15 T 14-10-2018 VEJY3_13680 d12a45eabea6102201226ed5a695e85b 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.607 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VEJY3_13680 d12a45eabea6102201226ed5a695e85b 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 4.9E-46 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VEJY3_13680 d12a45eabea6102201226ed5a695e85b 187 Gene3D G3DSA:2.60.450.10 59 186 2.9E-38 T 14-10-2018 VEJY3_13680 d12a45eabea6102201226ed5a695e85b 187 PIRSF PIRSF028513 2 185 7.2E-32 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 SUPERFAMILY SSF56655 1 259 3.66E-83 T 14-10-2018 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.5E-34 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.5E-34 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.5E-34 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.5E-34 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 Gene3D G3DSA:3.30.540.10 1 140 2.0E-49 T 14-10-2018 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 Pfam PF00459 Inositol monophosphatase family 2 259 9.5E-69 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VEJY3_02710 8c446164c0d7f25c39a7228996d42a94 267 Gene3D G3DSA:3.40.190.80 144 266 3.0E-38 T 14-10-2018 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 Gene3D G3DSA:3.90.930.12 1 82 1.3E-30 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 SUPERFAMILY SSF56053 1 82 9.03E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 PIRSF PIRSF002162 1 177 1.6E-44 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 SUPERFAMILY SSF56053 83 177 1.09E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.739 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 Pfam PF00347 Ribosomal protein L6 91 164 2.9E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 Pfam PF00347 Ribosomal protein L6 11 82 8.1E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01355 17b2e4e455c296d5e92fda31ea1b29a9 177 Gene3D G3DSA:3.90.930.12 83 177 3.0E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 SMART SM00342 190 272 1.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 SUPERFAMILY SSF46689 227 273 4.93E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 Gene3D G3DSA:1.10.10.60 233 275 1.2E-13 T 14-10-2018 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 Pfam PF12833 Helix-turn-helix domain 196 273 7.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 Pfam PF02311 AraC-like ligand binding domain 18 150 3.1E-26 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 Gene3D G3DSA:1.10.10.60 169 232 3.1E-14 T 14-10-2018 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 SUPERFAMILY SSF46689 175 224 4.12E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_21981 18cbb3dae1747aabf7d2a420363c7806 275 SUPERFAMILY SSF51215 30 156 4.97E-19 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 Gene3D G3DSA:1.20.1050.10 84 191 5.3E-56 T 14-10-2018 VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 SUPERFAMILY SSF47616 83 199 3.08E-13 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 1.2E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 SUPERFAMILY SSF52833 2 85 9.74E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 Gene3D G3DSA:3.40.30.10 5 195 5.3E-56 T 14-10-2018 VEJY3_23901 fe8e10d34678f05b6312643f189c1bfe 215 Pfam PF14834 Glutathione S-transferase, C-terminal domain 87 196 9.1E-9 T 14-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VEJY3_07325 bc9274f1b0b7795b7a7deb544c505ba0 315 Gene3D G3DSA:3.40.50.12370 1 314 1.1E-110 T 14-10-2018 VEJY3_07325 bc9274f1b0b7795b7a7deb544c505ba0 315 SUPERFAMILY SSF52402 158 308 3.1E-23 T 14-10-2018 VEJY3_07325 bc9274f1b0b7795b7a7deb544c505ba0 315 Pfam PF00582 Universal stress protein family 4 148 3.6E-13 T 14-10-2018 IPR006016 UspA VEJY3_07325 bc9274f1b0b7795b7a7deb544c505ba0 315 Pfam PF00582 Universal stress protein family 178 301 2.3E-15 T 14-10-2018 IPR006016 UspA VEJY3_07325 bc9274f1b0b7795b7a7deb544c505ba0 315 SUPERFAMILY SSF52402 4 158 8.37E-25 T 14-10-2018 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 700 718 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 PIRSF PIRSF000854 4 800 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Gene3D G3DSA:3.20.20.60 483 795 1.1E-97 T 14-10-2018 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 1.1E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 345 6.9E-110 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 SUPERFAMILY SSF51621 466 799 6.28E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 477 793 4.5E-63 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 SUPERFAMILY SSF56059 5 389 2.0E-97 T 14-10-2018 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Gene3D G3DSA:3.50.30.10 361 471 1.4E-36 T 14-10-2018 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Gene3D G3DSA:3.30.470.20 199 360 3.7E-52 T 14-10-2018 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 SUPERFAMILY SSF52009 352 462 1.44E-30 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEJY3_20396 ba0e064727e23c8f771fc10ba7df6563 804 Gene3D G3DSA:3.30.1490.20 6 198 2.2E-68 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 SUPERFAMILY SSF52172 183 306 7.97E-25 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 PIRSF PIRSF002867 1 308 7.2E-102 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 SUPERFAMILY SSF50341 16 157 2.22E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 Pfam PF01584 CheW-like domain 21 155 3.7E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 Pfam PF00072 Response regulator receiver domain 184 302 2.3E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 Gene3D G3DSA:2.30.30.40 23 147 2.6E-28 T 14-10-2018 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 Gene3D G3DSA:2.40.50.180 39 153 2.6E-28 T 14-10-2018 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 SMART SM00448 182 302 4.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 SMART SM00260 17 153 1.6E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_03535 356e32549a8534b55dd592cb9058abf7 308 Gene3D G3DSA:3.40.50.2300 169 307 5.5E-24 T 14-10-2018 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 Pfam PF00155 Aminotransferase class I and II 42 372 1.8E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 45.385 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 Gene3D G3DSA:3.40.640.10 58 283 2.0E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 Gene3D G3DSA:3.90.1150.10 42 372 2.0E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_05445 b5b8f00c6a80f4938f9b7dbaba9574c7 383 SUPERFAMILY SSF53383 4 379 1.04E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.47 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 SUPERFAMILY SSF52540 8 204 9.98E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 3.3E-41 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 Gene3D G3DSA:3.40.50.300 3 213 4.7E-60 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 14-10-2018 VEJY3_10750 d455899acb17b46c64c7d7a88c4c96fa 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 14-10-2018 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 SUPERFAMILY SSF55874 481 630 7.78E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 PIRSF PIRSF036431 24 637 5.4E-189 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Gene3D G3DSA:3.30.565.10 477 632 7.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 630 2.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Gene3D G3DSA:1.10.287.130 370 467 1.3E-15 T 14-10-2018 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 SUPERFAMILY SSF103190 85 213 9.42E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Gene3D G3DSA:3.30.450.20 76 277 1.3E-59 T 14-10-2018 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Pfam PF02743 Cache domain 70 270 6.1E-15 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 SMART SM00387 516 631 9.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 SUPERFAMILY SSF47384 390 469 1.1E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 SMART SM00388 404 472 0.0014 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 468 2.2E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 Gene3D G3DSA:3.30.450.20 87 205 1.3E-59 T 14-10-2018 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 628 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 603 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 584 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_24316 0cafb66fb8910646629929ad0835bff5 644 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07870 8f4472cd36688303b3ee0c0a43e74263 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 1.3E-28 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VEJY3_07870 8f4472cd36688303b3ee0c0a43e74263 323 Gene3D G3DSA:3.40.190.10 123 249 3.1E-59 T 14-10-2018 VEJY3_07870 8f4472cd36688303b3ee0c0a43e74263 323 SUPERFAMILY SSF53850 105 289 9.34E-9 T 14-10-2018 VEJY3_07870 8f4472cd36688303b3ee0c0a43e74263 323 Gene3D G3DSA:3.40.190.150 29 314 3.1E-59 T 14-10-2018 VEJY3_07870 8f4472cd36688303b3ee0c0a43e74263 323 PIRSF PIRSF017082 2 323 6.1E-84 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VEJY3_09915 62af830dec94a98f8ca1e8a4f97db750 76 Pfam PF06806 Putative excisionase (DUF1233) 6 69 1.4E-13 T 14-10-2018 IPR009634 Putative excisionase VEJY3_09915 62af830dec94a98f8ca1e8a4f97db750 76 Gene3D G3DSA:1.10.1660.60 6 75 4.6E-20 T 14-10-2018 IPR038146 Bacteriophage 933W-like, putative excisionase superfamily VEJY3_19401 90433dfb689ca69026e0f04c0441ac62 130 Pfam PF01638 HxlR-like helix-turn-helix 28 113 7.9E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type VEJY3_19401 90433dfb689ca69026e0f04c0441ac62 130 SUPERFAMILY SSF46785 16 124 1.12E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19401 90433dfb689ca69026e0f04c0441ac62 130 Gene3D G3DSA:1.10.10.10 3 127 2.4E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20211 eb76ec470172cc0220431a9578919c25 126 SUPERFAMILY SSF51230 3 125 9.42E-46 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_20211 eb76ec470172cc0220431a9578919c25 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 40.961 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VEJY3_20211 eb76ec470172cc0220431a9578919c25 126 Pfam PF01597 Glycine cleavage H-protein 5 125 3.2E-50 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VEJY3_20211 eb76ec470172cc0220431a9578919c25 126 Gene3D G3DSA:2.40.50.100 1 126 1.3E-50 T 14-10-2018 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 Gene3D G3DSA:3.40.50.300 26 267 2.4E-82 T 14-10-2018 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.6E-142 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 SUPERFAMILY SSF54752 269 325 1.2E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 SUPERFAMILY SSF52540 4 266 8.26E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 Gene3D G3DSA:3.30.250.10 268 326 2.8E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 SMART SM00382 57 228 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 93 122 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 243 272 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 297 314 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 210 238 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 127 156 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 PRINTS PR00142 RecA protein signature 165 194 4.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_13160 c5dd6c818910c41568ef42d11ac663a9 348 Hamap MF_00268 Protein RecA [recA]. 5 329 50.413 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Gene3D G3DSA:1.10.860.10 443 585 9.4E-59 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SMART SM00400 36 90 9.5E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SMART SM00493 265 336 5.8E-19 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 PIRSF PIRSF002811 2 584 5.4E-144 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 1.2E-146 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SUPERFAMILY SSF57783 4 101 1.5E-38 T 14-10-2018 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Pfam PF13155 Toprim-like 269 355 2.5E-13 T 14-10-2018 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Pfam PF08278 DNA primase DnaG DnaB-binding 456 579 4.5E-37 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SUPERFAMILY SSF56731 122 430 3.53E-110 T 14-10-2018 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Gene3D G3DSA:3.90.580.10 1 102 3.4E-40 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Hamap MF_00974 DNA primase [dnaG]. 4 581 29.22 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Pfam PF01807 CHC2 zinc finger 6 101 1.1E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Gene3D G3DSA:3.90.980.10 121 246 1.5E-45 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Pfam PF10410 DnaB-helicase binding domain of primase 376 430 7.0E-8 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Gene3D G3DSA:3.40.1360.10 247 373 2.7E-42 T 14-10-2018 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 8.0E-42 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SMART SM00766 455 580 1.4E-58 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 SUPERFAMILY SSF117023 452 583 2.88E-45 T 14-10-2018 VEJY3_01820 ff677ef9a7f8929d38b2bddd815198f6 585 Gene3D G3DSA:1.20.50.20 374 432 9.7E-8 T 14-10-2018 VEJY3_16711 b86c1e71e910f5e8fcbf33e08ca0af6b 470 PIRSF PIRSF018788 3 460 8.0E-235 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEJY3_16711 b86c1e71e910f5e8fcbf33e08ca0af6b 470 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 444 6.5E-220 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEJY3_16711 b86c1e71e910f5e8fcbf33e08ca0af6b 470 Gene3D G3DSA:3.20.20.70 144 452 2.0E-145 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_16711 b86c1e71e910f5e8fcbf33e08ca0af6b 470 Gene3D G3DSA:2.30.170.30 3 56 1.4E-20 T 14-10-2018 VEJY3_16711 b86c1e71e910f5e8fcbf33e08ca0af6b 470 Gene3D G3DSA:1.10.220.70 57 143 5.6E-36 T 14-10-2018 VEJY3_04490 ad38c77e6e60d9677e43c52f5778650b 179 SUPERFAMILY SSF53474 2 176 1.2E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04490 ad38c77e6e60d9677e43c52f5778650b 179 Gene3D G3DSA:3.40.50.1820 1 179 1.5E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04490 ad38c77e6e60d9677e43c52f5778650b 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.9E-69 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VEJY3_04490 ad38c77e6e60d9677e43c52f5778650b 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.304 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 Gene3D G3DSA:3.30.70.260 328 409 1.4E-31 T 14-10-2018 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 Gene3D G3DSA:3.40.50.720 109 297 9.5E-112 T 14-10-2018 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.2E-39 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 SUPERFAMILY SSF52283 7 136 3.4E-50 T 14-10-2018 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 SUPERFAMILY SSF55021 338 409 3.51E-16 T 14-10-2018 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 Gene3D G3DSA:3.40.50.720 14 312 9.5E-112 T 14-10-2018 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 4.1E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_13355 a362be47bfc0093222ddc58137393c9c 410 SUPERFAMILY SSF51735 108 295 3.5E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 SMART SM00862 169 245 8.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 SUPERFAMILY SSF46894 146 245 3.97E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 Gene3D G3DSA:3.40.50.2300 4 136 9.6E-36 T 14-10-2018 VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 170 245 1.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 SUPERFAMILY SSF52172 18 145 6.12E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 Pfam PF00072 Response regulator receiver domain 20 129 2.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 Gene3D G3DSA:1.10.10.10 137 249 1.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23541 cefa3bf15fc8c8b1467c1e6d6d178077 249 SMART SM00448 18 129 3.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_13305 5045de4cf33562833a15ea0eeaa92001 86 SUPERFAMILY SSF109910 2 79 3.53E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VEJY3_13305 5045de4cf33562833a15ea0eeaa92001 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 6.5E-25 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase VEJY3_13305 5045de4cf33562833a15ea0eeaa92001 86 Gene3D G3DSA:1.10.150.250 1 86 6.3E-37 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VEJY3_14950 567273cd5771026f2f690d57b42062b8 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.9E-23 T 14-10-2018 IPR019620 Putative metal-binding protein VEJY3_14950 567273cd5771026f2f690d57b42062b8 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 1.5E-22 T 14-10-2018 IPR019620 Putative metal-binding protein VEJY3_04090 16ce2148ee90bfce0eeb01f0145bb834 314 SUPERFAMILY SSF159501 14 240 1.92E-6 T 14-10-2018 VEJY3_05720 0fe4370f3c29f59b6a099389ec9c8281 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.3E-94 T 14-10-2018 IPR014319 Phage shock protein, PspA VEJY3_05720 0fe4370f3c29f59b6a099389ec9c8281 223 Pfam PF04012 PspA/IM30 family 2 217 5.6E-60 T 14-10-2018 IPR007157 PspA/IM30 VEJY3_10980 beef8ea6553db4a1a38052d7f05ee74a 111 Pfam PF00462 Glutaredoxin 16 80 2.7E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_10980 beef8ea6553db4a1a38052d7f05ee74a 111 Gene3D G3DSA:3.40.30.10 2 106 6.2E-31 T 14-10-2018 VEJY3_10980 beef8ea6553db4a1a38052d7f05ee74a 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 7.6E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related VEJY3_10980 beef8ea6553db4a1a38052d7f05ee74a 111 SUPERFAMILY SSF52833 1 104 2.58E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10980 beef8ea6553db4a1a38052d7f05ee74a 111 PIRSF PIRSF005894 1 107 2.8E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 Gene3D G3DSA:2.40.30.130 1 83 8.0E-17 T 14-10-2018 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 SUPERFAMILY SSF50447 1 83 2.37E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 Gene3D G3DSA:3.30.980.10 84 212 1.6E-26 T 14-10-2018 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 5.3E-6 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 SUPERFAMILY SSF55186 84 210 2.62E-25 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 Pfam PF01411 tRNA synthetases class II (A) 14 86 2.3E-8 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VEJY3_08330 56b71103bf3843959bd6aafb90b6cd1c 216 SMART SM00863 166 208 4.3E-7 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 Gene3D G3DSA:1.20.1560.10 4 309 5.4E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 Gene3D G3DSA:3.40.50.300 322 570 7.5E-66 T 14-10-2018 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 Pfam PF00005 ABC transporter 343 490 6.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 SMART SM00382 352 545 8.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 SUPERFAMILY SSF90123 15 307 4.45E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_23266 ef4ff190a87e1921cb4faccd05adab16 573 SUPERFAMILY SSF52540 315 550 1.42E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 Pfam PF00664 ABC transporter transmembrane region 25 288 9.6E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 Pfam PF00005 ABC transporter 353 501 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 Gene3D G3DSA:3.40.50.300 328 588 3.8E-83 T 14-10-2018 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 SUPERFAMILY SSF90123 8 321 4.45E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 Gene3D G3DSA:1.20.1560.10 1 324 5.2E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 SUPERFAMILY SSF52540 332 571 4.49E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06950 3615ffd95ba5d60f6228bd2f639441f0 592 SMART SM00382 362 547 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 Pfam PF00005 ABC transporter 376 524 8.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 SUPERFAMILY SSF52540 356 591 3.24E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 Pfam PF00664 ABC transporter transmembrane region 25 312 1.2E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 Gene3D G3DSA:3.40.50.300 353 597 7.4E-81 T 14-10-2018 VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 Gene3D G3DSA:1.20.1560.10 2 346 1.6E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 SMART SM00382 385 572 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07635 f234025a4c250f375c2ef6a90ec014d8 598 SUPERFAMILY SSF90123 12 345 3.4E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_16096 3264b279e7e41c643fef9c5ef2b7217f 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 6.5E-28 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VEJY3_16096 3264b279e7e41c643fef9c5ef2b7217f 81 SUPERFAMILY SSF101744 1 81 5.07E-22 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VEJY3_16096 3264b279e7e41c643fef9c5ef2b7217f 81 Gene3D G3DSA:2.30.30.400 2 79 1.5E-15 T 14-10-2018 IPR038626 Rof-like superfamily VEJY3_07270 c3b6110c50ae89a90454fc6c16bbc671 406 Pfam PF00909 Ammonium Transporter Family 23 399 1.5E-85 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VEJY3_07270 c3b6110c50ae89a90454fc6c16bbc671 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VEJY3_07270 c3b6110c50ae89a90454fc6c16bbc671 406 SUPERFAMILY SSF111352 17 384 3.66E-96 T 14-10-2018 VEJY3_07270 c3b6110c50ae89a90454fc6c16bbc671 406 Gene3D G3DSA:1.10.3430.10 2 406 1.6E-102 T 14-10-2018 IPR029020 Ammonium/urea transporter VEJY3_02260 4411c296bf54d337393735072febb16b 183 Gene3D G3DSA:1.20.120.520 1 153 3.0E-17 T 14-10-2018 VEJY3_02260 4411c296bf54d337393735072febb16b 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.0E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 SUPERFAMILY SSF53383 2 395 1.81E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 Gene3D G3DSA:3.40.640.10 60 302 5.9E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.5E-34 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 PRINTS PR00799 Aspartate aminotransferase signature 343 361 1.5E-34 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.5E-34 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 PRINTS PR00799 Aspartate aminotransferase signature 275 300 1.5E-34 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 Gene3D G3DSA:3.90.1150.10 11 393 5.9E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_23021 0e7997c46f5d2977cfef18367c068b1f 397 Pfam PF00155 Aminotransferase class I and II 27 394 2.3E-82 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 SMART SM00382 32 238 2.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 Gene3D G3DSA:3.40.50.300 1 322 1.3E-98 T 14-10-2018 VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 1.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 SUPERFAMILY SSF52540 31 301 9.1E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 Pfam PF00005 ABC transporter 24 180 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_10850 30a397b9e83f5d55ccaef5dae548e7f5 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.3E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_13440 be3d8b972ee3eb274ff2f9228d42a1c3 141 SUPERFAMILY SSF53098 3 137 3.34E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_13440 be3d8b972ee3eb274ff2f9228d42a1c3 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.219 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VEJY3_13440 be3d8b972ee3eb274ff2f9228d42a1c3 141 Gene3D G3DSA:3.30.420.140 1 138 2.6E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VEJY3_13440 be3d8b972ee3eb274ff2f9228d42a1c3 141 SMART SM00732 3 104 2.7E-34 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VEJY3_13440 be3d8b972ee3eb274ff2f9228d42a1c3 141 Pfam PF03652 Holliday junction resolvase 4 136 7.6E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 Gene3D G3DSA:1.10.287.1050 1 83 3.7E-28 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 SUPERFAMILY SSF81273 93 134 3.49E-10 T 14-10-2018 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 Pfam PF00816 H-NS histone family 32 127 4.9E-20 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 SUPERFAMILY SSF81273 2 58 1.86E-15 T 14-10-2018 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 PIRSF PIRSF002096 1 134 5.1E-51 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 SMART SM00528 87 134 1.2E-21 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VEJY3_20901 3e1831ce469aad624f9e40b47300f185 134 Gene3D G3DSA:4.10.430.10 92 134 9.3E-22 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.325 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 SUPERFAMILY SSF53720 3 409 4.45E-111 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 PIRSF PIRSF000151 1 416 8.0E-165 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 Gene3D G3DSA:3.40.605.10 15 408 4.1E-151 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 Gene3D G3DSA:3.40.309.10 223 373 4.1E-151 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_03115 c547f45d19bea7fc2c8cd25575a25b85 416 Pfam PF00171 Aldehyde dehydrogenase family 5 280 1.1E-15 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_04575 58207912fc8009c1c49b7441c49f2ec7 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 6.3E-187 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VEJY3_04575 58207912fc8009c1c49b7441c49f2ec7 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.256 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 SMART SM00347 26 124 9.5E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 Gene3D G3DSA:1.10.10.10 2 141 1.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 Pfam PF01047 MarR family 33 90 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_19366 43ad0fc99eaea7f747c465d5310b8016 144 SUPERFAMILY SSF46785 5 130 3.34E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13285 459d211c6648aaa50044c277349b4390 319 Pfam PF17188 MucB/RseB C-terminal domain 218 311 6.8E-28 T 14-10-2018 IPR033436 MucB/RseB, C-terminal VEJY3_13285 459d211c6648aaa50044c277349b4390 319 Pfam PF03888 MucB/RseB N-terminal domain 26 195 1.9E-56 T 14-10-2018 IPR033434 MucB/RseB, N-terminal VEJY3_13285 459d211c6648aaa50044c277349b4390 319 PIRSF PIRSF005427 1 318 5.3E-82 T 14-10-2018 IPR005588 MucB/RseB VEJY3_13285 459d211c6648aaa50044c277349b4390 319 Gene3D G3DSA:3.30.200.100 217 317 8.5E-29 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VEJY3_13285 459d211c6648aaa50044c277349b4390 319 Gene3D G3DSA:2.50.20.10 24 208 1.6E-50 T 14-10-2018 VEJY3_20631 c1abc36dbaf6a5cea4ded86461b20452 534 Gene3D G3DSA:3.90.226.10 1 270 6.8E-94 T 14-10-2018 VEJY3_20631 c1abc36dbaf6a5cea4ded86461b20452 534 Gene3D G3DSA:3.90.226.10 272 534 9.8E-102 T 14-10-2018 VEJY3_20631 c1abc36dbaf6a5cea4ded86461b20452 534 SUPERFAMILY SSF52096 23 269 9.23E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20631 c1abc36dbaf6a5cea4ded86461b20452 534 Pfam PF01039 Carboxyl transferase domain 48 524 2.1E-150 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEJY3_20631 c1abc36dbaf6a5cea4ded86461b20452 534 SUPERFAMILY SSF52096 278 534 1.71E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00267 470 643 4.8E-31 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SUPERFAMILY SSF48452 183 404 7.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 Gene3D G3DSA:1.25.40.10 98 289 1.9E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 Gene3D G3DSA:1.25.40.10 290 458 3.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 640 6.0E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 638 2.6E-31 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00028 255 288 0.0083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00028 295 328 52.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00028 375 408 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00028 335 368 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SMART SM00028 215 248 6.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 Pfam PF13424 Tetratricopeptide repeat 217 286 3.2E-9 T 14-10-2018 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SUPERFAMILY SSF55073 487 640 1.73E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 Gene3D G3DSA:3.30.70.270 474 642 6.6E-36 T 14-10-2018 VEJY3_07760 bb14efb2b46cc4350befec7e1d3f917d 653 SUPERFAMILY SSF48452 91 213 3.56E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_06095 c9b2b80bffca64f827574fce79254b3a 130 Pfam PF03846 Cell division inhibitor SulA 15 96 9.3E-8 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 VEJY3_06095 c9b2b80bffca64f827574fce79254b3a 130 Gene3D G3DSA:3.40.50.300 14 122 1.1E-9 T 14-10-2018 VEJY3_06095 c9b2b80bffca64f827574fce79254b3a 130 SUPERFAMILY SSF52540 21 99 1.96E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.1E-57 T 14-10-2018 VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 Gene3D G3DSA:3.40.50.720 1 253 2.7E-80 T 14-10-2018 VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 SUPERFAMILY SSF51735 6 252 3.4E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_16041 8b1fcf470a29ae526e3d16cf143f90ec 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 9.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 SUPERFAMILY SSF52518 6 319 1.33E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Gene3D G3DSA:3.40.50.970 1 325 5.7E-131 T 14-10-2018 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 1.5E-165 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Gene3D G3DSA:3.40.50.970 326 537 8.5E-85 T 14-10-2018 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Pfam PF02780 Transketolase, C-terminal domain 543 655 2.6E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Gene3D G3DSA:3.40.50.920 538 664 4.6E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.7E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 SUPERFAMILY SSF52518 333 526 1.36E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 SMART SM00861 354 525 3.3E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_13395 bdbeae6f016b0740e6a00bdcdec0e933 664 SUPERFAMILY SSF52922 533 664 6.67E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 11 148 9.9E-16 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Gene3D G3DSA:2.60.40.10 627 701 1.9E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Gene3D G3DSA:2.60.120.260 5 151 6.2E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_09170 6138572e988bba40f5e042b97a386737 806 SUPERFAMILY SSF49303 182 262 1.7E-11 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEJY3_09170 6138572e988bba40f5e042b97a386737 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 274 288 2.7E-7 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 388 403 2.7E-7 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 PRINTS PR00132 Glycosyl hydrolase family 2 signature 305 323 2.7E-7 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 SUPERFAMILY SSF49785 3 150 9.92E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_09170 6138572e988bba40f5e042b97a386737 806 SUPERFAMILY SSF51445 259 581 7.68E-62 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Gene3D G3DSA:2.60.40.10 153 262 2.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Gene3D G3DSA:2.60.40.10 703 805 3.4E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Pfam PF16355 Domain of unknown function (DUF4982) 638 696 2.8E-12 T 14-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Pfam PF00703 Glycosyl hydrolases family 2 162 262 3.1E-11 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_09170 6138572e988bba40f5e042b97a386737 806 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 271 403 6.6E-18 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_10965 1252fa37c8a9a23eccb732c7a6956d13 216 SMART SM00479 18 204 1.3E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_10965 1252fa37c8a9a23eccb732c7a6956d13 216 Hamap MF_00157 Ribonuclease T [rnt]. 1 216 114.71 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VEJY3_10965 1252fa37c8a9a23eccb732c7a6956d13 216 Pfam PF00929 Exonuclease 20 195 2.7E-45 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_10965 1252fa37c8a9a23eccb732c7a6956d13 216 Gene3D G3DSA:3.30.420.10 9 215 1.2E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_10965 1252fa37c8a9a23eccb732c7a6956d13 216 SUPERFAMILY SSF53098 10 208 5.43E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_22461 f5a9d7e25433d650ca22ff0262d142bb 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 8.5E-21 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VEJY3_22461 f5a9d7e25433d650ca22ff0262d142bb 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 SUPERFAMILY SSF48230 41 364 8.09E-63 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 SUPERFAMILY SSF49863 621 719 5.3E-16 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Gene3D G3DSA:2.60.220.10 614 721 8.1E-22 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 SUPERFAMILY SSF74650 354 617 1.83E-71 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 357 607 1.4E-70 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Gene3D G3DSA:1.50.10.100 41 327 1.8E-67 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 622 683 3.4E-13 T 14-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 47 301 5.5E-37 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VEJY3_08795 c2a7c38c66757c4fe6e997b619352d77 978 Gene3D G3DSA:2.70.98.10 354 613 3.9E-78 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_03725 b608ebcec8ac4740c943493dde67aa01 291 SMART SM00862 30 107 3.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_03725 b608ebcec8ac4740c943493dde67aa01 291 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 4.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_03725 b608ebcec8ac4740c943493dde67aa01 291 SUPERFAMILY SSF46894 10 107 1.28E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_03725 b608ebcec8ac4740c943493dde67aa01 291 Gene3D G3DSA:1.10.10.10 6 107 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 Pfam PF08220 DeoR-like helix-turn-helix domain 5 58 2.6E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 5.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 5.9E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 SUPERFAMILY SSF46785 3 78 1.46E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 9.3E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 SMART SM01134 72 232 1.3E-63 T 14-10-2018 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 SMART SM00420 5 57 8.6E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_22231 3cf94dca899cff3f58abf16839c7be0a 251 SUPERFAMILY SSF100950 75 232 4.08E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 Gene3D G3DSA:3.40.190.10 217 526 4.3E-138 T 14-10-2018 VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 Gene3D G3DSA:3.10.105.10 296 514 4.3E-138 T 14-10-2018 VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 455 1.8E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 Gene3D G3DSA:3.90.76.10 44 216 4.3E-138 T 14-10-2018 VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 PIRSF PIRSF002741 4 538 9.9E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_05710 a0d6fc680760c3efbe105b801fbae8c7 539 SUPERFAMILY SSF53850 35 535 9.59E-127 T 14-10-2018 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 SUPERFAMILY SSF63380 93 198 2.04E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 PIRSF PIRSF000498 1 211 5.5E-81 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 6.2E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 Pfam PF00677 Lumazine binding domain 100 184 9.7E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 Pfam PF00677 Lumazine binding domain 3 87 7.5E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 SUPERFAMILY SSF63380 1 89 4.51E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 Gene3D G3DSA:2.40.30.20 102 206 1.0E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_03130 605d89fef0215b5218e6665778aba6d3 217 Gene3D G3DSA:2.40.30.20 1 89 1.1E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15961 a9c20bd1650c0f74d21c93337de13694 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.601 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VEJY3_15961 a9c20bd1650c0f74d21c93337de13694 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 4.7E-34 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VEJY3_15961 a9c20bd1650c0f74d21c93337de13694 94 Gene3D G3DSA:2.60.120.10 1 94 2.9E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_15961 a9c20bd1650c0f74d21c93337de13694 94 SUPERFAMILY SSF51182 3 94 1.51E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_20266 eefdcced3d71b7d3ab2d6329f35be440 332 PIRSF PIRSF006468 1 332 1.7E-98 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 VEJY3_20266 eefdcced3d71b7d3ab2d6329f35be440 332 SUPERFAMILY SSF56752 3 328 6.41E-81 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VEJY3_20266 eefdcced3d71b7d3ab2d6329f35be440 332 Pfam PF01063 Amino-transferase class IV 48 285 3.6E-31 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VEJY3_20266 eefdcced3d71b7d3ab2d6329f35be440 332 Gene3D G3DSA:3.20.10.10 150 314 2.4E-95 T 14-10-2018 VEJY3_20266 eefdcced3d71b7d3ab2d6329f35be440 332 Gene3D G3DSA:3.30.470.10 4 327 2.4E-95 T 14-10-2018 VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.0E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.0E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.0E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 4.0E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.0E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 Pfam PF00106 short chain dehydrogenase 3 189 1.5E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 SUPERFAMILY SSF51735 3 217 3.73E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_13535 406932eff3b0e1ab7ce163f8ab861d24 224 Gene3D G3DSA:3.40.50.720 2 223 2.2E-56 T 14-10-2018 VEJY3_12875 edcce910333cd5f38d3ce3e9a3cdd6fd 337 SUPERFAMILY SSF53850 24 332 1.94E-78 T 14-10-2018 VEJY3_12875 edcce910333cd5f38d3ce3e9a3cdd6fd 337 PIRSF PIRSF002825 1 337 1.4E-102 T 14-10-2018 IPR026045 Ferric binding protein VEJY3_12875 edcce910333cd5f38d3ce3e9a3cdd6fd 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 299 4.3E-20 T 14-10-2018 VEJY3_12875 edcce910333cd5f38d3ce3e9a3cdd6fd 337 Gene3D G3DSA:3.40.190.10 120 328 6.7E-127 T 14-10-2018 VEJY3_12875 edcce910333cd5f38d3ce3e9a3cdd6fd 337 Gene3D G3DSA:3.40.190.10 25 297 6.7E-127 T 14-10-2018 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Gene3D G3DSA:3.30.230.80 237 409 4.6E-71 T 14-10-2018 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Gene3D G3DSA:3.40.50.11260 410 501 3.6E-35 T 14-10-2018 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 174 8.4E-13 T 14-10-2018 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PIRSF PIRSF002583 1 634 2.5E-212 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 SUPERFAMILY SSF55874 10 216 1.83E-62 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.8E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Gene3D G3DSA:1.20.120.790 502 632 1.9E-42 T 14-10-2018 IPR037196 HSP90, C-terminal domain VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 SUPERFAMILY SSF110942 520 632 7.32E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Gene3D G3DSA:3.30.565.10 6 219 4.5E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 SUPERFAMILY SSF54211 238 493 3.11E-100 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 SMART SM00387 32 189 4.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Pfam PF00183 Hsp90 protein 228 632 9.3E-128 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEJY3_03730 6221a8a7343a1b96728acbd7afb3f0fa 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.383 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEJY3_23886 44cd1e4755090defe304954d25009663 287 Pfam PF03466 LysR substrate binding domain 82 281 1.3E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23886 44cd1e4755090defe304954d25009663 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23886 44cd1e4755090defe304954d25009663 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 32 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23886 44cd1e4755090defe304954d25009663 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 11 22 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23886 44cd1e4755090defe304954d25009663 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 55 1.6E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23886 44cd1e4755090defe304954d25009663 287 Gene3D G3DSA:1.10.10.10 1 85 3.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23886 44cd1e4755090defe304954d25009663 287 Gene3D G3DSA:3.40.190.290 86 284 2.3E-45 T 14-10-2018 VEJY3_23886 44cd1e4755090defe304954d25009663 287 SUPERFAMILY SSF53850 83 285 1.27E-27 T 14-10-2018 VEJY3_23886 44cd1e4755090defe304954d25009663 287 SUPERFAMILY SSF46785 2 78 9.25E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Gene3D G3DSA:3.20.110.10 1 275 5.8E-99 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 266 1.4E-36 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Gene3D G3DSA:1.20.1270.50 282 381 1.3E-26 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Gene3D G3DSA:2.70.98.30 480 768 5.9E-76 T 14-10-2018 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 SUPERFAMILY SSF88688 284 374 7.19E-6 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 SMART SM00872 278 356 5.0E-13 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 386 873 1.6E-34 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 SUPERFAMILY SSF74650 374 879 1.88E-72 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 SUPERFAMILY SSF88713 5 271 2.45E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEJY3_09115 5eae98b86c8701e8740d742097320d63 879 Pfam PF09261 Alpha mannosidase middle domain 279 356 1.6E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VEJY3_13470 f4f41e401d548ed44c0287a7a3b87d6b 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 8.9E-26 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VEJY3_13470 f4f41e401d548ed44c0287a7a3b87d6b 96 Gene3D G3DSA:3.30.1200.10 1 96 8.3E-35 T 14-10-2018 IPR036591 YggU-like superfamily VEJY3_13470 f4f41e401d548ed44c0287a7a3b87d6b 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.679 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VEJY3_13470 f4f41e401d548ed44c0287a7a3b87d6b 96 SMART SM01152 8 84 3.1E-39 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VEJY3_13470 f4f41e401d548ed44c0287a7a3b87d6b 96 SUPERFAMILY SSF69786 4 96 4.45E-32 T 14-10-2018 IPR036591 YggU-like superfamily VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 SUPERFAMILY SSF55931 102 468 2.26E-137 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 Gene3D G3DSA:3.10.20.70 2 104 3.9E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 Gene3D G3DSA:3.30.590.10 105 457 7.3E-149 T 14-10-2018 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 2.2E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.8E-138 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.5E-211 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 SUPERFAMILY SSF54368 3 100 1.57E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 SMART SM01230 102 379 1.7E-152 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_00550 726a284d316b53329ee020fbbd12b447 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 4.0E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 SMART SM00354 9 79 2.0E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 Gene3D G3DSA:3.40.50.2300 70 311 9.9E-67 T 14-10-2018 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 2.9E-28 T 14-10-2018 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 Gene3D G3DSA:1.10.260.40 1 67 1.4E-17 T 14-10-2018 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 14-10-2018 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 SUPERFAMILY SSF53822 67 320 1.59E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 SUPERFAMILY SSF47413 9 67 1.9E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_00235 3342868a0d9ea2a08cd715e4c785f522 335 Gene3D G3DSA:3.40.50.2300 167 295 9.9E-67 T 14-10-2018 VEJY3_21886 c08b68d22e606f287460e5af0bdf07bb 72 Pfam PF03889 Domain of unknown function 22 59 3.3E-20 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PIRSF PIRSF001480 2 397 1.6E-101 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 SUPERFAMILY SSF51182 3 380 5.82E-98 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 Gene3D G3DSA:2.60.120.10 309 390 2.9E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 Gene3D G3DSA:2.60.120.10 10 283 2.9E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 Gene3D G3DSA:1.10.441.10 151 308 2.9E-132 T 14-10-2018 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 Pfam PF01238 Phosphomannose isomerase type I 6 363 5.4E-88 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09005 e4cacc74fd0d86760fbbb0caa71853cc 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_05220 db11a18c02188bdcf0d2518f40fa1165 445 Pfam PF03167 Uracil DNA glycosylase superfamily 41 222 5.8E-6 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_05220 db11a18c02188bdcf0d2518f40fa1165 445 ProDom PD315856 ORF119 CPE0798 YOXB 30 221 9.0E-37 T 14-10-2018 IPR020530 Uncharacterised protein family, YoxB VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 Pfam PF03477 ATP cone domain 6 92 1.4E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 SUPERFAMILY SSF51998 222 739 7.94E-165 T 14-10-2018 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 3.9E-114 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.2E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 Gene3D G3DSA:3.20.70.20 78 742 1.2E-155 T 14-10-2018 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 6.8E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10135 878da31f66f71bad037a9aea45e606f8 760 SUPERFAMILY SSF48168 10 221 4.58E-74 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Gene3D G3DSA:3.30.230.10 23 202 5.2E-131 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 SUPERFAMILY SSF55060 205 382 4.48E-52 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Gene3D G3DSA:3.30.70.890 203 358 5.2E-131 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 SUPERFAMILY SSF54211 2 204 4.25E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Hamap MF_00246 Galactokinase [galK]. 26 382 43.999 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.3E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PIRSF PIRSF000530 1 384 3.3E-127 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 6.9E-44 T 14-10-2018 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 6.9E-44 T 14-10-2018 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 6.9E-44 T 14-10-2018 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 6.9E-44 T 14-10-2018 VEJY3_21471 cb9137397c5a124f611fbbf09dd18236 386 Pfam PF08544 GHMP kinases C terminal 280 362 7.3E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VEJY3_01230 a3d4e6866f642eb117f15eef9d4c20a6 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.382 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VEJY3_01230 a3d4e6866f642eb117f15eef9d4c20a6 80 Gene3D G3DSA:1.20.5.340 1 79 9.1E-28 T 14-10-2018 VEJY3_01230 a3d4e6866f642eb117f15eef9d4c20a6 80 Pfam PF06005 Cell division protein ZapB 1 78 2.4E-24 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.135 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 SUPERFAMILY SSF51717 15 208 9.42E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 Gene3D G3DSA:3.20.20.20 1 261 2.7E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 Pfam PF04551 GcpE protein 14 354 2.8E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 SUPERFAMILY SSF56014 265 354 1.76E-11 T 14-10-2018 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 PIRSF PIRSF004640 1 364 1.1E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEJY3_02780 90723395daadb0698ba2c6edb20ba90d 372 Gene3D G3DSA:3.30.413.10 262 361 5.2E-25 T 14-10-2018 VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 Gene3D G3DSA:3.10.450.50 2 148 1.2E-21 T 14-10-2018 VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 SUPERFAMILY SSF54427 203 327 2.57E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 Gene3D G3DSA:3.10.450.50 193 327 1.0E-26 T 14-10-2018 VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 SUPERFAMILY SSF54427 6 156 1.32E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 Pfam PF07366 SnoaL-like polyketide cyclase 203 318 2.0E-9 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_22816 7b32e07c4f2ea8cbcd1efc04aac3cf07 339 Pfam PF07366 SnoaL-like polyketide cyclase 25 142 1.1E-13 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 SUPERFAMILY SSF55666 153 237 4.32E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 SUPERFAMILY SSF54211 1 181 8.1E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.756 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 Gene3D G3DSA:3.30.230.70 10 238 3.2E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.1E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_00840 07e397473d7e78580fe172a4509ad2fe 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEJY3_18456 08717b43d317d33976b892a759f3e104 286 Pfam PF00924 Mechanosensitive ion channel 66 267 1.5E-50 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_18456 08717b43d317d33976b892a759f3e104 286 Gene3D G3DSA:3.30.70.100 177 271 6.0E-24 T 14-10-2018 VEJY3_18456 08717b43d317d33976b892a759f3e104 286 SUPERFAMILY SSF82861 24 107 2.88E-10 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_18456 08717b43d317d33976b892a759f3e104 286 Gene3D G3DSA:2.30.30.60 124 173 2.1E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_18456 08717b43d317d33976b892a759f3e104 286 SUPERFAMILY SSF50182 108 174 3.92E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_18456 08717b43d317d33976b892a759f3e104 286 SUPERFAMILY SSF82689 179 278 4.05E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 Pfam PF11884 Domain of unknown function (DUF3404) 6 263 5.7E-110 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 SMART SM00388 264 331 4.2E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 SUPERFAMILY SSF47384 259 328 6.67E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 Gene3D G3DSA:1.10.287.130 271 328 1.1E-17 T 14-10-2018 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 SUPERFAMILY SSF55874 337 467 1.11E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 Gene3D G3DSA:3.30.565.10 329 464 1.1E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 320 1.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 SMART SM00387 369 467 3.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19786 fb6b3d5937a44caa199a412ddbd4816b 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 465 4.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02485 484111e9a5da98970022568f37d857fe 555 Gene3D G3DSA:3.40.50.300 1 285 1.9E-85 T 14-10-2018 VEJY3_02485 484111e9a5da98970022568f37d857fe 555 Pfam PF00005 ABC transporter 340 473 5.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02485 484111e9a5da98970022568f37d857fe 555 SMART SM00382 348 518 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02485 484111e9a5da98970022568f37d857fe 555 SMART SM00382 31 236 7.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02485 484111e9a5da98970022568f37d857fe 555 Gene3D G3DSA:3.40.50.300 286 555 1.0E-76 T 14-10-2018 VEJY3_02485 484111e9a5da98970022568f37d857fe 555 Pfam PF12848 ABC transporter 230 306 2.6E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain VEJY3_02485 484111e9a5da98970022568f37d857fe 555 Pfam PF00005 ABC transporter 22 191 2.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02485 484111e9a5da98970022568f37d857fe 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02485 484111e9a5da98970022568f37d857fe 555 SUPERFAMILY SSF52540 303 525 1.87E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02485 484111e9a5da98970022568f37d857fe 555 SUPERFAMILY SSF52540 9 242 1.71E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 PIRSF PIRSF005572 2 384 1.1E-138 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.675 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 SUPERFAMILY SSF53383 5 391 2.39E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-89 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.4E-230 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 Gene3D G3DSA:3.40.640.10 16 262 3.9E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_02725 834b98c95b7be16c75039d3e4dd78606 404 Gene3D G3DSA:3.90.1150.10 5 375 3.9E-169 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_14730 47b9b107fa7e2b1273ecc68ef35b825a 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 7.9E-79 T 14-10-2018 IPR007338 Protein of unknown function DUF416 VEJY3_14730 47b9b107fa7e2b1273ecc68ef35b825a 195 Gene3D G3DSA:1.20.1590.10 2 195 4.8E-68 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 SUPERFAMILY SSF52768 13 330 5.94E-84 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 PIRSF PIRSF036979 24 332 7.3E-28 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 Pfam PF00491 Arginase family 46 325 4.2E-62 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 Gene3D G3DSA:3.40.800.10 6 332 9.7E-131 T 14-10-2018 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.659 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 1.2E-114 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VEJY3_06155 823056b8071d4558f977748b79d7fd78 332 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 SUPERFAMILY SSF50331 238 368 2.11E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 SUPERFAMILY SSF52540 4 246 2.0E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 Gene3D G3DSA:3.40.50.300 3 223 5.0E-71 T 14-10-2018 VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 Pfam PF00005 ABC transporter 21 163 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 SMART SM00382 30 213 7.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 Gene3D G3DSA:2.40.50.940 224 361 6.3E-31 T 14-10-2018 VEJY3_04160 d7a17764ee64d58c3fddaa252724d28d 371 Gene3D G3DSA:2.40.50.140 293 352 6.3E-31 T 14-10-2018 VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 Gene3D G3DSA:2.20.150.10 15 110 6.9E-89 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 Pfam PF00294 pfkB family carbohydrate kinase 8 323 1.0E-45 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 Gene3D G3DSA:3.40.1190.20 10 313 6.9E-89 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 SUPERFAMILY SSF53613 5 329 9.82E-70 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 326 634 1.1E-142 T 14-10-2018 IPR018659 Protein of unknown function DUF2090 VEJY3_08630 5f508fbd79daf6dc82341c6a283b3879 635 Gene3D G3DSA:3.20.20.70 343 635 8.1E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 14-10-2018 IPR005824 KOW VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 Gene3D G3DSA:2.30.30.30 2 104 1.5E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.006 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 SUPERFAMILY SSF50104 4 101 2.14E-34 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 1.0E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01335 e1c9074d73aae2b6f4c41851c9368ddc 105 SMART SM00739 4 31 3.4E-4 T 14-10-2018 IPR005824 KOW VEJY3_19221 808b45e8fba7c350a93c10d85e8750aa 159 Gene3D G3DSA:3.90.960.10 3 150 5.8E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_19221 808b45e8fba7c350a93c10d85e8750aa 159 SUPERFAMILY SSF55826 5 147 1.83E-30 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_19221 808b45e8fba7c350a93c10d85e8750aa 159 Pfam PF04073 Aminoacyl-tRNA editing domain 36 141 5.5E-19 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 Gene3D G3DSA:3.40.50.20 1 114 2.6E-38 T 14-10-2018 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.8E-81 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 Pfam PF08443 RimK-like ATP-grasp domain 98 285 5.0E-64 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 Gene3D G3DSA:3.30.1490.20 115 181 2.3E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 50.446 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 Gene3D G3DSA:3.30.470.80 182 299 1.6E-39 T 14-10-2018 VEJY3_10420 c48ccddfdf6fa04bc659bc3a82fccc19 301 SUPERFAMILY SSF56059 98 288 1.1E-45 T 14-10-2018 VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 1.9E-36 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 Pfam PF04972 BON domain 101 149 6.8E-6 T 14-10-2018 IPR007055 BON domain VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 Pfam PF13629 Pilus formation protein N terminal region 28 97 8.3E-20 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 176 186 2.2E-10 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 2.2E-10 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 2.2E-10 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_12510 a411a6c8579486059ecb85c2c011a49b 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 2.2E-10 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 Gene3D G3DSA:3.40.190.10 163 268 1.7E-48 T 14-10-2018 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 Gene3D G3DSA:3.40.190.10 103 294 1.7E-48 T 14-10-2018 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 Gene3D G3DSA:1.10.10.10 7 91 3.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 SUPERFAMILY SSF53850 91 298 1.61E-33 T 14-10-2018 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 SUPERFAMILY SSF46785 10 80 9.31E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 Pfam PF03466 LysR substrate binding domain 91 298 9.0E-31 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.5E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.5E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04360 1e338f83dce9cae7e28ec31843adce80 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.5E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 SMART SM00420 9 61 2.0E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 2.7E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.9E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.9E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.4E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 SUPERFAMILY SSF46785 4 66 2.6E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 SMART SM01134 73 234 5.5E-56 T 14-10-2018 VEJY3_01735 1e3e7c9ca4260fb984e5f3df8cf2dbcd 253 SUPERFAMILY SSF100950 78 234 1.93E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:1.10.1240.10 650 738 8.3E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SUPERFAMILY SSF52242 746 895 2.09E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Pfam PF00809 Pterin binding enzyme 361 599 5.7E-59 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:3.10.196.10 909 1224 7.0E-146 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:3.20.20.330 2 341 3.6E-130 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SUPERFAMILY SSF51717 357 631 1.06E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SUPERFAMILY SSF82282 8 400 1.44E-119 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:3.20.20.20 342 643 2.0E-130 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 6.4E-82 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:1.10.288.10 938 1094 7.0E-146 T 14-10-2018 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SUPERFAMILY SSF56507 903 1225 1.83E-132 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Pfam PF02310 B12 binding domain 749 842 4.7E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 3.8E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SUPERFAMILY SSF47644 654 740 3.01E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 Gene3D G3DSA:3.40.50.280 745 896 4.0E-57 T 14-10-2018 VEJY3_13920 05423d194ff638fe4b1e31241a7aae0e 1226 SMART SM01018 658 741 2.0E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_19751 5b15c5141b445be667825cbd0a43a1a9 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.6E-52 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 VEJY3_19751 5b15c5141b445be667825cbd0a43a1a9 145 SUPERFAMILY SSF158675 1 145 9.81E-52 T 14-10-2018 IPR023132 Sama2622-like superfamily VEJY3_22416 e10ed8244669ee5b16bf10a0a5f6e29c 153 Gene3D G3DSA:1.20.5.830 111 153 1.1E-27 T 14-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily VEJY3_22416 e10ed8244669ee5b16bf10a0a5f6e29c 153 Gene3D G3DSA:1.10.10.60 2 60 4.1E-8 T 14-10-2018 VEJY3_22416 e10ed8244669ee5b16bf10a0a5f6e29c 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.2E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_22416 e10ed8244669ee5b16bf10a0a5f6e29c 153 Gene3D G3DSA:1.10.287.790 61 110 1.3E-23 T 14-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily VEJY3_22416 e10ed8244669ee5b16bf10a0a5f6e29c 153 SUPERFAMILY SSF46689 1 74 7.18E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_11555 c0b9da7e6de004a9fbe38327578c31d0 644 Pfam PF02120 Flagellar hook-length control protein FliK 514 597 3.3E-25 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VEJY3_11555 c0b9da7e6de004a9fbe38327578c31d0 644 Gene3D G3DSA:3.30.750.140 493 607 3.2E-31 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VEJY3_03350 1e1d8b86d67ec2ebd5c18c3baad5c4d1 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 9.8E-48 T 14-10-2018 IPR009912 Zinc-ribbon containing domain VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 Pfam PF00012 Hsp70 protein 82 321 1.8E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 PRINTS PR00301 70kDa heat shock protein signature 165 185 4.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 PRINTS PR00301 70kDa heat shock protein signature 403 423 4.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 PRINTS PR00301 70kDa heat shock protein signature 232 242 4.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 PRINTS PR00301 70kDa heat shock protein signature 6 19 4.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 SUPERFAMILY SSF53067 223 461 9.55E-20 T 14-10-2018 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 Pfam PF12531 DNA-K related protein 690 937 1.8E-101 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 VEJY3_07000 4dd96b0232ac1d3c4c4d9c27d5845bcd 940 SUPERFAMILY SSF53067 6 209 7.56E-30 T 14-10-2018 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 704 738 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 SUPERFAMILY SSF50182 675 740 5.23E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 SUPERFAMILY SSF82861 590 673 1.83E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 SUPERFAMILY SSF82689 743 842 1.23E-25 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 Pfam PF00924 Mechanosensitive ion channel 632 831 3.6E-56 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 Gene3D G3DSA:3.30.70.100 743 836 3.4E-21 T 14-10-2018 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 240 571 3.4E-40 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 VEJY3_21261 925e96ef534ae21ee82f5d3eaa09dc4e 843 Gene3D G3DSA:2.30.30.60 690 739 1.5E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SUPERFAMILY SSF47226 667 781 2.88E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SUPERFAMILY SSF55785 140 267 3.84E-25 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SUPERFAMILY SSF55874 336 506 3.14E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 2.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Pfam PF08448 PAS fold 162 271 9.8E-19 T 14-10-2018 IPR013656 PAS fold-4 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SMART SM00073 682 779 1.2E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:3.30.565.10 348 511 7.0E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:3.40.50.2300 514 644 9.0E-28 T 14-10-2018 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SMART SM00387 394 510 2.2E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SMART SM00448 527 638 4.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 PIRSF PIRSF003182 1 783 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SUPERFAMILY SSF47384 270 347 6.08E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Pfam PF01627 Hpt domain 694 764 1.6E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SMART SM00388 282 347 2.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SUPERFAMILY SSF52172 527 647 7.4E-26 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 SMART SM00091 155 221 1.2E-7 T 14-10-2018 IPR000014 PAS domain VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:1.10.287.970 1 89 4.2E-38 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:1.20.120.160 667 783 1.5E-26 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:3.30.450.20 150 267 3.1E-22 T 14-10-2018 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Gene3D G3DSA:1.10.287.130 268 345 1.3E-22 T 14-10-2018 VEJY3_02200 1cfc566e47465df4fc15a4f82d09fa0b 783 Pfam PF00072 Response regulator receiver domain 529 638 1.3E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_24161 45925f0897e57703ddfd9af2d40e5f2d 312 Pfam PF04616 Glycosyl hydrolases family 43 5 306 2.5E-61 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 VEJY3_24161 45925f0897e57703ddfd9af2d40e5f2d 312 SUPERFAMILY SSF75005 4 310 5.56E-63 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_24161 45925f0897e57703ddfd9af2d40e5f2d 312 PIRSF PIRSF025414 1 312 3.5E-127 T 14-10-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 VEJY3_24161 45925f0897e57703ddfd9af2d40e5f2d 312 Gene3D G3DSA:2.115.10.20 1 312 3.2E-87 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 Pfam PF00572 Ribosomal protein L13 15 138 2.5E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 PIRSF PIRSF002181 1 142 4.3E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEJY3_01975 b4367cbfde6eb74c78cfd6a73a0327d8 142 SUPERFAMILY SSF52161 1 140 1.24E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_10645 fb2d0184e52dce497beda783c486d9f8 538 SUPERFAMILY SSF55604 460 536 2.75E-15 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_10645 fb2d0184e52dce497beda783c486d9f8 538 Pfam PF02378 Phosphotransferase system, EIIC 10 363 1.3E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_10645 fb2d0184e52dce497beda783c486d9f8 538 Pfam PF00367 phosphotransferase system, EIIB 462 490 2.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_10645 fb2d0184e52dce497beda783c486d9f8 538 Gene3D G3DSA:3.30.1360.60 455 538 8.4E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_02250 0729516bd81426238015acfc6202f422 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEJY3_02250 0729516bd81426238015acfc6202f422 295 SUPERFAMILY SSF51658 12 287 1.31E-100 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_02250 0729516bd81426238015acfc6202f422 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEJY3_02250 0729516bd81426238015acfc6202f422 295 SMART SM00518 12 288 2.9E-121 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VEJY3_02250 0729516bd81426238015acfc6202f422 295 Gene3D G3DSA:3.20.20.150 10 291 2.4E-111 T 14-10-2018 VEJY3_02250 0729516bd81426238015acfc6202f422 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEJY3_02250 0729516bd81426238015acfc6202f422 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 9.0E-43 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_02250 0729516bd81426238015acfc6202f422 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.275 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 Gene3D G3DSA:3.40.50.1000 14 265 1.8E-72 T 14-10-2018 IPR023214 HAD superfamily VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 14-10-2018 VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 6.1E-67 T 14-10-2018 VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 SUPERFAMILY SSF56784 12 274 1.89E-65 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 Gene3D G3DSA:3.30.1240.10 91 195 1.8E-72 T 14-10-2018 VEJY3_15015 28541a8bcde21cd4177df3f71bfef95c 278 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 14-10-2018 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 6.0E-25 T 14-10-2018 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 SUPERFAMILY SSF55681 2 204 1.16E-70 T 14-10-2018 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 Gene3D G3DSA:3.30.930.10 1 203 1.5E-64 T 14-10-2018 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 5.0E-7 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.201 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEJY3_03295 6d39e4df49e277463e79e34c7ef13614 220 PIRSF PIRSF016262 1 216 1.4E-63 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEJY3_02840 c6637fa053007acd62ea0eeb238be138 437 Gene3D G3DSA:1.20.1250.20 28 435 2.7E-49 T 14-10-2018 VEJY3_02840 c6637fa053007acd62ea0eeb238be138 437 Pfam PF07690 Major Facilitator Superfamily 36 318 1.2E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_02840 c6637fa053007acd62ea0eeb238be138 437 SUPERFAMILY SSF103473 27 431 9.16E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Gene3D G3DSA:2.60.40.1080 755 834 1.1E-11 T 14-10-2018 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Gene3D G3DSA:2.60.40.1080 840 931 6.8E-12 T 14-10-2018 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Pfam PF07593 ASPIC and UnbV 682 746 4.0E-11 T 14-10-2018 IPR011519 ASPIC/UnbV VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SUPERFAMILY SSF69318 155 391 3.27E-25 T 14-10-2018 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 273 339 1.5E-7 T 14-10-2018 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 163 228 2.2E-6 T 14-10-2018 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SUPERFAMILY SSF49373 755 821 8.63E-10 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Pfam PF02368 Bacterial Ig-like domain (group 2) 758 821 6.0E-10 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 Pfam PF02368 Bacterial Ig-like domain (group 2) 844 914 4.9E-8 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SUPERFAMILY SSF49373 841 915 2.94E-10 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SMART SM00635 842 923 9.6E-4 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SMART SM00635 755 831 3.7E-7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VEJY3_09280 9aa544abb0687384d92488de1fea2690 1062 SUPERFAMILY SSF69318 531 662 4.05E-10 T 14-10-2018 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 SUPERFAMILY SSF53335 139 424 1.32E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Gene3D G3DSA:1.10.287.730 143 169 1.4E-14 T 14-10-2018 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Gene3D G3DSA:3.30.70.1170 170 227 1.8E-27 T 14-10-2018 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 1.1E-152 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Gene3D G3DSA:3.40.50.150 228 425 1.6E-70 T 14-10-2018 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 SUPERFAMILY SSF48013 1 146 8.76E-36 T 14-10-2018 IPR035926 NusB-like superfamily VEJY3_15330 9bd614412f95bae202aac8186284701d 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 8.2E-69 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Gene3D G3DSA:1.10.940.10 1 141 4.0E-44 T 14-10-2018 IPR035926 NusB-like superfamily VEJY3_15330 9bd614412f95bae202aac8186284701d 427 Pfam PF01029 NusB family 1 123 1.5E-23 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VEJY3_19056 54dcc66a8919cc74c56b5c6c3a4ce842 360 SMART SM00327 104 298 4.2E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_19056 54dcc66a8919cc74c56b5c6c3a4ce842 360 SUPERFAMILY SSF53300 102 300 2.82E-34 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_19056 54dcc66a8919cc74c56b5c6c3a4ce842 360 Pfam PF00092 von Willebrand factor type A domain 106 298 1.1E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_19056 54dcc66a8919cc74c56b5c6c3a4ce842 360 Gene3D G3DSA:3.40.50.410 104 305 2.2E-50 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_14265 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15240 d3ef27ed2a00b3f83558a9acf498508c 260 Gene3D G3DSA:3.40.50.720 4 258 4.0E-82 T 14-10-2018 VEJY3_15240 d3ef27ed2a00b3f83558a9acf498508c 260 SUPERFAMILY SSF69572 4 252 6.28E-72 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEJY3_15240 d3ef27ed2a00b3f83558a9acf498508c 260 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 11 216 4.1E-83 T 14-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VEJY3_15240 d3ef27ed2a00b3f83558a9acf498508c 260 Pfam PF00899 ThiF family 12 249 4.7E-57 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PIRSF PIRSF000044 1 407 5.7E-219 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Gene3D G3DSA:2.40.30.10 126 264 3.0E-53 T 14-10-2018 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 SUPERFAMILY SSF63380 105 272 5.62E-36 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.757 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 4.4E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Gene3D G3DSA:3.40.50.80 275 393 1.2E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 6.9E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 SUPERFAMILY SSF52343 258 402 7.33E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 4.9E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 115 1.0E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 Gene3D G3DSA:3.10.20.30 34 125 3.5E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_12210 7eeeafc78c7304a03d662ed8f5124546 407 SUPERFAMILY SSF54292 35 124 3.71E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_03425 900149fc055155d2c835c7e08d545d72 127 PIRSF PIRSF005610 1 121 4.8E-20 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VEJY3_03425 900149fc055155d2c835c7e08d545d72 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 8.6E-40 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VEJY3_06825 60abb6b5c8a3fcacd2185c51d01effee 202 Pfam PF02230 Phospholipase/Carboxylesterase 3 199 2.0E-38 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 VEJY3_06825 60abb6b5c8a3fcacd2185c51d01effee 202 SUPERFAMILY SSF53474 3 199 1.61E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_06825 60abb6b5c8a3fcacd2185c51d01effee 202 Gene3D G3DSA:3.40.50.1820 1 199 1.5E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_22776 4ea51a2e10db2a3bc50986c947a95d1c 430 Pfam PF07690 Major Facilitator Superfamily 22 373 1.0E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_22776 4ea51a2e10db2a3bc50986c947a95d1c 430 Gene3D G3DSA:1.20.1250.20 218 413 2.0E-22 T 14-10-2018 VEJY3_22776 4ea51a2e10db2a3bc50986c947a95d1c 430 Gene3D G3DSA:1.20.1250.20 13 214 3.2E-23 T 14-10-2018 VEJY3_22776 4ea51a2e10db2a3bc50986c947a95d1c 430 SUPERFAMILY SSF103473 12 413 6.67E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_24136 313482fefa89c575c43360b81bafe387 567 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 507 2.2E-34 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 SUPERFAMILY SSF53067 292 554 6.88E-48 T 14-10-2018 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 PIRSF PIRSF000538 8 561 3.2E-48 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 SUPERFAMILY SSF53067 10 290 7.33E-26 T 14-10-2018 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 Gene3D G3DSA:3.30.420.40 11 532 5.8E-122 T 14-10-2018 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 287 7.7E-16 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 Hamap MF_00520 Ribulokinase [araB]. 8 564 45.589 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 VEJY3_24136 313482fefa89c575c43360b81bafe387 567 Gene3D G3DSA:3.30.420.460 342 542 5.8E-122 T 14-10-2018 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 Gene3D G3DSA:3.20.20.70 1 216 6.0E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 Pfam PF13394 4Fe-4S single cluster domain 17 129 1.7E-11 T 14-10-2018 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 33.137 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 2.3E-111 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 PIRSF PIRSF000370 1 216 1.3E-68 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 SUPERFAMILY SSF102114 21 115 7.98E-7 T 14-10-2018 VEJY3_07770 d102f27d89f244a096b9a8cba96ff034 216 Pfam PF04055 Radical SAM superfamily 20 116 6.4E-7 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_18861 db4c45e5051af5b06300997d057aecea 362 Pfam PF04055 Radical SAM superfamily 21 150 2.4E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_18861 db4c45e5051af5b06300997d057aecea 362 SUPERFAMILY SSF102114 8 193 1.29E-23 T 14-10-2018 VEJY3_18861 db4c45e5051af5b06300997d057aecea 362 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 245 340 2.6E-11 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VEJY3_18861 db4c45e5051af5b06300997d057aecea 362 Gene3D G3DSA:3.30.420.130 229 353 2.6E-24 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_18861 db4c45e5051af5b06300997d057aecea 362 SUPERFAMILY SSF53146 231 349 4.19E-22 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 153 4.8E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 SUPERFAMILY SSF52540 10 277 1.35E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.806 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Gene3D G3DSA:3.40.50.300 72 379 1.1E-112 T 14-10-2018 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.3E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.7E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Gene3D G3DSA:3.40.50.300 110 275 1.1E-112 T 14-10-2018 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Gene3D G3DSA:3.30.70.3280 390 529 2.4E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 1.7E-299 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like VEJY3_12620 cb3a3e640aba7f1b830e39b7eb71b5c5 529 SUPERFAMILY SSF50447 262 393 3.53E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Gene3D G3DSA:3.30.750.80 396 487 3.5E-35 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.5E-61 T 14-10-2018 IPR000241 Putative RNA methylase domain VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Gene3D G3DSA:3.40.50.150 169 371 3.5E-136 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 3.2E-27 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 SUPERFAMILY SSF53335 140 371 2.53E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.548 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Pfam PF02926 THUMP domain 30 153 4.6E-13 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Gene3D G3DSA:3.30.2130.30 6 255 3.5E-136 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 Gene3D G3DSA:3.40.50.150 488 706 4.1E-74 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 PIRSF PIRSF037618 1 707 1.1E-296 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.8E-5 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.8E-5 T 14-10-2018 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 SMART SM00981 56 154 1.6E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VEJY3_07585 e985b5d4c7a9623fce0cce2178dcfd16 707 SUPERFAMILY SSF53335 399 707 1.26E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_19021 44c696375fbef0b2d315c36f908b466d 786 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 785 1.8E-299 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase VEJY3_06040 42731074394f9345375c486f02f90f62 319 Gene3D G3DSA:3.50.50.60 118 244 6.0E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06040 42731074394f9345375c486f02f90f62 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.5E-38 T 14-10-2018 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.5E-38 T 14-10-2018 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.5E-38 T 14-10-2018 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.5E-38 T 14-10-2018 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.5E-38 T 14-10-2018 VEJY3_06040 42731074394f9345375c486f02f90f62 319 SUPERFAMILY SSF51905 2 313 3.33E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06040 42731074394f9345375c486f02f90f62 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 5.0E-46 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 Gene3D G3DSA:3.50.50.60 10 312 6.0E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_06040 42731074394f9345375c486f02f90f62 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.7E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 SUPERFAMILY SSF100950 75 233 3.77E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_18266 197775563020a43b5072b392d29fabf3 257 Pfam PF00455 DeoR C terminal sensor domain 75 231 6.2E-47 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_18266 197775563020a43b5072b392d29fabf3 257 SMART SM01134 73 233 2.4E-58 T 14-10-2018 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 SUPERFAMILY SSF46785 5 59 2.18E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18266 197775563020a43b5072b392d29fabf3 257 SMART SM00420 6 58 6.0E-19 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.3E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_18266 197775563020a43b5072b392d29fabf3 257 Gene3D G3DSA:1.10.10.10 1 59 3.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20746 443f182864d46be899cc93c7ab81c574 335 SUPERFAMILY SSF143631 26 325 6.54E-80 T 14-10-2018 IPR003374 ApbE-like superfamily VEJY3_20746 443f182864d46be899cc93c7ab81c574 335 Gene3D G3DSA:3.10.520.20 17 335 3.5E-96 T 14-10-2018 VEJY3_20746 443f182864d46be899cc93c7ab81c574 335 Pfam PF02424 ApbE family 33 310 2.6E-75 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEJY3_20746 443f182864d46be899cc93c7ab81c574 335 PIRSF PIRSF006268 1 332 1.6E-83 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 TIGRFAM TIGR01230 agmatinase: agmatinase 24 299 6.5E-93 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 SUPERFAMILY SSF52768 12 303 3.78E-94 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 Pfam PF00491 Arginase family 33 297 3.6E-89 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 PIRSF PIRSF036979 12 304 6.2E-97 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_16331 17f53efbc59e7f1312b3a22d04289b87 308 Gene3D G3DSA:3.40.800.10 1 307 8.9E-105 T 14-10-2018 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 65 3.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 Pfam PF07702 UTRA domain 91 222 4.7E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 Gene3D G3DSA:1.10.10.10 1 65 5.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 SUPERFAMILY SSF64288 53 232 4.4E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 SMART SM00345 6 65 1.0E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 SMART SM00866 86 225 1.8E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 Gene3D G3DSA:3.40.1410.10 70 229 1.7E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 SUPERFAMILY SSF46785 2 76 3.82E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 7.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17006 4954301f4aeed53bd182399d46a88303 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 7.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07095 b9774c271da5075700927c3e9a14d6dc 288 Pfam PF03881 Fructosamine kinase 1 286 2.7E-125 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VEJY3_07095 b9774c271da5075700927c3e9a14d6dc 288 SUPERFAMILY SSF56112 4 282 2.38E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_07095 b9774c271da5075700927c3e9a14d6dc 288 Gene3D G3DSA:3.90.1200.10 98 288 1.5E-66 T 14-10-2018 VEJY3_07095 b9774c271da5075700927c3e9a14d6dc 288 PIRSF PIRSF006221 1 288 3.9E-108 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VEJY3_07095 b9774c271da5075700927c3e9a14d6dc 288 Gene3D G3DSA:3.30.200.20 1 93 9.1E-23 T 14-10-2018 VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.85 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 PIRSF PIRSF002122 3 156 1.0E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.9E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 SUPERFAMILY SSF47973 6 149 1.57E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_14170 ed4013b6aceaa91c52e057c898c02da5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.6E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 SMART SM00388 224 289 1.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 Gene3D G3DSA:3.30.565.10 300 425 2.5E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 SUPERFAMILY SSF55874 280 419 2.75E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 SUPERFAMILY SSF47384 207 289 1.82E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 419 6.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 SMART SM00387 333 423 3.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10370 78ef0131c43fe91ad1bdcd1e1a06ea36 426 Gene3D G3DSA:1.10.287.130 174 290 3.5E-20 T 14-10-2018 VEJY3_07515 6e7a755ed15ee514265e78f9adc23251 125 Gene3D G3DSA:2.30.29.50 4 125 1.0E-38 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily VEJY3_07515 6e7a755ed15ee514265e78f9adc23251 125 SUPERFAMILY SSF50729 10 124 1.05E-38 T 14-10-2018 VEJY3_07515 6e7a755ed15ee514265e78f9adc23251 125 Pfam PF08000 Bacterial PH domain 5 123 6.2E-39 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 159 5.0E-24 T 14-10-2018 VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_05410 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 Gene3D G3DSA:3.50.50.60 10 314 1.5E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 Gene3D G3DSA:1.10.10.1100 369 440 3.4E-23 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 312 3.8E-21 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.7E-15 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.7E-15 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 1.7E-15 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.7E-15 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 Gene3D G3DSA:3.50.50.60 123 263 1.5E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PIRSF PIRSF037495 2 468 2.3E-149 T 14-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 Pfam PF04324 BFD-like [2Fe-2S] binding domain 379 430 8.9E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 SUPERFAMILY SSF51905 7 330 1.02E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 2.0E-9 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.0E-9 T 14-10-2018 VEJY3_19441 0d31649f43b0623c13abdcf287919a53 486 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 2.0E-9 T 14-10-2018 VEJY3_06340 7c6e13f376eb3f975ecca3ae923c3ccb 347 Gene3D G3DSA:1.10.1610.10 12 345 8.2E-120 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEJY3_06340 7c6e13f376eb3f975ecca3ae923c3ccb 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.337 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEJY3_06340 7c6e13f376eb3f975ecca3ae923c3ccb 347 Pfam PF02277 Phosphoribosyltransferase 2 345 6.9E-125 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEJY3_06340 7c6e13f376eb3f975ecca3ae923c3ccb 347 SUPERFAMILY SSF52733 2 346 1.01E-110 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEJY3_06340 7c6e13f376eb3f975ecca3ae923c3ccb 347 Gene3D G3DSA:3.40.50.10210 50 328 8.2E-120 T 14-10-2018 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 178 313 7.0E-73 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 SUPERFAMILY SSF64383 177 309 4.18E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 307 22.718 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 177 304 1.0E-45 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 Gene3D G3DSA:3.30.1400.10 174 313 2.3E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VEJY3_03630 de915108dea19ae4f98f79fcf600a294 313 SMART SM00771 175 305 1.1E-71 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 SMART SM00342 183 266 9.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 SUPERFAMILY SSF46689 220 268 2.37E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 Gene3D G3DSA:1.10.10.60 168 269 8.3E-28 T 14-10-2018 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 SUPERFAMILY SSF51215 30 110 9.42E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 SUPERFAMILY SSF46689 170 216 2.24E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24296 0976266fb8f23043cac4948a172cfd47 270 Pfam PF12833 Helix-turn-helix domain 189 267 2.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_01110 ba797ae2a21ef50c34a7ca2ebac6ffe9 375 Pfam PF13439 Glycosyltransferase Family 4 17 182 9.7E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_01110 ba797ae2a21ef50c34a7ca2ebac6ffe9 375 Gene3D G3DSA:3.40.50.2000 192 359 6.1E-32 T 14-10-2018 VEJY3_01110 ba797ae2a21ef50c34a7ca2ebac6ffe9 375 Pfam PF00534 Glycosyl transferases group 1 191 353 1.1E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_01110 ba797ae2a21ef50c34a7ca2ebac6ffe9 375 SUPERFAMILY SSF53756 5 375 1.33E-58 T 14-10-2018 VEJY3_01110 ba797ae2a21ef50c34a7ca2ebac6ffe9 375 Gene3D G3DSA:3.40.50.2000 1 191 1.9E-20 T 14-10-2018 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 Gene3D G3DSA:3.30.420.40 158 321 1.2E-130 T 14-10-2018 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 Gene3D G3DSA:3.30.420.40 14 331 1.2E-130 T 14-10-2018 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 Gene3D G3DSA:3.90.640.10 190 263 1.2E-130 T 14-10-2018 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 14-10-2018 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 Pfam PF06723 MreB/Mbl protein 11 338 5.0E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_13795 1dc2ed2c3ab4064d9fb0f406aabcec97 347 SUPERFAMILY SSF53067 154 340 2.4E-50 T 14-10-2018 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 Gene3D G3DSA:3.90.220.20 243 388 1.0E-67 T 14-10-2018 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 SUPERFAMILY SSF116734 225 435 5.07E-38 T 14-10-2018 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 Gene3D G3DSA:3.90.220.20 5 434 1.0E-67 T 14-10-2018 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 Pfam PF01420 Type I restriction modification DNA specificity domain 76 190 8.1E-12 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 Pfam PF01420 Type I restriction modification DNA specificity domain 239 406 1.4E-8 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 SUPERFAMILY SSF116734 4 206 8.67E-35 T 14-10-2018 VEJY3_11785 2f76c93ad5a13b32179f2b00bb4239e7 436 Gene3D G3DSA:1.10.287.1120 158 431 1.0E-67 T 14-10-2018 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.8E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 Gene3D G3DSA:3.40.50.1370 135 292 3.9E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 7.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 7.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 7.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 7.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 9.9E-33 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.698 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 Gene3D G3DSA:3.40.50.1370 8 304 3.9E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_13615 8efff41d67e658c9c4ce8058a307c536 309 SUPERFAMILY SSF53671 4 307 8.77E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 4 514 3.1E-206 T 14-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 500 2.2E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 Gene3D G3DSA:3.30.1360.60 435 516 1.4E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 SUPERFAMILY SSF55604 440 514 4.45E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 453 470 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 Pfam PF00367 phosphotransferase system, EIIB 444 474 5.8E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_22821 ef29e8897d236a43508cf39b652b4322 516 Pfam PF02378 Phosphotransferase system, EIIC 10 341 8.0E-61 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 Gene3D G3DSA:1.10.287.610 103 150 5.6E-92 T 14-10-2018 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 Gene3D G3DSA:3.40.50.10490 8 219 5.6E-92 T 14-10-2018 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 Pfam PF00318 Ribosomal protein S2 9 224 2.6E-94 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 SUPERFAMILY SSF52313 6 232 4.45E-96 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.066 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_12075 aa1550e59049f2387c208f1eb7ab14e9 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 261 4.3E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 130 3.5E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 SUPERFAMILY SSF55347 135 307 8.5E-40 T 14-10-2018 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 Gene3D G3DSA:3.40.50.720 1 133 3.2E-31 T 14-10-2018 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 Gene3D G3DSA:3.30.360.10 136 372 2.8E-68 T 14-10-2018 VEJY3_21356 334e17a184b74696f3c646882f4e4667 373 SUPERFAMILY SSF51735 4 160 6.5E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01395 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 Pfam PF10996 Beta-Casp domain 244 374 4.7E-29 T 14-10-2018 IPR022712 Beta-Casp domain VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 Gene3D G3DSA:3.40.50.10890 212 400 2.6E-139 T 14-10-2018 VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 Pfam PF00753 Metallo-beta-lactamase superfamily 29 198 9.6E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 SUPERFAMILY SSF56281 6 443 1.57E-123 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 SMART SM01027 244 374 6.4E-58 T 14-10-2018 IPR022712 Beta-Casp domain VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 SMART SM00849 21 210 1.4E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 Gene3D G3DSA:3.60.15.10 14 435 2.6E-139 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_01185 f9b0e909fc7b879586a0318a03d496fd 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 442 5.8E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VEJY3_00200 59cd13a7482712fe2757df2996e77f28 241 Gene3D G3DSA:1.20.120.710 15 109 2.8E-57 T 14-10-2018 VEJY3_00200 59cd13a7482712fe2757df2996e77f28 241 SUPERFAMILY SSF56784 3 237 6.33E-42 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_00200 59cd13a7482712fe2757df2996e77f28 241 Gene3D G3DSA:3.40.50.1000 3 232 2.8E-57 T 14-10-2018 IPR023214 HAD superfamily VEJY3_00200 59cd13a7482712fe2757df2996e77f28 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 1.3E-19 T 14-10-2018 VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.4E-41 T 14-10-2018 IPR000160 GGDEF domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Pfam PF00563 EAL domain 427 661 9.4E-73 T 14-10-2018 IPR001633 EAL domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Gene3D G3DSA:3.30.450.20 3 126 2.2E-11 T 14-10-2018 VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SMART SM00091 131 198 0.35 T 14-10-2018 IPR000014 PAS domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SMART SM00091 8 74 0.032 T 14-10-2018 IPR000014 PAS domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SMART SM00267 242 410 1.1E-52 T 14-10-2018 IPR000160 GGDEF domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SUPERFAMILY SSF141868 427 674 2.75E-84 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 5.1E-7 T 14-10-2018 IPR000014 PAS domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Gene3D G3DSA:3.30.450.20 127 240 3.5E-6 T 14-10-2018 VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Gene3D G3DSA:3.20.20.450 423 675 1.4E-94 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Gene3D G3DSA:3.30.70.270 248 422 4.6E-49 T 14-10-2018 VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SUPERFAMILY SSF55785 5 115 2.74E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Pfam PF08448 PAS fold 15 119 3.4E-7 T 14-10-2018 IPR013656 PAS fold-4 VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SMART SM00052 420 666 6.5E-105 T 14-10-2018 IPR001633 EAL domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SUPERFAMILY SSF55785 115 206 1.24E-7 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.4E-34 T 14-10-2018 IPR000160 GGDEF domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 Pfam PF13188 PAS domain 133 180 2.1E-4 T 14-10-2018 IPR000014 PAS domain VEJY3_12645 94eaea9e16cc42c9e992992c191ff765 679 SUPERFAMILY SSF55073 258 412 1.02E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_02775 e163f5edc696c612a8377134352e99d9 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 4.9E-26 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 VEJY3_02775 e163f5edc696c612a8377134352e99d9 316 Gene3D G3DSA:1.10.260.40 7 116 1.3E-24 T 14-10-2018 VEJY3_02775 e163f5edc696c612a8377134352e99d9 316 Pfam PF13413 Helix-turn-helix domain 20 78 4.5E-19 T 14-10-2018 VEJY3_02775 e163f5edc696c612a8377134352e99d9 316 SUPERFAMILY SSF47413 14 82 2.82E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_02775 e163f5edc696c612a8377134352e99d9 316 SMART SM00530 19 80 5.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_00950 a0bf3941f52f654da8d13a4d8e36fedc 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 306 1.1E-74 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_00950 a0bf3941f52f654da8d13a4d8e36fedc 326 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 46.181 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VEJY3_00950 a0bf3941f52f654da8d13a4d8e36fedc 326 PIRSF PIRSF026649 12 314 2.2E-81 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_19416 08d18bf9c1c2ca363862467d5549089d 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 17 147 8.2E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 Pfam PF00034 Cytochrome c 133 201 3.1E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 SUPERFAMILY SSF46626 28 96 1.76E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 Gene3D G3DSA:1.10.760.10 118 201 2.2E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 PIRSF PIRSF000005 1 203 9.4E-62 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 SUPERFAMILY SSF46626 120 201 2.91E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10485 7ff1eab2c6151cd423717b11a2ac7e37 203 Gene3D G3DSA:1.10.760.10 26 96 2.5E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SUPERFAMILY SSF81301 36 171 2.73E-19 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Pfam PF01842 ACT domain 802 845 3.2E-8 T 14-10-2018 IPR002912 ACT domain VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SMART SM00471 447 594 1.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Pfam PF01909 Nucleotidyltransferase domain 56 138 4.6E-8 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Pfam PF01966 HD domain 452 581 1.8E-12 T 14-10-2018 IPR006674 HD domain VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SUPERFAMILY SSF81593 186 310 7.77E-10 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SUPERFAMILY SSF109604 418 562 7.22E-13 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Gene3D G3DSA:3.30.70.260 796 873 1.6E-5 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SUPERFAMILY SSF55021 797 862 1.15E-10 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 334.758 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Gene3D G3DSA:1.10.3210.10 435 581 2.4E-8 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 PIRSF PIRSF006288 7 873 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 SUPERFAMILY SSF55021 689 763 1.87E-8 T 14-10-2018 VEJY3_12085 d7c98623fb150c824ce467189d49c6b1 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.5E-35 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEJY3_12095 00c84b35da975d7c48e328813e28c6ea 258 SUPERFAMILY SSF55120 10 251 6.08E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_12095 00c84b35da975d7c48e328813e28c6ea 258 Gene3D G3DSA:3.30.2350.10 6 237 1.3E-61 T 14-10-2018 VEJY3_12095 00c84b35da975d7c48e328813e28c6ea 258 Pfam PF00849 RNA pseudouridylate synthase 24 183 6.9E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_12095 00c84b35da975d7c48e328813e28c6ea 258 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_14865 e8e99ecc3c223b4e5fe537c74ae3dfb0 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_14865 e8e99ecc3c223b4e5fe537c74ae3dfb0 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_14865 e8e99ecc3c223b4e5fe537c74ae3dfb0 213 Gene3D G3DSA:1.10.10.60 4 55 1.4E-23 T 14-10-2018 VEJY3_14865 e8e99ecc3c223b4e5fe537c74ae3dfb0 213 Gene3D G3DSA:1.10.357.10 56 210 1.3E-36 T 14-10-2018 VEJY3_14865 e8e99ecc3c223b4e5fe537c74ae3dfb0 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_08335 bf4c0c639f7ce56f8613340130cf105a 238 Pfam PF01925 Sulfite exporter TauE/SafE 9 232 6.7E-16 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 Pfam PF12833 Helix-turn-helix domain 2 63 1.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 16 58 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 Gene3D G3DSA:1.10.10.60 1 74 7.8E-20 T 14-10-2018 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 SUPERFAMILY SSF46689 15 65 1.08E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 31 46 4.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 46 62 4.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_07255 bcbe9ae8c0d0e4d40c91caa92730c5fd 78 SMART SM00342 2 62 9.0E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21866 4060f246b630f193e7db04d8f39d691f 237 Gene3D G3DSA:3.40.50.300 1 234 4.8E-73 T 14-10-2018 VEJY3_21866 4060f246b630f193e7db04d8f39d691f 237 SUPERFAMILY SSF52540 3 224 3.73E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21866 4060f246b630f193e7db04d8f39d691f 237 Pfam PF00005 ABC transporter 24 172 5.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21866 4060f246b630f193e7db04d8f39d691f 237 SMART SM00382 32 220 7.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21866 4060f246b630f193e7db04d8f39d691f 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 SMART SM00345 7 66 8.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 Gene3D G3DSA:3.40.640.10 138 357 2.2E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 SUPERFAMILY SSF53383 88 462 1.1E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 Gene3D G3DSA:1.10.10.10 1 68 4.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 SUPERFAMILY SSF46785 1 68 8.17E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 Pfam PF00155 Aminotransferase class I and II 143 458 3.9E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_10005 d1e437f5ad6e3da4ae8793416ae826a3 465 Gene3D G3DSA:3.90.1150.10 95 461 2.2E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 313 552 1.3E-60 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 Gene3D G3DSA:1.50.10.100 11 304 3.5E-58 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 32 273 5.1E-28 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 SUPERFAMILY SSF74650 309 564 6.28E-65 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 SUPERFAMILY SSF48230 4 326 2.38E-64 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 Gene3D G3DSA:2.60.220.10 560 666 7.5E-13 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 Gene3D G3DSA:2.70.98.10 310 559 9.3E-65 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_24021 6155c0ff835a8d0e91c25baf182e1342 672 SUPERFAMILY SSF49863 566 666 7.59E-12 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_21976 0f252b861a7d1810e0fae1b9853ddd99 210 PIRSF PIRSF006324 1 209 2.6E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_21976 0f252b861a7d1810e0fae1b9853ddd99 210 Pfam PF01810 LysE type translocator 16 205 1.2E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_02465 35b77e82e515c62c18a7a8577a27dcc0 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 284 4.7E-84 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_02465 35b77e82e515c62c18a7a8577a27dcc0 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.067 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_02465 35b77e82e515c62c18a7a8577a27dcc0 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VEJY3_02465 35b77e82e515c62c18a7a8577a27dcc0 327 SUPERFAMILY SSF51445 2 282 1.9E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_02465 35b77e82e515c62c18a7a8577a27dcc0 327 Gene3D G3DSA:3.20.20.300 1 327 2.4E-127 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.7E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 Gene3D G3DSA:1.20.210.10 52 552 8.0E-185 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 503 1.1E-132 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 SUPERFAMILY SSF81442 43 557 9.42E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20576 4de2ced04ce34dc6ac09734cb745c9d3 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_12445 fddcad92b7ba3975add9fdc8900b656f 379 Pfam PF02417 Chromate transporter 211 369 1.8E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEJY3_12445 fddcad92b7ba3975add9fdc8900b656f 379 Pfam PF02417 Chromate transporter 3 168 1.2E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEJY3_12445 fddcad92b7ba3975add9fdc8900b656f 379 PIRSF PIRSF004810 1 379 6.6E-116 T 14-10-2018 IPR014047 Chromate transporter, long chain VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.8E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.8E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 1.8E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 1.8E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 Pfam PF12697 Alpha/beta hydrolase family 24 253 5.9E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 Gene3D G3DSA:3.40.50.1820 2 261 3.8E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17871 e33488c7ba90afbdc8d7eae1c8bc48ee 262 SUPERFAMILY SSF53474 2 259 6.51E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 218 280 1.0E-10 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 184 3.1E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Gene3D G3DSA:3.90.1010.10 1 135 5.7E-52 T 14-10-2018 VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 PIRSF PIRSF000375 1 281 1.0E-116 T 14-10-2018 IPR016217 Nitrogen fixation, NifU VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 SUPERFAMILY SSF82649 2 131 5.23E-41 T 14-10-2018 VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Gene3D G3DSA:3.30.300.130 202 288 6.6E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Pfam PF01106 NifU-like domain 214 273 1.4E-17 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Gene3D G3DSA:1.10.10.1100 136 191 1.3E-6 T 14-10-2018 VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 SUPERFAMILY SSF117916 207 285 7.19E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEJY3_18741 0dff4e875048e3534ed65af5238da695 296 Pfam PF01592 NifU-like N terminal domain 4 125 1.1E-45 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 PIRSF PIRSF036918 1 608 2.8E-251 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Gene3D G3DSA:2.60.40.1180 521 606 1.2E-15 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Gene3D G3DSA:3.20.20.80 114 520 5.9E-135 T 14-10-2018 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 SUPERFAMILY SSF51011 527 607 2.78E-12 T 14-10-2018 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 SMART SM00642 126 518 1.9E-86 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 2.8E-77 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 SUPERFAMILY SSF81296 1 109 1.61E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 SUPERFAMILY SSF51445 114 527 3.13E-93 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 599 8.8E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 103 1.3E-6 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VEJY3_10800 920135004d23f5a41f9cedf2cb0241eb 608 Gene3D G3DSA:2.60.40.10 6 112 1.7E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 SUPERFAMILY SSF53383 4 420 7.97E-137 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 Pfam PF00202 Aminotransferase class-III 24 418 2.0E-130 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.148 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 PIRSF PIRSF000521 25 421 1.3E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 Gene3D G3DSA:3.40.640.10 58 327 4.4E-171 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05435 91b9d4bbad818eaf27d9f4206761b894 425 Gene3D G3DSA:3.90.1150.10 7 412 4.4E-171 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_10395 50114139127ce0bbfbe4a4ed54985afe 341 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 1.6E-47 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VEJY3_10395 50114139127ce0bbfbe4a4ed54985afe 341 PIRSF PIRSF029594 1 330 3.3E-95 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VEJY3_10395 50114139127ce0bbfbe4a4ed54985afe 341 Pfam PF13515 Fusaric acid resistance protein-like 182 313 1.0E-6 T 14-10-2018 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Gene3D G3DSA:3.40.50.1380 1 200 2.4E-88 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 PIRSF PIRSF000414 1 530 8.6E-230 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 SUPERFAMILY SSF53927 222 530 9.63E-131 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Gene3D G3DSA:3.40.140.20 219 375 1.8E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Pfam PF02142 MGS-like domain 19 132 1.4E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 4.4E-120 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Gene3D G3DSA:3.40.140.20 394 530 5.8E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 SMART SM00851 19 132 7.9E-62 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 SMART SM00798 137 462 1.9E-219 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 46.039 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_14705 32e6e0c48b71d12cb42c3b8e0d740c17 530 SUPERFAMILY SSF52335 7 197 2.22E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 SMART SM00988 1 65 7.5E-17 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 Pfam PF02814 UreE urease accessory protein, N-terminal domain 11 63 2.1E-14 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 Gene3D G3DSA:2.60.260.20 1 70 8.6E-18 T 14-10-2018 VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 Gene3D G3DSA:3.30.70.790 72 142 1.6E-28 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 139 21.448 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 157 2.3E-25 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 PIRSF PIRSF036402 2 159 1.4E-37 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 SUPERFAMILY SSF69287 1 70 1.1E-14 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily VEJY3_06885 3638d6e9770d50f415184fe999bd372b 162 SUPERFAMILY SSF69737 72 138 5.36E-19 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 270 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 Pfam PF12833 Helix-turn-helix domain 197 275 4.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 SUPERFAMILY SSF46689 228 276 2.33E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 Gene3D G3DSA:2.60.120.280 4 166 1.9E-60 T 14-10-2018 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 258 1.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 274 1.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 Gene3D G3DSA:1.10.10.60 174 233 6.1E-12 T 14-10-2018 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 Gene3D G3DSA:1.10.10.2730 234 276 3.7E-15 T 14-10-2018 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 SMART SM00342 191 274 4.8E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 SUPERFAMILY SSF46689 174 224 9.86E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 SUPERFAMILY SSF51215 5 161 1.83E-31 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_24151 1d7326f9084168f683e78a7df0fe1ab7 278 Pfam PF02311 AraC-like ligand binding domain 21 154 4.6E-20 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_16091 0f5b0c692771f78124dae71588188b53 214 Gene3D G3DSA:2.40.160.20 22 214 8.4E-81 T 14-10-2018 VEJY3_16091 0f5b0c692771f78124dae71588188b53 214 Pfam PF03922 OmpW family 24 214 4.7E-72 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 VEJY3_16091 0f5b0c692771f78124dae71588188b53 214 SUPERFAMILY SSF56925 23 214 9.94E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_08145 ba25d2a5815cb7c2f58ad31ba753e041 377 Pfam PF00196 Bacterial regulatory proteins, luxR family 317 368 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_08145 ba25d2a5815cb7c2f58ad31ba753e041 377 Gene3D G3DSA:1.10.10.10 241 376 3.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08145 ba25d2a5815cb7c2f58ad31ba753e041 377 SMART SM00421 314 371 4.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_08145 ba25d2a5815cb7c2f58ad31ba753e041 377 SUPERFAMILY SSF46894 310 373 1.02E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Pfam PF07731 Multicopper oxidase 365 455 1.1E-25 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 SUPERFAMILY SSF49503 157 276 2.11E-19 T 14-10-2018 IPR008972 Cupredoxin VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 ProSitePatterns PS00080 Multicopper oxidases signature 2. 441 452 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Gene3D G3DSA:2.60.40.420 15 151 1.2E-44 T 14-10-2018 IPR008972 Cupredoxin VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 SUPERFAMILY SSF49503 309 458 4.02E-33 T 14-10-2018 IPR008972 Cupredoxin VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Gene3D G3DSA:2.60.40.420 152 302 5.8E-22 T 14-10-2018 IPR008972 Cupredoxin VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Pfam PF07732 Multicopper oxidase 43 155 6.7E-39 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Gene3D G3DSA:2.60.40.420 307 459 3.2E-37 T 14-10-2018 IPR008972 Cupredoxin VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 Pfam PF00394 Multicopper oxidase 171 271 4.6E-8 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 VEJY3_15260 cc18d68c9a0a878d967a07be074059c0 459 SUPERFAMILY SSF49503 32 153 2.95E-38 T 14-10-2018 IPR008972 Cupredoxin VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 Gene3D G3DSA:3.30.60.20 144 189 8.1E-8 T 14-10-2018 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.858 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 Gene3D G3DSA:3.40.50.300 2 140 5.6E-24 T 14-10-2018 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 SUPERFAMILY SSF52540 2 141 1.15E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 SUPERFAMILY SSF57716 142 190 9.98E-17 T 14-10-2018 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 PIRSF PIRSF035805 1 192 7.7E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEJY3_05620 97bc2ede7b615ed9e353100b286910ba 192 Pfam PF00265 Thymidine kinase 2 186 4.9E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 SUPERFAMILY SSF46894 141 210 5.44E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 Gene3D G3DSA:3.40.50.2300 22 142 4.2E-24 T 14-10-2018 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 2.9E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 Gene3D G3DSA:1.10.10.10 144 214 7.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_13890 c4727c2262d2dc9d05ddd14c725021ed 214 SMART SM00421 151 208 1.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_04270 bc2e5f384c747f4d074880a109b0c753 264 SUPERFAMILY SSF53474 19 262 3.75E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04270 bc2e5f384c747f4d074880a109b0c753 264 Gene3D G3DSA:3.40.50.1820 12 261 1.6E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04270 bc2e5f384c747f4d074880a109b0c753 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 4.6E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_04270 bc2e5f384c747f4d074880a109b0c753 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 33.557 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 Pfam PF00483 Nucleotidyl transferase 1 253 1.2E-55 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 Pfam PF01050 Mannose-6-phosphate isomerase 281 430 5.4E-65 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 Gene3D G3DSA:3.90.550.10 1 317 3.1E-102 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 SUPERFAMILY SSF51182 151 430 1.33E-85 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 Gene3D G3DSA:2.60.120.10 324 425 3.4E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_01155 0c0f07bbfd6319f8ed6c88097807c51d 436 SUPERFAMILY SSF53448 1 247 1.47E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 Gene3D G3DSA:3.40.50.2020 7 302 1.2E-135 T 14-10-2018 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 Gene3D G3DSA:3.40.50.2020 148 290 1.2E-135 T 14-10-2018 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 SUPERFAMILY SSF53271 69 306 5.23E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.1E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.743 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VEJY3_03395 90a441fc44f8b5dcfd2e52e9aab95ad4 314 SMART SM01400 4 121 2.6E-77 T 14-10-2018 VEJY3_07525 61ba133734bae533442846e299032d54 160 Pfam PF13673 Acetyltransferase (GNAT) domain 38 150 2.6E-18 T 14-10-2018 IPR000182 GNAT domain VEJY3_07525 61ba133734bae533442846e299032d54 160 Gene3D G3DSA:3.40.630.30 1 158 9.1E-31 T 14-10-2018 VEJY3_07525 61ba133734bae533442846e299032d54 160 SUPERFAMILY SSF55729 2 144 1.74E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 260 2.3E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 Gene3D G3DSA:3.40.930.10 1 156 3.0E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 SUPERFAMILY SSF55804 1 150 1.83E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 7.7E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 287 626 6.5E-81 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 169 253 1.0E-25 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 Pfam PF02378 Phosphotransferase system, EIIC 297 515 1.9E-8 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 Gene3D G3DSA:3.40.50.2300 157 267 2.4E-36 T 14-10-2018 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 1.1E-37 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VEJY3_09110 e5e280a26ea6edc1301ddbf70feab60b 644 SUPERFAMILY SSF52794 168 264 1.36E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 SUPERFAMILY SSF52540 334 571 3.2E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 Pfam PF00005 ABC transporter 352 500 9.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 Gene3D G3DSA:3.40.50.300 335 580 9.9E-75 T 14-10-2018 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 Gene3D G3DSA:1.20.1560.10 3 319 4.0E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 Pfam PF00664 ABC transporter transmembrane region 21 291 2.8E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 SUPERFAMILY SSF90123 7 320 3.4E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06955 1e4d1944e86564adbe138f0ab0f82776 580 SMART SM00382 361 547 4.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_19491 831242560071228580e37c921b6db73c 300 Pfam PF03466 LysR substrate binding domain 89 289 3.4E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19491 831242560071228580e37c921b6db73c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 6.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19491 831242560071228580e37c921b6db73c 300 SUPERFAMILY SSF46785 3 112 4.43E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19491 831242560071228580e37c921b6db73c 300 Gene3D G3DSA:3.40.190.10 163 264 1.2E-66 T 14-10-2018 VEJY3_19491 831242560071228580e37c921b6db73c 300 Gene3D G3DSA:1.10.10.10 3 86 2.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19491 831242560071228580e37c921b6db73c 300 SUPERFAMILY SSF53850 89 296 5.43E-43 T 14-10-2018 VEJY3_19491 831242560071228580e37c921b6db73c 300 Gene3D G3DSA:3.40.190.10 91 289 1.2E-66 T 14-10-2018 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 Gene3D G3DSA:3.40.50.2300 161 290 2.5E-64 T 14-10-2018 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 Pfam PF13377 Periplasmic binding protein-like domain 169 330 1.9E-31 T 14-10-2018 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 Gene3D G3DSA:3.40.50.2300 60 303 2.5E-64 T 14-10-2018 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 SUPERFAMILY SSF53822 61 331 3.61E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 SMART SM00354 1 71 1.0E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 SUPERFAMILY SSF47413 1 57 3.94E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_17231 3f624f1ea312548540029119f14b1f16 334 Gene3D G3DSA:1.10.260.40 3 58 1.3E-24 T 14-10-2018 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 SMART SM00354 9 65 9.9E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 Gene3D G3DSA:1.10.260.40 1 53 5.5E-15 T 14-10-2018 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 2.2E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 SUPERFAMILY SSF53822 72 324 4.0E-25 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 SUPERFAMILY SSF47413 8 58 5.25E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 14-10-2018 VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 Pfam PF13407 Periplasmic binding protein domain 124 321 6.6E-19 T 14-10-2018 IPR025997 Periplasmic binding protein VEJY3_08665 c2023ca8a0d693a0027953bcbd191172 346 Gene3D G3DSA:3.40.50.2300 177 322 1.9E-24 T 14-10-2018 VEJY3_19991 8845ad90de2f31fba50a8ee7c0a4e68f 185 SUPERFAMILY SSF82057 117 184 2.43E-20 T 14-10-2018 VEJY3_19991 8845ad90de2f31fba50a8ee7c0a4e68f 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 6.8E-11 T 14-10-2018 IPR013987 PhnA protein, N-terminal VEJY3_19991 8845ad90de2f31fba50a8ee7c0a4e68f 185 Pfam PF03831 PhnA domain 119 185 1.3E-22 T 14-10-2018 IPR013988 PhnA protein, C-terminal VEJY3_19991 8845ad90de2f31fba50a8ee7c0a4e68f 185 Gene3D G3DSA:2.30.30.40 115 185 4.7E-24 T 14-10-2018 VEJY3_19991 8845ad90de2f31fba50a8ee7c0a4e68f 185 SMART SM00782 6 52 1.6E-29 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 SUPERFAMILY SSF52777 166 379 7.56E-57 T 14-10-2018 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Gene3D G3DSA:3.30.559.10 176 381 8.5E-52 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 SUPERFAMILY SSF51230 2 87 2.09E-25 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Gene3D G3DSA:4.10.320.10 126 165 1.5E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 380 4.1E-57 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Pfam PF00364 Biotin-requiring enzyme 3 75 9.8E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Pfam PF02817 e3 binding domain 129 161 2.1E-10 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 SUPERFAMILY SSF47005 122 164 1.96E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_20336 097828bcf82e5eeae7b60debf9d2466d 382 Gene3D G3DSA:2.40.50.100 1 87 9.3E-24 T 14-10-2018 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 SMART SM01274 26 159 6.6E-74 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 SUPERFAMILY SSF51735 171 418 6.4E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 Pfam PF00390 Malic enzyme, N-terminal domain 36 122 6.9E-20 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 ProSitePatterns PS00331 Malic enzymes signature. 167 183 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 SUPERFAMILY SSF53223 18 169 3.81E-52 T 14-10-2018 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 Gene3D G3DSA:3.40.50.10380 4 168 4.2E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 PIRSF PIRSF000106 51 423 6.8E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 SMART SM00919 171 407 1.7E-141 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 Pfam PF03949 Malic enzyme, NAD binding domain 173 364 1.0E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEJY3_14145 f2d9e089c43198bc0f7cb5448a5624b1 423 Gene3D G3DSA:3.40.50.720 169 423 1.1E-83 T 14-10-2018 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Gene3D G3DSA:2.160.20.60 1201 1468 1.2E-100 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.1E-101 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.7E-153 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 SUPERFAMILY SSF51395 434 1191 6.11E-252 T 14-10-2018 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.7E-178 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Pfam PF01493 GXGXG motif 1236 1419 5.0E-74 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 SUPERFAMILY SSF56235 13 428 2.16E-148 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 SUPERFAMILY SSF69336 1214 1464 3.53E-87 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEJY3_02180 acb3c09aaeaa794d37dea118ca3ddbeb 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 SMART SM00091 12 78 0.0013 T 14-10-2018 IPR000014 PAS domain VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 Pfam PF00989 PAS fold 16 134 5.4E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 Gene3D G3DSA:3.30.450.20 11 143 8.6E-31 T 14-10-2018 VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 2.4E-44 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 SUPERFAMILY SSF55073 161 319 2.28E-49 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 Gene3D G3DSA:3.30.70.270 150 319 1.8E-56 T 14-10-2018 VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 SMART SM00267 145 317 7.5E-55 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07105 4af7e502289f44de2d9c61ed93f3dab6 320 SUPERFAMILY SSF55785 13 95 9.95E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_05990 f4197fe2288c04ff5e8079efa69d7c0c 306 SUPERFAMILY SSF109604 24 299 2.23E-40 T 14-10-2018 VEJY3_05990 f4197fe2288c04ff5e8079efa69d7c0c 306 Gene3D G3DSA:1.10.3210.10 19 300 5.9E-37 T 14-10-2018 VEJY3_05990 f4197fe2288c04ff5e8079efa69d7c0c 306 Pfam PF08668 HDOD domain 39 233 1.2E-37 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 SUPERFAMILY SSF50156 89 186 3.55E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 Gene3D G3DSA:2.30.42.10 126 221 2.2E-31 T 14-10-2018 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 Pfam PF02163 Peptidase family M50 11 440 5.3E-87 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 Gene3D G3DSA:2.30.42.10 222 311 4.0E-21 T 14-10-2018 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 SUPERFAMILY SSF50156 209 294 1.58E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 SMART SM00228 115 186 0.52 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 SMART SM00228 212 281 1.5E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_12040 cbde20d2a3c47744bdbeb935dacad873 452 Pfam PF13180 PDZ domain 223 288 3.1E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Gene3D G3DSA:1.10.10.60 473 532 4.3E-10 T 14-10-2018 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 SMART SM00382 224 367 4.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Pfam PF02954 Bacterial regulatory protein, Fis family 489 523 1.2E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 SUPERFAMILY SSF55781 8 167 1.04E-18 T 14-10-2018 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 416 425 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 491 508 3.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 508 528 3.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 SMART SM00065 30 181 1.4E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Gene3D G3DSA:3.40.50.300 191 374 4.7E-69 T 14-10-2018 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Pfam PF00158 Sigma-54 interaction domain 204 370 4.1E-72 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 228 241 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Gene3D G3DSA:1.10.8.60 375 441 8.6E-22 T 14-10-2018 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Pfam PF13185 GAF domain 36 167 2.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 Gene3D G3DSA:3.30.450.40 10 183 6.8E-31 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_18866 55bd5681a08977781bd497f7d25dd751 532 SUPERFAMILY SSF52540 204 444 1.69E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 Gene3D G3DSA:3.10.105.10 272 519 4.3E-194 T 14-10-2018 VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 1.7E-73 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 SUPERFAMILY SSF53850 42 544 1.41E-106 T 14-10-2018 VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 Gene3D G3DSA:3.40.190.10 46 543 4.3E-194 T 14-10-2018 VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 PIRSF PIRSF002741 5 543 8.2E-67 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_12815 a77ea4ee6a3d1f4a9abff67717aa1d68 560 Gene3D G3DSA:3.90.76.10 66 172 4.3E-194 T 14-10-2018 VEJY3_24126 c81ea9cec8753787838df024627aec59 505 SUPERFAMILY SSF52540 7 231 2.51E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24126 c81ea9cec8753787838df024627aec59 505 Gene3D G3DSA:3.40.50.300 1 245 3.4E-58 T 14-10-2018 VEJY3_24126 c81ea9cec8753787838df024627aec59 505 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_24126 c81ea9cec8753787838df024627aec59 505 Pfam PF00005 ABC transporter 274 427 9.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24126 c81ea9cec8753787838df024627aec59 505 SUPERFAMILY SSF52540 273 489 8.56E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24126 c81ea9cec8753787838df024627aec59 505 SMART SM00382 32 228 1.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24126 c81ea9cec8753787838df024627aec59 505 SMART SM00382 281 476 8.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24126 c81ea9cec8753787838df024627aec59 505 Pfam PF00005 ABC transporter 23 172 3.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24126 c81ea9cec8753787838df024627aec59 505 Gene3D G3DSA:3.40.50.300 265 496 4.8E-39 T 14-10-2018 VEJY3_06330 ef896a575fdb6e2d421f20741143391c 229 Gene3D G3DSA:3.40.50.720 1 227 6.9E-51 T 14-10-2018 VEJY3_06330 ef896a575fdb6e2d421f20741143391c 229 Pfam PF13460 NAD(P)H-binding 11 160 3.2E-9 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_06330 ef896a575fdb6e2d421f20741143391c 229 SUPERFAMILY SSF51735 3 215 1.2E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 Gene3D G3DSA:3.10.450.50 6 145 1.3E-19 T 14-10-2018 VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 Pfam PF07366 SnoaL-like polyketide cyclase 198 313 2.9E-11 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 Pfam PF07366 SnoaL-like polyketide cyclase 10 137 5.9E-7 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 SUPERFAMILY SSF54427 175 321 7.87E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 SUPERFAMILY SSF54427 7 147 5.2E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22871 28aeeaec83120b97b2c1e1cf2f77ab0d 331 Gene3D G3DSA:3.10.450.50 175 322 2.2E-30 T 14-10-2018 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 SUPERFAMILY SSF57770 147 181 4.32E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Gene3D G3DSA:2.40.50.140 580 691 2.9E-34 T 14-10-2018 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.632 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Pfam PF01588 Putative tRNA binding domain 596 688 6.5E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Gene3D G3DSA:2.20.28.20 147 181 7.4E-162 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Gene3D G3DSA:3.40.50.620 13 389 7.4E-162 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 SUPERFAMILY SSF47323 394 552 2.18E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 SUPERFAMILY SSF52374 11 392 8.7E-101 T 14-10-2018 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Gene3D G3DSA:1.10.730.10 394 531 1.7E-35 T 14-10-2018 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 SUPERFAMILY SSF50249 590 690 4.9E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 Pfam PF09334 tRNA synthetases class I (M) 13 401 2.0E-165 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_10760 f5e1b94cf4ca6677439dd5697d52859c 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 SUPERFAMILY SSF48179 168 291 1.25E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 PIRSF PIRSF000103 1 293 3.3E-57 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 SUPERFAMILY SSF51735 6 166 6.7E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 3.1E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 6.0E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 Gene3D G3DSA:1.10.1040.10 168 292 3.5E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_18271 2f3b0427b03bd01a81825e5abf94f7fe 299 Gene3D G3DSA:3.40.50.720 2 167 7.4E-41 T 14-10-2018 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Gene3D G3DSA:3.30.70.2120 173 275 3.5E-76 T 14-10-2018 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Gene3D G3DSA:1.10.8.410 328 376 3.6E-21 T 14-10-2018 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 SUPERFAMILY SSF64518 1 376 1.96E-98 T 14-10-2018 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Gene3D G3DSA:1.20.1330.10 44 327 3.5E-76 T 14-10-2018 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 9.7E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.4E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11635 bdb39d69591f7c06c36b99159a2111bf 377 Pfam PF07196 Flagellin hook IN motif 195 249 3.2E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 5.3E-65 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 Gene3D G3DSA:1.10.10.1710 448 514 4.0E-25 T 14-10-2018 VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 SUPERFAMILY SSF48173 229 500 4.58E-62 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 Gene3D G3DSA:1.10.579.10 327 447 4.2E-53 T 14-10-2018 VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 Gene3D G3DSA:1.25.40.80 132 323 3.2E-97 T 14-10-2018 VEJY3_16436 a0dc9d696dba237e674c3f2c868c837a 514 Gene3D G3DSA:3.40.50.620 8 230 3.2E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 Gene3D G3DSA:3.40.50.2000 8 481 8.7E-158 T 14-10-2018 VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 Pfam PF00534 Glycosyl transferases group 1 299 446 2.1E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.459 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 SUPERFAMILY SSF53756 4 485 2.48E-110 T 14-10-2018 VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 Gene3D G3DSA:3.40.50.2000 256 467 8.7E-158 T 14-10-2018 VEJY3_04760 fc0ab92425ae19ba4a4a4aaffb8eed8e 490 Pfam PF08323 Starch synthase catalytic domain 8 239 3.7E-68 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 Pfam PF00549 CoA-ligase 151 270 7.8E-22 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 SMART SM00881 4 100 6.0E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 PIRSF PIRSF001553 1 289 9.0E-135 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.499 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 Gene3D G3DSA:3.40.50.261 124 288 5.3E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 14-10-2018 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 14-10-2018 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 14-10-2018 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 14-10-2018 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 SUPERFAMILY SSF52210 123 285 6.41E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03870 e5e8245b765ab2bea62aa770428f822d 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.70.1440 650 846 4.1E-229 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.70.1430 551 647 4.1E-229 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.2090.10 180 274 4.1E-229 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.1E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 2.1E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.1E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 7.2E-152 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82693 41 134 4.19E-17 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:1.20.1640.10 507 998 4.1E-229 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82693 139 326 2.14E-14 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.70.1320 137 332 4.1E-229 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82714 185 271 2.88E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.2090.10 701 788 4.1E-229 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82866 784 1004 3.4E-44 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82693 550 600 2.88E-7 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:1.20.1640.10 13 506 4.1E-229 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82714 707 781 3.53E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 SUPERFAMILY SSF82866 300 495 4.19E-32 T 14-10-2018 VEJY3_16906 7a2f4e6040352bd833682ade97618e30 1020 Gene3D G3DSA:3.30.70.1430 41 796 4.1E-229 T 14-10-2018 VEJY3_21306 e75fd8ca76ed037d52c82aba53e76104 393 Gene3D G3DSA:2.40.160.50 109 391 1.4E-14 T 14-10-2018 VEJY3_21306 e75fd8ca76ed037d52c82aba53e76104 393 Pfam PF01103 Surface antigen 107 393 3.9E-14 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VEJY3_20091 76c5ef096a2c945ff918a1eb4d436815 434 SUPERFAMILY SSF53613 34 417 3.96E-47 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_20091 76c5ef096a2c945ff918a1eb4d436815 434 Gene3D G3DSA:3.40.1190.20 33 418 6.1E-46 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_20091 76c5ef096a2c945ff918a1eb4d436815 434 Pfam PF00294 pfkB family carbohydrate kinase 138 302 5.5E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_09155 2bd1c370f96bfc60691d8f275ca955c0 952 Gene3D G3DSA:2.60.120.430 232 420 3.8E-53 T 14-10-2018 VEJY3_09155 2bd1c370f96bfc60691d8f275ca955c0 952 Gene3D G3DSA:2.60.120.430 42 172 1.8E-7 T 14-10-2018 VEJY3_09155 2bd1c370f96bfc60691d8f275ca955c0 952 Gene3D G3DSA:3.20.20.80 423 950 5.9E-189 T 14-10-2018 VEJY3_09155 2bd1c370f96bfc60691d8f275ca955c0 952 SUPERFAMILY SSF51445 595 937 1.22E-26 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09155 2bd1c370f96bfc60691d8f275ca955c0 952 Pfam PF02449 Beta-galactosidase 659 842 1.2E-8 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 1.3E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 1.3E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 SMART SM00283 401 662 1.5E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 SMART SM00304 334 386 4.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 629 3.9E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 SUPERFAMILY SSF58104 354 663 1.24E-72 T 14-10-2018 VEJY3_04460 839e9f60bb6601bbc22030fdfc94f0a0 663 Gene3D G3DSA:1.10.287.950 334 663 2.3E-70 T 14-10-2018 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 66 342 3.1E-42 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 SMART SM01217 737 808 1.5E-24 T 14-10-2018 IPR026891 Fibronectin type III-like domain VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Gene3D G3DSA:2.60.40.10 708 828 9.6E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Gene3D G3DSA:3.20.20.300 37 350 2.1E-101 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 376 697 2.7E-35 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 SUPERFAMILY SSF51445 31 375 2.0E-81 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Pfam PF14310 Fibronectin type III-like domain 737 808 6.7E-20 T 14-10-2018 IPR026891 Fibronectin type III-like domain VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 199 215 2.8E-31 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 122 141 2.8E-31 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 168 184 2.8E-31 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 89 105 2.8E-31 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 269 287 2.8E-31 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 Gene3D G3DSA:3.40.50.1700 360 699 1.5E-74 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_18651 f3a8faca51f20a32b5994452874ceea1 852 SUPERFAMILY SSF52279 376 700 7.45E-34 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 PIRSF PIRSF034834 1 182 3.5E-66 T 14-10-2018 IPR011238 Polyhedral organelle shell protein PduT VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 Gene3D G3DSA:3.30.70.1710 3 79 9.8E-26 T 14-10-2018 VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 Gene3D G3DSA:3.30.70.1710 80 182 1.5E-32 T 14-10-2018 VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 SUPERFAMILY SSF143414 3 89 2.62E-21 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 96 158 2.0E-20 T 14-10-2018 VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 60 3.0E-17 T 14-10-2018 VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 SUPERFAMILY SSF143414 95 181 3.66E-22 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 SMART SM00877 95 173 7.4E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 SMART SM00877 3 77 8.0E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 Pfam PF00936 BMC domain 5 75 4.0E-20 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08455 5cda21e7bc9cd66db78ce8e2e24088dc 182 Pfam PF00936 BMC domain 96 173 5.5E-21 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 Gene3D G3DSA:1.10.260.40 2 60 3.9E-21 T 14-10-2018 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 Gene3D G3DSA:3.40.50.2300 163 279 4.5E-65 T 14-10-2018 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 9.0E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 SUPERFAMILY SSF53822 63 305 2.36E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 Gene3D G3DSA:3.40.50.2300 68 303 4.5E-65 T 14-10-2018 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 SMART SM00354 4 74 1.7E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 Pfam PF13377 Periplasmic binding protein-like domain 168 303 1.9E-16 T 14-10-2018 VEJY3_03265 172b83a87587e1f7bf62f3f49a5481c8 317 SUPERFAMILY SSF47413 3 60 1.94E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 Pfam PF00664 ABC transporter transmembrane region 27 293 3.2E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 Gene3D G3DSA:1.20.1560.10 2 328 1.2E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 SMART SM00382 368 555 4.2E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 Gene3D G3DSA:3.40.50.300 329 581 2.3E-95 T 14-10-2018 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 Pfam PF00005 ABC transporter 359 509 1.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 SUPERFAMILY SSF52540 331 580 2.02E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04545 812d3d65d611c85222b81397e153bebc 582 SUPERFAMILY SSF90123 14 327 5.89E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_02545 beac05aef181a4383ee870927cd64d5a 260 Gene3D G3DSA:1.10.3720.10 51 248 2.5E-24 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02545 beac05aef181a4383ee870927cd64d5a 260 SUPERFAMILY SSF161098 56 238 3.27E-29 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02545 beac05aef181a4383ee870927cd64d5a 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 246 6.6E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 Gene3D G3DSA:3.40.190.10 93 303 1.4E-97 T 14-10-2018 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 Gene3D G3DSA:3.40.190.10 167 267 1.4E-97 T 14-10-2018 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 SUPERFAMILY SSF46785 1 113 8.71E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 Gene3D G3DSA:1.10.10.10 1 86 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 2.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 SUPERFAMILY SSF53850 91 322 4.05E-40 T 14-10-2018 VEJY3_05395 163916b8250213787dbf9fdd7cc3055f 324 Pfam PF03466 LysR substrate binding domain 91 292 6.4E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 SUPERFAMILY SSF48179 282 484 7.48E-53 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 25 187 1.7E-41 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 459 4.6E-78 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 Gene3D G3DSA:3.40.50.720 8 280 1.7E-99 T 14-10-2018 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 SUPERFAMILY SSF51735 13 280 2.36E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 PRINTS PR00084 Mannitol dehydrogenase signature 26 36 1.5E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 1.5E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 1.5E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 1.5E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_09385 d7972989ce24a76e7c5e9990a5232373 486 Gene3D G3DSA:1.10.1040.10 281 486 7.0E-62 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_18056 0dc85b62942ad293c25504d4a870c786 333 Gene3D G3DSA:3.40.190.170 25 333 7.0E-95 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_18056 0dc85b62942ad293c25504d4a870c786 333 PIRSF PIRSF006470 1 331 3.2E-89 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEJY3_18056 0dc85b62942ad293c25504d4a870c786 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 311 1.9E-76 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Pfam PF13493 Domain of unknown function (DUF4118) 13 118 3.2E-20 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 340 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 6.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 297 6.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 339 6.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 6.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 SUPERFAMILY SSF55874 180 340 9.69E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Gene3D G3DSA:1.10.287.130 114 189 5.7E-13 T 14-10-2018 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Gene3D G3DSA:3.30.565.10 190 346 1.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 SUPERFAMILY SSF47384 110 190 5.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 SMART SM00388 122 190 5.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Gene3D G3DSA:1.20.120.620 9 113 4.1E-16 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 SMART SM00387 232 342 2.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_20736 a62fe3542de33e4562651fe54ae24e3f 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 190 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 SUPERFAMILY SSF52518 374 567 1.9E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 5.2E-46 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Gene3D G3DSA:3.40.50.1220 192 362 4.8E-60 T 14-10-2018 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 SUPERFAMILY SSF52467 191 364 1.83E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Gene3D G3DSA:3.40.50.970 1 183 3.7E-72 T 14-10-2018 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 5.9E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 SUPERFAMILY SSF52518 2 181 1.1E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 9.1E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEJY3_01720 67a9e529cb4c1f748d95f9823980b753 574 Gene3D G3DSA:3.40.50.970 365 574 2.8E-65 T 14-10-2018 VEJY3_12820 222f4588f35ba79d817556a044fbc964 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 1.4E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_12820 222f4588f35ba79d817556a044fbc964 328 Gene3D G3DSA:1.10.3720.10 87 326 2.5E-18 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12820 222f4588f35ba79d817556a044fbc964 328 SUPERFAMILY SSF161098 93 307 8.5E-15 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 SMART SM00421 219 276 1.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 Gene3D G3DSA:1.10.10.10 193 283 3.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 252 4.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 252 264 4.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 236 4.7E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 SUPERFAMILY SSF46894 212 279 3.4E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_16931 c13f95e58b9afbdb34d88912dc564e3a 285 Pfam PF00196 Bacterial regulatory proteins, luxR family 221 274 5.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_00085 779825d9ab1f162569b6c8690088580a 417 SUPERFAMILY SSF53383 13 411 9.52E-64 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_00085 779825d9ab1f162569b6c8690088580a 417 Gene3D G3DSA:3.40.640.10 1 416 4.2E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_00085 779825d9ab1f162569b6c8690088580a 417 Pfam PF00155 Aminotransferase class I and II 66 401 4.2E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_01180 36b560454b9ccfad6175f0e4b58e05ab 289 SUPERFAMILY SSF53448 2 270 3.76E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01180 36b560454b9ccfad6175f0e4b58e05ab 289 Pfam PF00483 Nucleotidyl transferase 9 265 3.8E-31 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_01180 36b560454b9ccfad6175f0e4b58e05ab 289 Gene3D G3DSA:3.90.550.10 1 275 1.3E-80 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01850 108ae1fb4544253e8a9c4aafb396b98f 119 SUPERFAMILY SSF55620 3 117 4.06E-37 T 14-10-2018 VEJY3_01850 108ae1fb4544253e8a9c4aafb396b98f 119 Gene3D G3DSA:3.30.1130.10 1 118 2.8E-45 T 14-10-2018 VEJY3_01850 108ae1fb4544253e8a9c4aafb396b98f 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.7E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEJY3_01850 108ae1fb4544253e8a9c4aafb396b98f 119 SMART SM00905 6 116 2.6E-48 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEJY3_03370 45a7afbb84b518be3b80ae6c668c0e0e 365 SUPERFAMILY SSF52540 119 320 7.16E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03370 45a7afbb84b518be3b80ae6c668c0e0e 365 Pfam PF02562 PhoH-like protein 120 323 4.0E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VEJY3_03370 45a7afbb84b518be3b80ae6c668c0e0e 365 Gene3D G3DSA:3.40.50.300 117 323 4.3E-73 T 14-10-2018 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 SUPERFAMILY SSF52540 269 478 5.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 Gene3D G3DSA:3.40.50.300 1 239 3.7E-57 T 14-10-2018 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 Pfam PF00005 ABC transporter 270 423 2.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 SMART SM00382 30 249 4.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 SMART SM00382 278 472 1.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 Gene3D G3DSA:3.40.50.300 265 497 1.2E-46 T 14-10-2018 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 Pfam PF00005 ABC transporter 21 170 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 SUPERFAMILY SSF52540 5 228 2.27E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18951 c5d00bc49c7e0709f144d51a5cca50b7 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.4E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.4E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.4E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.4E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 8.6E-33 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 Gene3D G3DSA:1.20.120.1220 110 283 1.0E-5 T 14-10-2018 VEJY3_13040 70126122b4034c6325605d95ae59a72e 289 Pfam PF01478 Type IV leader peptidase family 135 244 6.2E-28 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VEJY3_22001 6979075a624ac5dd6aba466f98e5641e 322 SUPERFAMILY SSF56935 22 322 7.14E-50 T 14-10-2018 VEJY3_22001 6979075a624ac5dd6aba466f98e5641e 322 Gene3D G3DSA:2.40.160.10 22 322 2.3E-57 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_22001 6979075a624ac5dd6aba466f98e5641e 322 Pfam PF13609 Gram-negative porin 11 295 3.0E-26 T 14-10-2018 VEJY3_11330 127b119c7e89891488a2993bb6fd3eac 87 Pfam PF08891 YfcL protein 4 84 1.4E-32 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 SUPERFAMILY SSF103473 5 383 1.07E-54 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 Gene3D G3DSA:1.20.1720.10 10 384 7.0E-80 T 14-10-2018 VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.0E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.0E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 PRINTS PR01035 Tetracycline resistance protein signature 303 323 1.0E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_23806 f68da98edb058a340f23bc27f6eb7513 403 Pfam PF07690 Major Facilitator Superfamily 15 351 1.0E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Pfam PF13549 ATP-grasp domain 471 690 1.5E-65 T 14-10-2018 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 6.0E-42 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.40.630.30 713 877 1.8E-37 T 14-10-2018 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SMART SM00881 7 102 1.2E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.40.50.261 279 449 1.9E-49 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SUPERFAMILY SSF52210 118 276 8.24E-32 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.30.470.20 477 686 4.4E-54 T 14-10-2018 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SUPERFAMILY SSF56059 477 683 4.2E-26 T 14-10-2018 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.40.50.261 119 277 2.0E-42 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.30.1490.20 495 572 4.4E-54 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SUPERFAMILY SSF55729 718 862 8.33E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Pfam PF13380 CoA binding domain 12 122 4.5E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Gene3D G3DSA:3.40.50.720 1 118 1.5E-26 T 14-10-2018 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SUPERFAMILY SSF52210 281 441 1.44E-38 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 Pfam PF13302 Acetyltransferase (GNAT) domain 722 859 3.1E-7 T 14-10-2018 IPR000182 GNAT domain VEJY3_19856 aec95b35f2a7ce4701214a0aeaa32bda 877 SUPERFAMILY SSF51735 2 128 2.61E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19611 4c56e66de3f548b45d29faad95fa0044 386 Gene3D G3DSA:1.20.1250.20 12 194 1.2E-16 T 14-10-2018 VEJY3_19611 4c56e66de3f548b45d29faad95fa0044 386 SUPERFAMILY SSF103473 18 377 7.46E-33 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_19611 4c56e66de3f548b45d29faad95fa0044 386 Pfam PF07690 Major Facilitator Superfamily 18 193 6.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_19611 4c56e66de3f548b45d29faad95fa0044 386 Gene3D G3DSA:1.20.1250.20 201 383 1.1E-7 T 14-10-2018 VEJY3_03690 57c02a93d041048bfb8ed2e719a136a2 116 SMART SM00938 6 104 1.3E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_03690 57c02a93d041048bfb8ed2e719a136a2 116 Gene3D G3DSA:3.30.70.120 1 103 2.1E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEJY3_03690 57c02a93d041048bfb8ed2e719a136a2 116 SUPERFAMILY SSF54913 1 102 2.22E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_23191 7e3d5c2029171ca284fec4d4ed01ec39 150 SUPERFAMILY SSF49503 23 147 4.28E-45 T 14-10-2018 IPR008972 Cupredoxin VEJY3_23191 7e3d5c2029171ca284fec4d4ed01ec39 150 Gene3D G3DSA:2.60.40.420 23 149 4.5E-45 T 14-10-2018 IPR008972 Cupredoxin VEJY3_23191 7e3d5c2029171ca284fec4d4ed01ec39 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site VEJY3_23191 7e3d5c2029171ca284fec4d4ed01ec39 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 2.0E-66 T 14-10-2018 VEJY3_23191 7e3d5c2029171ca284fec4d4ed01ec39 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 2.7E-24 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 VEJY3_06660 1b60f53e92996aadac29e1834a0faef9 149 Gene3D G3DSA:3.10.450.40 2 133 8.6E-46 T 14-10-2018 VEJY3_06660 1b60f53e92996aadac29e1834a0faef9 149 SUPERFAMILY SSF160719 25 132 1.31E-27 T 14-10-2018 VEJY3_06660 1b60f53e92996aadac29e1834a0faef9 149 Pfam PF04965 Gene 25-like lysozyme 29 118 1.0E-20 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 Gene3D G3DSA:1.10.10.10 1 86 9.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 Gene3D G3DSA:3.40.190.290 90 278 1.5E-24 T 14-10-2018 VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 SUPERFAMILY SSF53850 89 281 1.21E-23 T 14-10-2018 VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 Pfam PF03466 LysR substrate binding domain 89 276 1.2E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18246 d6b5e0e9525eaec71f473153dc978deb 293 SUPERFAMILY SSF46785 1 111 4.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04610 2951c1414f20b793519f4d0380ba45bb 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 1.1E-262 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VEJY3_08080 2bf6d740666b74be953e381df15622f5 432 SUPERFAMILY SSF56349 96 407 1.53E-39 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_08080 2bf6d740666b74be953e381df15622f5 432 Gene3D G3DSA:1.10.150.130 90 218 6.7E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_08080 2bf6d740666b74be953e381df15622f5 432 Gene3D G3DSA:1.10.443.10 219 420 1.9E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_08080 2bf6d740666b74be953e381df15622f5 432 Pfam PF00589 Phage integrase family 227 406 2.2E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_02580 8cdee103f87ee4e1c1a83f5eda193e42 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_02580 8cdee103f87ee4e1c1a83f5eda193e42 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 2.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_02580 8cdee103f87ee4e1c1a83f5eda193e42 84 Gene3D G3DSA:3.30.70.20 2 83 1.0E-34 T 14-10-2018 VEJY3_02580 8cdee103f87ee4e1c1a83f5eda193e42 84 SUPERFAMILY SSF54862 4 72 2.12E-17 T 14-10-2018 VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 SMART SM00945 3 117 8.3E-66 T 14-10-2018 IPR016103 ProQ/FinO domain VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 SUPERFAMILY SSF48657 4 117 9.42E-41 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.41 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.1E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 Gene3D G3DSA:1.10.1710.10 1 117 7.3E-26 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VEJY3_07625 251fff42579353df1f2d5c5834763e02 208 Pfam PF04352 ProQ/FINO family 6 113 1.1E-43 T 14-10-2018 IPR016103 ProQ/FinO domain VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 PIRSF PIRSF000445 1 418 3.8E-156 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.7E-50 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 SUPERFAMILY SSF69075 315 416 6.8E-29 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.6E-48 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 SUPERFAMILY SSF51735 160 313 3.25E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.731 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 SUPERFAMILY SSF69742 1 156 1.01E-46 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Gene3D G3DSA:3.40.50.720 159 311 1.1E-45 T 14-10-2018 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Gene3D G3DSA:3.30.460.30 1 156 1.7E-54 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_03410 ea28da05ffb0920f206e5a811362123f 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 3.7E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 6.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 Gene3D G3DSA:1.10.287.130 205 319 1.1E-19 T 14-10-2018 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 SUPERFAMILY SSF55874 309 468 7.99E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 SUPERFAMILY SSF47384 237 318 1.75E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 4.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 4.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 4.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 SMART SM00388 254 319 3.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 Pfam PF08521 Two-component sensor kinase N-terminal 23 177 3.0E-8 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 SMART SM00387 362 470 2.8E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 8.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08040 c7847b8e4b28cbafb6ad49188b06214a 470 Gene3D G3DSA:3.30.565.10 323 469 3.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_20596 6648b2fe309ac5df8feef8715899a3f8 381 SUPERFAMILY SSF52096 18 344 1.78E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20596 6648b2fe309ac5df8feef8715899a3f8 381 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 8.3E-104 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VEJY3_20596 6648b2fe309ac5df8feef8715899a3f8 381 Gene3D G3DSA:3.90.226.10 5 375 1.7E-112 T 14-10-2018 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.8E-84 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 Gene3D G3DSA:3.40.640.10 60 300 1.6E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 SUPERFAMILY SSF53383 1 395 3.16E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 Gene3D G3DSA:3.90.1150.10 5 392 1.6E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_10015 f585f9dd226a5494c4db33febbf225d3 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 Pfam PF00733 Asparagine synthase 211 366 6.1E-56 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.6E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 PIRSF PIRSF001589 362 506 3.4E-27 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 PIRSF PIRSF001589 1 372 3.8E-105 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 Gene3D G3DSA:3.60.20.10 2 193 1.1E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 Gene3D G3DSA:3.40.50.620 194 514 1.2E-111 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 SUPERFAMILY SSF56235 1 196 1.37E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_03755 27a525bd1aa168338d242805e0f58dbc 554 SUPERFAMILY SSF52402 208 479 6.7E-74 T 14-10-2018 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 1.3E-66 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 Gene3D G3DSA:1.10.441.10 151 308 6.0E-133 T 14-10-2018 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 SUPERFAMILY SSF51182 3 381 2.67E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 Gene3D G3DSA:2.60.120.10 309 390 6.0E-133 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 Gene3D G3DSA:2.60.120.10 10 283 6.0E-133 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 PIRSF PIRSF001480 2 397 1.3E-102 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_09125 48148fb6fb4d2b661a9170d2400941ab 397 Pfam PF01238 Phosphomannose isomerase type I 6 363 5.4E-88 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_15245 1044f7687f4faa8d37b8e420e930f981 441 Gene3D G3DSA:3.20.20.70 218 428 3.1E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_15245 1044f7687f4faa8d37b8e420e930f981 441 Pfam PF02581 Thiamine monophosphate synthase 232 409 9.4E-51 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_15245 1044f7687f4faa8d37b8e420e930f981 441 SUPERFAMILY SSF51391 224 426 3.66E-58 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_08870 6d3251c34da97ced0d2afdc76e5bc53b 126 SUPERFAMILY SSF54427 1 123 1.56E-32 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_08870 6d3251c34da97ced0d2afdc76e5bc53b 126 Gene3D G3DSA:3.10.450.50 1 126 2.6E-33 T 14-10-2018 VEJY3_08870 6d3251c34da97ced0d2afdc76e5bc53b 126 Pfam PF12680 SnoaL-like domain 7 101 7.7E-11 T 14-10-2018 IPR037401 SnoaL-like domain VEJY3_17641 466f556ce8a5f402dfd2714b2a5d31de 102 Pfam PF03927 NapD protein 6 80 8.0E-30 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VEJY3_17641 466f556ce8a5f402dfd2714b2a5d31de 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.61 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VEJY3_17641 466f556ce8a5f402dfd2714b2a5d31de 102 Gene3D G3DSA:3.30.70.920 6 75 1.9E-22 T 14-10-2018 VEJY3_04920 e6306763260c8f7821445abfca5c1fc1 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 9.9E-92 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VEJY3_04920 e6306763260c8f7821445abfca5c1fc1 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 207 2.2E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_04920 e6306763260c8f7821445abfca5c1fc1 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.637 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 Pfam PF07244 Surface antigen variable number repeat 355 425 2.1E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 SUPERFAMILY SSF52151 39 324 9.68E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 Gene3D G3DSA:3.40.1090.10 147 291 2.1E-17 T 14-10-2018 VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 Gene3D G3DSA:3.40.1090.10 28 142 1.1E-28 T 14-10-2018 VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 Pfam PF01734 Patatin-like phospholipase 45 235 1.5E-26 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEJY3_12915 a7f62f5ca0b7e441b77d19cf35b23cf1 772 Gene3D G3DSA:3.10.20.310 350 425 2.0E-6 T 14-10-2018 VEJY3_04580 68f2371a0f477953f115282ff784bf84 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 8.8E-72 T 14-10-2018 IPR010650 PrkA C-terminal domain VEJY3_04580 68f2371a0f477953f115282ff784bf84 644 Pfam PF08298 PrkA AAA domain 19 380 6.9E-177 T 14-10-2018 IPR013153 PrkA AAA domain VEJY3_04580 68f2371a0f477953f115282ff784bf84 644 SUPERFAMILY SSF52540 72 368 3.7E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04580 68f2371a0f477953f115282ff784bf84 644 SMART SM00763 19 380 1.8E-219 T 14-10-2018 IPR013153 PrkA AAA domain VEJY3_04580 68f2371a0f477953f115282ff784bf84 644 PIRSF PIRSF000549 1 644 9.9E-290 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VEJY3_01470 f7453fe1b3c797f19dfff9b0a388e40a 205 Gene3D G3DSA:3.40.50.300 9 205 8.6E-79 T 14-10-2018 VEJY3_01470 f7453fe1b3c797f19dfff9b0a388e40a 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.755 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VEJY3_01470 f7453fe1b3c797f19dfff9b0a388e40a 205 SUPERFAMILY SSF52540 25 201 3.42E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01470 f7453fe1b3c797f19dfff9b0a388e40a 205 Pfam PF01583 Adenylylsulphate kinase 31 185 2.3E-70 T 14-10-2018 VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 3 114 4.8E-9 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 174 205 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 Gene3D G3DSA:3.20.20.120 109 328 6.5E-53 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 SUPERFAMILY SSF51604 120 323 8.91E-50 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 Gene3D G3DSA:3.30.390.10 1 105 2.8E-20 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 SMART SM00922 133 224 2.7E-13 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 SUPERFAMILY SSF54826 2 114 5.89E-20 T 14-10-2018 VEJY3_18491 e6eb227bdce5474782cca37f2c4f834e 328 Pfam PF13378 Enolase C-terminal domain-like 145 292 2.5E-26 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SUPERFAMILY SSF47384 529 603 9.02E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00388 533 606 3.5E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00387 650 761 7.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Gene3D G3DSA:3.30.565.10 607 769 8.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Gene3D G3DSA:1.10.287.130 538 603 4.3E-18 T 14-10-2018 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 396 1.2E-18 T 14-10-2018 IPR000014 PAS domain VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 650 760 5.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 758 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 720 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 739 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00086 347 390 1.9E-7 T 14-10-2018 IPR001610 PAC motif VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Pfam PF08447 PAS fold 300 383 8.3E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Gene3D G3DSA:3.30.450.20 406 525 4.0E-6 T 14-10-2018 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Pfam PF00512 His Kinase A (phospho-acceptor) domain 534 602 2.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SUPERFAMILY SSF55785 280 393 9.99E-26 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00091 398 464 0.26 T 14-10-2018 IPR000014 PAS domain VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00091 275 342 2.7E-7 T 14-10-2018 IPR000014 PAS domain VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SMART SM00091 165 236 220.0 T 14-10-2018 IPR000014 PAS domain VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SUPERFAMILY SSF55785 387 509 2.09E-7 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 Gene3D G3DSA:3.30.450.20 274 405 3.6E-27 T 14-10-2018 VEJY3_16971 a2ef93cd19500095b9efb3836648117b 777 SUPERFAMILY SSF55874 604 759 7.2E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10105 8a2756173593e9d5e5bf080c065393b6 345 Gene3D G3DSA:1.20.1420.20 26 345 6.9E-74 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VEJY3_10105 8a2756173593e9d5e5bf080c065393b6 345 Pfam PF09375 Imelysin 46 324 4.5E-42 T 14-10-2018 IPR018976 Imelysin-like domain VEJY3_03340 6c2ef4da84a66c73949a5677eea9e9d8 180 Pfam PF04390 Lipopolysaccharide-assembly 46 159 3.6E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VEJY3_03340 6c2ef4da84a66c73949a5677eea9e9d8 180 Gene3D G3DSA:3.30.160.150 19 168 2.5E-49 T 14-10-2018 VEJY3_03340 6c2ef4da84a66c73949a5677eea9e9d8 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.019 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 Pfam PF00072 Response regulator receiver domain 5 116 7.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 SMART SM00448 2 115 1.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 SUPERFAMILY SSF52172 1 131 6.83E-32 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 SMART SM00421 145 202 8.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 Gene3D G3DSA:3.40.50.12740 2 208 2.7E-61 T 14-10-2018 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 SUPERFAMILY SSF46894 140 208 2.11E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19276 ba2a5555963c9d7a192159b295236686 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 Gene3D G3DSA:2.40.30.160 190 310 6.3E-34 T 14-10-2018 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 Gene3D G3DSA:3.30.70.1630 26 187 3.2E-40 T 14-10-2018 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 SUPERFAMILY SSF103025 16 236 7.69E-56 T 14-10-2018 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 SUPERFAMILY SSF101790 237 320 4.45E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 144 6.2E-6 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.485 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 PIRSF PIRSF006487 21 157 7.9E-6 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 PIRSF PIRSF006487 162 318 0.32 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEJY3_13310 b38716fddaa4c09b4e53e0fbc16d08d6 322 Gene3D G3DSA:3.30.70.1400 29 115 3.2E-40 T 14-10-2018 VEJY3_21876 11283a24d6190d38cb0a104fe2c8b046 409 Pfam PF02687 FtsX-like permease family 292 396 4.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_21876 11283a24d6190d38cb0a104fe2c8b046 409 Pfam PF12704 MacB-like periplasmic core domain 17 207 3.8E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 Gene3D G3DSA:1.10.1660.10 1 126 3.0E-34 T 14-10-2018 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 Pfam PF09278 MerR, DNA binding 45 109 1.1E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 SMART SM00422 3 71 8.1E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 SUPERFAMILY SSF46955 4 124 1.9E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_16811 6b04deb0827e79b5095e10e358b6a3f9 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Gene3D G3DSA:3.90.55.10 82 615 4.1E-240 T 14-10-2018 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 2.7E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 SUPERFAMILY SSF50692 669 817 1.29E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Gene3D G3DSA:3.40.50.740 87 569 4.1E-240 T 14-10-2018 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 6.9E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Gene3D G3DSA:3.40.228.10 179 641 4.1E-240 T 14-10-2018 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 SUPERFAMILY SSF53706 42 660 4.19E-167 T 14-10-2018 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_05665 1854b706c6d90d2168a0b3544320d1ec 820 Gene3D G3DSA:2.40.40.20 649 813 7.7E-49 T 14-10-2018 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 PIRSF PIRSF015689 1 311 5.6E-135 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 Gene3D G3DSA:3.30.360.10 131 298 7.0E-134 T 14-10-2018 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 311 140.893 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 308 3.4E-143 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 SUPERFAMILY SSF51735 1 155 5.37E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 SUPERFAMILY SSF55347 131 284 2.81E-65 T 14-10-2018 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 Gene3D G3DSA:3.40.50.720 4 305 7.0E-134 T 14-10-2018 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 1.5E-63 T 14-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 SMART SM00859 5 123 1.1E-13 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_06800 eb616219dceb50cac074a49acd8e1f7d 311 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 2.9E-12 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_23431 7b2cbcdcdf87ce73d7aa1549e43c0bbe 325 SMART SM00587 109 266 0.0042 T 14-10-2018 IPR015897 CHK kinase-like VEJY3_23431 7b2cbcdcdf87ce73d7aa1549e43c0bbe 325 Gene3D G3DSA:3.90.1200.10 118 294 9.5E-8 T 14-10-2018 VEJY3_23431 7b2cbcdcdf87ce73d7aa1549e43c0bbe 325 Pfam PF02958 Ecdysteroid kinase 167 266 7.5E-10 T 14-10-2018 IPR004119 Protein of unknown function DUF227 VEJY3_23431 7b2cbcdcdf87ce73d7aa1549e43c0bbe 325 Pfam PF02958 Ecdysteroid kinase 65 143 4.8E-6 T 14-10-2018 IPR004119 Protein of unknown function DUF227 VEJY3_23431 7b2cbcdcdf87ce73d7aa1549e43c0bbe 325 SUPERFAMILY SSF56112 29 272 9.61E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.497 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 PIRSF PIRSF001549 2 422 1.1E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 Gene3D G3DSA:3.30.930.10 2 323 1.4E-118 T 14-10-2018 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 Gene3D G3DSA:3.40.50.800 326 421 1.3E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.6E-44 T 14-10-2018 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 SUPERFAMILY SSF52954 327 421 1.26E-26 T 14-10-2018 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 SUPERFAMILY SSF55681 5 320 3.78E-104 T 14-10-2018 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 2.5E-158 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VEJY3_02785 ad7dfd07c871f41a12f2f661a6d46faf 422 Pfam PF03129 Anticodon binding domain 329 420 2.4E-10 T 14-10-2018 IPR004154 Anticodon-binding VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 639 49.056 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 Pfam PF04055 Radical SAM superfamily 372 577 7.0E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 Pfam PF11842 Domain of unknown function (DUF3362) 586 744 1.3E-40 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 372 392 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 SUPERFAMILY SSF102114 371 606 4.32E-11 T 14-10-2018 VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 SMART SM00729 368 618 1.6E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 Pfam PF08497 Radical SAM N-terminal 24 371 7.6E-143 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VEJY3_10360 f2cf3bac06af72ec042a2b3b5c1433f9 778 Gene3D G3DSA:3.80.30.20 367 631 2.1E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Gene3D G3DSA:1.20.140.10 233 382 2.4E-55 T 14-10-2018 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.4E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 PIRSF PIRSF016578 3 382 7.7E-24 T 14-10-2018 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.0E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Gene3D G3DSA:2.40.110.10 120 232 9.1E-43 T 14-10-2018 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 SUPERFAMILY SSF56645 1 240 2.49E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 SUPERFAMILY SSF47203 225 378 7.89E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 3.7E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 Gene3D G3DSA:1.10.540.10 1 117 7.3E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEJY3_20606 a34b962f964de7b685048fd16702c024 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 SUPERFAMILY SSF51735 4 194 1.57E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PIRSF PIRSF000110 3 489 2.7E-176 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 SUPERFAMILY SSF55347 181 489 3.11E-112 T 14-10-2018 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 84.116 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 Gene3D G3DSA:3.30.360.10 180 488 3.6E-123 T 14-10-2018 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 1.4E-113 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 Gene3D G3DSA:3.40.50.720 4 179 1.2E-58 T 14-10-2018 VEJY3_07925 514ae06e027665e27c01a2230e67398b 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 1.4E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEJY3_05385 607dafd743d9b01d497ca83edb59f892 256 Gene3D G3DSA:1.20.1260.10 7 76 1.4E-16 T 14-10-2018 IPR012347 Ferritin-like VEJY3_05385 607dafd743d9b01d497ca83edb59f892 256 Gene3D G3DSA:1.20.1260.10 97 256 1.9E-55 T 14-10-2018 IPR012347 Ferritin-like VEJY3_05385 607dafd743d9b01d497ca83edb59f892 256 PIRSF PIRSF020736 2 256 2.6E-92 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VEJY3_05385 607dafd743d9b01d497ca83edb59f892 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 1.4E-119 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VEJY3_05385 607dafd743d9b01d497ca83edb59f892 256 SUPERFAMILY SSF47240 11 255 1.12E-74 T 14-10-2018 IPR009078 Ferritin-like superfamily VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Gene3D G3DSA:3.30.980.10 562 696 1.2E-50 T 14-10-2018 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 SUPERFAMILY SSF55681 3 254 7.46E-108 T 14-10-2018 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 8.5E-226 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Gene3D G3DSA:3.10.310.40 749 857 1.6E-33 T 14-10-2018 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Gene3D G3DSA:3.30.930.10 2 251 4.5E-120 T 14-10-2018 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Pfam PF02272 DHHA1 domain 722 854 1.3E-27 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 SUPERFAMILY SSF101353 255 461 8.5E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 SMART SM00863 652 695 3.9E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 SUPERFAMILY SSF55186 551 709 2.75E-53 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Gene3D G3DSA:2.40.30.130 460 551 9.3E-10 T 14-10-2018 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.542 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 SUPERFAMILY SSF50447 454 551 1.59E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_13150 378304b8bf2c2279bb63f3f01179ad28 860 Gene3D G3DSA:3.30.54.20 623 676 1.2E-50 T 14-10-2018 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 SUPERFAMILY SSF50249 16 101 3.86E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 Gene3D G3DSA:3.30.930.10 109 465 8.3E-109 T 14-10-2018 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.861 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 SUPERFAMILY SSF55681 97 464 4.58E-95 T 14-10-2018 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.0E-206 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 5.6E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.4E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_09995 f1b284e032a5e3b266adf4e1b4635ee9 466 Gene3D G3DSA:2.40.50.140 3 106 5.8E-20 T 14-10-2018 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 Gene3D G3DSA:3.30.1330.60 80 222 3.9E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 PRINTS PR01021 OMPA domain signature 163 179 7.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 PRINTS PR01021 OMPA domain signature 148 163 7.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 Pfam PF00691 OmpA family 118 212 1.2E-20 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 Pfam PF13488 Glycine zipper 38 86 4.3E-11 T 14-10-2018 IPR039567 Glycine zipper domain VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 1.0E-5 T 14-10-2018 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 1.0E-5 T 14-10-2018 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 1.0E-5 T 14-10-2018 VEJY3_06110 1a3a21a00616cd23d0643920e52b9e26 222 SUPERFAMILY SSF103088 106 221 5.1E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_04640 d80bed45da991c4323ce6a8bfdedc9c9 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VEJY3_04640 d80bed45da991c4323ce6a8bfdedc9c9 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VEJY3_04640 d80bed45da991c4323ce6a8bfdedc9c9 268 SUPERFAMILY SSF56219 1 268 1.2E-85 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_04640 d80bed45da991c4323ce6a8bfdedc9c9 268 Gene3D G3DSA:3.60.10.10 1 268 1.6E-77 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_04640 d80bed45da991c4323ce6a8bfdedc9c9 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.4E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Gene3D G3DSA:3.40.190.10 374 469 4.9E-53 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 SUPERFAMILY SSF53850 291 507 6.39E-33 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Gene3D G3DSA:3.30.450.20 35 237 5.0E-11 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 SMART SM00471 688 999 2.3E-4 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Pfam PF02743 Cache domain 45 261 8.2E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 SUPERFAMILY SSF109604 683 792 4.71E-9 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Pfam PF13487 HD domain 916 981 2.7E-19 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Gene3D G3DSA:3.40.190.10 280 506 4.9E-53 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Gene3D G3DSA:1.10.3210.10 667 778 1.7E-19 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Gene3D G3DSA:1.10.3210.10 910 1040 1.1E-23 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 SUPERFAMILY SSF109604 917 1027 1.66E-6 T 14-10-2018 VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 291 508 4.5E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_18381 e0c4ab4785d224d0af7085f32f086ade 1069 SMART SM00062 290 509 5.5E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 130 1.2E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 Pfam PF00209 Sodium:neurotransmitter symporter family 156 452 1.8E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_12170 6a0b71b9bd0c11c4f120bb7e076cbd66 454 SUPERFAMILY SSF161070 10 453 3.01E-117 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 SUPERFAMILY SSF53697 108 270 1.07E-25 T 14-10-2018 VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 Gene3D G3DSA:3.40.50.10490 109 280 2.6E-33 T 14-10-2018 VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 Gene3D G3DSA:1.10.10.10 5 82 3.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 75 6.0E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 SUPERFAMILY SSF46689 9 85 2.87E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08640 1f36b68f0af5d10f26b10125277f202e 280 Pfam PF01380 SIS domain 141 267 4.3E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_00905 30b2f9f66a2432ec34a67a8916dd7e30 334 Gene3D G3DSA:3.40.50.2000 152 325 1.6E-14 T 14-10-2018 VEJY3_00905 30b2f9f66a2432ec34a67a8916dd7e30 334 SUPERFAMILY SSF53756 11 318 6.59E-27 T 14-10-2018 VEJY3_00905 30b2f9f66a2432ec34a67a8916dd7e30 334 Gene3D G3DSA:3.40.50.2000 6 148 3.6E-9 T 14-10-2018 VEJY3_00905 30b2f9f66a2432ec34a67a8916dd7e30 334 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 68 273 6.7E-8 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 364 442 5.1E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 Pfam PF00460 Flagella basal body rod protein 3 32 7.4E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 SUPERFAMILY SSF117143 78 404 2.62E-67 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 Gene3D G3DSA:2.60.98.20 154 324 3.9E-22 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VEJY3_03560 a5e710f74636470cc5e133b151bcaa49 443 Pfam PF07559 Flagellar basal body protein FlaE 181 323 2.0E-22 T 14-10-2018 IPR011491 Flagellar hook protein FlgE VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 PIRSF PIRSF000183 1 371 8.0E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 Gene3D G3DSA:3.40.50.720 130 305 2.7E-136 T 14-10-2018 VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 SMART SM01002 149 297 8.6E-87 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.8E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 Gene3D G3DSA:3.40.50.720 3 353 2.7E-136 T 14-10-2018 VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 SUPERFAMILY SSF52283 1 360 7.14E-67 T 14-10-2018 VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 SUPERFAMILY SSF51735 137 303 6.19E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.3E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEJY3_05405 57660cb8ea7931ff020f37bfddc2fdcf 374 SMART SM01003 4 137 3.8E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEJY3_24286 487e552968807e7f39a8e0679d56fb23 235 Gene3D G3DSA:3.40.605.10 28 219 8.5E-9 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_24286 487e552968807e7f39a8e0679d56fb23 235 SUPERFAMILY SSF53720 9 180 7.71E-11 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Pfam PF17391 Urocanase N-terminal domain 88 214 3.5E-57 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Gene3D G3DSA:3.40.50.10730 223 432 5.1E-80 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 PIRSF PIRSF001423 69 663 5.9E-190 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Gene3D G3DSA:3.40.1770.10 79 222 5.7E-58 T 14-10-2018 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Pfam PF01175 Urocanase Rossmann-like domain 217 434 4.0E-85 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 SUPERFAMILY SSF111326 88 652 9.81E-228 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Hamap MF_00577 Urocanate hydratase [hutU]. 59 658 45.25 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 ProSitePatterns PS01233 Urocanase signature. 539 554 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Pfam PF17392 Urocanase C-terminal domain 439 643 8.6E-88 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_17196 3d324a7712601f0c2028b63ba4af7018 670 Gene3D G3DSA:3.40.1770.10 433 653 1.3E-92 T 14-10-2018 VEJY3_10565 2a52c2236b678f914e1e81a046158e20 226 SUPERFAMILY SSF52540 6 223 3.64E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10565 2a52c2236b678f914e1e81a046158e20 226 Gene3D G3DSA:3.40.50.300 1 225 2.0E-82 T 14-10-2018 VEJY3_10565 2a52c2236b678f914e1e81a046158e20 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.362 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEJY3_10565 2a52c2236b678f914e1e81a046158e20 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.7E-85 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEJY3_10565 2a52c2236b678f914e1e81a046158e20 226 Pfam PF02224 Cytidylate kinase 8 221 1.6E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 8.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 8.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 8.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 8.6E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 SUPERFAMILY SSF46626 60 133 3.2E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 7.2E-15 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_00195 eb89532d715ec5e8f94ad72f144e9838 137 Gene3D G3DSA:1.10.760.10 59 136 6.9E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_12580 a11a1b859195629cabb0cec1adc5f01b 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 2.6E-39 T 14-10-2018 IPR019305 Uncharacterised protein family Smp VEJY3_12825 b26ff6dc0d12c58dabcc9cf7674868e1 341 Gene3D G3DSA:1.10.3720.10 94 303 4.1E-15 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12825 b26ff6dc0d12c58dabcc9cf7674868e1 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 301 2.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_12825 b26ff6dc0d12c58dabcc9cf7674868e1 341 SUPERFAMILY SSF161098 96 288 1.44E-19 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_08480 bcac4068fbb350e910ac1b13c82c1e68 231 SUPERFAMILY SSF52507 41 139 4.19E-5 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 SUPERFAMILY SSF63418 15 106 2.49E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Gene3D G3DSA:3.90.190.20 340 491 1.2E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.953 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 SUPERFAMILY SSF53623 109 336 1.3E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Pfam PF08245 Mur ligase middle domain 115 316 5.0E-50 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 1.2E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Gene3D G3DSA:3.40.1390.10 4 106 2.6E-26 T 14-10-2018 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Gene3D G3DSA:3.40.1190.10 108 339 1.7E-78 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 Pfam PF01225 Mur ligase family, catalytic domain 26 98 1.0E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEJY3_02055 23a07a4854166a869af11ec2ed3132d7 493 SUPERFAMILY SSF53244 338 489 5.65E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 SUPERFAMILY SSF51735 2 188 4.87E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 346 65.745 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 325 2.0E-55 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 SUPERFAMILY SSF55347 164 326 8.93E-59 T 14-10-2018 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 2.4E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 121 134 2.4E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 2.4E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 2.4E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 2.4E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 SMART SM00846 2 164 7.8E-68 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 Gene3D G3DSA:3.30.360.10 163 327 4.0E-126 T 14-10-2018 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 Gene3D G3DSA:3.40.50.720 3 337 4.0E-126 T 14-10-2018 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 PIRSF PIRSF000149 1 346 1.8E-124 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13390 015eb19227a124559bbb6d386cfaa715 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 1.3E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_24351 2c233733035a0fb5b20d45b603b65b5f 196 Gene3D G3DSA:2.30.30.60 124 176 1.9E-7 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_24351 2c233733035a0fb5b20d45b603b65b5f 196 SUPERFAMILY SSF50182 109 175 6.54E-12 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_24351 2c233733035a0fb5b20d45b603b65b5f 196 Pfam PF00924 Mechanosensitive ion channel 79 174 1.8E-11 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_18421 2263422243745d0f79b74dd349bd0be2 414 Gene3D G3DSA:3.40.50.2300 152 383 1.6E-92 T 14-10-2018 VEJY3_18421 2263422243745d0f79b74dd349bd0be2 414 SUPERFAMILY SSF53822 25 391 1.14E-54 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_18421 2263422243745d0f79b74dd349bd0be2 414 Pfam PF13458 Periplasmic binding protein 27 389 8.5E-67 T 14-10-2018 IPR028081 Leucine-binding protein domain VEJY3_18421 2263422243745d0f79b74dd349bd0be2 414 Gene3D G3DSA:3.40.50.2300 29 381 1.6E-92 T 14-10-2018 VEJY3_19701 5060df42f666529bdd200d38c999f811 156 SUPERFAMILY SSF102114 24 124 2.88E-8 T 14-10-2018 VEJY3_19701 5060df42f666529bdd200d38c999f811 156 Gene3D G3DSA:3.20.20.70 2 155 4.9E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_19701 5060df42f666529bdd200d38c999f811 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.4E-53 T 14-10-2018 VEJY3_19701 5060df42f666529bdd200d38c999f811 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEJY3_19701 5060df42f666529bdd200d38c999f811 156 PIRSF PIRSF000368 1 156 6.8E-61 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 SUPERFAMILY SSF49863 651 751 3.73E-18 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 86 327 2.1E-30 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Gene3D G3DSA:2.70.98.10 371 643 1.9E-75 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 SUPERFAMILY SSF74650 371 657 3.56E-69 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 374 638 1.6E-69 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Gene3D G3DSA:2.60.220.10 644 751 7.0E-21 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 SUPERFAMILY SSF48230 85 381 4.71E-62 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Gene3D G3DSA:1.50.10.100 64 345 7.0E-65 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VEJY3_11250 e44661c2badbed39d14c16f0d782be16 954 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 652 714 6.7E-14 T 14-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 VEJY3_20776 72b91864d4d979e91ed7d8e348100768 277 Gene3D G3DSA:3.40.50.150 52 266 5.5E-31 T 14-10-2018 VEJY3_20776 72b91864d4d979e91ed7d8e348100768 277 Pfam PF13649 Methyltransferase domain 70 164 4.4E-16 T 14-10-2018 VEJY3_20776 72b91864d4d979e91ed7d8e348100768 277 SUPERFAMILY SSF53335 49 261 8.29E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_20776 72b91864d4d979e91ed7d8e348100768 277 Gene3D G3DSA:2.20.25.110 172 236 5.5E-31 T 14-10-2018 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 PIRSF PIRSF036408 15 454 7.8E-170 T 14-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Pfam PF10531 SLBB domain 178 223 1.9E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 SUPERFAMILY SSF142984 175 243 9.15E-15 T 14-10-2018 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Gene3D G3DSA:1.10.1060.10 254 341 2.4E-5 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Gene3D G3DSA:3.40.50.11540 29 170 3.0E-14 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 SUPERFAMILY SSF142019 10 181 3.53E-46 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 SUPERFAMILY SSF46548 219 344 6.8E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Gene3D G3DSA:3.10.20.600 171 238 3.5E-7 T 14-10-2018 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 24 163 6.6E-40 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Pfam PF13375 RnfC Barrel sandwich hybrid domain 391 450 2.9E-14 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VEJY3_08460 18f10d0bb6062a56d7445775107d7a60 455 Pfam PF13534 4Fe-4S dicluster domain 267 327 1.2E-7 T 14-10-2018 VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 Gene3D G3DSA:3.40.190.10 26 240 2.8E-75 T 14-10-2018 VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 SMART SM00062 22 243 7.3E-72 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 Gene3D G3DSA:3.40.190.10 109 201 2.8E-75 T 14-10-2018 VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 SUPERFAMILY SSF53850 1 242 1.5E-67 T 14-10-2018 VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_20496 90dcfaeb6a4f8dc4a0af1e1592d3d3c3 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 8.5E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 Gene3D G3DSA:3.30.465.40 17 213 2.0E-48 T 14-10-2018 VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 4.9E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 3.8E-62 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 SUPERFAMILY SSF55103 253 538 8.83E-52 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 Pfam PF01565 FAD binding domain 52 191 5.6E-37 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 SUPERFAMILY SSF56176 32 277 1.56E-51 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_06125 75fbc340e2d5c22b128113f3b3dbd6e9 1011 SUPERFAMILY SSF46548 571 685 6.45E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_11690 c923ce106804b970d135ea5d26c1607b 339 Gene3D G3DSA:3.30.530.50 97 207 6.6E-13 T 14-10-2018 VEJY3_11690 c923ce106804b970d135ea5d26c1607b 339 Gene3D G3DSA:3.30.310.170 221 339 6.1E-42 T 14-10-2018 VEJY3_11690 c923ce106804b970d135ea5d26c1607b 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 3.7E-103 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein VEJY3_11690 c923ce106804b970d135ea5d26c1607b 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.612 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VEJY3_11690 c923ce106804b970d135ea5d26c1607b 339 PIRSF PIRSF026343 4 339 1.5E-117 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 Pfam PF01709 Transcriptional regulator 5 236 5.9E-71 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.039 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 Gene3D G3DSA:1.10.10.200 17 78 1.7E-17 T 14-10-2018 IPR017856 Integrase-like, N-terminal VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 Gene3D G3DSA:3.30.70.980 83 235 2.9E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 SUPERFAMILY SSF75625 1 237 1.26E-74 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_15806 2e5ac5e9ad11fefc15c2e1350c61d935 238 Gene3D G3DSA:3.30.70.980 131 202 2.9E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 Gene3D G3DSA:3.30.450.20 35 212 3.3E-47 T 14-10-2018 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 Pfam PF17200 Single Cache domain 2 53 198 1.4E-42 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 457 1.8E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 Gene3D G3DSA:3.30.565.10 319 459 1.0E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.7E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.7E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.7E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 SMART SM00387 359 460 5.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 SUPERFAMILY SSF55874 322 456 2.88E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 Pfam PF07730 Histidine kinase 256 321 5.5E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEJY3_19271 25630a5366016bdabf8fd4438aa21aa7 461 SMART SM01049 48 139 1.9E-25 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Gene3D G3DSA:4.10.1250.10 233 281 1.3E-20 T 14-10-2018 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Gene3D G3DSA:3.30.70.1400 56 139 1.8E-84 T 14-10-2018 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 SUPERFAMILY SSF103025 4 281 7.22E-90 T 14-10-2018 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 SUPERFAMILY SSF101790 279 371 3.11E-26 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 1.6E-22 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Gene3D G3DSA:3.30.1360.120 7 231 1.8E-84 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Gene3D G3DSA:2.40.30.110 284 361 1.2E-28 T 14-10-2018 VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 1.1E-86 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VEJY3_20196 f7fd8d5d3e350be57819ba477f2519f3 372 PIRSF PIRSF006487 1 372 2.9E-79 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 SMART SM01086 319 414 4.5E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Gene3D G3DSA:1.10.8.60 318 426 3.7E-41 T 14-10-2018 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.0E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 SUPERFAMILY SSF52540 63 404 5.06E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 14-10-2018 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VEJY3_04210 f2947058c3f7979f322e6fa2ee71395b 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.311 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VEJY3_01000 0adc04369455bc8d1e3a4b17e6fa1c2c 295 SUPERFAMILY SSF53448 1 287 7.89E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01000 0adc04369455bc8d1e3a4b17e6fa1c2c 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-157 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VEJY3_01000 0adc04369455bc8d1e3a4b17e6fa1c2c 295 Pfam PF00483 Nucleotidyl transferase 2 238 8.0E-72 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_01000 0adc04369455bc8d1e3a4b17e6fa1c2c 295 Gene3D G3DSA:3.90.550.10 1 293 1.3E-86 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 SMART SM00382 347 491 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 SUPERFAMILY SSF54211 594 769 2.39E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Gene3D G3DSA:3.30.230.10 584 771 1.3E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.172 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Gene3D G3DSA:1.20.58.1480 119 244 6.2E-44 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 7.1E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Gene3D G3DSA:2.30.130.40 1 116 2.0E-35 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Gene3D G3DSA:1.10.8.60 490 583 2.7E-34 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 SUPERFAMILY SSF88697 10 200 1.74E-48 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Gene3D G3DSA:3.40.50.300 312 489 6.9E-61 T 14-10-2018 VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 SUPERFAMILY SSF52540 312 586 2.7E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 SMART SM00464 10 201 1.4E-76 T 14-10-2018 IPR003111 Lon, substrate-binding domain VEJY3_04215 8cb7914af440ad29cba4e12c0fd5f266 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 4.8E-100 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEJY3_09765 b642f5d05da8ba1f9d894b3c8ce013f7 665 Pfam PF05876 Phage terminase large subunit (GpA) 39 609 6.4E-154 T 14-10-2018 IPR008866 Bacteriophage lambda, GpA VEJY3_09765 b642f5d05da8ba1f9d894b3c8ce013f7 665 Gene3D G3DSA:3.40.50.300 28 223 3.5E-12 T 14-10-2018 VEJY3_24371 336a4144ced068dac063c639814ff798 673 Gene3D G3DSA:3.40.50.11040 3 167 1.8E-15 T 14-10-2018 VEJY3_24371 336a4144ced068dac063c639814ff798 673 Pfam PF05127 Helicase 176 343 2.7E-57 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VEJY3_24371 336a4144ced068dac063c639814ff798 673 Gene3D G3DSA:3.40.50.12320 174 333 5.8E-46 T 14-10-2018 VEJY3_24371 336a4144ced068dac063c639814ff798 673 SUPERFAMILY SSF52540 141 287 4.56E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24371 336a4144ced068dac063c639814ff798 673 Pfam PF08351 Domain of unknown function (DUF1726) 68 135 3.4E-6 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VEJY3_24371 336a4144ced068dac063c639814ff798 673 SUPERFAMILY SSF55729 380 539 3.3E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_24371 336a4144ced068dac063c639814ff798 673 Pfam PF13718 GNAT acetyltransferase 2 378 490 7.8E-20 T 14-10-2018 IPR000182 GNAT domain VEJY3_24371 336a4144ced068dac063c639814ff798 673 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 671 39.954 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VEJY3_24371 336a4144ced068dac063c639814ff798 673 Gene3D G3DSA:3.40.630.30 337 540 1.0E-64 T 14-10-2018 VEJY3_13770 76bb46a34e3d4d5763dfb1058d2c0d65 1292 Pfam PF13116 Protein of unknown function 506 792 9.8E-92 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 VEJY3_13770 76bb46a34e3d4d5763dfb1058d2c0d65 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 1.0E-55 T 14-10-2018 IPR032712 AsmA-like, C-terminal VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 Pfam PF02223 Thymidylate kinase 8 198 3.5E-58 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 SUPERFAMILY SSF52540 1 208 1.01E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.797 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 Gene3D G3DSA:3.40.50.300 3 208 6.7E-63 T 14-10-2018 VEJY3_10660 00c1e5490502087325c9412fa5c6158f 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 5.1E-62 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEJY3_06085 3c113005fa7cbad29a1378475e41d617 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 3.9E-29 T 14-10-2018 IPR032093 Phospholipase D, N-terminal VEJY3_06085 3c113005fa7cbad29a1378475e41d617 557 Pfam PF09423 PhoD-like phosphatase 136 528 6.2E-118 T 14-10-2018 IPR018946 Alkaline phosphatase D-related VEJY3_06085 3c113005fa7cbad29a1378475e41d617 557 SUPERFAMILY SSF56300 136 532 5.82E-32 T 14-10-2018 VEJY3_06085 3c113005fa7cbad29a1378475e41d617 557 Gene3D G3DSA:2.60.40.380 30 127 4.0E-33 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VEJY3_06085 3c113005fa7cbad29a1378475e41d617 557 Gene3D G3DSA:3.60.21.70 128 554 5.0E-123 T 14-10-2018 IPR038607 PhoD-like superfamily VEJY3_01305 dfbb8601af9124e0adccbfe89963375b 110 SUPERFAMILY SSF54843 1 109 3.92E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01305 dfbb8601af9124e0adccbfe89963375b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01305 dfbb8601af9124e0adccbfe89963375b 110 Gene3D G3DSA:3.90.470.10 1 110 5.5E-49 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01305 dfbb8601af9124e0adccbfe89963375b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.69 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01305 dfbb8601af9124e0adccbfe89963375b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.9E-40 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Gene3D G3DSA:3.40.50.300 339 811 8.6E-192 T 14-10-2018 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.922 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 14-10-2018 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Gene3D G3DSA:1.10.10.160 79 187 4.9E-128 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Gene3D G3DSA:3.40.50.10930 4 321 4.9E-128 T 14-10-2018 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 SUPERFAMILY SSF52980 838 1145 9.65E-75 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 SUPERFAMILY SSF52540 2 351 4.67E-126 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Gene3D G3DSA:1.10.10.990 878 956 3.5E-22 T 14-10-2018 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 PIRSF PIRSF000980 1 1160 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 Gene3D G3DSA:1.10.486.10 457 669 8.6E-192 T 14-10-2018 VEJY3_12345 4a40d0ab632036fd9cecf0bfc058f8eb 1163 SUPERFAMILY SSF52540 371 815 4.14E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_08120 63ccc047d2016698f04b504eb445076d 320 Pfam PF00535 Glycosyl transferase family 2 6 170 3.7E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_08120 63ccc047d2016698f04b504eb445076d 320 Gene3D G3DSA:3.90.550.10 1 189 1.2E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_08120 63ccc047d2016698f04b504eb445076d 320 SUPERFAMILY SSF53448 5 299 9.15E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_02195 e2cdc05949fb0ec3c6b5cc66e45ab7a8 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 7.3E-17 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VEJY3_02195 e2cdc05949fb0ec3c6b5cc66e45ab7a8 319 SUPERFAMILY SSF102114 13 268 9.81E-50 T 14-10-2018 VEJY3_02195 e2cdc05949fb0ec3c6b5cc66e45ab7a8 319 Pfam PF04055 Radical SAM superfamily 43 202 1.4E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_02195 e2cdc05949fb0ec3c6b5cc66e45ab7a8 319 Gene3D G3DSA:3.80.30.20 42 279 8.0E-18 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEJY3_02195 e2cdc05949fb0ec3c6b5cc66e45ab7a8 319 SMART SM00729 23 247 1.4E-46 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_16226 215e58cb08ae80b124c595dbdcb3b796 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 27.859 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VEJY3_16226 215e58cb08ae80b124c595dbdcb3b796 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 1.3E-67 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VEJY3_16226 215e58cb08ae80b124c595dbdcb3b796 199 Gene3D G3DSA:3.40.1280.10 1 199 7.1E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_16226 215e58cb08ae80b124c595dbdcb3b796 199 SUPERFAMILY SSF75217 1 198 5.23E-67 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_20651 c214125ab0968b580bbc03acbff31b75 292 SUPERFAMILY SSF103481 42 143 1.7E-10 T 14-10-2018 VEJY3_20651 c214125ab0968b580bbc03acbff31b75 292 SUPERFAMILY SSF103481 182 285 1.24E-14 T 14-10-2018 VEJY3_20651 c214125ab0968b580bbc03acbff31b75 292 Pfam PF00892 EamA-like transporter family 150 279 3.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_20651 c214125ab0968b580bbc03acbff31b75 292 Pfam PF00892 EamA-like transporter family 8 138 5.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_13765 38d22efb80f9afafee8b9912a670361f 273 Gene3D G3DSA:3.60.110.10 1 268 4.7E-91 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_13765 38d22efb80f9afafee8b9912a670361f 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 3.9E-55 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_13765 38d22efb80f9afafee8b9912a670361f 273 SUPERFAMILY SSF56317 3 263 4.32E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_13765 38d22efb80f9afafee8b9912a670361f 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VEJY3_01100 f748b112915ace14fdf2457170e58b38 504 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 345 486 1.3E-8 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VEJY3_01100 f748b112915ace14fdf2457170e58b38 504 Pfam PF13440 Polysaccharide biosynthesis protein 52 344 8.8E-82 T 14-10-2018 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 SMART SM00862 156 232 3.6E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 SMART SM00448 4 114 2.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 Gene3D G3DSA:1.10.10.10 123 236 5.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 SUPERFAMILY SSF52172 2 130 3.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 SUPERFAMILY SSF46894 137 233 8.79E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_02210 4e09913cc6f932de57cafc44926ac869 238 Gene3D G3DSA:3.40.50.2300 2 122 4.4E-33 T 14-10-2018 VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 PIRSF PIRSF039085 4 243 3.7E-103 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 SUPERFAMILY SSF52540 7 237 3.03E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 SMART SM00382 32 215 7.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 Gene3D G3DSA:3.40.50.300 5 244 1.0E-77 T 14-10-2018 VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 Pfam PF00005 ABC transporter 23 167 2.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_20126 262255aeae2b8740f89fcbc04f537f98 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.792 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 PIRSF PIRSF000525 2 364 1.4E-152 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 Gene3D G3DSA:3.40.640.10 21 261 2.0E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 Pfam PF00266 Aminotransferase class-V 8 352 5.7E-63 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 SUPERFAMILY SSF53383 7 361 4.16E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_06020 ef233a005b97f40cb4de8fd197b4a99c 364 Gene3D G3DSA:3.90.1150.10 262 364 2.3E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_21061 a559ff399d58fcae0c527b0d6f3d86e7 98 Pfam PF02954 Bacterial regulatory protein, Fis family 66 92 3.7E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_21061 a559ff399d58fcae0c527b0d6f3d86e7 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 59 76 4.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_21061 a559ff399d58fcae0c527b0d6f3d86e7 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 76 96 4.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_21061 a559ff399d58fcae0c527b0d6f3d86e7 98 Gene3D G3DSA:1.10.10.60 7 94 2.1E-8 T 14-10-2018 VEJY3_21061 a559ff399d58fcae0c527b0d6f3d86e7 98 SUPERFAMILY SSF46689 22 92 6.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 289 5.3E-40 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 SUPERFAMILY SSF55073 138 290 1.96E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 Gene3D G3DSA:3.30.70.270 126 297 1.7E-44 T 14-10-2018 VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 Gene3D G3DSA:3.30.450.20 2 123 2.6E-17 T 14-10-2018 VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 Pfam PF13426 PAS domain 16 120 6.4E-9 T 14-10-2018 IPR000014 PAS domain VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 SMART SM00267 122 297 3.5E-40 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 SUPERFAMILY SSF55785 16 130 4.35E-13 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_20906 23165c9b7f33e0a619804a73c7844cde 307 SMART SM00091 5 71 2.3E-4 T 14-10-2018 IPR000014 PAS domain VEJY3_16491 a46b75efab58cf67fa8297758b33ab90 425 SUPERFAMILY SSF51338 43 391 7.62E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_16491 a46b75efab58cf67fa8297758b33ab90 425 Gene3D G3DSA:3.20.20.140 59 364 1.7E-120 T 14-10-2018 VEJY3_16491 a46b75efab58cf67fa8297758b33ab90 425 Gene3D G3DSA:2.30.40.10 22 402 1.7E-120 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_16491 a46b75efab58cf67fa8297758b33ab90 425 Pfam PF07969 Amidohydrolase family 160 402 1.3E-15 T 14-10-2018 IPR013108 Amidohydrolase 3 VEJY3_16491 a46b75efab58cf67fa8297758b33ab90 425 SUPERFAMILY SSF51556 58 374 1.55E-75 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_15060 7ebbf2075a864494657a1674e253bc9a 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 4.3E-9 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site VEJY3_06470 0f787608d9d3001e13d76dee39dd3040 350 SUPERFAMILY SSF81345 15 346 3.92E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_06470 0f787608d9d3001e13d76dee39dd3040 350 Gene3D G3DSA:1.10.3470.10 16 350 6.6E-88 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_06470 0f787608d9d3001e13d76dee39dd3040 350 Pfam PF01032 FecCD transport family 30 346 1.9E-79 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 Gene3D G3DSA:1.10.560.10 8 521 4.5E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 SUPERFAMILY SSF54849 137 203 9.84E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 Gene3D G3DSA:3.30.260.10 136 410 4.5E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 SUPERFAMILY SSF48592 7 521 2.91E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.5E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.5E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.5E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.5E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.5E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.5E-99 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 Gene3D G3DSA:3.50.7.10 192 372 4.5E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 SUPERFAMILY SSF52029 184 376 8.02E-80 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VEJY3_16686 13891c5ec2191a57b174329fa5c76f0b 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.741 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEJY3_23651 b8ab6955152d9785e3ee686477a4271a 162 Pfam PF00583 Acetyltransferase (GNAT) family 36 149 6.8E-15 T 14-10-2018 IPR000182 GNAT domain VEJY3_23651 b8ab6955152d9785e3ee686477a4271a 162 Gene3D G3DSA:3.40.630.30 6 161 1.5E-25 T 14-10-2018 VEJY3_23651 b8ab6955152d9785e3ee686477a4271a 162 SUPERFAMILY SSF55729 1 156 7.38E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 3.4E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SUPERFAMILY SSF81923 1 142 3.79E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SUPERFAMILY SSF52540 170 428 1.65E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SMART SM00382 209 354 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SMART SM00382 490 657 5.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 2.1E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SUPERFAMILY SSF52540 440 739 6.04E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 SMART SM01086 656 745 9.1E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 1.2E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Gene3D G3DSA:3.40.50.300 442 655 6.6E-76 T 14-10-2018 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 14-10-2018 IPR004176 Clp, N-terminal VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Gene3D G3DSA:1.10.1780.10 1 143 8.2E-43 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Gene3D G3DSA:1.10.8.60 656 756 4.3E-30 T 14-10-2018 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Gene3D G3DSA:3.40.50.300 159 353 1.5E-62 T 14-10-2018 VEJY3_04715 2c295d0ccbb09cdfc221585f328fb0ee 756 Gene3D G3DSA:1.10.8.60 354 441 2.7E-34 T 14-10-2018 VEJY3_11985 b0d823dee4d7bce53d4b63a5c5c7cac1 103 SUPERFAMILY SSF46626 4 103 5.16E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_11985 b0d823dee4d7bce53d4b63a5c5c7cac1 103 Gene3D G3DSA:1.10.760.10 23 103 4.7E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_11985 b0d823dee4d7bce53d4b63a5c5c7cac1 103 Pfam PF00034 Cytochrome c 33 102 5.8E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_00915 ac5344a4efbf1ff5426b1fec10b6253a 128 Pfam PF01219 Prokaryotic diacylglycerol kinase 26 126 6.2E-33 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_00915 ac5344a4efbf1ff5426b1fec10b6253a 128 Gene3D G3DSA:1.10.3830.10 12 128 2.1E-37 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_00915 ac5344a4efbf1ff5426b1fec10b6253a 128 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 79 90 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 7.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 SUPERFAMILY SSF46689 3 72 1.5E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 8.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 8.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 Gene3D G3DSA:1.10.357.10 49 193 4.6E-19 T 14-10-2018 VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 SUPERFAMILY SSF48498 82 193 7.28E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_15946 e047873f2655b19792248c67bf1c7aca 196 Gene3D G3DSA:1.10.10.60 1 47 4.1E-20 T 14-10-2018 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 SUPERFAMILY SSF46894 125 220 3.97E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 SMART SM00448 3 111 7.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 SMART SM00862 149 220 1.4E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 Gene3D G3DSA:1.10.10.10 127 222 8.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 Pfam PF00072 Response regulator receiver domain 6 112 3.7E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-28 T 14-10-2018 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 220 1.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_19791 87193514d7cbe600783d81b393c4cc52 222 SUPERFAMILY SSF52172 4 116 1.85E-27 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 120 193 9.2E-8 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 PIRSF PIRSF000292 1 264 2.2E-120 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 SUPERFAMILY SSF49503 91 252 1.95E-49 T 14-10-2018 IPR008972 Cupredoxin VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 SUPERFAMILY SSF81464 1 88 2.78E-23 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 Gene3D G3DSA:2.60.40.420 85 253 1.8E-54 T 14-10-2018 IPR008972 Cupredoxin VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 Pfam PF06481 COX Aromatic Rich Motif 211 255 7.9E-13 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 VEJY3_20581 9811b3445a750ffd9a36c9673af8e46a 265 Gene3D G3DSA:1.10.287.90 1 84 2.4E-33 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_15996 aafaeeb0872aff8fd6bcb524e08e6b72 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.8E-60 T 14-10-2018 VEJY3_15996 aafaeeb0872aff8fd6bcb524e08e6b72 267 SUPERFAMILY SSF56784 4 265 4.27E-66 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_15996 aafaeeb0872aff8fd6bcb524e08e6b72 267 Gene3D G3DSA:3.30.1240.10 85 190 8.9E-78 T 14-10-2018 VEJY3_15996 aafaeeb0872aff8fd6bcb524e08e6b72 267 Gene3D G3DSA:3.40.50.1000 9 260 8.9E-78 T 14-10-2018 IPR023214 HAD superfamily VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01275 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 PIRSF PIRSF006232 3 282 2.1E-85 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 Gene3D G3DSA:2.60.120.10 143 249 6.0E-86 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 Pfam PF02678 Pirin 24 121 2.1E-32 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 Gene3D G3DSA:2.60.120.10 18 275 6.0E-86 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 2.3E-28 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VEJY3_17361 423ff4d018516d6cffb8134b475b690e 282 SUPERFAMILY SSF51182 7 280 3.2E-74 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 Gene3D G3DSA:3.40.47.10 126 398 5.6E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 SUPERFAMILY SSF53901 271 399 1.47E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 Gene3D G3DSA:3.40.47.10 6 276 5.6E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.0E-99 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 PIRSF PIRSF000429 1 402 1.7E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 SUPERFAMILY SSF53901 4 270 3.01E-85 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_17606 1d84804e959963e9463d44530d060ec1 402 Pfam PF02803 Thiolase, C-terminal domain 270 399 7.7E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Gene3D G3DSA:1.20.58.850 621 831 3.6E-135 T 14-10-2018 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.905 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 9.8E-15 T 14-10-2018 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Gene3D G3DSA:3.40.1140.10 1 227 3.6E-97 T 14-10-2018 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Pfam PF04310 MukB N-terminal 2 227 1.0E-120 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Gene3D G3DSA:1.20.58.850 583 853 3.6E-135 T 14-10-2018 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Pfam PF16330 MukB hinge domain 647 811 3.7E-73 T 14-10-2018 IPR032520 MukB, hinge domain VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Gene3D G3DSA:3.40.1140.10 1383 1469 2.1E-38 T 14-10-2018 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 SUPERFAMILY SSF52540 26 224 4.04E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 PIRSF PIRSF005246 1 1487 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEJY3_04820 995f8ad59bc1456b44a0fe785ee51741 1487 Gene3D G3DSA:1.20.1060.30 668 779 3.6E-135 T 14-10-2018 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 SUPERFAMILY SSF81343 7 125 6.32E-50 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 Gene3D G3DSA:1.20.1300.10 6 125 3.0E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 PIRSF PIRSF000179 6 125 1.9E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.525 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 8.0E-48 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEJY3_14475 ce0a4363a0d8379b1b891731ca566408 125 Pfam PF02313 Fumarate reductase subunit D 11 123 1.7E-44 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 Pfam PF00583 Acetyltransferase (GNAT) family 40 122 6.4E-12 T 14-10-2018 IPR000182 GNAT domain VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 SUPERFAMILY SSF54637 154 296 3.58E-41 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 SUPERFAMILY SSF55729 2 156 5.85E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 Gene3D G3DSA:3.10.129.10 147 298 1.0E-47 T 14-10-2018 VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 3.9E-53 T 14-10-2018 IPR012660 Thioesterase, putative VEJY3_00580 b8c9eba01436b20d55447a5c4524fa51 305 Gene3D G3DSA:3.40.630.30 3 145 3.7E-28 T 14-10-2018 VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 Pfam PF03887 YfbU domain 1 166 2.4E-67 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 Gene3D G3DSA:1.10.3190.10 54 166 2.0E-35 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 SUPERFAMILY SSF116960 1 166 4.71E-63 T 14-10-2018 VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 Gene3D G3DSA:1.10.287.680 1 53 3.2E-31 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 PIRSF PIRSF006272 1 166 5.0E-76 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-88 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEJY3_04585 19ba1b86a2839e011d66c1166b0e1b7b 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.347 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEJY3_18771 90edaae88bf0562ff02ee7242d5fe0e5 249 PIRSF PIRSF004846 2 249 5.2E-49 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VEJY3_18771 90edaae88bf0562ff02ee7242d5fe0e5 249 Pfam PF13531 Bacterial extracellular solute-binding protein 27 246 1.2E-36 T 14-10-2018 VEJY3_18771 90edaae88bf0562ff02ee7242d5fe0e5 249 Gene3D G3DSA:3.40.190.10 104 208 1.7E-66 T 14-10-2018 VEJY3_18771 90edaae88bf0562ff02ee7242d5fe0e5 249 SUPERFAMILY SSF53850 25 247 3.39E-51 T 14-10-2018 VEJY3_18771 90edaae88bf0562ff02ee7242d5fe0e5 249 Gene3D G3DSA:3.40.190.10 31 246 1.7E-66 T 14-10-2018 VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 4.2E-134 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 5.2E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 SUPERFAMILY SSF51735 2 142 3.69E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 238 3.5E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 SUPERFAMILY SSF55347 124 287 8.5E-37 T 14-10-2018 VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 Gene3D G3DSA:3.30.360.10 138 268 7.2E-96 T 14-10-2018 VEJY3_21336 b832d2b76c04f5c1de32c1e032b2867b 328 Gene3D G3DSA:3.40.50.720 5 322 7.2E-96 T 14-10-2018 VEJY3_23846 572a99877a10ea3239e471fb28cc8eab 512 Gene3D G3DSA:1.20.1250.20 1 186 1.5E-10 T 14-10-2018 VEJY3_23846 572a99877a10ea3239e471fb28cc8eab 512 Gene3D G3DSA:1.20.1250.20 265 502 6.2E-6 T 14-10-2018 VEJY3_23846 572a99877a10ea3239e471fb28cc8eab 512 SUPERFAMILY SSF103473 6 191 4.58E-15 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_23846 572a99877a10ea3239e471fb28cc8eab 512 SUPERFAMILY SSF103473 204 420 1.23E-6 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_23846 572a99877a10ea3239e471fb28cc8eab 512 Pfam PF07690 Major Facilitator Superfamily 10 409 4.5E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 SUPERFAMILY SSF52540 77 355 3.26E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.6E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 6.6E-249 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Gene3D G3DSA:1.10.1140.10 352 467 7.5E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 SUPERFAMILY SSF47917 352 466 4.19E-51 T 14-10-2018 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.904 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Gene3D G3DSA:3.40.50.300 76 351 9.5E-111 T 14-10-2018 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Gene3D G3DSA:2.40.10.170 2 75 8.9E-30 T 14-10-2018 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 SUPERFAMILY SSF50615 1 75 2.33E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 SMART SM00382 142 334 2.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15450 47bc5f2ca17cf4174d01951b37767011 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 3.3E-60 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 SUPERFAMILY SSF103473 11 466 3.66E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 Gene3D G3DSA:1.20.1250.20 10 194 2.3E-40 T 14-10-2018 VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 Gene3D G3DSA:1.20.1250.20 284 477 7.1E-38 T 14-10-2018 VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 Pfam PF07690 Major Facilitator Superfamily 22 232 5.0E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 Pfam PF07690 Major Facilitator Superfamily 301 476 1.1E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_18671 36dbbda4c44f074bce4d030b7e555eb0 489 ProSitePatterns PS00216 Sugar transport proteins signature 1. 349 366 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 SUPERFAMILY SSF46785 15 101 2.14E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 2.2E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 6.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 6.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 6.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 SMART SM00418 20 98 6.9E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_19666 e4066502253db45e731f44efac4ec4b3 102 Gene3D G3DSA:1.10.10.10 8 102 9.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Gene3D G3DSA:3.50.50.60 110 246 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.4E-15 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.4E-15 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.4E-15 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.4E-15 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-15 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.8E-8 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.8E-8 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.8E-8 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.8E-8 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 SUPERFAMILY SSF51905 3 184 2.11E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 SUPERFAMILY SSF56014 634 809 6.02E-47 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 769 8.1E-15 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Gene3D G3DSA:3.50.50.60 7 283 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 SUPERFAMILY SSF51905 145 310 6.37E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 2.8E-10 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Gene3D G3DSA:3.30.413.10 632 794 1.6E-31 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 14-10-2018 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 SUPERFAMILY SSF55124 503 630 5.09E-30 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_19561 fdbcde7231b03e251105b85d2d0dcfe6 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 3.0E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.293 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 PIRSF PIRSF000484 1 396 7.0E-67 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 SUPERFAMILY SSF54675 8 145 5.49E-36 T 14-10-2018 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 SUPERFAMILY SSF51690 129 409 4.12E-86 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 2.5E-79 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VEJY3_16746 31891d96573ccf0893481bf95b7b0156 436 Gene3D G3DSA:3.20.140.10 1 427 3.8E-162 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.931 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.0E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 4.3E-29 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PIRSF PIRSF000350 2 463 3.5E-68 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Gene3D G3DSA:3.30.390.30 345 464 4.1E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Gene3D G3DSA:3.50.50.60 158 276 1.0E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 Gene3D G3DSA:3.50.50.60 7 333 1.0E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.4E-27 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.4E-27 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.4E-27 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-27 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.4E-27 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 SUPERFAMILY SSF51905 5 319 1.04E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 SUPERFAMILY SSF55424 345 463 4.47E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-51 T 14-10-2018 VEJY3_14870 c8c8c4bc596fa421c681ce4d6cb9b34c 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-51 T 14-10-2018 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 Gene3D G3DSA:3.40.1410.10 89 244 2.5E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 Gene3D G3DSA:1.10.10.10 17 84 4.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 SUPERFAMILY SSF46785 20 84 1.04E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 Pfam PF07702 UTRA domain 101 239 4.3E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 SMART SM00866 100 239 3.6E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 SUPERFAMILY SSF64288 67 242 2.36E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.3E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16881 65314e2a3e6861f176675d2edc40208f 246 SMART SM00345 20 79 6.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_13705 f47c47bf6d4e46fff3fe88ab2c00740e 148 SUPERFAMILY SSF55804 1 145 8.11E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_13705 f47c47bf6d4e46fff3fe88ab2c00740e 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 7.4E-51 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VEJY3_13705 f47c47bf6d4e46fff3fe88ab2c00740e 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 2.7E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_13705 f47c47bf6d4e46fff3fe88ab2c00740e 148 Gene3D G3DSA:3.40.930.10 1 148 2.9E-52 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_13705 f47c47bf6d4e46fff3fe88ab2c00740e 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_17396 5c2e41b05af546af9a976ba52982b9ec 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_17396 5c2e41b05af546af9a976ba52982b9ec 118 Gene3D G3DSA:1.10.3830.10 3 118 9.2E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_17396 5c2e41b05af546af9a976ba52982b9ec 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 2.2E-34 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SUPERFAMILY SSF53150 114 266 3.53E-41 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SMART SM00533 283 590 1.9E-108 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Gene3D G3DSA:3.30.420.110 127 261 1.1E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 PIRSF PIRSF037677 187 830 5.5E-132 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 PIRSF PIRSF037677 1 181 7.0E-28 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SUPERFAMILY SSF52540 566 797 1.21E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Gene3D G3DSA:3.40.50.300 567 852 4.0E-101 T 14-10-2018 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Pfam PF05188 MutS domain II 128 253 4.2E-31 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.292 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SMART SM00534 606 793 1.4E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Gene3D G3DSA:1.10.1420.10 266 558 1.8E-104 T 14-10-2018 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Pfam PF00488 MutS domain V 609 796 3.5E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Gene3D G3DSA:1.10.1420.10 386 502 1.8E-104 T 14-10-2018 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Pfam PF05190 MutS family domain IV 427 517 4.8E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SUPERFAMILY SSF48334 267 564 6.15E-93 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Pfam PF05192 MutS domain III 269 558 9.0E-41 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Pfam PF01624 MutS domain I 8 119 1.2E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 SUPERFAMILY SSF55271 4 113 1.31E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 Gene3D G3DSA:3.40.1170.10 1 121 2.1E-52 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEJY3_13170 b0f6b72bbab31b0dc4360f6ff47e76d6 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 Gene3D G3DSA:3.10.290.10 8 75 2.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 8.1E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 Gene3D G3DSA:3.30.2350.10 93 314 6.6E-78 T 14-10-2018 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 SUPERFAMILY SSF55120 92 309 1.04E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 SUPERFAMILY SSF55174 19 70 5.21E-9 T 14-10-2018 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 SMART SM00363 20 77 9.5E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_10720 dda4ce85b67582643dd85ac05dd8a1fb 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 SUPERFAMILY SSF52172 6 156 3.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 SUPERFAMILY SSF55073 156 317 2.43E-41 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 311 2.0E-42 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 Gene3D G3DSA:3.40.50.2300 1 140 3.4E-33 T 14-10-2018 VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 SMART SM00448 8 120 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 Pfam PF00072 Response regulator receiver domain 10 117 1.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 SMART SM00267 140 316 1.3E-49 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19756 c51beb89b5d01eb1fc365874f2bef6fd 319 Gene3D G3DSA:3.30.70.270 141 318 1.5E-48 T 14-10-2018 VEJY3_17616 edd153c77ff06e050490fd6c4c2e04d8 589 SUPERFAMILY SSF53474 224 526 6.04E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17616 edd153c77ff06e050490fd6c4c2e04d8 589 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 9.7E-73 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VEJY3_17616 edd153c77ff06e050490fd6c4c2e04d8 589 Gene3D G3DSA:3.40.50.1820 227 514 1.9E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 SUPERFAMILY SSF53067 200 377 5.02E-49 T 14-10-2018 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.2E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 SUPERFAMILY SSF100920 384 537 8.37E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 SUPERFAMILY SSF53067 19 196 1.26E-49 T 14-10-2018 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Gene3D G3DSA:3.90.640.10 238 311 1.5E-110 T 14-10-2018 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Pfam PF00012 Hsp70 protein 22 601 1.5E-189 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Gene3D G3DSA:3.30.420.40 23 374 1.5E-110 T 14-10-2018 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 SUPERFAMILY SSF100934 504 616 9.81E-34 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Gene3D G3DSA:3.30.420.40 194 361 1.5E-110 T 14-10-2018 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Gene3D G3DSA:1.20.1270.10 521 616 1.0E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Gene3D G3DSA:2.60.34.10 379 520 6.8E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEJY3_02745 3a22074dab3aee38c75596f539c24884 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.301 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 Pfam PF01965 DJ-1/PfpI family 46 183 2.0E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 SUPERFAMILY SSF52317 8 201 1.2E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 Gene3D G3DSA:1.10.10.60 217 323 3.3E-26 T 14-10-2018 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 Gene3D G3DSA:3.40.50.880 5 211 4.8E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 SMART SM00342 237 320 7.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 SUPERFAMILY SSF46689 273 322 2.04E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 SUPERFAMILY SSF46689 220 271 3.76E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_06535 af75be116d3905fee96dffc8c970c516 325 Pfam PF12833 Helix-turn-helix domain 244 321 2.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_00800 96070c62d9789dcbfcd3caf9e5ed554c 608 Gene3D G3DSA:3.10.105.10 321 542 2.3E-42 T 14-10-2018 VEJY3_00800 96070c62d9789dcbfcd3caf9e5ed554c 608 SUPERFAMILY SSF53850 41 561 2.26E-95 T 14-10-2018 VEJY3_00800 96070c62d9789dcbfcd3caf9e5ed554c 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 2.7E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_00800 96070c62d9789dcbfcd3caf9e5ed554c 608 PIRSF PIRSF002741 1 566 3.9E-70 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_00800 96070c62d9789dcbfcd3caf9e5ed554c 608 Gene3D G3DSA:3.40.190.10 19 320 3.0E-46 T 14-10-2018 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 SUPERFAMILY SSF53098 14 225 3.74E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 SUPERFAMILY SSF47819 210 317 2.62E-23 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 SMART SM00474 19 187 5.3E-43 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 43.393 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Gene3D G3DSA:3.30.420.10 17 210 1.6E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Pfam PF01612 3'-5' exonuclease 19 186 8.7E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Gene3D G3DSA:1.10.150.80 212 309 1.3E-17 T 14-10-2018 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Gene3D G3DSA:1.10.150.80 310 388 1.8E-27 T 14-10-2018 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 SUPERFAMILY SSF47819 312 387 6.28E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEJY3_03970 c80a7bffa7effbe9e3fe3fd223baca13 388 Pfam PF00570 HRDC domain 229 295 1.5E-8 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 Gene3D G3DSA:3.30.9.10 134 362 1.3E-55 T 14-10-2018 VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 SUPERFAMILY SSF54373 270 360 4.58E-17 T 14-10-2018 VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 5.0E-73 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 Gene3D G3DSA:3.50.50.60 93 404 1.3E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 Gene3D G3DSA:3.40.50.720 1 75 1.9E-10 T 14-10-2018 VEJY3_02860 baff72be56c94571acc44cb9dd3d704d 418 SUPERFAMILY SSF51905 1 407 4.01E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 SUPERFAMILY SSF51366 1 228 2.86E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 Gene3D G3DSA:3.20.20.70 2 230 3.2E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.587 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 7.7E-52 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 SMART SM00934 5 226 1.6E-102 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_10540 2fe7057dd83c841c3603e1561c200b39 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_09165 e83d199568b4c92e559d81d50cec3905 360 Pfam PF04616 Glycosyl hydrolases family 43 87 168 1.2E-7 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 VEJY3_09165 e83d199568b4c92e559d81d50cec3905 360 Gene3D G3DSA:2.115.10.20 2 360 2.6E-136 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_09165 e83d199568b4c92e559d81d50cec3905 360 SUPERFAMILY SSF75005 49 315 1.96E-37 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 SUPERFAMILY SSF55021 662 737 1.19E-10 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 SMART SM00954 250 360 8.3E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Gene3D G3DSA:1.10.3210.10 49 205 1.0E-34 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Gene3D G3DSA:3.30.460.10 208 340 4.3E-49 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Pfam PF13291 ACT domain 661 737 2.0E-16 T 14-10-2018 IPR002912 ACT domain VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Pfam PF13328 HD domain 49 190 1.8E-35 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 SUPERFAMILY SSF81301 195 406 1.47E-62 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 SUPERFAMILY SSF109604 51 205 1.95E-41 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Gene3D G3DSA:3.30.70.260 660 739 1.3E-15 T 14-10-2018 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Gene3D G3DSA:3.10.20.30 396 469 1.0E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEJY3_13230 dc1533966e8cdbbd14c1506a94a352eb 739 SUPERFAMILY SSF81271 395 462 6.1E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEJY3_19446 6a15f587095653d47d698f316536cee7 117 SUPERFAMILY SSF55298 4 116 2.98E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_19446 6a15f587095653d47d698f316536cee7 117 Pfam PF01042 Endoribonuclease L-PSP 10 114 1.1E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEJY3_19446 6a15f587095653d47d698f316536cee7 117 Gene3D G3DSA:3.30.1330.40 1 117 1.4E-40 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 Gene3D G3DSA:3.90.190.20 288 419 1.8E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 SUPERFAMILY SSF53623 12 285 1.26E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 Pfam PF08245 Mur ligase middle domain 54 193 3.9E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 SUPERFAMILY SSF53244 288 416 4.58E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 3.0E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 PIRSF PIRSF001563 6 420 1.1E-105 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VEJY3_11270 a84a23fe7c7b44a919197f465f21d9af 420 Gene3D G3DSA:3.40.1190.10 1 287 2.2E-90 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 SMART SM00840 341 402 5.4E-28 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 Gene3D G3DSA:3.40.50.620 1 305 9.7E-138 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 SUPERFAMILY SSF47323 316 459 2.88E-40 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.311 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 Pfam PF09190 DALR domain 341 402 1.3E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 SUPERFAMILY SSF52374 1 313 1.13E-103 T 14-10-2018 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 6.2E-141 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VEJY3_05615 d94a541cdab53a44a3109daf0b45f5d7 460 Gene3D G3DSA:1.20.120.640 306 460 1.2E-50 T 14-10-2018 VEJY3_07240 76b1c8821d3e59cde7f88d1dabed74a8 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.3E-82 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VEJY3_07240 76b1c8821d3e59cde7f88d1dabed74a8 350 Gene3D G3DSA:1.20.950.20 118 337 4.8E-66 T 14-10-2018 VEJY3_07240 76b1c8821d3e59cde7f88d1dabed74a8 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 2.0E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VEJY3_07240 76b1c8821d3e59cde7f88d1dabed74a8 350 SUPERFAMILY SSF81342 119 333 1.18E-46 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEJY3_12635 310059730e955909de931e6747e4b77c 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.9E-9 T 14-10-2018 VEJY3_12635 310059730e955909de931e6747e4b77c 167 Gene3D G3DSA:3.40.630.30 1 167 3.8E-46 T 14-10-2018 VEJY3_12635 310059730e955909de931e6747e4b77c 167 SUPERFAMILY SSF55729 1 130 9.29E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 Gene3D G3DSA:2.102.10.10 47 172 6.7E-53 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 Gene3D G3DSA:3.90.380.10 263 395 1.8E-15 T 14-10-2018 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 390 1.6E-31 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 Pfam PF00355 Rieske [2Fe-2S] domain 49 133 3.8E-17 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 SUPERFAMILY SSF50022 16 167 2.36E-41 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 SUPERFAMILY SSF55961 169 392 1.1E-48 T 14-10-2018 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 Gene3D G3DSA:3.90.380.10 26 240 6.7E-53 T 14-10-2018 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 9.5E-19 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 9.5E-19 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 9.5E-19 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 9.5E-19 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_23216 2fa4131884087c384ef9afb8a6e9b66b 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 9.5E-19 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 4.9E-83 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 SUPERFAMILY SSF53748 3 382 1.77E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 Gene3D G3DSA:3.40.50.1260 10 379 9.0E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.1E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 Gene3D G3DSA:3.40.50.1260 165 373 9.0E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 PIRSF PIRSF000724 1 386 1.1E-133 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13385 a0a693a9fffd9a3ee5b86e9850f31806 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.362 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 SUPERFAMILY SSF53697 12 256 9.34E-75 T 14-10-2018 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 Pfam PF13580 SIS domain 49 172 1.7E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 Gene3D G3DSA:1.10.8.1080 226 304 1.2E-30 T 14-10-2018 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.866 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEJY3_02455 9d9aa226ed1b16e59582609f1fb6a4c5 308 Gene3D G3DSA:3.40.50.10490 8 225 3.1E-81 T 14-10-2018 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 Gene3D G3DSA:3.20.20.10 10 217 1.5E-134 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 SMART SM01005 233 357 2.2E-70 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 SUPERFAMILY SSF50621 226 356 3.03E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 SUPERFAMILY SSF51419 8 234 4.84E-71 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 Hamap MF_01201 Alanine racemase. 1 357 35.58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 26 42 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 120 132 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 339 352 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 192 219 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 287 304 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 266 281 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 60 78 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 155 166 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 PRINTS PR00992 Alanine racemase signature 249 264 1.3E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 TIGRFAM TIGR00492 alr: alanine racemase 4 356 4.2E-129 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.5E-71 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 3.0E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13990 e6066c51931086bd79bd03fddf58da4a 358 Gene3D G3DSA:2.40.37.10 8 352 1.5E-134 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_04095 db8a1363f4721b52ccfee68f1b7eb43f 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 125 201 2.3E-10 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_04095 db8a1363f4721b52ccfee68f1b7eb43f 242 Gene3D G3DSA:3.90.470.20 40 141 1.3E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_04095 db8a1363f4721b52ccfee68f1b7eb43f 242 SUPERFAMILY SSF56214 125 228 2.27E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_04095 db8a1363f4721b52ccfee68f1b7eb43f 242 PRINTS PR01399 Enterobactin synthetase component D signature 56 76 8.1E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VEJY3_04095 db8a1363f4721b52ccfee68f1b7eb43f 242 PRINTS PR01399 Enterobactin synthetase component D signature 163 179 8.1E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VEJY3_06310 14760f0714bae3e89931187f6ea0bc84 242 SUPERFAMILY SSF53335 6 219 6.75E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_06310 14760f0714bae3e89931187f6ea0bc84 242 Pfam PF13847 Methyltransferase domain 42 142 2.0E-22 T 14-10-2018 IPR025714 Methyltransferase domain VEJY3_06310 14760f0714bae3e89931187f6ea0bc84 242 Gene3D G3DSA:3.40.50.150 26 242 2.2E-67 T 14-10-2018 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.8E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 SUPERFAMILY SSF46785 1 79 5.83E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 Gene3D G3DSA:1.10.10.10 1 92 3.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 Gene3D G3DSA:3.40.190.10 162 265 1.7E-53 T 14-10-2018 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 Gene3D G3DSA:3.40.190.10 94 287 1.7E-53 T 14-10-2018 VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 Pfam PF03466 LysR substrate binding domain 93 289 5.4E-32 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17891 f9fa091c99f931c0835dac2b89dd8bfe 300 SUPERFAMILY SSF53850 91 289 1.27E-29 T 14-10-2018 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 Gene3D G3DSA:3.40.50.10490 98 291 1.4E-240 T 14-10-2018 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.085 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 Gene3D G3DSA:3.40.50.10490 12 506 1.4E-240 T 14-10-2018 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 Pfam PF00342 Phosphoglucose isomerase 52 541 6.6E-254 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 SUPERFAMILY SSF53697 5 547 8.9E-227 T 14-10-2018 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 Gene3D G3DSA:1.10.1390.10 507 549 5.9E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13980 f6ace58ed8a0fc8082ef4718f7e516a1 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 SUPERFAMILY SSF53067 2 246 4.12E-74 T 14-10-2018 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 PIRSF PIRSF000538 1 486 5.3E-134 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 Gene3D G3DSA:3.30.420.40 1 244 1.6E-85 T 14-10-2018 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 6.8E-73 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 SUPERFAMILY SSF53067 245 479 5.38E-58 T 14-10-2018 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 439 1.6E-33 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 Gene3D G3DSA:3.30.420.40 245 483 4.9E-74 T 14-10-2018 VEJY3_21371 778c8d524c7789b079f2f2f1ce36259f 486 TIGRFAM TIGR01312 XylB: xylulokinase 3 479 5.1E-187 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Pfam PF00732 GMC oxidoreductase 5 297 8.5E-87 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 60.205 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 SUPERFAMILY SSF51905 1 534 5.83E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Gene3D G3DSA:1.10.1220.110 97 150 5.6E-176 T 14-10-2018 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Gene3D G3DSA:3.50.50.60 5 530 5.6E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Gene3D G3DSA:3.30.410.40 151 471 5.6E-176 T 14-10-2018 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Gene3D G3DSA:4.10.450.10 38 198 5.6E-176 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 Pfam PF05199 GMC oxidoreductase 388 526 4.9E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 SUPERFAMILY SSF54373 292 474 6.38E-61 T 14-10-2018 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 PIRSF PIRSF000137 1 541 5.5E-147 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_18596 a76bee8fc6210de7680412479c13ff7c 566 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Gene3D G3DSA:3.30.450.20 62 173 2.9E-74 T 14-10-2018 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 SUPERFAMILY SSF103190 51 184 2.56E-16 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 SUPERFAMILY SSF58104 314 623 5.89E-76 T 14-10-2018 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 589 6.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 SMART SM00304 292 346 4.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Pfam PF00672 HAMP domain 292 343 1.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Pfam PF02743 Cache domain 34 254 8.0E-35 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 SMART SM00283 361 622 4.7E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Gene3D G3DSA:1.10.287.950 291 623 3.4E-72 T 14-10-2018 VEJY3_22056 e79f1ca82019b195fa835e172f800385 623 Gene3D G3DSA:3.30.450.20 49 266 2.9E-74 T 14-10-2018 VEJY3_08475 5d156952995a06ee60d7ee6845039153 87 Gene3D G3DSA:2.40.50.220 1 87 3.1E-31 T 14-10-2018 IPR036677 EutN/Ccml superfamily VEJY3_08475 5d156952995a06ee60d7ee6845039153 87 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.9E-30 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml VEJY3_08475 5d156952995a06ee60d7ee6845039153 87 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 83 2.0E-17 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml VEJY3_08475 5d156952995a06ee60d7ee6845039153 87 SUPERFAMILY SSF159133 1 86 3.14E-27 T 14-10-2018 IPR036677 EutN/Ccml superfamily VEJY3_00225 25701c7c51e786ab3288242b11f67473 314 SUPERFAMILY SSF161098 95 296 4.71E-25 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00225 25701c7c51e786ab3288242b11f67473 314 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 71 5.5E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEJY3_00225 25701c7c51e786ab3288242b11f67473 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 311 2.8E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_00225 25701c7c51e786ab3288242b11f67473 314 Gene3D G3DSA:1.10.3720.10 88 308 8.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00850 c5fc8bcb1956343599e237d1f9ddf0d4 316 PIRSF PIRSF026649 6 312 3.2E-77 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_00850 c5fc8bcb1956343599e237d1f9ddf0d4 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 4.8E-130 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEJY3_00850 c5fc8bcb1956343599e237d1f9ddf0d4 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 5.6E-70 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_00850 c5fc8bcb1956343599e237d1f9ddf0d4 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 42.9 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 Gene3D G3DSA:3.40.1030.10 67 321 2.9E-124 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 Gene3D G3DSA:1.20.970.10 10 183 2.9E-124 T 14-10-2018 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.826 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.4E-105 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 SUPERFAMILY SSF52418 70 329 2.09E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 SUPERFAMILY SSF47648 2 68 4.45E-19 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_10265 d3f780b42bb76a18bbb73978a04e5c8b 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 2.5E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 PIRSF PIRSF001461 1 223 3.1E-108 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 7.8E-101 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.4E-92 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 SUPERFAMILY SSF51366 4 218 4.43E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 Gene3D G3DSA:3.20.20.70 5 222 4.0E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEJY3_14025 acbd6aa491bac41eb966d8119e4a094f 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEJY3_18766 ee8697b053e4dd297ad93176b93172ff 278 SUPERFAMILY SSF109998 31 158 3.26E-10 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEJY3_18766 ee8697b053e4dd297ad93176b93172ff 278 SUPERFAMILY SSF54534 130 235 6.54E-20 T 14-10-2018 VEJY3_18766 ee8697b053e4dd297ad93176b93172ff 278 Gene3D G3DSA:1.10.4030.30 57 248 9.6E-34 T 14-10-2018 VEJY3_18766 ee8697b053e4dd297ad93176b93172ff 278 Gene3D G3DSA:3.10.50.40 138 239 9.6E-34 T 14-10-2018 VEJY3_18766 ee8697b053e4dd297ad93176b93172ff 278 Pfam PF00639 PPIC-type PPIASE domain 145 236 2.7E-14 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.024 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PIRSF PIRSF000513 4 263 9.7E-97 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 SUPERFAMILY SSF53613 6 261 2.46E-59 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 Pfam PF02110 Hydroxyethylthiazole kinase family 10 251 9.3E-73 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 Gene3D G3DSA:3.40.1190.20 1 264 4.3E-91 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16186 09fe1ef32990362f507d85acdda422ce 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.4E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01385 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 VEJY3_20801 05c5504045c9fbf041140ec4f2132584 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 305 2.9E-19 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VEJY3_20801 05c5504045c9fbf041140ec4f2132584 347 Pfam PF01548 Transposase 12 156 2.4E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 SUPERFAMILY SSF55031 177 284 4.64E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 PIRSF PIRSF005962 4 375 8.2E-94 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 Gene3D G3DSA:3.40.630.10 8 357 2.9E-95 T 14-10-2018 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 358 7.9E-62 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 SUPERFAMILY SSF53187 7 372 7.39E-60 T 14-10-2018 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 Pfam PF07687 Peptidase dimerisation domain 178 274 8.6E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 Gene3D G3DSA:3.30.70.360 174 286 2.9E-95 T 14-10-2018 VEJY3_07810 dd93131f705819f6a88b8ea91bf05f81 376 Pfam PF01546 Peptidase family M20/M25/M40 66 371 4.3E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Gene3D G3DSA:1.10.10.10 162 237 5.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 SUPERFAMILY SSF88659 219 318 1.68E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Gene3D G3DSA:1.10.601.10 2 158 2.1E-47 T 14-10-2018 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Gene3D G3DSA:1.10.10.10 245 323 3.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 SUPERFAMILY SSF88659 162 235 1.74E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 9 323 39.623 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_13175 fa51dfd594d041691692fdc127db79f6 328 Pfam PF04539 Sigma-70 region 3 169 242 2.0E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEJY3_10070 9041bbfa3ab7e4ab47f0cf503565a503 362 Gene3D G3DSA:3.40.190.170 38 348 1.5E-117 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_10070 9041bbfa3ab7e4ab47f0cf503565a503 362 PIRSF PIRSF039026 3 362 3.9E-143 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VEJY3_10070 9041bbfa3ab7e4ab47f0cf503565a503 362 Gene3D G3DSA:3.40.190.10 156 327 1.5E-117 T 14-10-2018 VEJY3_10070 9041bbfa3ab7e4ab47f0cf503565a503 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 3.5E-70 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_05885 00372df6d3df649c71231562d8fe1992 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 59 660 4.1E-162 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VEJY3_05885 00372df6d3df649c71231562d8fe1992 660 Gene3D G3DSA:2.40.170.20 318 536 1.9E-5 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_05885 00372df6d3df649c71231562d8fe1992 660 SUPERFAMILY SSF56935 278 443 6.31E-6 T 14-10-2018 VEJY3_05885 00372df6d3df649c71231562d8fe1992 660 SUPERFAMILY SSF56935 427 638 6.83E-9 T 14-10-2018 VEJY3_11935 6656191b69a73eae7aa591b81f3475c5 587 Pfam PF00916 Sulfate permease family 24 382 1.7E-82 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEJY3_11935 6656191b69a73eae7aa591b81f3475c5 587 Gene3D G3DSA:3.30.750.24 436 552 1.4E-19 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_11935 6656191b69a73eae7aa591b81f3475c5 587 Pfam PF01740 STAS domain 447 537 6.9E-15 T 14-10-2018 IPR002645 STAS domain VEJY3_11935 6656191b69a73eae7aa591b81f3475c5 587 SUPERFAMILY SSF52091 446 536 2.35E-12 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Gene3D G3DSA:2.40.30.10 206 334 1.3E-51 T 14-10-2018 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 SUPERFAMILY SSF50447 205 301 7.07E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Gene3D G3DSA:2.40.30.10 338 393 2.0E-29 T 14-10-2018 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 SUPERFAMILY SSF52540 6 219 1.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.4E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.381 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.4E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 Gene3D G3DSA:3.40.50.300 1 203 9.1E-70 T 14-10-2018 VEJY3_14800 5e32bc2ee45d3c8068c7aef4eb7d66aa 394 SUPERFAMILY SSF50465 298 393 1.3E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Pfam PF00696 Amino acid kinase family 2 284 6.8E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 SUPERFAMILY SSF55021 303 381 1.63E-22 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Gene3D G3DSA:3.40.50.720 467 811 1.7E-119 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.7E-47 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 SUPERFAMILY SSF53633 1 298 9.69E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Pfam PF01842 ACT domain 324 380 7.2E-10 T 14-10-2018 IPR002912 ACT domain VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 SUPERFAMILY SSF55347 614 797 4.58E-52 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.6E-27 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Gene3D G3DSA:1.20.120.1320 41 142 9.6E-88 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Pfam PF13840 ACT domain 393 454 2.1E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 SUPERFAMILY SSF55021 383 475 1.23E-21 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 SUPERFAMILY SSF51735 463 636 9.09E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Gene3D G3DSA:3.30.2130.10 302 464 7.2E-46 T 14-10-2018 VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Gene3D G3DSA:3.40.1160.10 3 295 9.6E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_02230 ae4f8f95c56c59b35124512de3d0ff06 819 Gene3D G3DSA:3.30.360.10 625 795 1.7E-119 T 14-10-2018 VEJY3_14015 1144bfd11a7bd243e3810f4628f9afec 100 Pfam PF00436 Single-strand binding protein family 3 88 1.1E-6 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VEJY3_14015 1144bfd11a7bd243e3810f4628f9afec 100 Gene3D G3DSA:2.40.50.140 1 100 1.5E-28 T 14-10-2018 VEJY3_14015 1144bfd11a7bd243e3810f4628f9afec 100 SUPERFAMILY SSF50249 1 99 4.11E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14015 1144bfd11a7bd243e3810f4628f9afec 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.556 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VEJY3_14015 1144bfd11a7bd243e3810f4628f9afec 100 PIRSF PIRSF003135 1 100 7.6E-46 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 392 556 1.0E-44 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 270 8.7E-10 T 14-10-2018 IPR000014 PAS domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 392 2.1E-22 T 14-10-2018 IPR000014 PAS domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Pfam PF08448 PAS fold 159 264 2.0E-11 T 14-10-2018 IPR013656 PAS fold-4 VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Pfam PF00563 EAL domain 574 808 1.4E-74 T 14-10-2018 IPR001633 EAL domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00267 385 558 1.0E-59 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Gene3D G3DSA:3.30.450.20 131 273 5.1E-23 T 14-10-2018 VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00091 148 214 3.0 T 14-10-2018 IPR000014 PAS domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00091 271 337 5.6E-8 T 14-10-2018 IPR000014 PAS domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Gene3D G3DSA:3.20.20.450 572 816 9.5E-100 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 PIRSF PIRSF005925 264 393 1.4E-11 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 PIRSF PIRSF005925 384 816 6.7E-139 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 PIRSF PIRSF005925 139 278 6.8E-4 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Gene3D G3DSA:3.30.70.270 395 571 4.6E-58 T 14-10-2018 VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SUPERFAMILY SSF141868 574 812 1.57E-86 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Pfam PF13426 PAS domain 282 383 9.2E-17 T 14-10-2018 IPR000014 PAS domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SUPERFAMILY SSF55785 154 264 2.97E-17 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 553 9.4E-46 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00052 568 814 5.0E-116 T 14-10-2018 IPR001633 EAL domain VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SUPERFAMILY SSF55785 279 382 4.01E-27 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00086 221 263 0.43 T 14-10-2018 IPR001610 PAC motif VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SMART SM00086 343 385 4.4E-8 T 14-10-2018 IPR001610 PAC motif VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 Gene3D G3DSA:3.30.450.20 274 394 3.6E-35 T 14-10-2018 VEJY3_00420 dd02f0763a37fd2ef871603c79ef3747 817 SUPERFAMILY SSF55073 401 560 1.65E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_11625 f25d02422c3eb839ada412d840150b29 144 SUPERFAMILY SSF160214 63 143 8.76E-22 T 14-10-2018 IPR035924 FlaG-like superfamily VEJY3_11625 f25d02422c3eb839ada412d840150b29 144 Pfam PF03646 FlaG protein 48 142 6.1E-24 T 14-10-2018 IPR005186 FlaG protein VEJY3_11625 f25d02422c3eb839ada412d840150b29 144 Gene3D G3DSA:3.30.160.170 43 141 3.7E-13 T 14-10-2018 IPR035924 FlaG-like superfamily VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 ProSitePatterns PS00149 Sulfatases signature 2. 100 110 - T 14-10-2018 IPR024607 Sulfatase, conserved site VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 Gene3D G3DSA:3.30.1120.10 405 474 9.1E-109 T 14-10-2018 VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 Pfam PF16385 Domain of unknown function 383 478 4.4E-22 T 14-10-2018 IPR032158 Domain of unknown function DUF4994 VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 SUPERFAMILY SSF53649 7 482 1.89E-120 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 Gene3D G3DSA:3.40.720.10 7 404 9.1E-109 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 ProSitePatterns PS00523 Sulfatases signature 1. 53 65 - T 14-10-2018 IPR024607 Sulfatase, conserved site VEJY3_24101 789363012f085604f2c12bd3cf27d3ef 488 Pfam PF00884 Sulfatase 7 378 2.4E-69 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_07165 78fed3966b02b225b753f0b4850c955c 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07165 78fed3966b02b225b753f0b4850c955c 239 Pfam PF00005 ABC transporter 25 165 1.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07165 78fed3966b02b225b753f0b4850c955c 239 SMART SM00382 29 202 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07165 78fed3966b02b225b753f0b4850c955c 239 SUPERFAMILY SSF52540 5 216 2.56E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07165 78fed3966b02b225b753f0b4850c955c 239 Gene3D G3DSA:3.40.50.300 1 238 3.3E-52 T 14-10-2018 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 522 549 0.11 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 274 2.7E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 SMART SM00382 325 529 7.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 SMART SM00382 46 246 9.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Pfam PF00005 ABC transporter 37 196 4.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 SUPERFAMILY SSF52540 310 542 2.09E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Pfam PF00005 ABC transporter 317 471 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 SUPERFAMILY SSF52540 19 267 2.43E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Gene3D G3DSA:3.40.50.300 16 296 2.5E-83 T 14-10-2018 VEJY3_21431 3697647e2b02f241515fa0a60afb50e2 551 Gene3D G3DSA:3.40.50.300 297 549 3.7E-64 T 14-10-2018 VEJY3_07090 dd58f486c77e07d30f9282c626f07420 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 9.5E-22 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein VEJY3_07090 dd58f486c77e07d30f9282c626f07420 64 PIRSF PIRSF037225 1 64 3.9E-25 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VEJY3_01250 a70a30f4c9f6fa377333d3ded104cf87 183 SUPERFAMILY SSF56235 2 172 4.07E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_01250 a70a30f4c9f6fa377333d3ded104cf87 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.32 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VEJY3_01250 a70a30f4c9f6fa377333d3ded104cf87 183 Gene3D G3DSA:3.60.20.10 1 173 6.4E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_01250 a70a30f4c9f6fa377333d3ded104cf87 183 Pfam PF00227 Proteasome subunit 2 170 2.1E-24 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VEJY3_01250 a70a30f4c9f6fa377333d3ded104cf87 183 PIRSF PIRSF039093 1 175 6.9E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VEJY3_19071 a44d3a14fd583f5a7a7677f4aee9e87e 141 SUPERFAMILY SSF53927 2 137 1.77E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_19071 a44d3a14fd583f5a7a7677f4aee9e87e 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEJY3_19071 a44d3a14fd583f5a7a7677f4aee9e87e 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 2.6E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEJY3_19071 a44d3a14fd583f5a7a7677f4aee9e87e 141 Gene3D G3DSA:3.40.140.10 1 140 2.0E-41 T 14-10-2018 VEJY3_07855 fd72f41a56abca2853ea98f81ab51b92 298 Gene3D G3DSA:3.20.20.60 2 298 3.9E-98 T 14-10-2018 VEJY3_07855 fd72f41a56abca2853ea98f81ab51b92 298 SUPERFAMILY SSF51621 5 294 8.07E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_07855 fd72f41a56abca2853ea98f81ab51b92 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VEJY3_07855 fd72f41a56abca2853ea98f81ab51b92 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 259 1.1E-46 T 14-10-2018 VEJY3_07855 fd72f41a56abca2853ea98f81ab51b92 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.461 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 Pfam PF00155 Aminotransferase class I and II 129 441 4.4E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 Gene3D G3DSA:1.10.10.10 18 87 6.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 2.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 2.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 SUPERFAMILY SSF53383 116 475 5.47E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 1.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 Gene3D G3DSA:3.40.640.10 108 471 2.6E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 SUPERFAMILY SSF46785 20 87 5.55E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17466 8ebfa568cec07749a61d177b7eb1548e 476 SMART SM00345 27 86 5.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 SMART SM01049 42 133 1.1E-31 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 Gene3D G3DSA:3.30.565.10 313 448 3.5E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 Pfam PF17200 Single Cache domain 2 45 192 8.4E-41 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 1.3E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 PIRSF PIRSF037314 1 450 1.9E-189 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 SUPERFAMILY SSF55874 320 443 6.55E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 Pfam PF07730 Histidine kinase 250 315 1.8E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 Gene3D G3DSA:3.30.450.20 28 203 1.7E-46 T 14-10-2018 VEJY3_10055 3ab59ef0f100f2a6aef44ba7ac058dfb 451 SMART SM00387 353 447 3.9E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_16326 444b767619b7a85948122de09ac2f1f2 401 SUPERFAMILY SSF103473 8 388 3.14E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_16326 444b767619b7a85948122de09ac2f1f2 401 Pfam PF07690 Major Facilitator Superfamily 15 354 8.5E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_16326 444b767619b7a85948122de09ac2f1f2 401 Gene3D G3DSA:1.20.1720.10 10 386 1.4E-97 T 14-10-2018 VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 SUPERFAMILY SSF52540 3 441 1.25E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 8.6E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 Gene3D G3DSA:1.10.8.60 335 440 2.1E-39 T 14-10-2018 VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 SMART SM00382 49 332 6.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.128 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 2.8E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 SMART SM01086 335 429 3.4E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VEJY3_01245 b6fe46f009554c3bdffe4f5f4c275fa3 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.3E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_08610 91dc0f1d7b7fccb2c55e3da42b45479b 312 SUPERFAMILY SSF51658 9 307 2.35E-43 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08610 91dc0f1d7b7fccb2c55e3da42b45479b 312 Gene3D G3DSA:3.20.20.150 1 310 1.4E-61 T 14-10-2018 VEJY3_08610 91dc0f1d7b7fccb2c55e3da42b45479b 312 Pfam PF07582 AP endonuclease family 2 C terminus 268 308 7.4E-8 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal VEJY3_08610 91dc0f1d7b7fccb2c55e3da42b45479b 312 Pfam PF01261 Xylose isomerase-like TIM barrel 19 262 1.9E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 9.9E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 Gene3D G3DSA:1.10.3860.10 3 406 4.2E-73 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 SUPERFAMILY SSF118215 15 399 1.7E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.553 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 4.9E-12 T 14-10-2018 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 4.9E-12 T 14-10-2018 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 4.9E-12 T 14-10-2018 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 4.9E-12 T 14-10-2018 VEJY3_23746 ecfe1b59e49653fda7a99bbc2964be14 406 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 4.9E-12 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 SUPERFAMILY SSF46977 444 583 1.83E-43 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.8E-9 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 4.8E-9 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 SUPERFAMILY SSF51905 3 439 2.0E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 SUPERFAMILY SSF56425 227 358 3.59E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Pfam PF00890 FAD binding domain 7 397 3.6E-113 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Gene3D G3DSA:1.20.58.100 424 538 5.5E-35 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Gene3D G3DSA:3.90.700.10 237 363 5.3E-162 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.3E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Gene3D G3DSA:4.10.80.40 543 577 3.5E-17 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 Gene3D G3DSA:3.50.50.60 7 409 5.3E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 14-10-2018 VEJY3_14460 d788ccebe488fbc506082e6317fc328d 601 PIRSF PIRSF000171 1 573 3.5E-45 T 14-10-2018 VEJY3_03245 18b12e2fc6940ee3a9819229acc459e2 269 Gene3D G3DSA:3.40.190.10 34 263 2.2E-94 T 14-10-2018 VEJY3_03245 18b12e2fc6940ee3a9819229acc459e2 269 Pfam PF03180 NLPA lipoprotein 33 269 3.7E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family VEJY3_03245 18b12e2fc6940ee3a9819229acc459e2 269 PIRSF PIRSF002854 1 269 5.8E-100 T 14-10-2018 IPR004872 Lipoprotein NlpA family VEJY3_03245 18b12e2fc6940ee3a9819229acc459e2 269 Gene3D G3DSA:3.40.190.10 115 219 2.2E-94 T 14-10-2018 VEJY3_03245 18b12e2fc6940ee3a9819229acc459e2 269 SUPERFAMILY SSF53850 32 269 4.55E-79 T 14-10-2018 VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Gene3D G3DSA:3.40.50.880 440 671 4.0E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Gene3D G3DSA:2.60.40.1180 673 728 6.6E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Pfam PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain 9 439 1.5E-179 T 14-10-2018 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 674 726 8.7E-17 T 14-10-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Gene3D G3DSA:3.20.20.80 9 430 2.4E-181 T 14-10-2018 VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Gene3D G3DSA:2.60.40.10 76 180 2.4E-181 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 SUPERFAMILY SSF52317 479 665 1.56E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_24026 83b4d00796c57d17cd5b7a380632112d 728 Pfam PF17385 Lacto-N-biose phosphorylase central domain 444 668 1.1E-78 T 14-10-2018 IPR035363 Lacto-N-biose phosphorylase, central domain VEJY3_21736 35e9aaa75bb6a6c471dcb91b17512633 488 Pfam PF12792 CSS motif domain associated with EAL 33 215 2.3E-7 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VEJY3_21736 35e9aaa75bb6a6c471dcb91b17512633 488 Gene3D G3DSA:3.20.20.450 239 486 2.3E-76 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21736 35e9aaa75bb6a6c471dcb91b17512633 488 SMART SM00052 239 481 1.3E-77 T 14-10-2018 IPR001633 EAL domain VEJY3_21736 35e9aaa75bb6a6c471dcb91b17512633 488 SUPERFAMILY SSF141868 245 484 9.68E-73 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21736 35e9aaa75bb6a6c471dcb91b17512633 488 Pfam PF00563 EAL domain 245 476 3.2E-63 T 14-10-2018 IPR001633 EAL domain VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 SUPERFAMILY SSF52317 18 297 2.24E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.164 T 14-10-2018 IPR033752 MetA family VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 PIRSF PIRSF000450 1 309 1.4E-147 T 14-10-2018 IPR033752 MetA family VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-130 T 14-10-2018 VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 Gene3D G3DSA:3.40.50.880 1 301 7.8E-125 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_08210 85db0d50d8ccf0289cdb27a708a6c59a 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.7E-136 T 14-10-2018 IPR033752 MetA family VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 SUPERFAMILY SSF53659 4 361 9.98E-123 T 14-10-2018 VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 SMART SM01329 7 356 1.2E-203 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.378 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 4.8E-137 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEJY3_01685 cc81191d383f1c5c9ee042d9683f1f2c 363 Gene3D G3DSA:3.40.718.10 1 363 2.8E-158 T 14-10-2018 VEJY3_23956 366ede6f3a8627f08732b34dbd161ad4 139 Gene3D G3DSA:3.30.1330.40 5 128 6.6E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_23956 366ede6f3a8627f08732b34dbd161ad4 139 SUPERFAMILY SSF55298 4 127 1.56E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_23956 366ede6f3a8627f08732b34dbd161ad4 139 Pfam PF01042 Endoribonuclease L-PSP 11 125 4.1E-20 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEJY3_09580 37db9d0cac458196e70dea51913eb7c2 64 Pfam PF13737 Transposase DDE domain 1 62 6.2E-18 T 14-10-2018 IPR025668 Transposase DDE domain VEJY3_10780 58559dc4f34f940796ed890ce0a4be4e 161 Gene3D G3DSA:1.20.1550.10 1 160 1.2E-55 T 14-10-2018 IPR023380 DsbB-like superfamily VEJY3_10780 58559dc4f34f940796ed890ce0a4be4e 161 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 153 19.927 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB VEJY3_10780 58559dc4f34f940796ed890ce0a4be4e 161 Pfam PF02600 Disulfide bond formation protein DsbB 2 145 3.2E-42 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VEJY3_10780 58559dc4f34f940796ed890ce0a4be4e 161 SUPERFAMILY SSF158442 2 146 1.16E-43 T 14-10-2018 IPR023380 DsbB-like superfamily VEJY3_16966 8473f736579d7a3183db761884054ded 539 SUPERFAMILY SSF56801 12 538 2.49E-138 T 14-10-2018 VEJY3_16966 8473f736579d7a3183db761884054ded 539 Pfam PF00501 AMP-binding enzyme 24 443 3.4E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_16966 8473f736579d7a3183db761884054ded 539 Gene3D G3DSA:3.40.50.12780 6 438 2.6E-110 T 14-10-2018 VEJY3_16966 8473f736579d7a3183db761884054ded 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 2.2E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_16966 8473f736579d7a3183db761884054ded 539 Gene3D G3DSA:3.30.300.310 439 539 8.8E-32 T 14-10-2018 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 Pfam PF12833 Helix-turn-helix domain 191 269 2.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 SMART SM00342 184 268 4.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 Pfam PF02311 AraC-like ligand binding domain 19 131 8.0E-9 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 SUPERFAMILY SSF46689 222 270 8.51E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 Gene3D G3DSA:1.10.10.60 166 272 1.2E-23 T 14-10-2018 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 SUPERFAMILY SSF51215 20 156 1.11E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_02930 3f563e0bdfabd0f483c5929dc024196f 274 Gene3D G3DSA:2.60.120.10 4 85 4.9E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_11470 6981e1056f2c5ebb0dbb7195b45160f3 258 Pfam PF13614 AAA domain 4 174 2.3E-51 T 14-10-2018 IPR025669 AAA domain VEJY3_11470 6981e1056f2c5ebb0dbb7195b45160f3 258 Gene3D G3DSA:3.40.50.300 1 254 4.0E-67 T 14-10-2018 VEJY3_11470 6981e1056f2c5ebb0dbb7195b45160f3 258 SUPERFAMILY SSF52540 1 252 1.38E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 Gene3D G3DSA:3.40.50.10490 91 266 1.0E-12 T 14-10-2018 VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 75 3.7E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 SUPERFAMILY SSF46689 6 80 1.79E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 SUPERFAMILY SSF53697 100 248 9.39E-8 T 14-10-2018 VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 Pfam PF01380 SIS domain 119 242 1.7E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_19296 72b3c9aa2a879dfce1d841cfd025af92 271 Gene3D G3DSA:1.10.10.10 1 79 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14125 e3979a021d08657f1f0640023ac5bde6 298 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 6.3E-101 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEJY3_14125 e3979a021d08657f1f0640023ac5bde6 298 Gene3D G3DSA:3.20.20.220 1 298 3.8E-112 T 14-10-2018 VEJY3_14125 e3979a021d08657f1f0640023ac5bde6 298 SUPERFAMILY SSF51730 22 294 1.84E-95 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VEJY3_18896 c03f60ddfb83ab34514029e6fb3df63d 202 PIRSF PIRSF006091 5 202 7.0E-53 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEJY3_18896 c03f60ddfb83ab34514029e6fb3df63d 202 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 9 195 22.87 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEJY3_18896 c03f60ddfb83ab34514029e6fb3df63d 202 SMART SM00900 103 193 1.2E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_18896 c03f60ddfb83ab34514029e6fb3df63d 202 Pfam PF04205 FMN-binding domain 103 190 8.8E-19 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_06065 43dea89f137299e7f622b02178637d94 230 Pfam PF02698 DUF218 domain 51 188 2.9E-21 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 SUPERFAMILY SSF52343 119 253 6.29E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Gene3D G3DSA:3.10.20.30 266 351 1.0E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 3.5E-16 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Gene3D G3DSA:2.40.30.10 5 109 3.0E-24 T 14-10-2018 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 SUPERFAMILY SSF63380 4 110 4.33E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 1.7E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 2.0E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 SUPERFAMILY SSF54292 242 350 2.36E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_05780 0a6e1b5d91579adf002234728a479acd 351 Gene3D G3DSA:3.40.50.80 115 257 1.6E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_05725 ebfccb9648cc8293ae5a791abfcce8c1 77 Pfam PF06667 Phage shock protein B 4 74 1.3E-31 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF04545 Sigma-70, region 4 557 610 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 622 45.516 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Gene3D G3DSA:1.10.601.10 113 458 2.7E-139 T 14-10-2018 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 1.0E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF04546 Sigma-70, non-essential region 139 358 8.6E-68 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 SUPERFAMILY SSF88659 462 535 2.25E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 SUPERFAMILY SSF88659 519 621 2.62E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Gene3D G3DSA:1.10.10.10 539 623 1.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 SUPERFAMILY SSF88946 115 456 5.63E-96 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 413 426 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 582 608 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Gene3D G3DSA:1.10.220.120 1 64 1.1E-29 T 14-10-2018 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Gene3D G3DSA:1.10.10.10 462 538 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF04542 Sigma-70 region 2 389 458 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 PRINTS PR00046 Major sigma-70 factor signature 437 445 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 PRINTS PR00046 Major sigma-70 factor signature 597 608 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 PRINTS PR00046 Major sigma-70 factor signature 561 573 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 PRINTS PR00046 Major sigma-70 factor signature 413 426 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 PRINTS PR00046 Major sigma-70 factor signature 582 597 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF04539 Sigma-70 region 3 468 543 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEJY3_01815 7a407a97229119d2d083912af48e3e03 623 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 Gene3D G3DSA:1.10.10.10 11 152 4.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 8.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 8.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 8.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 SUPERFAMILY SSF46785 13 151 4.03E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 Pfam PF01047 MarR family 46 103 6.2E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_24236 919d831447c892cdd91011549f9e63c4 152 SMART SM00347 39 142 1.5E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17696 46ede1c25b925e5d46c3f8ec43914fdb 137 Gene3D G3DSA:3.30.160.20 1 137 2.2E-38 T 14-10-2018 VEJY3_17696 46ede1c25b925e5d46c3f8ec43914fdb 137 Pfam PF00472 RF-1 domain 7 132 3.4E-23 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_17696 46ede1c25b925e5d46c3f8ec43914fdb 137 SUPERFAMILY SSF75620 8 112 2.9E-11 T 14-10-2018 VEJY3_17696 46ede1c25b925e5d46c3f8ec43914fdb 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 Gene3D G3DSA:3.40.190.10 98 297 7.3E-55 T 14-10-2018 VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 Gene3D G3DSA:3.40.190.10 168 269 7.3E-55 T 14-10-2018 VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 Pfam PF03466 LysR substrate binding domain 96 299 4.5E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 SUPERFAMILY SSF53850 95 300 6.29E-35 T 14-10-2018 VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 Gene3D G3DSA:1.10.10.10 2 90 7.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 SUPERFAMILY SSF46785 4 117 3.17E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02660 fe4c5bbf3bad1c7c2520664b075fe4d2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 8.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 14-10-2018 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 2.4E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 SUPERFAMILY SSF50022 30 189 2.16E-44 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_01985 b24d19912cc7bff947c3d24c64353aa5 196 Gene3D G3DSA:2.102.10.10 43 190 2.7E-48 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 PIRSF PIRSF005751 1 346 5.7E-136 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 Gene3D G3DSA:3.40.50.620 155 345 9.9E-21 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 336 2.0E-84 T 14-10-2018 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 Pfam PF08218 Citrate lyase ligase C-terminal domain 148 333 2.7E-79 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 SUPERFAMILY SSF55729 19 115 5.22E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 SMART SM00764 147 333 7.9E-120 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 Gene3D G3DSA:3.40.630.30 8 154 4.0E-7 T 14-10-2018 VEJY3_17151 09ae4790488125ccddb18b5f6b8f1e60 350 SUPERFAMILY SSF52374 153 342 7.51E-25 T 14-10-2018 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 Gene3D G3DSA:3.40.190.10 103 288 4.6E-58 T 14-10-2018 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 Gene3D G3DSA:3.40.190.10 163 261 4.6E-58 T 14-10-2018 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 Pfam PF03466 LysR substrate binding domain 91 291 4.1E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_03190 0fc607f904b54ebc23f62fa53881d875 306 SUPERFAMILY SSF53850 92 296 2.71E-38 T 14-10-2018 VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 Pfam PF12019 Type II transport protein GspH 41 148 8.2E-8 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 Gene3D G3DSA:3.30.700.10 5 163 4.2E-10 T 14-10-2018 VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 PIRSF PIRSF024622 1 169 1.5E-57 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 SUPERFAMILY SSF54523 5 97 8.63E-14 T 14-10-2018 VEJY3_03015 2378dc2ea1499d422ea8c61e50dfdae0 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 5.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 SUPERFAMILY SSF53850 1 253 5.08E-70 T 14-10-2018 VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 SMART SM00079 26 251 1.1E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 4.2E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 Gene3D G3DSA:3.40.190.10 112 209 5.9E-73 T 14-10-2018 VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 SMART SM00062 26 252 1.9E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_04625 bef21ad64442d13a00333ed5043fd5bd 256 Gene3D G3DSA:3.40.190.10 28 248 5.9E-73 T 14-10-2018 VEJY3_03515 d876bc76f8caa2a6e17d7356bf20c079 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.3E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like VEJY3_03515 d876bc76f8caa2a6e17d7356bf20c079 143 PIRSF PIRSF028687 1 143 2.1E-58 T 14-10-2018 IPR007293 Flagellar protein FlgP VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 Pfam PF00924 Mechanosensitive ion channel 77 274 9.2E-58 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 SUPERFAMILY SSF82689 187 284 7.59E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 Gene3D G3DSA:2.30.30.60 135 184 4.2E-23 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 SUPERFAMILY SSF82861 33 118 3.01E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 Pfam PF05552 Conserved TM helix 21 69 2.7E-12 T 14-10-2018 IPR008910 Conserved TM helix VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 SUPERFAMILY SSF50182 120 185 5.56E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_13375 81932331f5c8d4c3bbf4cb972e2f3f51 288 Gene3D G3DSA:3.30.70.100 185 279 9.2E-28 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:2.40.50.100 1151 1214 5.8E-64 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 5.8E-64 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.1E-28 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.5E-76 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.132.30 641 790 3.3E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.150.390 1315 1376 9.3E-29 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:2.40.50.100 948 1021 2.5E-22 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.274.100 565 640 6.8E-14 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Gene3D G3DSA:1.10.274.100 490 564 3.7E-24 T 14-10-2018 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 9.7E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_14760 422d37cc6a131e10dfe65984a14642c2 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.971 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 SUPERFAMILY SSF81665 8 897 3.53E-122 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Pfam PF00690 Cation transporter/ATPase, N-terminus 8 74 1.1E-15 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Pfam PF00702 haloacid dehalogenase-like hydrolase 325 650 1.1E-20 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 3.5E-22 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 3.5E-22 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 3.5E-22 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 874 895 3.5E-22 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 511 3.5E-22 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 330 336 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 SUPERFAMILY SSF81660 335 539 3.49E-55 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 SUPERFAMILY SSF81653 118 227 6.67E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Gene3D G3DSA:3.40.1110.10 338 542 5.6E-294 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Pfam PF00689 Cation transporting ATPase, C-terminus 722 893 8.0E-43 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Gene3D G3DSA:1.20.1110.10 58 893 5.6E-294 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Gene3D G3DSA:2.70.150.10 22 230 5.6E-294 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 SUPERFAMILY SSF56784 326 742 1.37E-59 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 SMART SM00831 7 80 1.5E-25 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Pfam PF00122 E1-E2 ATPase 115 308 6.7E-54 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 Gene3D G3DSA:3.40.50.1000 325 681 5.6E-294 T 14-10-2018 IPR023214 HAD superfamily VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 328 342 8.2E-38 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 546 8.2E-38 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 8.2E-38 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 8.2E-38 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 8.2E-38 T 14-10-2018 VEJY3_20416 5dd603d54d3cee8312ff9cf4fb4c497b 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 8.2E-38 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Pfam PF03484 tRNA synthetase B5 domain 406 476 4.5E-16 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:2.40.50.140 39 154 2.2E-70 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SUPERFAMILY SSF55681 472 694 2.24E-52 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:3.30.70.380 707 800 1.7E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SUPERFAMILY SSF54991 702 799 5.49E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:3.30.56.10 7 179 2.2E-70 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SMART SM00873 212 385 5.9E-99 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 793 46.778 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SUPERFAMILY SSF50249 38 196 1.57E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SMART SM00874 403 476 8.5E-28 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Pfam PF03483 B3/4 domain 212 385 5.4E-71 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Pfam PF01588 Putative tRNA binding domain 45 145 5.1E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SMART SM00896 706 799 6.3E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SUPERFAMILY SSF56037 196 394 5.23E-77 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:3.30.56.10 401 480 3.0E-24 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 SUPERFAMILY SSF46955 403 480 9.16E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 799 1.9E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:3.30.930.10 491 696 9.8E-63 T 14-10-2018 VEJY3_06210 281506a98991e5ecb179cebe0fca0222 800 Gene3D G3DSA:3.50.40.10 197 395 2.1E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VEJY3_07565 0d196075dac04874682c2ef53b23a5fd 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 6.0E-23 T 14-10-2018 IPR007040 Ribosome modulation factor VEJY3_07565 0d196075dac04874682c2ef53b23a5fd 57 Gene3D G3DSA:1.10.10.620 1 57 3.8E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily VEJY3_07565 0d196075dac04874682c2ef53b23a5fd 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.607 T 14-10-2018 IPR007040 Ribosome modulation factor VEJY3_07565 0d196075dac04874682c2ef53b23a5fd 57 Pfam PF04957 Ribosome modulation factor 1 54 2.2E-28 T 14-10-2018 IPR007040 Ribosome modulation factor VEJY3_04525 4f17792b91b31c337aaf3b3233b52432 235 SUPERFAMILY SSF52540 4 225 5.6E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04525 4f17792b91b31c337aaf3b3233b52432 235 Pfam PF00005 ABC transporter 24 172 4.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_04525 4f17792b91b31c337aaf3b3233b52432 235 Gene3D G3DSA:3.40.50.300 1 234 1.2E-66 T 14-10-2018 VEJY3_04525 4f17792b91b31c337aaf3b3233b52432 235 SMART SM00382 33 221 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04525 4f17792b91b31c337aaf3b3233b52432 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 Pfam PF00303 Thymidylate synthase 2 283 2.1E-75 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.544 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 SUPERFAMILY SSF55831 2 283 5.23E-93 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 2.8E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 2.8E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 2.8E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 2.8E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 Gene3D G3DSA:3.30.572.10 1 283 3.2E-81 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_02370 58a4723f73c6573d655cc789ec54f267 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Gene3D G3DSA:3.40.350.10 147 292 2.5E-25 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 SUPERFAMILY SSF55920 303 559 5.89E-55 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Gene3D G3DSA:3.40.350.10 1 146 1.3E-36 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 7.2E-23 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 133 2.1E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 SUPERFAMILY SSF53092 6 130 3.14E-20 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Gene3D G3DSA:3.90.230.10 300 593 1.4E-94 T 14-10-2018 VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Pfam PF00557 Metallopeptidase family M24 310 524 7.3E-42 T 14-10-2018 IPR000994 Peptidase M24 VEJY3_15220 aaad22db4e53d00a7b122548c981104a 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 9.8E-36 T 14-10-2018 VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 Gene3D G3DSA:2.30.30.450 212 350 5.7E-56 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 Gene3D G3DSA:3.30.420.10 1 199 3.0E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.9E-104 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 Gene3D G3DSA:1.20.1280.70 357 418 3.2E-29 T 14-10-2018 VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 SUPERFAMILY SSF53098 7 471 6.35E-141 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 Pfam PF00929 Exonuclease 11 190 1.1E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 PIRSF PIRSF000977 1 473 9.1E-200 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VEJY3_06275 5ef19e1c7e59cb814be00cf497d796e7 473 SMART SM00479 8 201 0.0023 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 SUPERFAMILY SSF53850 94 295 2.71E-22 T 14-10-2018 VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 SUPERFAMILY SSF46785 4 112 8.16E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 3.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.777 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 Pfam PF03466 LysR substrate binding domain 95 277 2.3E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 Gene3D G3DSA:1.10.10.10 2 85 7.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13365 e84daaf4abf0b9f03233912c150eed11 298 Gene3D G3DSA:3.40.190.290 89 295 9.2E-65 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 SUPERFAMILY SSF46548 2 155 6.28E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 3.5E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 Gene3D G3DSA:3.40.50.720 144 251 2.2E-16 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.1E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 SUPERFAMILY SSF51971 143 407 1.41E-66 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 Gene3D G3DSA:1.10.1060.10 10 143 6.2E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 Gene3D G3DSA:3.50.50.60 252 406 1.9E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_02185 2f904fd615416fac78780be070b79a74 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.0E-23 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.0E-23 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.0E-23 T 14-10-2018 VEJY3_02185 2f904fd615416fac78780be070b79a74 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.0E-23 T 14-10-2018 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 PIRSF PIRSF002161 1 179 6.3E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 Gene3D G3DSA:3.30.1440.10 1 179 6.4E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.054 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01340 995258917665b7f2c876eb4d7e2c5d48 179 SUPERFAMILY SSF55282 4 179 1.44E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 SUPERFAMILY SSF56796 4 380 3.01E-123 T 14-10-2018 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 Gene3D G3DSA:1.20.1090.10 184 381 2.3E-72 T 14-10-2018 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 Gene3D G3DSA:3.40.50.1970 1 183 1.5E-51 T 14-10-2018 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 374 2.2E-119 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_21141 6977e60498e245d456bf7ae4df6a6806 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_16571 1e80e9ed854189f870ffe123207fbe31 136 SUPERFAMILY SSF55729 7 121 1.23E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_16571 1e80e9ed854189f870ffe123207fbe31 136 Pfam PF13673 Acetyltransferase (GNAT) domain 32 133 2.8E-14 T 14-10-2018 IPR000182 GNAT domain VEJY3_16571 1e80e9ed854189f870ffe123207fbe31 136 Gene3D G3DSA:3.40.630.30 1 134 1.4E-32 T 14-10-2018 VEJY3_00510 ce5bd79a8ab68f79f9535fc6ab9ee8c2 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.571 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VEJY3_00510 ce5bd79a8ab68f79f9535fc6ab9ee8c2 180 Pfam PF04220 Der GTPase activator (YihI) 22 170 6.1E-45 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 SUPERFAMILY SSF52440 3 114 4.8E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Gene3D G3DSA:3.40.50.20 18 325 9.5E-80 T 14-10-2018 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 SUPERFAMILY SSF56059 115 326 3.16E-44 T 14-10-2018 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 2.6E-53 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Gene3D G3DSA:3.30.1490.20 131 198 9.5E-80 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Gene3D G3DSA:3.30.470.20 104 319 9.5E-80 T 14-10-2018 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.828 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 1.2E-99 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 PIRSF PIRSF039102 1 329 7.4E-77 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_19846 c677d0f5e80cabbf146ee5e83695b117 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 1.1E-19 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 484 48.422 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 283 3.8E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 SUPERFAMILY SSF53850 44 283 1.79E-33 T 14-10-2018 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Gene3D G3DSA:3.40.190.10 37 279 5.9E-73 T 14-10-2018 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 SUPERFAMILY SSF53955 261 466 7.47E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 325 353 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 SMART SM00062 43 284 2.2E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Gene3D G3DSA:1.10.530.10 303 482 1.8E-34 T 14-10-2018 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Gene3D G3DSA:3.40.190.10 128 240 5.9E-73 T 14-10-2018 VEJY3_03045 d31ee8fd27f6a2429058a0aee3aff4da 547 Pfam PF01464 Transglycosylase SLT domain 314 417 7.7E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VEJY3_19571 eb810197406a7e773c2a25c06ea455f4 282 Gene3D G3DSA:1.20.1080.10 2 251 1.2E-61 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_19571 eb810197406a7e773c2a25c06ea455f4 282 Pfam PF01226 Formate/nitrite transporter 9 258 1.3E-57 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEJY3_01450 37b6498d7135841db011b66e4d3fa6a2 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 248 6.6E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEJY3_01450 37b6498d7135841db011b66e4d3fa6a2 291 Gene3D G3DSA:3.40.1010.10 36 152 1.3E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEJY3_01450 37b6498d7135841db011b66e4d3fa6a2 291 Gene3D G3DSA:3.30.950.10 153 290 2.1E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEJY3_01450 37b6498d7135841db011b66e4d3fa6a2 291 SUPERFAMILY SSF53790 33 279 5.1E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEJY3_01450 37b6498d7135841db011b66e4d3fa6a2 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 2.4E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 SUPERFAMILY SSF51905 201 516 5.89E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 SUPERFAMILY SSF52833 104 196 7.96E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 SUPERFAMILY SSF52833 1 101 9.62E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 Gene3D G3DSA:3.50.50.60 213 510 2.9E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 Pfam PF13192 Thioredoxin domain 120 194 2.2E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 4.0E-35 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 4.0E-35 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 4.0E-35 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 4.0E-35 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 4.0E-35 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PIRSF PIRSF000238 1 522 1.7E-253 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 Gene3D G3DSA:3.50.50.60 328 451 2.9E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 Gene3D G3DSA:3.40.30.80 1 200 1.5E-62 T 14-10-2018 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEJY3_24246 4a12b288af27e44646b61c4b6f3c0e94 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VEJY3_02530 4a1e4fe9723cbe58d6a244f05941183d 242 Gene3D G3DSA:3.60.140.10 1 240 3.5E-88 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VEJY3_02530 4a1e4fe9723cbe58d6a244f05941183d 242 SUPERFAMILY SSF64438 3 241 1.65E-82 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VEJY3_02530 4a1e4fe9723cbe58d6a244f05941183d 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 1.5E-72 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Gene3D G3DSA:3.40.50.261 240 388 1.1E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Pfam PF08442 ATP-grasp domain 2 203 4.3E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Gene3D G3DSA:3.30.1490.20 21 104 1.2E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.19 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 SUPERFAMILY SSF56059 1 238 3.54E-79 T 14-10-2018 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Gene3D G3DSA:3.30.470.20 1 234 1.2E-91 T 14-10-2018 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 PIRSF PIRSF001554 1 388 5.2E-154 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 Pfam PF00549 CoA-ligase 262 382 5.5E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 SUPERFAMILY SSF52210 239 385 2.35E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_03865 99bb8580052161f65af7cb54ba38c9e2 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEJY3_19186 c3642000ebe8d15f1c6cef23ecd95f12 301 SUPERFAMILY SSF103481 193 290 2.62E-13 T 14-10-2018 VEJY3_19186 c3642000ebe8d15f1c6cef23ecd95f12 301 SUPERFAMILY SSF103481 47 145 1.96E-16 T 14-10-2018 VEJY3_19186 c3642000ebe8d15f1c6cef23ecd95f12 301 Pfam PF00892 EamA-like transporter family 158 286 3.6E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_19186 c3642000ebe8d15f1c6cef23ecd95f12 301 Pfam PF00892 EamA-like transporter family 11 142 6.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_18236 7b239deb3ba1f84601826e8f67dca684 168 SUPERFAMILY SSF55729 14 168 1.26E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_18236 7b239deb3ba1f84601826e8f67dca684 168 Pfam PF13673 Acetyltransferase (GNAT) domain 46 147 2.0E-10 T 14-10-2018 IPR000182 GNAT domain VEJY3_18236 7b239deb3ba1f84601826e8f67dca684 168 Gene3D G3DSA:3.40.630.30 2 168 6.4E-44 T 14-10-2018 VEJY3_10155 f42936ba5cfd2bc949312dd93e5081bf 354 Gene3D G3DSA:3.60.15.10 56 351 5.4E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_10155 f42936ba5cfd2bc949312dd93e5081bf 354 Pfam PF12706 Beta-lactamase superfamily domain 95 290 7.6E-44 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_10155 f42936ba5cfd2bc949312dd93e5081bf 354 SUPERFAMILY SSF56281 79 307 1.44E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 SUPERFAMILY SSF50129 329 379 2.21E-11 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 SUPERFAMILY SSF50129 11 196 6.63E-73 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 SUPERFAMILY SSF51735 171 345 1.39E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 Gene3D G3DSA:3.40.50.720 185 323 4.8E-154 T 14-10-2018 VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 Pfam PF00107 Zinc-binding dehydrogenase 208 338 1.5E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 1.2E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 Gene3D G3DSA:3.90.180.10 17 375 4.8E-154 T 14-10-2018 VEJY3_16016 5b0897a56aea53ce7f0cd25ed364c65a 382 SMART SM00829 23 378 7.7E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_19831 a710f13b1c45a96f3aa7294858bddbd7 104 Pfam PF13518 Helix-turn-helix domain 7 59 1.9E-10 T 14-10-2018 VEJY3_19831 a710f13b1c45a96f3aa7294858bddbd7 104 SUPERFAMILY SSF46689 4 103 8.24E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Gene3D G3DSA:2.40.50.920 27 103 3.5E-29 T 14-10-2018 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Gene3D G3DSA:1.20.58.760 401 605 3.6E-73 T 14-10-2018 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.3E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 SMART SM00382 188 327 5.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 SUPERFAMILY SSF140990 406 600 3.27E-76 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Gene3D G3DSA:1.10.8.60 327 400 2.1E-27 T 14-10-2018 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Pfam PF01434 Peptidase family M41 386 595 2.1E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Gene3D G3DSA:3.40.50.300 140 326 3.0E-70 T 14-10-2018 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 SUPERFAMILY SSF52540 147 395 9.77E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VEJY3_12725 f4b026341ead917d1997218efdba1caf 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 634 37.375 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 235 267 3.1E-7 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 Pfam PF00970 Oxidoreductase FAD-binding domain 19 99 3.3E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 PRINTS PR00406 Cytochrome B5 reductase signature 112 131 4.5E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 PRINTS PR00406 Cytochrome B5 reductase signature 203 211 4.5E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 PRINTS PR00406 Cytochrome B5 reductase signature 88 102 4.5E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 PRINTS PR00406 Cytochrome B5 reductase signature 149 160 4.5E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 PIRSF PIRSF006816 5 271 1.6E-53 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 Pfam PF00175 Oxidoreductase NAD-binding domain 114 217 4.6E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 SUPERFAMILY SSF63380 14 101 2.87E-14 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 SUPERFAMILY SSF52343 96 267 8.51E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 Gene3D G3DSA:2.40.30.10 8 99 3.7E-10 T 14-10-2018 VEJY3_20401 b40bfcd1ee86490e4430a4161ffcdec5 273 Gene3D G3DSA:3.40.50.80 107 234 1.6E-17 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 Pfam PF00563 EAL domain 148 374 9.1E-69 T 14-10-2018 IPR001633 EAL domain VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 Gene3D G3DSA:3.20.20.450 138 382 7.2E-77 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 Pfam PF00072 Response regulator receiver domain 8 114 5.5E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 SMART SM00052 137 379 5.8E-66 T 14-10-2018 IPR001633 EAL domain VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 SMART SM00448 5 121 3.8E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 Gene3D G3DSA:3.40.50.2300 2 134 6.1E-20 T 14-10-2018 VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 SUPERFAMILY SSF52172 6 127 1.57E-18 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19136 46e00a535d2a2509f6aeb73676aec310 384 SUPERFAMILY SSF141868 144 381 7.45E-74 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_01890 ce865c0146975c14a2977ab32e9d6c42 226 SUPERFAMILY SSF109755 29 216 1.92E-15 T 14-10-2018 VEJY3_01890 ce865c0146975c14a2977ab32e9d6c42 226 Gene3D G3DSA:1.20.58.220 1 225 4.3E-65 T 14-10-2018 IPR038078 PhoU-like domain superfamily VEJY3_01890 ce865c0146975c14a2977ab32e9d6c42 226 Pfam PF01865 Protein of unknown function DUF47 7 223 7.4E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator VEJY3_14910 bbbfbbd0b5b031d3108c18f00241ebd5 280 SUPERFAMILY SSF144091 96 271 5.49E-40 T 14-10-2018 VEJY3_14910 bbbfbbd0b5b031d3108c18f00241ebd5 280 Pfam PF01694 Rhomboid family 134 271 3.8E-30 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VEJY3_14910 bbbfbbd0b5b031d3108c18f00241ebd5 280 Gene3D G3DSA:3.30.70.2350 1 70 1.4E-25 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VEJY3_14910 bbbfbbd0b5b031d3108c18f00241ebd5 280 Gene3D G3DSA:1.20.1540.10 89 279 1.1E-52 T 14-10-2018 IPR035952 Rhomboid-like superfamily VEJY3_14910 bbbfbbd0b5b031d3108c18f00241ebd5 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 1.2E-33 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VEJY3_23751 78ac883c83a32a252acd55de35a1127e 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.5 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 VEJY3_23751 78ac883c83a32a252acd55de35a1127e 289 SUPERFAMILY SSF53613 2 275 3.27E-69 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_23751 78ac883c83a32a252acd55de35a1127e 289 Pfam PF08543 Phosphomethylpyrimidine kinase 76 261 8.2E-21 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEJY3_23751 78ac883c83a32a252acd55de35a1127e 289 Gene3D G3DSA:3.40.1190.20 1 288 9.7E-87 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SMART SM00304 377 430 2.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SMART SM00387 573 684 1.2E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:3.30.450.20 258 358 1.1E-6 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SMART SM00388 459 527 6.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:3.30.565.10 529 688 2.6E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SUPERFAMILY SSF55785 860 927 2.97E-8 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SMART SM00091 873 938 5.3E-5 T 14-10-2018 IPR000014 PAS domain VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:1.10.8.500 376 430 3.6E-15 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SUPERFAMILY SSF52172 718 843 8.82E-41 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SUPERFAMILY SSF158472 378 429 4.18E-10 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Pfam PF00672 HAMP domain 379 427 7.0E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SUPERFAMILY SSF47384 445 527 1.47E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:3.40.50.2300 712 854 6.2E-40 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:1.10.287.130 441 528 1.7E-20 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Pfam PF13188 PAS domain 879 919 2.8E-4 T 14-10-2018 IPR000014 PAS domain VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Gene3D G3DSA:3.30.450.20 859 953 1.3E-7 T 14-10-2018 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SUPERFAMILY SSF55874 516 685 7.2E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 SMART SM00448 722 835 1.1E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_12810 194de04f3dc9f16ebd04a3b5ae4c80e4 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 Gene3D G3DSA:3.40.640.10 35 295 6.8E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 Pfam PF00266 Aminotransferase class-V 24 392 1.5E-148 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 PIRSF PIRSF005572 21 403 1.6E-54 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 SUPERFAMILY SSF53383 2 400 4.17E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 Gene3D G3DSA:3.90.1150.10 7 395 6.8E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 3.6E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_12300 662967aa737cc6836f5c4ac7f12b171c 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 4.8E-156 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 SUPERFAMILY SSF50129 5 145 7.93E-41 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 Gene3D G3DSA:3.40.50.720 129 310 5.9E-132 T 14-10-2018 VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 1.0E-39 T 14-10-2018 VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 SUPERFAMILY SSF51735 126 305 5.3E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 Gene3D G3DSA:3.90.180.10 17 338 5.9E-132 T 14-10-2018 VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 Pfam PF00107 Zinc-binding dehydrogenase 160 299 1.4E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_23171 0d2ab8f1ab84d3d822b96dc3c5c0ad0b 344 SMART SM00829 20 338 3.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 SMART SM00862 147 221 3.6E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 Gene3D G3DSA:1.10.10.10 131 224 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 9.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 Gene3D G3DSA:3.40.50.2300 1 130 3.3E-34 T 14-10-2018 VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 SUPERFAMILY SSF52172 1 171 6.83E-39 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 SMART SM00448 2 113 2.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10365 e9ff07e5f6a4d0649a8f33b4d9a54b93 225 Pfam PF00072 Response regulator receiver domain 4 112 8.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_17856 15e11ef103a52418f386a554c2343d35 205 Pfam PF12682 Flavodoxin 53 155 2.3E-11 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_17856 15e11ef103a52418f386a554c2343d35 205 SUPERFAMILY SSF52218 51 186 3.1E-15 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_17856 15e11ef103a52418f386a554c2343d35 205 Gene3D G3DSA:3.40.50.360 36 193 1.2E-26 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 SMART SM00052 345 593 1.2E-74 T 14-10-2018 IPR001633 EAL domain VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 Pfam PF00563 EAL domain 351 588 5.7E-61 T 14-10-2018 IPR001633 EAL domain VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 SUPERFAMILY SSF55781 22 155 3.01E-5 T 14-10-2018 VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 325 6.8E-26 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 SUPERFAMILY SSF55073 182 332 3.45E-30 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 Gene3D G3DSA:3.30.70.270 171 343 8.7E-35 T 14-10-2018 VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 SMART SM00267 166 331 4.1E-21 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 1.4E-25 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 Gene3D G3DSA:3.20.20.450 344 606 4.7E-72 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_22026 55202cc5717c5762c979757180c0cb83 606 SUPERFAMILY SSF141868 358 601 1.12E-69 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 Gene3D G3DSA:1.10.287.950 335 666 4.7E-64 T 14-10-2018 VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 SMART SM00304 335 388 7.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 SUPERFAMILY SSF58104 361 665 1.57E-64 T 14-10-2018 VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 1.5E-13 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 Pfam PF00672 HAMP domain 337 379 1.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 SMART SM00283 403 664 1.9E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_21856 fc0c5e91dd5e77529e218b9fe3408a40 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 622 1.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_08440 5b00816ff14b3078aafe277ab0676081 532 Pfam PF00171 Aldehyde dehydrogenase family 100 488 1.5E-29 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_08440 5b00816ff14b3078aafe277ab0676081 532 SUPERFAMILY SSF53720 100 521 7.72E-62 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_08440 5b00816ff14b3078aafe277ab0676081 532 Gene3D G3DSA:3.40.605.10 101 307 5.2E-117 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08440 5b00816ff14b3078aafe277ab0676081 532 Gene3D G3DSA:3.40.309.10 308 487 5.2E-117 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_22476 8230ab3c3505cca52f9e8648fb991377 309 Pfam PF00246 Zinc carboxypeptidase 76 146 1.1E-6 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_22476 8230ab3c3505cca52f9e8648fb991377 309 SUPERFAMILY SSF53187 36 289 2.02E-39 T 14-10-2018 VEJY3_22476 8230ab3c3505cca52f9e8648fb991377 309 Gene3D G3DSA:3.40.630.10 4 306 4.4E-116 T 14-10-2018 VEJY3_12285 8448036a973d3e752729687863ee13dc 263 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 263 7.1E-97 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VEJY3_12285 8448036a973d3e752729687863ee13dc 263 SUPERFAMILY SSF111364 30 263 1.96E-82 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VEJY3_12285 8448036a973d3e752729687863ee13dc 263 Gene3D G3DSA:2.40.230.20 23 263 7.1E-76 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 502 8.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 8.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 8.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 8.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Gene3D G3DSA:1.20.120.160 2 142 4.1E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Pfam PF01627 Hpt domain 9 100 3.5E-16 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SMART SM00387 443 586 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SUPERFAMILY SSF47384 340 399 5.89E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Gene3D G3DSA:3.30.565.10 399 585 1.2E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Gene3D G3DSA:1.10.287.560 339 398 2.1E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Gene3D G3DSA:2.40.50.180 609 674 1.5E-35 T 14-10-2018 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SUPERFAMILY SSF55874 401 584 6.02E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SMART SM00073 6 103 3.1E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Gene3D G3DSA:2.30.30.40 586 715 1.5E-35 T 14-10-2018 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 446 585 3.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Pfam PF01584 CheW-like domain 592 721 4.9E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SMART SM01231 338 398 1.7E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SUPERFAMILY SSF47226 6 129 4.84E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SUPERFAMILY SSF50341 585 719 6.02E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 339 398 2.9E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VEJY3_11480 8e32f7fa99fab467c4a840a79ff7d2be 728 SMART SM00260 578 719 7.2E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_21536 341e6163019afd9d0f9b4488eae8dbe4 417 SUPERFAMILY SSF51905 32 402 1.3E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21536 341e6163019afd9d0f9b4488eae8dbe4 417 Pfam PF01266 FAD dependent oxidoreductase 34 381 6.5E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_21536 341e6163019afd9d0f9b4488eae8dbe4 417 Gene3D G3DSA:3.30.9.10 115 347 5.2E-108 T 14-10-2018 VEJY3_21536 341e6163019afd9d0f9b4488eae8dbe4 417 Gene3D G3DSA:3.50.50.60 34 391 5.2E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 Gene3D G3DSA:3.40.190.10 92 287 8.5E-60 T 14-10-2018 VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 Pfam PF03466 LysR substrate binding domain 90 290 8.4E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 SUPERFAMILY SSF46785 4 110 4.02E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 Gene3D G3DSA:3.40.190.10 164 260 8.5E-60 T 14-10-2018 VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 SUPERFAMILY SSF53850 91 291 1.85E-38 T 14-10-2018 VEJY3_16986 674882d64a87815114d64c340f7cc91b 293 Gene3D G3DSA:1.10.10.10 4 89 3.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 Gene3D G3DSA:1.10.287.480 178 224 1.6E-22 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 Gene3D G3DSA:3.55.30.10 1 175 1.3E-62 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 SUPERFAMILY SSF64397 4 231 9.81E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 Pfam PF01430 Hsp33 protein 6 272 1.0E-77 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.662 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 SUPERFAMILY SSF118352 223 281 2.49E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 PIRSF PIRSF005261 1 284 2.7E-69 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEJY3_00595 642b945f7a1ecb2d7893ab9d43336d5a 291 Gene3D G3DSA:3.90.1280.10 225 284 1.9E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VEJY3_01410 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01410 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01410 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01410 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01410 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 Pfam PF01259 SAICAR synthetase 22 293 1.6E-47 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 Gene3D G3DSA:3.30.470.20 130 292 3.3E-14 T 14-10-2018 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 SUPERFAMILY SSF56104 14 344 1.01E-67 T 14-10-2018 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 Gene3D G3DSA:3.30.200.20 12 129 1.7E-24 T 14-10-2018 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_06090 382cc27f9ebde19c4609c948983eb15a 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.523 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 Gene3D G3DSA:2.40.10.220 113 210 3.3E-6 T 14-10-2018 VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 Pfam PF07238 PilZ domain 113 205 1.0E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 Pfam PF12945 Flagellar protein YcgR 15 105 1.6E-12 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 SUPERFAMILY SSF141371 117 217 2.55E-16 T 14-10-2018 VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 Gene3D G3DSA:2.30.110.10 3 112 3.5E-13 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_17556 87c47282602d32be6cb57152e1e4796c 219 SUPERFAMILY SSF141371 3 115 9.42E-29 T 14-10-2018 VEJY3_18716 97e4cd85451a0a14f3203ed37f7fd957 229 Gene3D G3DSA:1.10.150.590 1 80 2.6E-12 T 14-10-2018 IPR038127 NafY, N-terminal domain superfamily VEJY3_18716 97e4cd85451a0a14f3203ed37f7fd957 229 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 109 200 4.3E-17 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VEJY3_18716 97e4cd85451a0a14f3203ed37f7fd957 229 SUPERFAMILY SSF53146 99 214 2.22E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_18716 97e4cd85451a0a14f3203ed37f7fd957 229 Pfam PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal 5 72 1.7E-15 T 14-10-2018 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal VEJY3_18716 97e4cd85451a0a14f3203ed37f7fd957 229 Gene3D G3DSA:3.30.420.130 95 215 4.4E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 SMART SM00448 3 114 6.3E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 Pfam PF00072 Response regulator receiver domain 5 114 5.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-36 T 14-10-2018 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 SUPERFAMILY SSF46894 133 234 5.67E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 Gene3D G3DSA:1.10.10.10 123 237 7.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 SMART SM00862 157 233 5.0E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.0E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_04135 0cdb2c4b9e8e1c067a24f2e15df06003 241 SUPERFAMILY SSF52172 2 127 1.71E-41 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 Gene3D G3DSA:3.60.21.10 22 360 1.4E-136 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 2.1E-19 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.5E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 SUPERFAMILY SSF56300 23 360 2.68E-87 T 14-10-2018 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 221 238 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 289 309 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 249 272 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 28 46 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 434 457 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 PRINTS PR01607 Apyrase family signature 536 555 2.8E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 SUPERFAMILY SSF55816 361 603 1.44E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_01445 afdbf9d5e21acfabf5180cb9bdc79341 653 Gene3D G3DSA:3.90.780.10 411 592 1.3E-48 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 SMART SM00382 39 233 3.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 Gene3D G3DSA:3.40.50.300 3 304 8.4E-80 T 14-10-2018 VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 4.3E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 SUPERFAMILY SSF52540 5 254 3.25E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_15786 2b39328ef2c5e76dc354b10abe434b95 310 Pfam PF00005 ABC transporter 30 184 9.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SMART SM00091 98 166 2.1E-6 T 14-10-2018 IPR000014 PAS domain VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Gene3D G3DSA:3.30.450.20 85 201 1.0E-9 T 14-10-2018 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Gene3D G3DSA:1.10.287.130 202 272 3.8E-20 T 14-10-2018 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.5E-31 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SUPERFAMILY SSF55785 86 196 4.19E-11 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SUPERFAMILY SSF55874 261 426 3.67E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Pfam PF00989 PAS fold 99 155 1.5E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 426 9.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SUPERFAMILY SSF47384 192 271 1.96E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SMART SM00387 317 429 3.5E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 SMART SM00388 205 272 2.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_02605 d1619c67610e29d3b95f4ea5084f7bf1 432 Gene3D G3DSA:3.30.565.10 280 429 9.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 SUPERFAMILY SSF52540 19 326 2.7E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 SMART SM00490 219 315 3.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 SMART SM00487 1 174 9.9E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Pfam PF04408 Helicase associated domain (HA2) 373 438 2.6E-6 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Gene3D G3DSA:1.20.120.1080 355 450 4.3E-7 T 14-10-2018 VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Gene3D G3DSA:3.40.50.300 1 163 1.2E-40 T 14-10-2018 VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Pfam PF00270 DEAD/DEAH box helicase 17 153 4.7E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Pfam PF00271 Helicase conserved C-terminal domain 198 314 2.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_06075 a7ec46a44c46aea100a9dc3aaaca56a8 784 Gene3D G3DSA:3.40.50.300 168 331 6.3E-46 T 14-10-2018 VEJY3_16886 c815f0eeb3d8253e811a72cdd3380433 527 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 36 513 3.2E-145 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 Gene3D G3DSA:3.40.50.720 1 221 4.6E-50 T 14-10-2018 VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 Pfam PF00106 short chain dehydrogenase 2 182 2.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_13545 b5dd8da6ba916477b20e90ddb8f5a5b4 221 SUPERFAMILY SSF51735 2 207 1.32E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 6.5E-161 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.884 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 Gene3D G3DSA:3.30.499.10 304 466 1.7E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 SUPERFAMILY SSF53732 1 465 2.09E-166 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_01680 fd4044d7d9bae53134909784f0ff4ecc 466 Gene3D G3DSA:3.30.499.20 4 286 4.2E-100 T 14-10-2018 VEJY3_09745 aa3cdaf881e0ec7ef0a50165b36ecb52 114 PIRSF PIRSF030771 1 105 1.1E-27 T 14-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 VEJY3_09745 aa3cdaf881e0ec7ef0a50165b36ecb52 114 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 103 3.5E-23 T 14-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 VEJY3_00325 73b95539dbadefd10f60d4740e50bca6 1174 Pfam PF07603 Protein of unknown function (DUF1566) 1010 1152 5.2E-10 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VEJY3_00325 73b95539dbadefd10f60d4740e50bca6 1174 SUPERFAMILY SSF49265 862 925 1.81E-5 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 VEJY3_00325 73b95539dbadefd10f60d4740e50bca6 1174 Gene3D G3DSA:2.60.40.10 859 948 3.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_17551 6bc4adadb1f972d4e6fb24648f14776e 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 2.4E-49 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VEJY3_17551 6bc4adadb1f972d4e6fb24648f14776e 345 PIRSF PIRSF029594 8 345 7.4E-137 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VEJY3_22401 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 14-10-2018 VEJY3_22401 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 14-10-2018 VEJY3_22401 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 14-10-2018 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 SMART SM00937 1 78 2.0E-24 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 Gene3D G3DSA:3.30.160.20 109 204 4.1E-97 T 14-10-2018 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 128 144 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 Pfam PF03462 PCRF domain 4 102 2.3E-42 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 SUPERFAMILY SSF75620 2 245 3.14E-114 T 14-10-2018 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 Gene3D G3DSA:3.30.70.1660 13 241 4.1E-97 T 14-10-2018 VEJY3_02315 e2fb9bb3196c19ea2bc34c499f8cfba9 248 Pfam PF00472 RF-1 domain 111 220 6.5E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 Gene3D G3DSA:2.40.50.100 316 328 3.7E-11 T 14-10-2018 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 SUPERFAMILY SSF50331 191 330 1.36E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 Gene3D G3DSA:3.40.50.300 1 176 1.4E-49 T 14-10-2018 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 Gene3D G3DSA:2.40.50.140 260 315 3.7E-11 T 14-10-2018 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 SUPERFAMILY SSF52540 1 197 4.91E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 ProSitePatterns PS00211 ABC transporters family signature. 89 103 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 Pfam PF00005 ABC transporter 2 116 3.2E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_22811 e9462ffc6fb04979f9c7fd02a6f98c2f 330 Gene3D G3DSA:2.40.50.940 177 243 2.0E-12 T 14-10-2018 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 SMART SM00344 4 111 1.6E-41 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.2E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 Pfam PF01037 Lrp/AsnC ligand binding domain 71 141 1.4E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 Gene3D G3DSA:1.10.10.10 2 55 2.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 Gene3D G3DSA:3.30.70.920 56 138 1.7E-31 T 14-10-2018 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 SUPERFAMILY SSF46785 3 64 2.92E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 5.7E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_00280 36c4fe0910a48240d5447169f767daab 150 SUPERFAMILY SSF54909 65 150 4.02E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Pfam PF13522 Glutamine amidotransferase domain 53 174 1.0E-21 T 14-10-2018 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 SUPERFAMILY SSF56235 2 234 3.95E-76 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Gene3D G3DSA:3.40.50.10490 249 609 1.6E-143 T 14-10-2018 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Pfam PF01380 SIS domain 463 592 1.5E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Pfam PF01380 SIS domain 290 419 2.0E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Gene3D G3DSA:3.60.20.10 2 241 2.8E-82 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 SUPERFAMILY SSF53697 245 610 1.48E-111 T 14-10-2018 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.365 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VEJY3_01740 cc6ab7a032d025b1af6382c17db9b179 610 Gene3D G3DSA:3.40.50.10490 448 595 1.6E-143 T 14-10-2018 VEJY3_03315 7b34adde3c19f1173321aa76a08c2e20 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_03315 7b34adde3c19f1173321aa76a08c2e20 373 Pfam PF01098 Cell cycle protein 24 367 1.5E-112 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_03315 7b34adde3c19f1173321aa76a08c2e20 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 27.869 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_23436 ad2b447d56a75fae0dcbfbef42ef9fb0 91 Gene3D G3DSA:3.40.630.30 1 91 1.9E-21 T 14-10-2018 VEJY3_23436 ad2b447d56a75fae0dcbfbef42ef9fb0 91 SUPERFAMILY SSF55729 1 90 1.6E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_23436 ad2b447d56a75fae0dcbfbef42ef9fb0 91 Pfam PF14542 GCN5-related N-acetyl-transferase 15 89 8.4E-21 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 3.7E-135 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 SUPERFAMILY SSF53720 2 484 5.11E-141 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 Gene3D G3DSA:3.40.605.10 24 458 7.6E-140 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 Gene3D G3DSA:3.40.309.10 250 450 7.6E-140 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_20611 323510baf15158430c70b7fb2cfb015e 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 481 5.1E-236 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VEJY3_15085 b93155321c16735a850e6f2a7941d364 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 6.3E-106 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VEJY3_02810 3575764e929faa8a11f09e96cab0fe3f 74 Gene3D G3DSA:2.10.290.10 2 71 1.1E-26 T 14-10-2018 IPR029037 YfgJ-like VEJY3_02810 3575764e929faa8a11f09e96cab0fe3f 74 SUPERFAMILY SSF161187 3 70 5.1E-27 T 14-10-2018 VEJY3_02810 3575764e929faa8a11f09e96cab0fe3f 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 4.0E-29 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VEJY3_02810 3575764e929faa8a11f09e96cab0fe3f 74 Pfam PF07191 zinc-ribbons 5 68 4.3E-27 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 SMART SM00332 4 240 5.6E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 SUPERFAMILY SSF81606 11 244 1.31E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 Gene3D G3DSA:3.60.40.10 2 245 1.0E-46 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 Pfam PF13672 Protein phosphatase 2C 25 204 2.5E-12 T 14-10-2018 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 Pfam PF00069 Protein kinase domain 277 534 1.0E-34 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 SMART SM00331 29 242 4.5E-7 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 394 406 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 SMART SM00220 275 552 1.3E-13 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 Gene3D G3DSA:1.10.510.10 267 536 2.6E-45 T 14-10-2018 VEJY3_18666 2fec3a2e836ece902430103e3f1a9956 584 SUPERFAMILY SSF56112 259 535 8.23E-51 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_09835 cb584b4652c662090d19f172deef6a47 102 Gene3D G3DSA:3.40.960.10 1 102 1.3E-11 T 14-10-2018 VEJY3_09835 cb584b4652c662090d19f172deef6a47 102 SUPERFAMILY SSF52980 5 90 3.75E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_07695 c04f2a362aa666116894b5dd7fcbf079 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 3.4E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_07695 c04f2a362aa666116894b5dd7fcbf079 401 SUPERFAMILY SSF161098 193 382 6.02E-23 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07695 c04f2a362aa666116894b5dd7fcbf079 401 SUPERFAMILY SSF161098 92 160 1.96E-11 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07695 c04f2a362aa666116894b5dd7fcbf079 401 Gene3D G3DSA:1.10.3720.10 79 183 9.1E-14 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07695 c04f2a362aa666116894b5dd7fcbf079 401 Gene3D G3DSA:1.10.3720.10 184 397 1.7E-31 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 SUPERFAMILY SSF53067 5 256 1.85E-94 T 14-10-2018 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 SUPERFAMILY SSF53067 255 497 2.04E-84 T 14-10-2018 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.311 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 1.9E-226 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 Gene3D G3DSA:3.30.420.40 255 501 8.0E-93 T 14-10-2018 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 Gene3D G3DSA:3.30.420.40 2 254 8.4E-114 T 14-10-2018 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.9E-87 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 PIRSF PIRSF000538 4 503 1.2E-176 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_12395 5b4f2d9d00b29f5250960c65ea237c58 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 1.0E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 SUPERFAMILY SSF52172 3 183 6.34E-43 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 SMART SM00448 3 116 1.9E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 Gene3D G3DSA:1.10.10.10 127 228 1.7E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 14-10-2018 VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 SMART SM00862 150 225 1.4E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_02600 a2c770e3585b99add5b3f07e2c7118d1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 7.7E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_20346 68d66198674ff2874565865767f408c6 942 SUPERFAMILY SSF47336 20 99 7.85E-10 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_20346 68d66198674ff2874565865767f408c6 942 Pfam PF00501 AMP-binding enzyme 129 567 7.0E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_20346 68d66198674ff2874565865767f408c6 942 Gene3D G3DSA:1.10.1200.10 1 96 6.8E-13 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_20346 68d66198674ff2874565865767f408c6 942 SMART SM00563 771 885 2.5E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_20346 68d66198674ff2874565865767f408c6 942 Gene3D G3DSA:3.40.50.12780 104 561 1.9E-141 T 14-10-2018 VEJY3_20346 68d66198674ff2874565865767f408c6 942 Pfam PF01553 Acyltransferase 756 881 2.7E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_20346 68d66198674ff2874565865767f408c6 942 SUPERFAMILY SSF56801 114 671 8.11E-116 T 14-10-2018 VEJY3_20346 68d66198674ff2874565865767f408c6 942 Pfam PF00550 Phosphopantetheine attachment site 36 89 2.0E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEJY3_20346 68d66198674ff2874565865767f408c6 942 ProSitePatterns PS00455 Putative AMP-binding domain signature. 284 295 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_20346 68d66198674ff2874565865767f408c6 942 SUPERFAMILY SSF69593 691 932 4.45E-30 T 14-10-2018 VEJY3_20346 68d66198674ff2874565865767f408c6 942 Gene3D G3DSA:3.30.300.30 563 682 4.5E-26 T 14-10-2018 VEJY3_13625 ffbc774bb25aeec558ef71d76fefb772 129 SUPERFAMILY SSF55298 2 128 4.56E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_13625 ffbc774bb25aeec558ef71d76fefb772 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 7.0E-45 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEJY3_13625 ffbc774bb25aeec558ef71d76fefb772 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VEJY3_13625 ffbc774bb25aeec558ef71d76fefb772 129 Gene3D G3DSA:3.30.1330.40 2 129 7.9E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_13625 ffbc774bb25aeec558ef71d76fefb772 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.5E-53 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.23 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 9.9E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 1.3E-78 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 Gene3D G3DSA:2.40.50.140 5 151 4.4E-29 T 14-10-2018 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 SUPERFAMILY SSF50249 12 149 2.94E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 SUPERFAMILY SSF55681 156 502 2.21E-116 T 14-10-2018 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 Gene3D G3DSA:3.30.930.10 152 505 5.0E-129 T 14-10-2018 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_02320 1c5d1c11036a62b2ef7e6236a6cd03a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 6.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 Pfam PF01546 Peptidase family M20/M25/M40 82 406 2.4E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 Gene3D G3DSA:3.30.70.360 215 328 3.7E-133 T 14-10-2018 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 Gene3D G3DSA:3.40.630.10 16 404 3.7E-133 T 14-10-2018 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 SUPERFAMILY SSF53187 2 409 8.0E-83 T 14-10-2018 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 SUPERFAMILY SSF55031 215 330 1.15E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 PIRSF PIRSF001235 6 413 4.8E-125 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 VEJY3_20961 29f6019dcd1bd213df9d7fa84ec193f1 415 Pfam PF07687 Peptidase dimerisation domain 214 310 3.7E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_18676 61557fe9fc496765d0d5c7ca1b2cdd1d 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 5.5E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEJY3_18676 61557fe9fc496765d0d5c7ca1b2cdd1d 108 SUPERFAMILY SSF50022 1 107 1.12E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_18676 61557fe9fc496765d0d5c7ca1b2cdd1d 108 Gene3D G3DSA:2.102.10.10 1 108 1.2E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_18676 61557fe9fc496765d0d5c7ca1b2cdd1d 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 2.0E-34 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEJY3_22521 c5fb305862d7df52f6d111f576ae45f6 233 Pfam PF08279 HTH domain 6 60 3.1E-19 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VEJY3_22521 c5fb305862d7df52f6d111f576ae45f6 233 SUPERFAMILY SSF46785 1 62 1.79E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22521 c5fb305862d7df52f6d111f576ae45f6 233 Gene3D G3DSA:1.10.10.10 1 63 3.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22521 c5fb305862d7df52f6d111f576ae45f6 233 Pfam PF13280 WYL domain 138 220 1.2E-9 T 14-10-2018 IPR026881 WYL domain VEJY3_10140 89e230ed3428f64ba35e4b1575e19468 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10140 89e230ed3428f64ba35e4b1575e19468 377 Gene3D G3DSA:1.10.620.20 2 341 1.5E-143 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VEJY3_10140 89e230ed3428f64ba35e4b1575e19468 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 2.1E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_10140 89e230ed3428f64ba35e4b1575e19468 377 SUPERFAMILY SSF47240 3 341 1.73E-111 T 14-10-2018 IPR009078 Ferritin-like superfamily VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 SMART SM01007 8 182 1.4E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 Gene3D G3DSA:3.40.225.10 1 215 3.1E-75 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 SUPERFAMILY SSF53639 1 212 2.35E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 6.1E-126 T 14-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 8.4E-45 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_21146 c3af3b1dd1e9b1c304ccba0dcbfb53c1 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 55.79 T 14-10-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 VEJY3_10885 124926d0a68a80a88046869171ae7546 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 1.6E-34 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_10885 124926d0a68a80a88046869171ae7546 170 SUPERFAMILY SSF53218 7 168 1.57E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_10885 124926d0a68a80a88046869171ae7546 170 Gene3D G3DSA:3.40.980.10 2 170 1.2E-51 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_10885 124926d0a68a80a88046869171ae7546 170 SMART SM00852 14 158 1.0E-27 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_10885 124926d0a68a80a88046869171ae7546 170 PIRSF PIRSF006443 1 166 7.3E-67 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VEJY3_10885 124926d0a68a80a88046869171ae7546 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 SUPERFAMILY SSF56601 315 749 5.43E-102 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 PIRSF PIRSF002799 2 779 2.3E-300 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 666 6.0E-25 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Pfam PF14814 Bifunctional transglycosylase second domain 66 149 1.3E-23 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 165 700 1.2E-153 T 14-10-2018 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Pfam PF00912 Transglycosylase 162 333 1.5E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Gene3D G3DSA:1.10.3810.10 154 357 9.9E-255 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 24 743 7.4E-283 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Gene3D G3DSA:3.40.710.10 56 713 9.9E-255 T 14-10-2018 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 Gene3D G3DSA:3.30.2060.10 64 153 9.9E-255 T 14-10-2018 VEJY3_18031 91403fbf8ac8e6b5ead0e79ca37f17a8 780 SUPERFAMILY SSF53955 155 357 2.7E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_21826 448b57dea2f53133d7cdb4c52918926f 314 SUPERFAMILY SSF103481 59 142 3.79E-6 T 14-10-2018 VEJY3_21826 448b57dea2f53133d7cdb4c52918926f 314 SUPERFAMILY SSF103481 193 290 2.35E-8 T 14-10-2018 VEJY3_21826 448b57dea2f53133d7cdb4c52918926f 314 Pfam PF00892 EamA-like transporter family 160 287 1.4E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_02420 38da63d090f0ef535e663de79a96a498 143 SUPERFAMILY SSF54534 4 142 3.73E-37 T 14-10-2018 VEJY3_02420 38da63d090f0ef535e663de79a96a498 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 4.7E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_02420 38da63d090f0ef535e663de79a96a498 143 Gene3D G3DSA:2.40.10.330 72 128 2.4E-43 T 14-10-2018 VEJY3_02420 38da63d090f0ef535e663de79a96a498 143 Gene3D G3DSA:3.10.50.40 13 140 2.4E-43 T 14-10-2018 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.2E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 SUPERFAMILY SSF81338 9 254 1.7E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 Pfam PF00230 Major intrinsic protein 6 252 3.4E-64 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 Gene3D G3DSA:1.20.1080.10 4 260 1.4E-96 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_12390 fa2dd6e563a616fe2fcfb1ddeaab6a6b 283 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 SUPERFAMILY SSF53850 90 285 1.03E-20 T 14-10-2018 VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 SUPERFAMILY SSF46785 3 83 6.19E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 Pfam PF03466 LysR substrate binding domain 86 281 7.6E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 Gene3D G3DSA:1.10.10.10 1 92 9.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 Gene3D G3DSA:3.40.190.10 98 277 1.4E-39 T 14-10-2018 VEJY3_16696 532f45bd319adee8625fb53d8f2cfff4 287 Gene3D G3DSA:3.40.190.10 158 252 1.4E-39 T 14-10-2018 VEJY3_19096 a628a1163379c614e7c90a417740e220 618 Pfam PF01435 Peptidase family M48 104 330 1.6E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEJY3_19096 a628a1163379c614e7c90a417740e220 618 SUPERFAMILY SSF158682 508 611 5.49E-5 T 14-10-2018 IPR029024 TerB-like VEJY3_19096 a628a1163379c614e7c90a417740e220 618 Gene3D G3DSA:3.30.2010.10 95 188 3.2E-32 T 14-10-2018 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 49.424 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 SUPERFAMILY SSF51735 3 154 1.26E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 Gene3D G3DSA:3.40.50.720 4 317 5.9E-106 T 14-10-2018 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 SUPERFAMILY SSF55347 133 297 1.57E-17 T 14-10-2018 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 Gene3D G3DSA:3.30.360.10 144 266 5.9E-106 T 14-10-2018 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 1.9E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_08675 13a0d13db013639e6c9038bdebd49249 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 6.7E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 Pfam PF00990 Diguanylate cyclase, GGDEF domain 79 227 2.2E-23 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 SUPERFAMILY SSF141868 249 496 6.67E-73 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 Pfam PF00563 EAL domain 249 484 4.2E-66 T 14-10-2018 IPR001633 EAL domain VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 SUPERFAMILY SSF55073 83 229 3.37E-23 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 SMART SM00267 66 233 5.3E-21 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 Gene3D G3DSA:3.30.70.270 71 239 3.6E-28 T 14-10-2018 VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 Gene3D G3DSA:3.20.20.450 244 497 2.1E-78 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_20851 224ce18543aedf7be5ab3c751c2bb841 506 SMART SM00052 243 489 6.0E-76 T 14-10-2018 IPR001633 EAL domain VEJY3_05640 a0d6cd17053360d036dcac3fa944b61b 286 Pfam PF01226 Formate/nitrite transporter 14 275 6.7E-73 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEJY3_05640 a0d6cd17053360d036dcac3fa944b61b 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEJY3_05640 a0d6cd17053360d036dcac3fa944b61b 286 Gene3D G3DSA:1.20.1080.10 27 280 4.9E-94 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_03880 20ec156c4dd05788dd2db180038dbd97 261 SUPERFAMILY SSF52540 4 219 3.74E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03880 20ec156c4dd05788dd2db180038dbd97 261 Gene3D G3DSA:3.40.50.300 1 230 8.1E-56 T 14-10-2018 VEJY3_03880 20ec156c4dd05788dd2db180038dbd97 261 Pfam PF00005 ABC transporter 20 148 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_03880 20ec156c4dd05788dd2db180038dbd97 261 SMART SM00382 29 199 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 256 276 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 181 196 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 313 329 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 203 231 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 333 347 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PRINTS PR00143 Citrate synthase signature 130 143 3.5E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 Gene3D G3DSA:1.10.580.10 36 360 2.0E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 PIRSF PIRSF001369 7 380 4.7E-117 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 SUPERFAMILY SSF48256 14 380 1.06E-124 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 Gene3D G3DSA:1.10.230.10 229 327 2.0E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VEJY3_07850 bed5af1b6dfa5c6a30d87ca0b90ecfe3 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.0E-113 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_19736 e10ba49f65af85131e264c7ca447e181 253 Gene3D G3DSA:3.40.190.10 28 249 6.9E-76 T 14-10-2018 VEJY3_19736 e10ba49f65af85131e264c7ca447e181 253 SUPERFAMILY SSF53850 25 249 1.37E-59 T 14-10-2018 VEJY3_19736 e10ba49f65af85131e264c7ca447e181 253 Gene3D G3DSA:3.40.190.10 104 215 6.9E-76 T 14-10-2018 VEJY3_19736 e10ba49f65af85131e264c7ca447e181 253 PIRSF PIRSF004846 1 253 2.0E-68 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VEJY3_19736 e10ba49f65af85131e264c7ca447e181 253 Pfam PF13531 Bacterial extracellular solute-binding protein 26 249 3.4E-43 T 14-10-2018 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 PIRSF PIRSF000382 2 760 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 SUPERFAMILY SSF51726 4 393 1.23E-108 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 2.3E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 SUPERFAMILY SSF51726 396 757 3.53E-112 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.821 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 9.5E-148 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEJY3_10335 e28035d792e80b0a1064479bb6440a5e 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 Gene3D G3DSA:3.40.50.300 12 165 3.3E-7 T 14-10-2018 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 Gene3D G3DSA:1.10.10.10 829 900 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 SUPERFAMILY SSF46894 831 894 9.86E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 Gene3D G3DSA:1.25.40.10 443 811 4.0E-84 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 SMART SM00421 836 893 7.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.595 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 SUPERFAMILY SSF52540 14 230 3.19E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 SUPERFAMILY SSF48452 442 805 3.4E-156 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23716 e838c7dca2b79c5731163c05b0098b1b 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 1.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10950 36df2c3fd226bc290e8aa94be62e8c60 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 5.9E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_10950 36df2c3fd226bc290e8aa94be62e8c60 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEJY3_10950 36df2c3fd226bc290e8aa94be62e8c60 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEJY3_10950 36df2c3fd226bc290e8aa94be62e8c60 138 Gene3D G3DSA:3.10.180.10 3 135 2.2E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_10950 36df2c3fd226bc290e8aa94be62e8c60 138 SUPERFAMILY SSF54593 3 130 2.55E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_08695 a8b30c4fa8b45d5a1575bd8fa16e54e5 106 SUPERFAMILY SSF52091 6 101 2.16E-20 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_08695 a8b30c4fa8b45d5a1575bd8fa16e54e5 106 Gene3D G3DSA:3.30.750.24 2 105 1.6E-18 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_08695 a8b30c4fa8b45d5a1575bd8fa16e54e5 106 Pfam PF01740 STAS domain 6 99 3.0E-11 T 14-10-2018 IPR002645 STAS domain VEJY3_13505 c11fb2e6e66ae9ac91dc4f64649b6d4c 239 Gene3D G3DSA:3.40.50.150 29 239 1.2E-71 T 14-10-2018 VEJY3_13505 c11fb2e6e66ae9ac91dc4f64649b6d4c 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 31.033 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VEJY3_13505 c11fb2e6e66ae9ac91dc4f64649b6d4c 239 SUPERFAMILY SSF53335 16 237 2.39E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_13505 c11fb2e6e66ae9ac91dc4f64649b6d4c 239 Pfam PF02390 Putative methyltransferase 62 232 3.6E-59 T 14-10-2018 VEJY3_01935 7d62506119f651e87ec407d9ce8c0cb0 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 1.8E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_01935 7d62506119f651e87ec407d9ce8c0cb0 268 Gene3D G3DSA:3.60.21.10 1 265 1.3E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_01935 7d62506119f651e87ec407d9ce8c0cb0 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 2.0E-23 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VEJY3_01935 7d62506119f651e87ec407d9ce8c0cb0 268 SUPERFAMILY SSF56300 6 251 6.28E-58 T 14-10-2018 VEJY3_01935 7d62506119f651e87ec407d9ce8c0cb0 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 40.927 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 SUPERFAMILY SSF46689 9 85 2.69E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 82 3.6E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 Gene3D G3DSA:3.40.50.10490 108 281 2.0E-28 T 14-10-2018 VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 Gene3D G3DSA:1.10.10.10 5 85 1.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 Pfam PF01380 SIS domain 140 265 9.7E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_08655 892dc5e9cc83b295075dbe20e347e6bf 283 SUPERFAMILY SSF53697 110 270 1.2E-23 T 14-10-2018 VEJY3_09260 62119ed9125dc7bf3579cce7b6c15e3f 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 246 2.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_09260 62119ed9125dc7bf3579cce7b6c15e3f 256 SUPERFAMILY SSF161098 15 244 4.71E-56 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09260 62119ed9125dc7bf3579cce7b6c15e3f 256 Gene3D G3DSA:1.10.3720.10 11 254 5.4E-66 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16281 d404efaa14ce7f74a060424a3f879cdc 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 6.9E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_16281 d404efaa14ce7f74a060424a3f879cdc 693 Gene3D G3DSA:2.40.170.20 161 693 2.0E-101 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_16281 d404efaa14ce7f74a060424a3f879cdc 693 SUPERFAMILY SSF56935 17 693 4.35E-117 T 14-10-2018 VEJY3_16281 d404efaa14ce7f74a060424a3f879cdc 693 Pfam PF00593 TonB dependent receptor 238 692 1.1E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_16281 d404efaa14ce7f74a060424a3f879cdc 693 Gene3D G3DSA:2.170.130.10 35 160 1.3E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_11825 4512956b42a6070998b95827231746e8 377 Gene3D G3DSA:1.10.10.10 313 372 5.0E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11825 4512956b42a6070998b95827231746e8 377 Pfam PF00196 Bacterial regulatory proteins, luxR family 314 363 2.2E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_11825 4512956b42a6070998b95827231746e8 377 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 313 327 1.3E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_11825 4512956b42a6070998b95827231746e8 377 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 327 343 1.3E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_11825 4512956b42a6070998b95827231746e8 377 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 343 355 1.3E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_11825 4512956b42a6070998b95827231746e8 377 SMART SM00421 310 367 8.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_11825 4512956b42a6070998b95827231746e8 377 SUPERFAMILY SSF46894 308 367 2.86E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 Gene3D G3DSA:3.40.50.720 1 230 5.4E-61 T 14-10-2018 VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 Pfam PF00106 short chain dehydrogenase 3 190 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_09085 f626b7a91dad27f0aac8f958fbe7a417 230 SUPERFAMILY SSF51735 1 230 2.65E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16056 ba8cfa4df3fc66451a51f702da8e5dfe 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_16056 ba8cfa4df3fc66451a51f702da8e5dfe 309 Pfam PF00294 pfkB family carbohydrate kinase 8 304 1.3E-57 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_16056 ba8cfa4df3fc66451a51f702da8e5dfe 309 SUPERFAMILY SSF53613 6 301 1.18E-69 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_16056 ba8cfa4df3fc66451a51f702da8e5dfe 309 Gene3D G3DSA:3.40.1190.20 4 308 3.4E-76 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_01290 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01290 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VEJY3_01290 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VEJY3_01290 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEJY3_01290 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 SUPERFAMILY SSF52374 4 667 1.9E-146 T 14-10-2018 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.9E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 3.0E-26 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 1.1E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 3.8E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 1.1E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.41 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 SUPERFAMILY SSF50677 226 415 1.47E-57 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Gene3D G3DSA:3.10.20.590 797 857 5.4E-25 T 14-10-2018 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 14-10-2018 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 SUPERFAMILY SSF47323 661 857 3.55E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03345 365469508b360dc5fd13d37841555f5c 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 14-10-2018 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 SUPERFAMILY SSF55136 154 299 4.01E-30 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 SMART SM00871 150 299 5.9E-22 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 Pfam PF06445 GyrI-like small molecule binding domain 155 298 1.0E-24 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 SUPERFAMILY SSF46689 7 57 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 Gene3D G3DSA:1.10.10.60 60 121 4.4E-13 T 14-10-2018 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 SMART SM00342 23 106 6.3E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 Gene3D G3DSA:3.20.80.10 152 299 8.6E-37 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 Pfam PF12833 Helix-turn-helix domain 30 106 6.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 SUPERFAMILY SSF46689 59 107 6.81E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24226 98ac964c33be28aa407900bd900bf2cc 299 Gene3D G3DSA:1.10.10.60 10 57 4.8E-13 T 14-10-2018 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 Gene3D G3DSA:3.40.50.1980 179 291 6.2E-40 T 14-10-2018 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 PRINTS PR00690 Adhesin family signature 50 63 3.3E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 PRINTS PR00690 Adhesin family signature 178 199 3.3E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 PRINTS PR00690 Adhesin family signature 63 80 3.3E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 PRINTS PR00690 Adhesin family signature 231 249 3.3E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 Gene3D G3DSA:3.40.50.1980 21 178 1.4E-47 T 14-10-2018 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 288 3.4E-59 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VEJY3_03885 5fec1e6569361d1abbb13cfe600cde59 292 SUPERFAMILY SSF53807 12 290 8.83E-75 T 14-10-2018 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 Gene3D G3DSA:3.20.20.80 115 553 1.3E-137 T 14-10-2018 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 Gene3D G3DSA:2.60.40.1180 555 649 5.0E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 Pfam PF00128 Alpha amylase, catalytic domain 197 253 5.0E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 SUPERFAMILY SSF51445 112 542 4.91E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 Gene3D G3DSA:2.60.40.10 4 114 1.8E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 SMART SM00642 145 547 5.3E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 SUPERFAMILY SSF51011 556 648 1.26E-13 T 14-10-2018 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.5E-9 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEJY3_23786 c356b53ff5eaa38ccdabb7996478a385 660 SUPERFAMILY SSF81296 7 124 1.78E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_13410 e5c571c1d82964dbcbd14b28157eeaeb 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 5.4E-27 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 Gene3D G3DSA:3.30.9.50 100 294 3.3E-95 T 14-10-2018 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 Pfam PF01494 FAD binding domain 24 360 3.5E-26 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 25 47 3.0E-17 T 14-10-2018 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 3.0E-17 T 14-10-2018 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 3.0E-17 T 14-10-2018 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 320 3.0E-17 T 14-10-2018 VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 SUPERFAMILY SSF51905 24 403 1.53E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_03380 3e3dcc2086ee8211f9261c7ffa51c6ac 411 Gene3D G3DSA:3.50.50.60 25 358 3.3E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 Gene3D G3DSA:3.40.50.720 1 261 3.5E-53 T 14-10-2018 VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 SUPERFAMILY SSF51735 1 260 5.6E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08025 3fbff0345960f061128bccfe1f15365d 264 Pfam PF00106 short chain dehydrogenase 7 192 1.1E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 Pfam PF01380 SIS domain 124 252 9.2E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 SUPERFAMILY SSF53697 93 279 9.91E-40 T 14-10-2018 VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 Gene3D G3DSA:3.40.50.10490 94 276 6.3E-39 T 14-10-2018 VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05970 92cdd6a7f534874bf6a7c51ce335144a 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09920 53d79f700758d2d9e877670d76503bb5 411 Gene3D G3DSA:1.10.443.10 197 408 2.4E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_09920 53d79f700758d2d9e877670d76503bb5 411 Pfam PF12167 Arm DNA-binding domain 4 68 2.3E-22 T 14-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VEJY3_09920 53d79f700758d2d9e877670d76503bb5 411 SUPERFAMILY SSF56349 83 398 7.77E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_09920 53d79f700758d2d9e877670d76503bb5 411 Gene3D G3DSA:1.10.150.130 79 189 2.2E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_09920 53d79f700758d2d9e877670d76503bb5 411 Pfam PF00589 Phage integrase family 200 388 1.2E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Gene3D G3DSA:1.10.287.130 319 415 2.4E-25 T 14-10-2018 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 4.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Gene3D G3DSA:3.40.50.2300 586 717 1.3E-30 T 14-10-2018 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SUPERFAMILY SSF55874 406 579 3.27E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Pfam PF00072 Response regulator receiver domain 601 712 1.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SMART SM00388 352 417 5.7E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 578 1.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SUPERFAMILY SSF52172 596 726 9.68E-28 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Gene3D G3DSA:3.30.565.10 416 580 1.5E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SUPERFAMILY SSF47384 339 418 1.29E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SMART SM00387 464 579 1.1E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 SMART SM00448 598 712 2.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_05005 6ba65a1639a20a752c773452ab2d24b7 808 Gene3D G3DSA:3.30.450.20 30 204 6.3E-22 T 14-10-2018 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Gene3D G3DSA:1.20.1640.10 451 603 4.2E-7 T 14-10-2018 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Gene3D G3DSA:3.30.1360.200 281 434 6.2E-50 T 14-10-2018 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.8E-36 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Pfam PF02355 Protein export membrane protein 436 597 9.0E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEJY3_02700 11bf54bf877431a491fde639766937e1 618 SUPERFAMILY SSF82866 413 609 3.92E-44 T 14-10-2018 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Gene3D G3DSA:3.30.70.3400 222 440 6.2E-50 T 14-10-2018 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.97 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEJY3_02700 11bf54bf877431a491fde639766937e1 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_02700 11bf54bf877431a491fde639766937e1 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 9.8E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Gene3D G3DSA:3.30.1370.120 188 258 1.3E-19 T 14-10-2018 IPR038591 NolW-like superfamily VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 1.1E-158 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Gene3D G3DSA:3.30.1370.120 21 185 5.7E-52 T 14-10-2018 IPR038591 NolW-like superfamily VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 4.5E-37 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 4.5E-37 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 4.5E-37 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 4.5E-37 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 4.5E-37 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR01032 Gene IV protein signature 470 493 5.0E-12 T 14-10-2018 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR01032 Gene IV protein signature 538 566 5.0E-12 T 14-10-2018 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 PRINTS PR01032 Gene IV protein signature 591 613 5.0E-12 T 14-10-2018 VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Gene3D G3DSA:3.30.1370.120 263 342 5.7E-17 T 14-10-2018 IPR038591 NolW-like superfamily VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 1.8E-15 T 14-10-2018 IPR005644 NolW-like VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 14-10-2018 IPR005644 NolW-like VEJY3_00610 3942c84571e5edfabb334b77e49671e8 673 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 3.6E-18 T 14-10-2018 IPR005644 NolW-like VEJY3_13015 7d059576a34a733d2321aba26eb221e4 181 Gene3D G3DSA:3.40.80.10 4 181 1.5E-53 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEJY3_13015 7d059576a34a733d2321aba26eb221e4 181 SMART SM00644 18 169 1.1E-50 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEJY3_13015 7d059576a34a733d2321aba26eb221e4 181 SUPERFAMILY SSF55846 4 180 1.7E-63 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEJY3_13015 7d059576a34a733d2321aba26eb221e4 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 4.0E-26 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 SUPERFAMILY SSF46785 4 77 2.54E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 Gene3D G3DSA:1.10.10.10 1 74 3.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 5.0E-20 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 4.8E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.0E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.0E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.0E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.0E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.778 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 SUPERFAMILY SSF55252 82 151 9.42E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 4.2E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VEJY3_01585 0ab9d2cd38b4eaabd392e741849f916e 156 Gene3D G3DSA:3.30.1360.40 75 156 4.1E-34 T 14-10-2018 VEJY3_12575 eb182f1411dd103ee4dec56c84aebddd 326 Gene3D G3DSA:3.30.70.2020 8 322 2.6E-164 T 14-10-2018 VEJY3_12575 eb182f1411dd103ee4dec56c84aebddd 326 SUPERFAMILY SSF56784 107 310 2.14E-48 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_12575 eb182f1411dd103ee4dec56c84aebddd 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.9E-14 T 14-10-2018 VEJY3_12575 eb182f1411dd103ee4dec56c84aebddd 326 Gene3D G3DSA:3.40.50.1000 2 310 2.6E-164 T 14-10-2018 IPR023214 HAD superfamily VEJY3_12575 eb182f1411dd103ee4dec56c84aebddd 326 Gene3D G3DSA:1.10.150.210 115 177 2.6E-164 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 Gene3D G3DSA:3.40.140.10 137 275 1.1E-37 T 14-10-2018 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 SUPERFAMILY SSF53927 29 274 1.59E-66 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 276 25.807 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 Pfam PF02634 FdhD/NarQ family 42 273 2.2E-62 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 Gene3D G3DSA:3.10.20.10 43 128 9.3E-9 T 14-10-2018 VEJY3_19641 3135e1ef9e31690e125be5981e731d1c 276 PIRSF PIRSF015626 13 276 7.1E-67 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_04560 f4454e71ea35240ca01acec2173bac6a 252 Pfam PF02348 Cytidylyltransferase 5 221 9.3E-66 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VEJY3_04560 f4454e71ea35240ca01acec2173bac6a 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.524 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VEJY3_04560 f4454e71ea35240ca01acec2173bac6a 252 SUPERFAMILY SSF53448 3 246 3.15E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_04560 f4454e71ea35240ca01acec2173bac6a 252 Gene3D G3DSA:3.90.550.10 1 251 1.8E-96 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_16411 e4774c0e72b3298242b5b34164dff243 198 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 20 195 2.5E-31 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VEJY3_16411 e4774c0e72b3298242b5b34164dff243 198 SUPERFAMILY SSF51197 7 197 1.79E-68 T 14-10-2018 VEJY3_16411 e4774c0e72b3298242b5b34164dff243 198 Gene3D G3DSA:2.60.120.590 3 198 4.0E-69 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VEJY3_00960 2aee394834a1a0f8bd434f017427e9b3 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 3.9E-248 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SUPERFAMILY SSF52172 769 894 3.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:1.10.287.130 359 457 7.8E-30 T 14-10-2018 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SUPERFAMILY SSF55874 448 618 6.16E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Pfam PF00072 Response regulator receiver domain 935 1050 3.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Pfam PF00072 Response regulator receiver domain 771 886 6.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 2.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SMART SM00448 933 1050 7.1E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SMART SM00448 769 886 1.1E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:3.40.50.2300 991 1054 2.1E-23 T 14-10-2018 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:3.40.50.2300 826 904 1.6E-21 T 14-10-2018 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:3.30.565.10 459 627 8.7E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:3.40.50.12330 763 825 4.9E-20 T 14-10-2018 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Gene3D G3DSA:3.40.50.12330 924 990 3.0E-21 T 14-10-2018 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 618 5.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SMART SM00387 506 622 8.2E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SUPERFAMILY SSF52172 932 1052 8.4E-37 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SMART SM00388 394 459 4.8E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_08220 d51a7dc791485d5ff063fee0e184659f 1054 SUPERFAMILY SSF47384 382 459 3.92E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_07055 356ca260d3022d3e74713c2fc796ca2c 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 8.5E-19 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_07055 356ca260d3022d3e74713c2fc796ca2c 171 Gene3D G3DSA:2.40.160.20 19 170 4.6E-25 T 14-10-2018 VEJY3_07055 356ca260d3022d3e74713c2fc796ca2c 171 SUPERFAMILY SSF56925 17 170 6.02E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 Gene3D G3DSA:1.20.120.220 92 267 7.6E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 Pfam PF00119 ATP synthase A chain 44 262 1.5E-57 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 SUPERFAMILY SSF81336 93 262 1.83E-49 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.204 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15480 2a6928d3328c5f2dc04bf0a45a09d080 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14010 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 SUPERFAMILY SSF75217 1 245 9.16E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 118.45 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 Gene3D G3DSA:3.40.1280.10 1 160 3.1E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 5.8E-70 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 PIRSF PIRSF000386 1 252 1.7E-101 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEJY3_13065 88feb9ad02634add8080de4cacef5dc1 253 Gene3D G3DSA:1.10.1270.20 161 253 2.2E-35 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 543 1.7E-32 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 SUPERFAMILY SSF55486 202 449 7.33E-75 T 14-10-2018 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 SUPERFAMILY SSF63737 2 192 1.44E-46 T 14-10-2018 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Gene3D G3DSA:1.25.50.10 545 867 2.0E-115 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Gene3D G3DSA:2.60.40.1730 15 193 9.9E-70 T 14-10-2018 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Pfam PF01433 Peptidase family M1 domain 207 435 1.7E-57 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Gene3D G3DSA:1.10.1740.60 194 278 5.6E-40 T 14-10-2018 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 3.6E-114 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Gene3D G3DSA:1.10.390.10 279 442 9.0E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VEJY3_07610 e250cf061dbee8e5658da08ede8ca407 868 Gene3D G3DSA:2.60.40.1840 443 544 1.2E-34 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VEJY3_04485 c409f8c505848ed8dde9ed7f47b2ab97 293 Pfam PF01636 Phosphotransferase enzyme family 30 230 4.9E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VEJY3_04485 c409f8c505848ed8dde9ed7f47b2ab97 293 Gene3D G3DSA:3.90.1200.10 110 284 2.4E-14 T 14-10-2018 VEJY3_04485 c409f8c505848ed8dde9ed7f47b2ab97 293 SUPERFAMILY SSF56112 11 270 4.23E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 317 3.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Pfam PF00672 HAMP domain 203 251 8.5E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Gene3D G3DSA:1.10.287.130 261 320 7.6E-11 T 14-10-2018 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 476 3.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SUPERFAMILY SSF47384 240 318 7.65E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SMART SM00388 256 320 5.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Gene3D G3DSA:1.20.1480.50 168 260 2.1E-12 T 14-10-2018 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SUPERFAMILY SSF158472 203 252 2.48E-9 T 14-10-2018 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 Gene3D G3DSA:3.30.565.10 323 477 2.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SMART SM00304 203 255 5.8E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SUPERFAMILY SSF55874 323 476 4.45E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19351 a70e4ff12caadd09251690dafb3372fa 477 SMART SM00387 366 477 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 Gene3D G3DSA:3.40.50.300 282 528 7.8E-50 T 14-10-2018 VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 SUPERFAMILY SSF52540 7 237 7.51E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 SUPERFAMILY SSF52540 299 521 5.1E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 Gene3D G3DSA:3.40.50.300 2 281 7.2E-57 T 14-10-2018 VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 Pfam PF00005 ABC transporter 338 466 4.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 Pfam PF00005 ABC transporter 18 184 1.6E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 SMART SM00382 26 238 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07190 239b72ca7e8649bb803f5ecebd2c93be 530 SMART SM00382 343 511 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 Pfam PF00266 Aminotransferase class-V 13 350 2.6E-39 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 Gene3D G3DSA:3.90.1150.10 9 371 3.1E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 SUPERFAMILY SSF53383 9 371 2.39E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 PIRSF PIRSF000524 5 373 6.4E-113 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VEJY3_13910 7d0ae282ae6d2524fdcfe2aabdf15362 373 Gene3D G3DSA:3.40.640.10 22 269 3.1E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Pfam PF00800 Prephenate dehydratase 110 291 2.7E-60 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Pfam PF01817 Chorismate mutase type II 12 91 4.2E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 SMART SM00830 12 93 1.5E-22 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Gene3D G3DSA:3.40.190.10 193 278 7.9E-55 T 14-10-2018 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Gene3D G3DSA:3.30.70.260 295 383 5.4E-26 T 14-10-2018 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Gene3D G3DSA:3.40.190.10 113 287 7.9E-55 T 14-10-2018 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 SUPERFAMILY SSF53850 109 295 5.64E-56 T 14-10-2018 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 Gene3D G3DSA:1.20.59.10 3 112 1.1E-30 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 SUPERFAMILY SSF48600 7 95 3.3E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 SUPERFAMILY SSF55021 284 381 1.2E-26 T 14-10-2018 VEJY3_02505 840f4707b6a704628c89398cc91be7f3 392 PIRSF PIRSF001500 1 384 8.5E-143 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEJY3_09375 99174620b333c72db55704d602e590cf 206 Pfam PF01081 KDPG and KHG aldolase 4 198 1.0E-78 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_09375 99174620b333c72db55704d602e590cf 206 Gene3D G3DSA:3.20.20.70 1 206 1.1E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_09375 99174620b333c72db55704d602e590cf 206 SUPERFAMILY SSF51569 2 204 6.04E-68 T 14-10-2018 VEJY3_09375 99174620b333c72db55704d602e590cf 206 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_09375 99174620b333c72db55704d602e590cf 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_09375 99174620b333c72db55704d602e590cf 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 204 3.0E-85 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 3.1E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.1E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 3.1E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 3.1E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 3.1E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 SUPERFAMILY SSF48113 19 431 3.98E-151 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Gene3D G3DSA:1.10.420.10 578 699 6.4E-144 T 14-10-2018 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Gene3D G3DSA:1.10.520.10 433 723 6.4E-144 T 14-10-2018 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Gene3D G3DSA:1.10.520.10 28 432 1.2E-216 T 14-10-2018 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Gene3D G3DSA:1.10.420.20 191 397 1.2E-216 T 14-10-2018 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Pfam PF00141 Peroxidase 71 398 9.4E-50 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Pfam PF00141 Peroxidase 405 698 1.5E-35 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 SUPERFAMILY SSF48113 432 722 1.92E-110 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_19231 99bc442b38069aa9150fd65a5d058bfe 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 39.39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 SUPERFAMILY SSF55681 92 327 1.18E-82 T 14-10-2018 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.085 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 SUPERFAMILY SSF46589 14 99 1.15E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.1E-26 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 9.4E-112 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.9E-106 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VEJY3_06205 7fc3326c943aced4ba38e8c4f2e5c873 327 Gene3D G3DSA:3.30.930.10 8 327 7.3E-127 T 14-10-2018 VEJY3_23831 6f5e66cbd04dbe493faebdd73b0660f9 316 Gene3D G3DSA:1.10.3470.10 4 315 5.1E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23831 6f5e66cbd04dbe493faebdd73b0660f9 316 SUPERFAMILY SSF81345 6 312 2.62E-56 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23831 6f5e66cbd04dbe493faebdd73b0660f9 316 Pfam PF01032 FecCD transport family 20 312 4.9E-53 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_03155 ccd59d7325ea53ea86a753d2b6b94c20 168 PIRSF PIRSF006162 6 167 2.1E-54 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VEJY3_03155 ccd59d7325ea53ea86a753d2b6b94c20 168 SUPERFAMILY SSF101307 9 162 2.49E-49 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VEJY3_03155 ccd59d7325ea53ea86a753d2b6b94c20 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 4.1E-53 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 Gene3D G3DSA:3.30.420.40 8 325 2.9E-42 T 14-10-2018 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 SMART SM00842 6 169 0.0077 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 5.3E-50 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 Gene3D G3DSA:3.30.1490.300 82 141 2.9E-42 T 14-10-2018 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 Gene3D G3DSA:3.30.420.40 182 292 2.9E-42 T 14-10-2018 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 SUPERFAMILY SSF53067 5 160 2.59E-7 T 14-10-2018 VEJY3_14070 146f67b28a96689fcb8dfd2e3c4eff65 338 PIRSF PIRSF019169 1 328 5.3E-88 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VEJY3_18906 ef875bdd0551482be2bcfe04fac85c04 87 Hamap MF_00460 Protein RnfH [rnfH]. 1 84 20.873 T 14-10-2018 IPR005346 RnfH protein VEJY3_18906 ef875bdd0551482be2bcfe04fac85c04 87 SUPERFAMILY SSF54285 1 75 3.14E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEJY3_18906 ef875bdd0551482be2bcfe04fac85c04 87 Gene3D G3DSA:3.10.20.280 1 83 1.9E-27 T 14-10-2018 IPR037021 RnfH superfamily VEJY3_18906 ef875bdd0551482be2bcfe04fac85c04 87 Pfam PF03658 RnfH family Ubiquitin 1 80 1.2E-31 T 14-10-2018 IPR005346 RnfH protein VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 Gene3D G3DSA:3.20.20.70 2 246 8.1E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 SUPERFAMILY SSF102114 23 220 8.63E-30 T 14-10-2018 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 Pfam PF04055 Radical SAM superfamily 24 178 1.3E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 PIRSF PIRSF000371 44 245 8.5E-45 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 PIRSF PIRSF000371 2 47 2.8E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEJY3_04595 a29c191f04825f90944e58031beb01f8 246 Pfam PF13353 4Fe-4S single cluster domain 16 138 9.0E-21 T 14-10-2018 VEJY3_08190 3061b5c7b189910d90c9b03b2fb79489 288 Gene3D G3DSA:2.40.50.100 43 188 1.4E-41 T 14-10-2018 VEJY3_08190 3061b5c7b189910d90c9b03b2fb79489 288 Gene3D G3DSA:1.10.287.470 76 153 1.4E-41 T 14-10-2018 VEJY3_08190 3061b5c7b189910d90c9b03b2fb79489 288 SUPERFAMILY SSF111369 38 203 9.02E-26 T 14-10-2018 VEJY3_08190 3061b5c7b189910d90c9b03b2fb79489 288 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 236 2.1E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_08190 3061b5c7b189910d90c9b03b2fb79489 288 Gene3D G3DSA:2.40.30.170 189 266 1.4E-41 T 14-10-2018 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Gene3D G3DSA:1.10.1060.10 367 445 6.7E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Pfam PF10531 SLBB domain 296 345 3.9E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.3E-33 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 SUPERFAMILY SSF46548 336 446 6.8E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 758 246.309 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 SUPERFAMILY SSF142019 95 302 1.14E-58 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Gene3D G3DSA:3.40.50.11540 145 290 3.0E-12 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_10925 257668d123c51492b1f20f9a360efb41 793 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 4.4E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_12425 a5ca0acb65cfa4e0231dab54787714af 198 Gene3D G3DSA:2.40.160.20 20 198 1.6E-15 T 14-10-2018 VEJY3_12425 a5ca0acb65cfa4e0231dab54787714af 198 SUPERFAMILY SSF56925 22 198 1.2E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_12425 a5ca0acb65cfa4e0231dab54787714af 198 Pfam PF13505 Outer membrane protein beta-barrel domain 7 198 5.4E-19 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 SUPERFAMILY SSF52540 324 530 8.08E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 SUPERFAMILY SSF90123 17 313 1.83E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 Gene3D G3DSA:3.40.50.300 318 546 8.3E-33 T 14-10-2018 VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 Gene3D G3DSA:1.20.1560.10 9 314 2.5E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 Pfam PF00664 ABC transporter transmembrane region 18 274 4.5E-25 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_18176 88ede913e1c0ea5d338d08639276157d 550 Pfam PF00005 ABC transporter 346 492 8.6E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_01240 70bd270cdf81eeb0de92d78788329657 305 Pfam PF01040 UbiA prenyltransferase family 21 269 4.5E-40 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEJY3_01240 70bd270cdf81eeb0de92d78788329657 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.64 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEJY3_01240 70bd270cdf81eeb0de92d78788329657 305 PIRSF PIRSF005355 1 303 5.5E-86 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 PIRSF PIRSF006188 1 72 8.2E-37 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-31 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 SUPERFAMILY SSF158651 1 75 6.54E-29 T 14-10-2018 IPR023202 YejL-like superfamily VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.309 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEJY3_11045 83c79f5a36b13ebc579e2e9e3691dd63 75 Gene3D G3DSA:1.10.3390.10 1 75 1.1E-32 T 14-10-2018 IPR023202 YejL-like superfamily VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 4.2E-11 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 4.2E-11 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 4.2E-11 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 4.2E-11 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 SMART SM01130 4 289 7.3E-79 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 PIRSF PIRSF001365 1 291 3.0E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 Gene3D G3DSA:3.20.20.70 1 290 2.1E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 Pfam PF00701 Dihydrodipicolinate synthetase family 9 283 1.5E-56 T 14-10-2018 IPR002220 DapA-like GO:0016829 VEJY3_22211 3ab1ffeb88ae1c942349bde307db0871 291 SUPERFAMILY SSF51569 2 282 4.81E-72 T 14-10-2018 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 Pfam PF01380 SIS domain 129 257 5.9E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 SUPERFAMILY SSF53697 95 262 1.14E-35 T 14-10-2018 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 SUPERFAMILY SSF46689 2 74 7.7E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 Gene3D G3DSA:3.40.50.10490 98 272 7.3E-38 T 14-10-2018 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 72 5.4E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEJY3_01745 238ce6a366b7ea52041a061549c419ca 281 Gene3D G3DSA:1.10.10.10 1 76 1.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 SUPERFAMILY SSF55681 74 269 1.08E-58 T 14-10-2018 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 SUPERFAMILY SSF50037 272 318 1.33E-10 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Gene3D G3DSA:1.10.10.10 2 65 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 SUPERFAMILY SSF46785 7 62 2.25E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.518 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Gene3D G3DSA:3.30.930.10 68 271 1.2E-64 T 14-10-2018 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Gene3D G3DSA:2.30.30.100 272 314 3.1E-20 T 14-10-2018 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Pfam PF08279 HTH domain 9 60 2.8E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 2.0E-21 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEJY3_14815 b6850a573be5a6d4b516a91be85c54ce 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.9E-12 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 PIRSF PIRSF005457 1 252 1.3E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 1.0E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 SUPERFAMILY SSF56281 2 252 8.52E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 3.9E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 Gene3D G3DSA:3.60.15.10 1 252 1.7E-92 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 SMART SM00849 12 166 3.2E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_11960 0810477aa8fb2c678def2b21c3945f53 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.35 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEJY3_08805 dd029de5777ef0e52ad82734c59801ff 111 Gene3D G3DSA:3.30.429.10 1 111 5.5E-24 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_08805 dd029de5777ef0e52ad82734c59801ff 111 SUPERFAMILY SSF55331 2 110 1.56E-17 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 SMART SM00967 5 81 3.8E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 Gene3D G3DSA:3.30.1330.30 1 77 4.9E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 7.2E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.142 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 SUPERFAMILY SSF55315 3 77 4.12E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.6E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 SUPERFAMILY SSF75217 69 244 7.85E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_14305 909098082114fb06a8a28f5a7faa6cfb 247 Gene3D G3DSA:3.40.1280.10 78 244 4.8E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 14-10-2018 VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.887 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 Gene3D G3DSA:3.40.1360.10 78 199 1.3E-38 T 14-10-2018 VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 Pfam PF13662 Toprim domain 82 172 7.5E-23 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 Pfam PF02132 RecR protein 41 77 4.1E-16 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 SMART SM00493 81 166 8.0E-17 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_11210 102d84024a73287423ec012f2eb61db6 199 SUPERFAMILY SSF111304 2 199 3.01E-72 T 14-10-2018 IPR023627 Recombination protein RecR VEJY3_15881 60288452a441bbff9d0e899893711dd2 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 3.2E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VEJY3_15881 60288452a441bbff9d0e899893711dd2 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.35 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VEJY3_15881 60288452a441bbff9d0e899893711dd2 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VEJY3_15881 60288452a441bbff9d0e899893711dd2 266 Gene3D G3DSA:3.40.50.1360 1 266 9.7E-118 T 14-10-2018 VEJY3_15881 60288452a441bbff9d0e899893711dd2 266 SUPERFAMILY SSF100950 1 263 1.47E-101 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 SUPERFAMILY SSF55973 3 109 3.53E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Gene3D G3DSA:3.30.300.10 103 372 1.1E-176 T 14-10-2018 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.2E-42 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Gene3D G3DSA:3.30.300.10 5 233 1.1E-176 T 14-10-2018 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Gene3D G3DSA:3.30.300.10 11 270 1.1E-176 T 14-10-2018 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.064 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 SUPERFAMILY SSF55973 233 381 3.88E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 SUPERFAMILY SSF55973 110 232 4.51E-53 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 2.4E-68 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 PIRSF PIRSF000497 1 382 1.3E-174 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_09090 aa9d4ea85ae8e2fcdb6bba71738ba894 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.9E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PIRSF PIRSF000114 10 344 8.5E-96 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 SUPERFAMILY SSF51735 16 190 1.06E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.156 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 SUPERFAMILY SSF48179 191 343 1.36E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.4E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 Gene3D G3DSA:1.10.1040.10 201 345 5.2E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.2E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 Gene3D G3DSA:3.40.50.720 2 199 1.9E-51 T 14-10-2018 VEJY3_14425 63bb267be9cddd4716ef9be9a4d4709d 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 1.3E-45 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 SMART SM01219 1 104 1.0E-53 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 Gene3D G3DSA:3.30.920.10 1 104 9.4E-38 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.92 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 SUPERFAMILY SSF55387 1 103 3.14E-38 T 14-10-2018 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 Pfam PF01491 Frataxin-like domain 1 100 5.7E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_15065 cc06df5b4a582df187cfbe39eaada1c2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_21411 29cdc4b715dc7f8c3713fe3b3a8e28ea 297 Gene3D G3DSA:2.160.20.10 37 291 1.4E-14 T 14-10-2018 IPR012334 Pectin lyase fold VEJY3_21411 29cdc4b715dc7f8c3713fe3b3a8e28ea 297 Pfam PF12541 Protein of unknown function (DUF3737) 17 289 4.2E-120 T 14-10-2018 IPR022208 Protein of unknown function DUF3737 VEJY3_21411 29cdc4b715dc7f8c3713fe3b3a8e28ea 297 SUPERFAMILY SSF51126 104 258 1.5E-15 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor VEJY3_10835 a8fe39da34ce0d9114fc955cf072a15a 424 Pfam PF02308 MgtC family 16 141 9.1E-19 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_10835 a8fe39da34ce0d9114fc955cf072a15a 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 1.3E-65 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 VEJY3_17976 cae404e9e1142fb2c1574db566170dfc 113 Gene3D G3DSA:3.40.50.880 1 113 1.9E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_17976 cae404e9e1142fb2c1574db566170dfc 113 SUPERFAMILY SSF52317 2 111 1.01E-17 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_17976 cae404e9e1142fb2c1574db566170dfc 113 Pfam PF07722 Peptidase C26 2 93 1.6E-20 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 VEJY3_19526 412cdbe586637426640d392e92cd4f89 441 SUPERFAMILY SSF55073 277 435 3.14E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_19526 412cdbe586637426640d392e92cd4f89 441 Pfam PF05228 CHASE4 domain 41 196 2.3E-16 T 14-10-2018 IPR007892 CHASE4 VEJY3_19526 412cdbe586637426640d392e92cd4f89 441 SMART SM00267 261 433 1.0E-52 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19526 412cdbe586637426640d392e92cd4f89 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 429 4.5E-44 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19526 412cdbe586637426640d392e92cd4f89 441 Gene3D G3DSA:3.30.70.270 270 439 2.2E-52 T 14-10-2018 VEJY3_12970 122ccca9d10209f3141c95a24e5a371c 303 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_12970 122ccca9d10209f3141c95a24e5a371c 303 Gene3D G3DSA:3.40.50.300 1 239 2.1E-64 T 14-10-2018 VEJY3_12970 122ccca9d10209f3141c95a24e5a371c 303 SMART SM00382 29 212 4.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12970 122ccca9d10209f3141c95a24e5a371c 303 Pfam PF00005 ABC transporter 20 164 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_12970 122ccca9d10209f3141c95a24e5a371c 303 SUPERFAMILY SSF52540 3 231 2.02E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 Pfam PF07840 FadR C-terminal domain 72 274 1.2E-68 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 SMART SM00345 12 71 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 Gene3D G3DSA:1.20.120.530 80 278 1.8E-32 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 137.329 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_10770 0ad75a3a940506d931bdc3ce693b57e6 279 SUPERFAMILY SSF48008 79 270 9.15E-57 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:3.30.300.20 199 277 2.3E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF69705 1 126 2.88E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF47794 429 492 1.08E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.707 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF54814 279 342 3.84E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.1E-8 T 14-10-2018 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:2.40.50.140 135 198 6.0E-17 T 14-10-2018 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Pfam PF08529 NusA N-terminal domain 4 123 1.7E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:3.30.1480.10 1 129 3.1E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:3.30.300.20 278 345 2.9E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF47794 356 415 5.18E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:1.10.150.20 352 421 1.1E-28 T 14-10-2018 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF54814 201 278 7.85E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SMART SM00316 133 198 9.4E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_12695 5ec6e6bd610b73d8b2a89cb9bfc5a169 495 Gene3D G3DSA:1.10.150.20 431 490 7.9E-25 T 14-10-2018 VEJY3_22206 efe18d1879a757f56e46b9fc08c520e3 332 Gene3D G3DSA:3.40.190.10 33 329 9.9E-56 T 14-10-2018 VEJY3_22206 efe18d1879a757f56e46b9fc08c520e3 332 SUPERFAMILY SSF53850 31 331 1.7E-33 T 14-10-2018 VEJY3_22206 efe18d1879a757f56e46b9fc08c520e3 332 Pfam PF16868 NMT1-like family 38 329 4.2E-34 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEJY3_22206 efe18d1879a757f56e46b9fc08c520e3 332 Gene3D G3DSA:3.40.190.10 118 265 9.9E-56 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 SUPERFAMILY SSF111369 109 166 8.63E-6 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Pfam PF13533 Biotin-lipoyl like 44 88 1.1E-14 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Gene3D G3DSA:2.40.420.20 312 336 5.0E-38 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Gene3D G3DSA:2.40.30.170 38 311 5.0E-38 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 SUPERFAMILY SSF111369 177 252 5.23E-5 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Gene3D G3DSA:1.10.287.470 77 199 5.0E-38 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Pfam PF13437 HlyD family secretion protein 200 272 1.2E-5 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 SUPERFAMILY SSF111369 38 95 4.05E-9 T 14-10-2018 VEJY3_10390 9671a4a7e8d94d1bb70cae2c161bcf5e 354 Gene3D G3DSA:2.40.50.100 43 234 5.0E-38 T 14-10-2018 VEJY3_11090 72640bae53a9e830994274c056a784c2 268 Gene3D G3DSA:3.40.190.10 39 258 7.3E-70 T 14-10-2018 VEJY3_11090 72640bae53a9e830994274c056a784c2 268 SMART SM00062 38 261 5.4E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_11090 72640bae53a9e830994274c056a784c2 268 SUPERFAMILY SSF53850 1 261 8.8E-67 T 14-10-2018 VEJY3_11090 72640bae53a9e830994274c056a784c2 268 Gene3D G3DSA:3.40.190.10 123 220 7.3E-70 T 14-10-2018 VEJY3_11090 72640bae53a9e830994274c056a784c2 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 259 9.5E-60 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_11090 72640bae53a9e830994274c056a784c2 268 SMART SM00079 38 260 0.0069 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEJY3_23331 f20ba64b115bafa257efc4c6bd4e0684 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 2.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_23331 f20ba64b115bafa257efc4c6bd4e0684 310 SUPERFAMILY SSF161098 35 305 2.94E-35 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23331 f20ba64b115bafa257efc4c6bd4e0684 310 Gene3D G3DSA:1.10.3720.10 87 309 2.7E-32 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04125 258abdfddb64e2321168a50fca365a42 997 Gene3D G3DSA:2.60.40.10 778 872 1.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_04125 258abdfddb64e2321168a50fca365a42 997 PIRSF PIRSF036597 3 997 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VEJY3_04125 258abdfddb64e2321168a50fca365a42 997 Pfam PF05547 Immune inhibitor A peptidase M6 173 380 4.4E-15 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VEJY3_04125 258abdfddb64e2321168a50fca365a42 997 ProSitePatterns PS00018 EF-hand calcium-binding domain. 251 263 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VEJY3_04125 258abdfddb64e2321168a50fca365a42 997 SUPERFAMILY SSF55486 289 371 1.51E-6 T 14-10-2018 VEJY3_06400 7a86f2f4c5388bf64474dfc267f7b48f 76 SUPERFAMILY SSF52833 2 71 5.44E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_06400 7a86f2f4c5388bf64474dfc267f7b48f 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEJY3_06400 7a86f2f4c5388bf64474dfc267f7b48f 76 Pfam PF00462 Glutaredoxin 4 60 5.5E-11 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_06400 7a86f2f4c5388bf64474dfc267f7b48f 76 Gene3D G3DSA:3.40.30.10 2 75 1.7E-15 T 14-10-2018 VEJY3_11190 487d6e2501f183f14ed468e55cb768bd 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VEJY3_11190 487d6e2501f183f14ed468e55cb768bd 145 PIRSF PIRSF006173 1 144 4.1E-65 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VEJY3_11190 487d6e2501f183f14ed468e55cb768bd 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.636 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VEJY3_20666 9043ac5f2691f2973d50dbda81c8025a 159 Gene3D G3DSA:1.20.1290.10 1 154 5.3E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_20666 9043ac5f2691f2973d50dbda81c8025a 159 SUPERFAMILY SSF69118 1 155 7.2E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_20666 9043ac5f2691f2973d50dbda81c8025a 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 82 3.9E-6 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 Pfam PF00005 ABC transporter 26 186 3.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 Gene3D G3DSA:3.40.50.300 4 282 5.7E-89 T 14-10-2018 VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 SUPERFAMILY SSF52540 6 257 1.33E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.7E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_00805 d7f22adb70a15ee29442cba310101159 285 SMART SM00382 35 244 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.8E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 SUPERFAMILY SSF51735 123 280 5.68E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 Gene3D G3DSA:3.40.50.720 6 259 6.3E-108 T 14-10-2018 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.8E-69 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 SUPERFAMILY SSF53223 1 122 6.71E-40 T 14-10-2018 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 7.7E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.051 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEJY3_04010 77df36c1495f3b7e9e64c38ac1dac0da 286 Gene3D G3DSA:3.40.50.10860 8 276 6.3E-108 T 14-10-2018 VEJY3_01030 a7ed1825d146acdccc1f7c5a923720eb 371 Pfam PF14897 EpsG family 42 365 1.2E-44 T 14-10-2018 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 SUPERFAMILY SSF56176 8 197 8.72E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 SUPERFAMILY SSF56194 207 341 2.22E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Gene3D G3DSA:3.30.465.10 73 222 1.1E-51 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Gene3D G3DSA:3.90.78.10 223 347 1.2E-41 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 9.1E-32 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Gene3D G3DSA:3.30.43.10 1 71 2.2E-23 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Pfam PF01565 FAD binding domain 23 144 5.0E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEJY3_14820 db78c4173f4664dd38fa89b8f24a4b88 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 81.603 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 3.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 3.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00941 Cadmium-transporting ATPase signature 246 266 3.0E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 675 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 594 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 691 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 615 6.4E-27 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Gene3D G3DSA:2.70.150.20 261 366 2.3E-31 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Gene3D G3DSA:3.40.50.1000 443 708 1.6E-80 T 14-10-2018 IPR023214 HAD superfamily VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Pfam PF00403 Heavy-metal-associated domain 76 130 6.3E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 SUPERFAMILY SSF55008 73 135 1.1E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 SUPERFAMILY SSF56784 461 756 7.73E-50 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Gene3D G3DSA:3.30.70.100 71 136 2.8E-11 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Pfam PF00122 E1-E2 ATPase 262 442 1.0E-49 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 SUPERFAMILY SSF81665 214 741 2.62E-20 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Gene3D G3DSA:3.40.1110.10 473 590 1.6E-80 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 668 2.5E-36 T 14-10-2018 VEJY3_04445 50acfa0305c84620797e85c8919d0960 766 SUPERFAMILY SSF81653 264 361 5.62E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 SUPERFAMILY SSF51569 3 275 1.41E-66 T 14-10-2018 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 Gene3D G3DSA:3.20.20.70 1 268 1.9E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 336 7.0E-27 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 SUPERFAMILY SSF89000 288 336 1.37E-19 T 14-10-2018 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 Gene3D G3DSA:1.10.8.60 275 337 7.9E-34 T 14-10-2018 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 Pfam PF07836 DmpG-like communication domain 274 334 4.9E-32 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 337 220.201 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 VEJY3_06805 5b76c5272ae17c336fdc60335f4c54c4 337 Pfam PF00682 HMGL-like 6 264 6.0E-74 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_06495 f7885173cde5431b64e6b43822abc5c5 376 Pfam PF04209 homogentisate 1,2-dioxygenase 83 374 1.0E-22 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VEJY3_06495 f7885173cde5431b64e6b43822abc5c5 376 SUPERFAMILY SSF51182 57 374 6.48E-92 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_06495 f7885173cde5431b64e6b43822abc5c5 376 Gene3D G3DSA:2.60.120.10 65 167 2.1E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_17411 75c93533fa7e657e18d06b9873b18b78 199 Pfam PF01323 DSBA-like thioredoxin domain 40 180 4.7E-21 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEJY3_17411 75c93533fa7e657e18d06b9873b18b78 199 Gene3D G3DSA:3.40.30.10 17 199 1.5E-52 T 14-10-2018 VEJY3_17411 75c93533fa7e657e18d06b9873b18b78 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_17411 75c93533fa7e657e18d06b9873b18b78 199 PIRSF PIRSF001488 1 199 1.3E-63 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VEJY3_17411 75c93533fa7e657e18d06b9873b18b78 199 SUPERFAMILY SSF52833 20 197 1.01E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 SUPERFAMILY SSF49303 219 326 1.35E-15 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Gene3D G3DSA:2.60.120.260 33 198 4.1E-40 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Gene3D G3DSA:2.60.40.10 735 831 3.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Pfam PF00703 Glycosyl hydrolases family 2 223 327 1.9E-15 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 335 477 8.6E-14 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Gene3D G3DSA:3.20.20.80 330 626 2.1E-43 T 14-10-2018 VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 SUPERFAMILY SSF49785 34 199 2.98E-44 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 SUPERFAMILY SSF51445 324 624 8.29E-46 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 90 198 3.2E-19 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_24051 444593c836606a2eeed53b87e985c9dd 902 Gene3D G3DSA:2.60.40.10 216 327 2.5E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 Gene3D G3DSA:3.30.70.260 318 461 3.5E-8 T 14-10-2018 VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 Pfam PF00696 Amino acid kinase family 4 293 6.4E-23 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 SUPERFAMILY SSF53633 5 306 6.55E-55 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 Gene3D G3DSA:3.30.70.260 325 394 3.5E-8 T 14-10-2018 VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 SUPERFAMILY SSF55021 398 463 5.57E-9 T 14-10-2018 VEJY3_07975 650a452f81e499c24ee7e8e267791746 474 Gene3D G3DSA:3.40.1160.10 3 306 1.3E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_13985 ba27b1d841da8057bf59e7fee2c43acc 139 SUPERFAMILY SSF111038 1 139 5.1E-49 T 14-10-2018 IPR035917 YjbQ-like superfamily VEJY3_13985 ba27b1d841da8057bf59e7fee2c43acc 139 PIRSF PIRSF004681 1 139 1.3E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEJY3_13985 ba27b1d841da8057bf59e7fee2c43acc 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 4.0E-39 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEJY3_13985 ba27b1d841da8057bf59e7fee2c43acc 139 Gene3D G3DSA:2.60.120.460 2 139 5.3E-42 T 14-10-2018 IPR035917 YjbQ-like superfamily VEJY3_13985 ba27b1d841da8057bf59e7fee2c43acc 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEJY3_20476 304402010c19ed1f74cd854ef4b1a7fb 176 Pfam PF13563 2'-5' RNA ligase superfamily 34 135 1.1E-10 T 14-10-2018 VEJY3_20476 304402010c19ed1f74cd854ef4b1a7fb 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 173 18.905 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 VEJY3_20476 304402010c19ed1f74cd854ef4b1a7fb 176 Gene3D G3DSA:3.90.1140.10 1 172 1.7E-36 T 14-10-2018 VEJY3_20476 304402010c19ed1f74cd854ef4b1a7fb 176 SUPERFAMILY SSF55144 1 170 6.28E-31 T 14-10-2018 IPR009097 Cyclic phosphodiesterase VEJY3_14250 9003be692855fdaf265e89797c59b74d 335 PIRSF PIRSF005211 1 335 7.0E-105 T 14-10-2018 IPR012020 AB hydrolase 4 family VEJY3_14250 9003be692855fdaf265e89797c59b74d 335 Gene3D G3DSA:3.40.50.1820 34 312 3.4E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_14250 9003be692855fdaf265e89797c59b74d 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 3.5E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_14250 9003be692855fdaf265e89797c59b74d 335 SUPERFAMILY SSF53474 32 299 6.08E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_14250 9003be692855fdaf265e89797c59b74d 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site VEJY3_23351 24db08d4bf4a191e6f4398fc4b4f4447 81 Gene3D G3DSA:1.20.5.190 25 80 2.3E-15 T 14-10-2018 VEJY3_23351 24db08d4bf4a191e6f4398fc4b4f4447 81 Pfam PF04728 Lipoprotein leucine-zipper 29 81 1.3E-23 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VEJY3_23351 24db08d4bf4a191e6f4398fc4b4f4447 81 PIRSF PIRSF002855 1 81 3.9E-31 T 14-10-2018 IPR016367 Murein-lipoprotein VEJY3_23351 24db08d4bf4a191e6f4398fc4b4f4447 81 SUPERFAMILY SSF58042 26 80 1.83E-16 T 14-10-2018 VEJY3_06465 90f1cb93ee1164b7bbb86c6054c1a926 256 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06465 90f1cb93ee1164b7bbb86c6054c1a926 256 SUPERFAMILY SSF52540 2 227 2.39E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06465 90f1cb93ee1164b7bbb86c6054c1a926 256 Pfam PF00005 ABC transporter 19 164 8.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06465 90f1cb93ee1164b7bbb86c6054c1a926 256 Gene3D G3DSA:3.40.50.300 1 250 8.9E-63 T 14-10-2018 VEJY3_06465 90f1cb93ee1164b7bbb86c6054c1a926 256 SMART SM00382 27 214 7.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_22651 03524ec99ad1c99ac11d29e4bf9b403e 211 Gene3D G3DSA:3.40.50.10610 33 209 9.0E-12 T 14-10-2018 VEJY3_22651 03524ec99ad1c99ac11d29e4bf9b403e 211 SUPERFAMILY SSF159594 49 208 1.46E-21 T 14-10-2018 VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 SUPERFAMILY SSF52335 3 147 3.21E-53 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 31.335 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 PIRSF PIRSF006614 8 151 1.1E-61 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 Gene3D G3DSA:3.40.50.1380 1 151 9.8E-63 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 Pfam PF02142 MGS-like domain 33 118 1.6E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_08580 56e3907dda09ce54afd8235837337d18 151 SMART SM00851 25 118 1.4E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 2.0E-33 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 Pfam PF12833 Helix-turn-helix domain 261 338 5.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 Gene3D G3DSA:1.10.10.60 237 345 2.8E-28 T 14-10-2018 VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 SUPERFAMILY SSF46689 290 339 2.55E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 8.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 8.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_04825 27db89cf3ba99952118ccb9baa9f928f 347 SMART SM00342 255 337 4.7E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Gene3D G3DSA:2.20.28.10 1 56 1.9E-25 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Gene3D G3DSA:3.30.390.120 403 465 2.0E-17 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-6 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-6 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 359 366 1.0E-14 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 93 115 1.0E-14 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 334 1.0E-14 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 258 1.0E-14 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 94 372 6.0E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Gene3D G3DSA:3.50.50.60 197 331 4.6E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Pfam PF00301 Rubredoxin 3 49 1.3E-20 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 SUPERFAMILY SSF57802 1 56 3.87E-21 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 1.5E-22 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 344 366 1.5E-22 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 319 335 1.5E-22 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 94 113 1.5E-22 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 251 1.5E-22 T 14-10-2018 VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 Gene3D G3DSA:3.50.50.60 95 367 4.6E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23206 d7fe73cd07516d227660e1f192dbe325 474 SUPERFAMILY SSF51905 93 369 9.12E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 4.2E-29 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 SMART SM00936 283 373 1.6E-38 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 SUPERFAMILY SSF56601 11 283 3.26E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 1.3E-93 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 Gene3D G3DSA:2.60.410.10 283 373 7.8E-31 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEJY3_03305 36b1f1556b0eaba5430b684cb2bfb484 392 Gene3D G3DSA:3.40.710.10 27 282 1.1E-88 T 14-10-2018 VEJY3_18481 ccd7ab6067dc3ccbdebaf9bf6312bba3 239 SUPERFAMILY SSF161098 10 207 4.32E-37 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18481 ccd7ab6067dc3ccbdebaf9bf6312bba3 239 Gene3D G3DSA:1.10.3720.10 2 223 4.4E-44 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18481 ccd7ab6067dc3ccbdebaf9bf6312bba3 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 212 1.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 Gene3D G3DSA:3.20.20.120 99 300 2.9E-115 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 SUPERFAMILY SSF51604 102 318 1.97E-46 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 SUPERFAMILY SSF54826 1 100 1.8E-24 T 14-10-2018 VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.94 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 Gene3D G3DSA:3.30.390.10 4 306 2.9E-115 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 Pfam PF13378 Enolase C-terminal domain-like 125 277 1.4E-11 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VEJY3_04280 b13863fb82f27db1c284b6a729f2661b 329 SMART SM00922 116 213 3.2E-4 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEJY3_10880 9ee946fdf0c4f75da85a433192dc7aa1 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.017 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10880 9ee946fdf0c4f75da85a433192dc7aa1 159 Gene3D G3DSA:3.30.70.640 1 159 6.3E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10880 9ee946fdf0c4f75da85a433192dc7aa1 159 Pfam PF01967 MoaC family 15 150 7.7E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10880 9ee946fdf0c4f75da85a433192dc7aa1 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.0E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_10880 9ee946fdf0c4f75da85a433192dc7aa1 159 SUPERFAMILY SSF55040 11 155 1.57E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_18826 56023786f0a64f43cde2ac4418c58c3c 338 Gene3D G3DSA:3.40.190.170 26 338 1.3E-102 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_18826 56023786f0a64f43cde2ac4418c58c3c 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 315 1.2E-45 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 SUPERFAMILY SSF52374 6 316 1.6E-97 T 14-10-2018 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 Gene3D G3DSA:1.10.240.10 218 325 4.6E-34 T 14-10-2018 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 Gene3D G3DSA:3.10.290.10 326 394 3.1E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 Gene3D G3DSA:3.40.50.620 5 217 8.9E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.329 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 SUPERFAMILY SSF55174 297 394 6.33E-16 T 14-10-2018 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 2.8E-78 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 SMART SM00363 334 393 0.0016 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_12765 0db1d9a9279f64099e3f7b27101f618b 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_00440 61bfea796e3d4a40a9c15a072eb9d960 211 Gene3D G3DSA:3.30.1050.10 7 117 9.0E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEJY3_00440 61bfea796e3d4a40a9c15a072eb9d960 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.7E-23 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VEJY3_00440 61bfea796e3d4a40a9c15a072eb9d960 211 SUPERFAMILY SSF55718 15 117 1.6E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEJY3_08990 640769bc024db5c7b1272379ba437728 111 Gene3D G3DSA:3.40.50.2300 1 111 5.1E-40 T 14-10-2018 VEJY3_08990 640769bc024db5c7b1272379ba437728 111 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 7.3E-19 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_08990 640769bc024db5c7b1272379ba437728 111 SUPERFAMILY SSF52794 2 98 9.07E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_04165 c1646e8de2b1f385abd4f2f4ae9ec873 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 4.4E-105 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_04165 c1646e8de2b1f385abd4f2f4ae9ec873 332 PIRSF PIRSF006470 1 332 9.8E-122 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEJY3_04165 c1646e8de2b1f385abd4f2f4ae9ec873 332 Gene3D G3DSA:3.40.190.170 27 329 1.0E-91 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_03900 7863dad936b285f75f32508b350128c9 758 Pfam PF02421 Ferrous iron transport protein B 4 160 2.8E-58 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 Pfam PF07670 Nucleoside recognition 509 690 8.5E-37 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 Pfam PF07670 Nucleoside recognition 349 441 5.1E-14 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 4.7E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 Gene3D G3DSA:3.40.50.300 3 202 6.8E-44 T 14-10-2018 VEJY3_03900 7863dad936b285f75f32508b350128c9 758 SUPERFAMILY SSF52540 4 181 7.48E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 Gene3D G3DSA:1.25.40.10 284 386 4.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SUPERFAMILY SSF48452 210 384 1.37E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 Gene3D G3DSA:1.25.40.10 31 174 8.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 Gene3D G3DSA:1.25.40.10 175 283 7.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 Pfam PF13181 Tetratricopeptide repeat 147 177 0.0047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SMART SM00028 147 180 1.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SMART SM00028 287 320 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SMART SM00028 70 103 0.31 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SMART SM00028 356 388 480.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_00755 6a5244ea27ddd82cbf4ec93cd6092a5b 403 SUPERFAMILY SSF48452 43 245 2.66E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_14395 5b7eb4d8bd162b354954fcd5f96efe12 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.928 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VEJY3_14395 5b7eb4d8bd162b354954fcd5f96efe12 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 4.0E-62 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VEJY3_02625 ebfd17ebc45ce51fb930e06d7e9ff843 735 SUPERFAMILY SSF161098 415 531 4.84E-8 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02625 ebfd17ebc45ce51fb930e06d7e9ff843 735 Gene3D G3DSA:1.10.3720.10 497 732 2.2E-23 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02625 ebfd17ebc45ce51fb930e06d7e9ff843 735 SUPERFAMILY SSF50978 78 376 6.87E-5 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 VEJY3_02625 ebfd17ebc45ce51fb930e06d7e9ff843 735 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 453 729 7.3E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_02625 ebfd17ebc45ce51fb930e06d7e9ff843 735 SUPERFAMILY SSF161098 506 721 1.13E-19 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 SUPERFAMILY SSF46785 52 121 8.13E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 Pfam PF01614 Bacterial transcriptional regulator 168 290 9.0E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 SUPERFAMILY SSF55781 114 293 4.32E-46 T 14-10-2018 VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 SMART SM00346 50 138 1.4E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 Gene3D G3DSA:1.10.10.10 36 116 4.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 Pfam PF09339 IclR helix-turn-helix domain 54 103 5.6E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 Gene3D G3DSA:3.30.450.40 117 294 3.1E-54 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_17866 2d850fe28e07b4f0b30a56ee1d417069 294 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 47 291 5.3E-90 T 14-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 VEJY3_17261 372024e7960344890afd943f8405c5dd 253 Gene3D G3DSA:3.40.50.720 1 249 1.4E-66 T 14-10-2018 VEJY3_17261 372024e7960344890afd943f8405c5dd 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 3.5E-52 T 14-10-2018 VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17261 372024e7960344890afd943f8405c5dd 253 SUPERFAMILY SSF51735 5 244 7.21E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17261 372024e7960344890afd943f8405c5dd 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SUPERFAMILY SSF53098 322 469 7.59E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Pfam PF09371 Tex-like protein N-terminal domain 9 192 4.6E-71 T 14-10-2018 IPR018974 Tex-like protein, N-terminal VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Pfam PF00575 S1 RNA binding domain 649 720 2.1E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SUPERFAMILY SSF47781 470 557 8.67E-27 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Gene3D G3DSA:1.10.10.650 2 109 1.2E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SUPERFAMILY SSF158832 3 321 4.97E-120 T 14-10-2018 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Gene3D G3DSA:1.10.150.310 499 630 1.7E-49 T 14-10-2018 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SMART SM00732 326 424 2.5E-37 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Gene3D G3DSA:3.30.420.140 325 451 8.6E-157 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 5.1E-27 T 14-10-2018 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Gene3D G3DSA:1.10.3500.10 112 498 8.6E-157 T 14-10-2018 IPR023323 Tex-like domain superfamily VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Pfam PF16921 Tex protein YqgF-like domain 327 451 2.3E-55 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SMART SM00316 649 720 4.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SUPERFAMILY SSF50249 642 720 3.66E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_00695 c964be5389e916a48eff695eb267a916 776 SUPERFAMILY SSF47781 560 632 3.11E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_00695 c964be5389e916a48eff695eb267a916 776 Gene3D G3DSA:2.40.50.140 631 725 1.6E-28 T 14-10-2018 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 SUPERFAMILY SSF52518 358 545 2.32E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 SUPERFAMILY SSF52518 1 175 3.73E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 4.1E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Gene3D G3DSA:3.40.50.970 1 177 7.1E-66 T 14-10-2018 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.4E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Gene3D G3DSA:3.40.50.1220 181 349 2.2E-52 T 14-10-2018 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 SUPERFAMILY SSF52467 182 341 1.56E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.1E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEJY3_15400 934a19c36cf9fbf4f1635da83baa7050 548 Gene3D G3DSA:3.40.50.970 350 548 7.7E-66 T 14-10-2018 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Gene3D G3DSA:3.30.379.10 223 349 7.3E-25 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Gene3D G3DSA:2.60.40.10 823 886 6.1E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 SUPERFAMILY SSF55545 228 352 1.7E-20 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Pfam PF03173 Putative carbohydrate binding domain 45 208 2.0E-43 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Gene3D G3DSA:3.20.20.80 351 822 2.8E-156 T 14-10-2018 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 353 761 1.3E-98 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 SUPERFAMILY SSF81296 794 883 2.24E-27 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 809 883 5.0E-24 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Gene3D G3DSA:2.60.40.290 34 170 3.0E-40 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 SUPERFAMILY SSF49384 35 213 3.14E-44 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 SUPERFAMILY SSF51445 353 771 1.32E-131 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 229 346 3.2E-17 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 SMART SM01081 43 210 1.8E-44 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 347 364 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 725 741 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 333 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 743 760 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 376 397 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 453 470 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 519 537 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_08535 aff10f7b4d969eba1a9c569acd894dd8 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 546 559 3.1E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.172 T 14-10-2018 IPR026593 Protein translocase subunit SecY VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 Gene3D G3DSA:1.10.3370.10 10 430 1.1E-159 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 Pfam PF00344 SecY translocase 76 418 1.3E-117 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 SUPERFAMILY SSF103491 15 425 7.19E-131 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_01380 2a347ee340f1f0d5e66672fdc5a54d52 444 PIRSF PIRSF004557 10 442 4.0E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_05700 ad06d9438142c2ace127559d5c3f9029 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 292 2.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_05700 ad06d9438142c2ace127559d5c3f9029 295 Gene3D G3DSA:1.10.3720.10 86 292 3.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_05700 ad06d9438142c2ace127559d5c3f9029 295 SUPERFAMILY SSF161098 90 276 7.06E-22 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_05700 ad06d9438142c2ace127559d5c3f9029 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.4E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEJY3_10330 b707af385166287e37811c70cf3d084a 128 PIRSF PIRSF007010 1 128 1.7E-50 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VEJY3_10330 b707af385166287e37811c70cf3d084a 128 Gene3D G3DSA:3.30.300.250 18 128 2.2E-41 T 14-10-2018 VEJY3_10330 b707af385166287e37811c70cf3d084a 128 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 1.5E-45 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 Pfam PF00547 Urease, gamma subunit 1 99 5.2E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-38 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 SUPERFAMILY SSF54111 1 99 3.27E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.311 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 PIRSF PIRSF001223 1 100 1.1E-49 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06870 6b4ccd554b9278cb2038c97a5b77b19b 100 Gene3D G3DSA:3.30.280.10 1 100 3.4E-47 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 Gene3D G3DSA:3.40.190.10 93 295 2.2E-68 T 14-10-2018 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 Gene3D G3DSA:3.40.190.10 172 271 2.2E-68 T 14-10-2018 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 Gene3D G3DSA:1.10.10.10 3 90 8.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 Pfam PF03466 LysR substrate binding domain 100 299 3.6E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 SUPERFAMILY SSF53850 92 298 1.09E-40 T 14-10-2018 VEJY3_00125 24a209171ab23f6ae60dcd61cdddc186 313 SUPERFAMILY SSF46785 7 88 2.24E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 2.2E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 2.2E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.2E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.2E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.2E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 1.2E-38 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 Gene3D G3DSA:3.40.50.2300 1 147 1.0E-50 T 14-10-2018 VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 SMART SM00226 3 145 2.7E-54 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEJY3_01075 3a50d5cfe9f25b5bfe3bd716a37cde24 147 SUPERFAMILY SSF52788 1 146 4.32E-42 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VEJY3_15210 1b914937d410ad4e7b88a3e296a43a7f 397 SUPERFAMILY SSF103473 8 384 2.49E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_15210 1b914937d410ad4e7b88a3e296a43a7f 397 Pfam PF07690 Major Facilitator Superfamily 16 352 1.1E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_15210 1b914937d410ad4e7b88a3e296a43a7f 397 Gene3D G3DSA:1.20.1720.10 12 385 1.4E-87 T 14-10-2018 VEJY3_15210 1b914937d410ad4e7b88a3e296a43a7f 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_16126 e53d961163ae860d3f5e220ee457a340 615 SUPERFAMILY SSF55486 4 550 5.62E-75 T 14-10-2018 VEJY3_16126 e53d961163ae860d3f5e220ee457a340 615 Pfam PF01432 Peptidase family M3 146 237 7.3E-5 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEJY3_16126 e53d961163ae860d3f5e220ee457a340 615 Pfam PF01432 Peptidase family M3 285 490 7.9E-17 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEJY3_16126 e53d961163ae860d3f5e220ee457a340 615 Gene3D G3DSA:1.10.1370.20 320 499 9.7E-11 T 14-10-2018 VEJY3_16126 e53d961163ae860d3f5e220ee457a340 615 Gene3D G3DSA:1.10.1370.30 29 307 7.4E-11 T 14-10-2018 VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 Pfam PF00381 PTS HPr component phosphorylation site 291 370 3.9E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 Gene3D G3DSA:3.30.1340.10 289 375 4.4E-28 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 6.0E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 SUPERFAMILY SSF55804 145 276 5.36E-20 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 Gene3D G3DSA:3.40.930.10 1 142 2.0E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 Gene3D G3DSA:3.40.930.10 143 275 7.1E-7 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 SUPERFAMILY SSF55594 291 376 2.36E-24 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 SUPERFAMILY SSF55804 4 140 1.7E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 4.7E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 4.7E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_20161 b15fcef98c11f65ef7e63525af334eff 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 4.7E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 98 733 41.01 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 635 732 7.6E-17 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 SUPERFAMILY SSF51011 630 732 3.33E-28 T 14-10-2018 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Gene3D G3DSA:2.60.40.1180 630 733 2.2E-30 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Gene3D G3DSA:3.20.20.80 231 629 9.6E-159 T 14-10-2018 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 SMART SM00642 257 602 7.8E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Pfam PF00128 Alpha amylase, catalytic domain 283 355 2.4E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 PIRSF PIRSF000463 16 734 6.7E-280 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 SUPERFAMILY SSF51445 179 623 3.86E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 SUPERFAMILY SSF81296 28 111 1.19E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 140 213 2.0E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEJY3_23701 ce6da1d791b692a2e2585660adc80c6c 734 Gene3D G3DSA:2.60.40.10 13 227 2.8E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 Gene3D G3DSA:3.50.30.80 418 562 1.2E-48 T 14-10-2018 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 Pfam PF00920 Dehydratase family 67 594 5.2E-150 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.447 T 14-10-2018 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 SUPERFAMILY SSF52016 418 596 6.59E-53 T 14-10-2018 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_00240 4b6cde511fb38d487bf737f719b42e22 598 SUPERFAMILY SSF143975 3 417 4.05E-132 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_01580 4f78aad64a90e2f847733018d344e96f 322 Pfam PF16868 NMT1-like family 30 319 4.3E-95 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEJY3_01580 4f78aad64a90e2f847733018d344e96f 322 SUPERFAMILY SSF53850 25 321 5.89E-89 T 14-10-2018 VEJY3_01580 4f78aad64a90e2f847733018d344e96f 322 Gene3D G3DSA:3.40.190.10 117 255 2.6E-109 T 14-10-2018 VEJY3_01580 4f78aad64a90e2f847733018d344e96f 322 Gene3D G3DSA:3.40.190.10 30 319 2.6E-109 T 14-10-2018 VEJY3_11465 03622c136ef17fe6d4a4202451beebab 346 PIRSF PIRSF020479 5 346 6.8E-117 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VEJY3_11465 03622c136ef17fe6d4a4202451beebab 346 SUPERFAMILY SSF50341 199 336 1.96E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEJY3_11465 03622c136ef17fe6d4a4202451beebab 346 Pfam PF01584 CheW-like domain 203 335 5.6E-13 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_11465 03622c136ef17fe6d4a4202451beebab 346 SMART SM00260 199 333 0.0055 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_11665 aecafb5585fe99d83988d601dff825d3 95 Gene3D G3DSA:1.10.10.10 2 95 7.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11665 aecafb5585fe99d83988d601dff825d3 95 Pfam PF09904 Winged helix-turn helix 4 91 6.9E-38 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VEJY3_11665 aecafb5585fe99d83988d601dff825d3 95 PIRSF PIRSF037266 1 94 1.1E-41 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VEJY3_13930 a9f76739a91b7102bd390fedbcd633f6 284 Pfam PF13358 DDE superfamily endonuclease 154 282 1.1E-25 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VEJY3_13930 a9f76739a91b7102bd390fedbcd633f6 284 Pfam PF13551 Winged helix-turn helix 4 63 7.2E-13 T 14-10-2018 VEJY3_13930 a9f76739a91b7102bd390fedbcd633f6 284 Pfam PF13592 Winged helix-turn helix 79 135 2.6E-16 T 14-10-2018 IPR025959 Winged helix-turn helix domain VEJY3_13930 a9f76739a91b7102bd390fedbcd633f6 284 SUPERFAMILY SSF46689 2 112 1.97E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_13930 a9f76739a91b7102bd390fedbcd633f6 284 Gene3D G3DSA:3.30.420.470 117 284 4.2E-12 T 14-10-2018 VEJY3_01235 4aa5905f1c7873d51811a4f132ca00f8 180 Gene3D G3DSA:3.50.30.40 1 161 4.3E-61 T 14-10-2018 VEJY3_01235 4aa5905f1c7873d51811a4f132ca00f8 180 SUPERFAMILY SSF89562 2 158 6.54E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VEJY3_01235 4aa5905f1c7873d51811a4f132ca00f8 180 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.646 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VEJY3_01235 4aa5905f1c7873d51811a4f132ca00f8 180 Pfam PF03737 Aldolase/RraA 6 152 1.6E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 Pfam PF00171 Aldehyde dehydrogenase family 39 493 2.0E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 Gene3D G3DSA:3.40.309.10 278 467 1.7E-168 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 Gene3D G3DSA:3.40.605.10 38 489 1.7E-168 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_17211 123bb8e1f7133f907e0674eb4b0c6f8d 506 SUPERFAMILY SSF53720 26 500 3.53E-159 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_13000 40928e930488094645e74772c8789bd9 633 SUPERFAMILY SSF51230 104 195 1.7E-22 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_13000 40928e930488094645e74772c8789bd9 633 Gene3D G3DSA:3.30.559.10 386 633 9.0E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 402 632 7.0E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 SUPERFAMILY SSF51230 208 300 1.57E-23 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_13000 40928e930488094645e74772c8789bd9 633 SUPERFAMILY SSF51230 1 94 6.81E-24 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_13000 40928e930488094645e74772c8789bd9 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 231 260 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Gene3D G3DSA:4.10.320.10 327 372 8.9E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Pfam PF02817 e3 binding domain 328 362 3.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 SUPERFAMILY SSF47005 322 366 9.68E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Pfam PF00364 Biotin-requiring enzyme 209 279 2.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_13000 40928e930488094645e74772c8789bd9 633 Pfam PF00364 Biotin-requiring enzyme 105 175 3.4E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_13000 40928e930488094645e74772c8789bd9 633 Pfam PF00364 Biotin-requiring enzyme 4 73 4.6E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_13000 40928e930488094645e74772c8789bd9 633 SUPERFAMILY SSF52777 391 632 2.85E-81 T 14-10-2018 VEJY3_13000 40928e930488094645e74772c8789bd9 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Gene3D G3DSA:2.40.50.100 1 80 8.5E-22 T 14-10-2018 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Gene3D G3DSA:2.40.50.100 104 181 1.1E-19 T 14-10-2018 VEJY3_13000 40928e930488094645e74772c8789bd9 633 Gene3D G3DSA:2.40.50.100 207 285 1.6E-20 T 14-10-2018 VEJY3_00600 35ff3051aa7f47a0cc72f36f11963826 128 PIRSF PIRSF016821 5 128 3.9E-42 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VEJY3_00600 35ff3051aa7f47a0cc72f36f11963826 128 Gene3D G3DSA:3.10.290.10 2 107 1.8E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_00600 35ff3051aa7f47a0cc72f36f11963826 128 SUPERFAMILY SSF55174 8 105 1.2E-29 T 14-10-2018 VEJY3_00600 35ff3051aa7f47a0cc72f36f11963826 128 SMART SM00363 8 70 2.0E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_00600 35ff3051aa7f47a0cc72f36f11963826 128 Pfam PF01479 S4 domain 8 54 2.1E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.0E-94 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Gene3D G3DSA:1.10.274.10 190 314 6.5E-58 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 SMART SM00065 17 163 1.3E-22 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 SUPERFAMILY SSF52009 293 412 1.83E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 SUPERFAMILY SSF55781 2 158 2.4E-31 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 SUPERFAMILY SSF47831 203 311 5.75E-27 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Gene3D G3DSA:3.30.450.40 1 161 1.4E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.3E-22 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.3E-22 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.3E-22 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.3E-22 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 7.4E-138 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Gene3D G3DSA:3.50.30.10 173 399 6.5E-58 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 2.7E-22 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Gene3D G3DSA:3.20.20.60 400 739 3.7E-104 T 14-10-2018 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 1.2E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 SUPERFAMILY SSF51621 423 714 3.14E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_02355 9b30625119447cbe89df58564ba6dd51 748 Pfam PF01590 GAF domain 17 152 5.3E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 22 243 2.4E-50 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 Gene3D G3DSA:3.20.20.70 274 589 9.1E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PIRSF PIRSF005536 1 700 3.3E-223 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 Pfam PF02065 Melibiase 254 591 2.1E-118 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 SUPERFAMILY SSF51445 289 613 5.27E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 1.7E-54 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_09535 776694db5fe9c936d6316f8a6562f392 700 Gene3D G3DSA:2.70.98.60 1 273 2.8E-55 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Gene3D G3DSA:3.10.580.10 144 282 7.8E-33 T 14-10-2018 VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Gene3D G3DSA:2.60.120.10 2 135 2.6E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 SMART SM00100 17 134 1.3E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 SUPERFAMILY SSF54631 146 279 1.52E-27 T 14-10-2018 VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 SMART SM00116 233 280 5.9E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 SMART SM00116 159 216 1.5E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.3E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 4.7E-47 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Pfam PF00571 CBS domain 152 214 2.2E-7 T 14-10-2018 IPR000644 CBS domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Pfam PF00571 CBS domain 226 278 1.1E-10 T 14-10-2018 IPR000644 CBS domain VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 SUPERFAMILY SSF51206 7 133 9.95E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_10025 ef854a3abf4102a24f41f7223cd5b8f5 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 1.2E-46 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 SUPERFAMILY SSF52025 788 895 1.57E-8 T 14-10-2018 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 Gene3D G3DSA:3.40.630.10 750 770 1.4E-10 T 14-10-2018 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 429 439 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 Gene3D G3DSA:3.50.30.30 771 893 1.4E-10 T 14-10-2018 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 SUPERFAMILY SSF52743 208 486 1.7E-68 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 Gene3D G3DSA:3.40.50.200 205 488 3.4E-79 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 240 4.6E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 PRINTS PR00723 Subtilisin serine protease family (S8) signature 428 444 4.6E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 PRINTS PR00723 Subtilisin serine protease family (S8) signature 259 272 4.6E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 Pfam PF02225 PA domain 799 880 1.5E-5 T 14-10-2018 IPR003137 PA domain VEJY3_20456 7eb33705db2f3e364a2567d0c08a4b50 1258 Pfam PF00082 Subtilase family 221 477 2.7E-51 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 Gene3D G3DSA:3.30.300.70 1 80 8.7E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 SUPERFAMILY SSF74942 84 151 1.19E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 Pfam PF02576 RimP N-terminal domain 12 83 1.7E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 2.1E-21 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VEJY3_12700 25b9e12ed2d0a1611abccdc3bed28d78 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.71 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Gene3D G3DSA:3.30.450.20 327 437 2.5E-11 T 14-10-2018 VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 SUPERFAMILY SSF141868 624 876 7.32E-79 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Gene3D G3DSA:3.20.20.450 621 875 1.8E-82 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Pfam PF00563 EAL domain 624 863 9.1E-69 T 14-10-2018 IPR001633 EAL domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Pfam PF00990 Diguanylate cyclase, GGDEF domain 452 575 2.2E-13 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Gene3D G3DSA:3.30.70.270 438 606 1.3E-16 T 14-10-2018 VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 448 558 3.0E-10 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 SMART SM00267 440 608 2.2E-7 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 SMART SM00052 618 868 7.8E-88 T 14-10-2018 IPR001633 EAL domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 327 446 6.7E-8 T 14-10-2018 IPR000014 PAS domain VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 Pfam PF05228 CHASE4 domain 37 187 9.6E-26 T 14-10-2018 IPR007892 CHASE4 VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 SUPERFAMILY SSF55073 457 590 6.98E-14 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_18626 67317b8e42ace5fec68f195feb80752a 882 SUPERFAMILY SSF55785 321 437 6.47E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_03240 ead75de9dc80af1bb73ec9e28618bfee 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.5E-114 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VEJY3_03240 ead75de9dc80af1bb73ec9e28618bfee 258 PIRSF PIRSF029037 1 258 1.4E-116 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VEJY3_11160 80ac610d3c66bf51f199a4636918f32a 294 Gene3D G3DSA:2.70.98.10 2 294 2.3E-87 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_11160 80ac610d3c66bf51f199a4636918f32a 294 Pfam PF01263 Aldose 1-epimerase 26 291 7.7E-53 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEJY3_11160 80ac610d3c66bf51f199a4636918f32a 294 SUPERFAMILY SSF74650 7 289 5.02E-76 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_11160 80ac610d3c66bf51f199a4636918f32a 294 PIRSF PIRSF016020 3 294 2.8E-65 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SUPERFAMILY SSF48403 37 372 1.66E-69 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 Pfam PF12796 Ankyrin repeats (3 copies) 107 190 8.5E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 Pfam PF12796 Ankyrin repeats (3 copies) 202 292 4.9E-13 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 Gene3D G3DSA:1.25.40.20 1 382 3.3E-87 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 PRINTS PR01415 Ankyrin repeat signature 133 148 3.1E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 PRINTS PR01415 Ankyrin repeat signature 278 292 3.1E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 295 324 0.1 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 262 291 0.015 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 196 225 13.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 328 357 0.043 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 35 65 3200.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 165 194 170.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 132 161 2.0E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 99 128 6.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 229 258 0.0032 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_11770 296d16419a7ff8d90429aa38c2af7c44 408 SMART SM00248 66 95 0.099 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEJY3_00670 49c00662163fcd84177c370c26df367e 189 Gene3D G3DSA:3.90.79.10 7 189 4.6E-49 T 14-10-2018 VEJY3_00670 49c00662163fcd84177c370c26df367e 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_00670 49c00662163fcd84177c370c26df367e 189 SUPERFAMILY SSF55811 4 181 3.38E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_00670 49c00662163fcd84177c370c26df367e 189 Pfam PF00293 NUDIX domain 46 155 5.3E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 Gene3D G3DSA:3.55.50.30 47 146 7.4E-10 T 14-10-2018 VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 Pfam PF07655 Secretin N-terminal domain 145 243 1.2E-24 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 518 7.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 7.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 353 377 7.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 523 537 7.2E-18 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 Pfam PF00263 Bacterial type II and III secretion system protein 358 535 1.2E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEJY3_13860 16ea9a9a361e6d5f625a962ebc7ed146 559 SMART SM00965 93 141 6.6E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VEJY3_18401 aca154cf300c3bd89308e0a7b64743dc 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 6.2E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEJY3_18401 aca154cf300c3bd89308e0a7b64743dc 266 SMART SM00382 32 242 4.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18401 aca154cf300c3bd89308e0a7b64743dc 266 SUPERFAMILY SSF52540 6 256 4.47E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18401 aca154cf300c3bd89308e0a7b64743dc 266 Pfam PF00005 ABC transporter 23 185 7.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18401 aca154cf300c3bd89308e0a7b64743dc 266 Gene3D G3DSA:3.40.50.300 1 261 1.2E-61 T 14-10-2018 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 SUPERFAMILY SSF53067 3 195 9.06E-66 T 14-10-2018 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.6E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 PIRSF PIRSF000722 1 397 2.9E-149 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 8.1E-174 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.114 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 Gene3D G3DSA:3.30.420.40 2 194 1.9E-75 T 14-10-2018 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 Gene3D G3DSA:3.30.420.40 195 397 2.4E-82 T 14-10-2018 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 Pfam PF00871 Acetokinase family 5 390 2.6E-167 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_10825 a7c5f20b2d8526b0a130b23dcafe739c 398 SUPERFAMILY SSF53067 156 395 2.09E-85 T 14-10-2018 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 Gene3D G3DSA:1.10.287.1040 4 80 1.6E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 SUPERFAMILY SSF116842 2 72 8.89E-21 T 14-10-2018 VEJY3_03170 fc17decfd2f4e60fe9c570f9c27cfc39 80 PIRSF PIRSF006488 1 80 7.9E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Gene3D G3DSA:1.10.287.950 297 627 4.2E-74 T 14-10-2018 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 SMART SM00283 365 626 2.9E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 593 2.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Gene3D G3DSA:3.30.450.20 53 264 2.2E-52 T 14-10-2018 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 SUPERFAMILY SSF58104 318 627 3.79E-77 T 14-10-2018 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 SMART SM00304 353 403 4.1 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 SMART SM00304 296 350 1.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 SUPERFAMILY SSF103190 77 174 3.92E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Pfam PF02743 Cache domain 41 258 6.1E-30 T 14-10-2018 IPR033479 Double Cache domain 1 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Gene3D G3DSA:3.30.450.20 60 168 2.2E-52 T 14-10-2018 VEJY3_10035 9b2d6aaf01d0c7b94376dead5193267d 627 Pfam PF00672 HAMP domain 300 346 2.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_08815 3f86f7735efeb7cdaee59ff2436a87f9 155 Gene3D G3DSA:3.10.400.10 1 155 8.4E-53 T 14-10-2018 VEJY3_08815 3f86f7735efeb7cdaee59ff2436a87f9 155 SMART SM01022 30 154 1.4E-27 T 14-10-2018 IPR007374 ASCH domain VEJY3_08815 3f86f7735efeb7cdaee59ff2436a87f9 155 SUPERFAMILY SSF88697 6 154 4.47E-44 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_08815 3f86f7735efeb7cdaee59ff2436a87f9 155 Pfam PF04266 ASCH domain 40 153 6.6E-21 T 14-10-2018 IPR007374 ASCH domain VEJY3_08815 3f86f7735efeb7cdaee59ff2436a87f9 155 PIRSF PIRSF021320 5 155 8.4E-43 T 14-10-2018 IPR009326 Protein of unknown function DUF984 VEJY3_03895 7c1f24637e96f68a9fa12c6f24ab7320 75 SMART SM00899 1 74 3.8E-21 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VEJY3_03895 7c1f24637e96f68a9fa12c6f24ab7320 75 Gene3D G3DSA:2.30.30.90 1 75 1.7E-21 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain VEJY3_03895 7c1f24637e96f68a9fa12c6f24ab7320 75 SUPERFAMILY SSF50037 5 74 1.74E-17 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VEJY3_03895 7c1f24637e96f68a9fa12c6f24ab7320 75 Pfam PF04023 FeoA domain 1 74 2.0E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 Pfam PF03466 LysR substrate binding domain 93 296 6.2E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 Gene3D G3DSA:3.40.190.10 168 267 6.4E-47 T 14-10-2018 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 SUPERFAMILY SSF53850 88 294 7.24E-37 T 14-10-2018 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 Gene3D G3DSA:1.10.10.10 1 86 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 Gene3D G3DSA:3.40.190.10 90 291 6.4E-47 T 14-10-2018 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17481 22a0d82ca8bbfa5acf42fe3c57c2bb0c 304 SUPERFAMILY SSF46785 2 84 9.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_11215 7ce38d7785a437d2d3364bc062fa7691 109 PIRSF PIRSF004555 3 109 5.3E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEJY3_11215 7ce38d7785a437d2d3364bc062fa7691 109 SUPERFAMILY SSF82607 11 103 1.03E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VEJY3_11215 7ce38d7785a437d2d3364bc062fa7691 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEJY3_11215 7ce38d7785a437d2d3364bc062fa7691 109 Gene3D G3DSA:3.30.1310.10 1 109 4.6E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VEJY3_11215 7ce38d7785a437d2d3364bc062fa7691 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.548 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.839 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 1.8E-33 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 6.3E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 SUPERFAMILY SSF53187 179 496 4.39E-125 T 14-10-2018 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 Gene3D G3DSA:3.40.630.10 181 497 3.3E-141 T 14-10-2018 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 SUPERFAMILY SSF52949 1 184 2.24E-51 T 14-10-2018 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_13570 31d92a7d453d8cd809fc113958f72702 502 Gene3D G3DSA:3.40.220.10 1 159 1.4E-58 T 14-10-2018 VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 SUPERFAMILY SSF143414 178 249 3.92E-9 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 PIRSF PIRSF012290 14 264 3.1E-96 T 14-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 Gene3D G3DSA:3.30.70.1810 146 237 2.9E-36 T 14-10-2018 VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 SUPERFAMILY SSF143414 72 149 4.58E-8 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 Gene3D G3DSA:3.30.70.1810 53 145 2.9E-36 T 14-10-2018 VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 38 264 6.4E-113 T 14-10-2018 IPR030984 Microcompartment protein PduB GO:0005198 VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 Pfam PF00936 BMC domain 73 141 6.1E-10 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 Pfam PF00936 BMC domain 179 247 2.3E-11 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 SMART SM00877 178 255 1.5E-10 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08445 1de1d76e7688199eabcb3ea092628e8b 264 SMART SM00877 72 154 2.3E-9 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 Gene3D G3DSA:3.10.580.10 194 345 7.0E-37 T 14-10-2018 VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 Pfam PF03471 Transporter associated domain 346 425 7.9E-19 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 Gene3D G3DSA:3.30.465.10 346 426 3.6E-24 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 SUPERFAMILY SSF54631 201 334 8.17E-22 T 14-10-2018 VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 SMART SM01091 345 427 5.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 Pfam PF01595 Domain of unknown function DUF21 10 198 3.6E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain VEJY3_04105 4ef140901e5142b7e44268060a2a7fcf 437 SUPERFAMILY SSF56176 346 423 2.73E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 SMART SM00434 11 498 0.0 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Gene3D G3DSA:3.30.1360.40 236 332 3.6E-237 T 14-10-2018 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Gene3D G3DSA:3.90.199.10 33 520 3.6E-237 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.644 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Gene3D G3DSA:1.10.268.10 369 492 3.6E-237 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 SUPERFAMILY SSF56719 30 520 9.94E-188 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Gene3D G3DSA:2.120.10.90 534 840 8.7E-127 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.9E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.3E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 4.4E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.1E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 1.6E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEJY3_10125 327077903fb5d24c63c970301c63c782 877 SUPERFAMILY SSF101904 532 852 3.92E-113 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEJY3_10125 327077903fb5d24c63c970301c63c782 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 2.6E-158 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 Gene3D G3DSA:2.60.120.10 99 184 7.6E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 SUPERFAMILY SSF51182 50 183 4.93E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 Gene3D G3DSA:1.10.260.40 4 73 1.2E-17 T 14-10-2018 VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 Pfam PF01381 Helix-turn-helix 11 65 9.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 Pfam PF07883 Cupin domain 110 177 1.8E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 SUPERFAMILY SSF47413 2 73 1.63E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_04410 6b232bc03dc96275bdd159e362550b12 184 SMART SM00530 10 65 2.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 Gene3D G3DSA:3.40.190.10 74 281 2.6E-42 T 14-10-2018 VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 SUPERFAMILY SSF46785 3 70 2.79E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 50 1.3E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 Gene3D G3DSA:1.10.10.10 1 71 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 Pfam PF03466 LysR substrate binding domain 80 286 5.0E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 SUPERFAMILY SSF53850 74 284 3.26E-34 T 14-10-2018 VEJY3_06920 27092fe5dc877b998fd71e450f6cef78 294 Gene3D G3DSA:3.40.190.10 159 257 2.6E-42 T 14-10-2018 VEJY3_23836 316de6bbde653077669aca76bd2e1325 253 SUPERFAMILY SSF52540 2 226 1.73E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23836 316de6bbde653077669aca76bd2e1325 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23836 316de6bbde653077669aca76bd2e1325 253 Gene3D G3DSA:3.40.50.300 1 251 3.0E-61 T 14-10-2018 VEJY3_23836 316de6bbde653077669aca76bd2e1325 253 Pfam PF00005 ABC transporter 18 164 3.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23836 316de6bbde653077669aca76bd2e1325 253 SMART SM00382 26 213 5.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_09985 6a597d1456df0a76d326041296fdf4e2 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.6E-226 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEJY3_09985 6a597d1456df0a76d326041296fdf4e2 453 Gene3D G3DSA:3.30.1330.90 10 159 3.4E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_09985 6a597d1456df0a76d326041296fdf4e2 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.3E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEJY3_09985 6a597d1456df0a76d326041296fdf4e2 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.8E-97 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEJY3_09985 6a597d1456df0a76d326041296fdf4e2 453 SUPERFAMILY SSF143548 16 157 4.45E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_08680 ec87d7e884f579bdd0511d18b0bc8d92 298 Gene3D G3DSA:3.20.20.150 2 295 1.1E-82 T 14-10-2018 VEJY3_08680 ec87d7e884f579bdd0511d18b0bc8d92 298 Pfam PF01261 Xylose isomerase-like TIM barrel 36 249 5.8E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_08680 ec87d7e884f579bdd0511d18b0bc8d92 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 52.854 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 VEJY3_08680 ec87d7e884f579bdd0511d18b0bc8d92 298 SUPERFAMILY SSF51658 7 296 1.02E-60 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08680 ec87d7e884f579bdd0511d18b0bc8d92 298 Pfam PF07582 AP endonuclease family 2 C terminus 251 294 3.4E-5 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 2.5E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 PIRSF PIRSF000495 4 204 4.6E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 Gene3D G3DSA:3.40.50.880 2 204 4.0E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 SUPERFAMILY SSF52317 5 203 3.3E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.792 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEJY3_05575 288a2f0ea8ad953eb465fe1da9b20e04 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 2.0E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 SMART SM01134 71 231 2.5E-49 T 14-10-2018 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 SUPERFAMILY SSF46785 1 61 6.82E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 Gene3D G3DSA:1.10.10.10 1 52 5.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 3.4E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 3.4E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 1.2E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 SMART SM00420 4 56 1.9E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 Pfam PF00455 DeoR C terminal sensor domain 73 229 2.3E-41 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_11305 75ac3e9f8cb77fe09b9e07b29de394d6 250 SUPERFAMILY SSF100950 73 231 1.0E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 14-10-2018 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 14-10-2018 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 14-10-2018 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_15120 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82866 798 1039 5.36E-51 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82714 716 800 1.57E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82693 137 328 5.75E-23 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.2090.10 716 804 1.6E-273 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.70.1320 135 328 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 3.0E-245 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.70.1430 562 664 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.2090.10 182 274 1.6E-273 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82693 46 127 5.49E-20 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:1.20.1640.10 15 508 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.70.1430 42 812 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:3.30.70.1440 665 862 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82866 294 498 3.53E-43 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 Gene3D G3DSA:1.20.1640.10 509 1030 1.6E-273 T 14-10-2018 VEJY3_22141 1a3127378e7b44f5b9dca75c9af80eb5 1046 SUPERFAMILY SSF82714 185 269 1.44E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_11060 8490e4c3580a3b90d2762bf0ba773c58 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 26 121 1.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_11060 8490e4c3580a3b90d2762bf0ba773c58 670 Pfam PF00593 TonB dependent receptor 246 667 4.3E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_11060 8490e4c3580a3b90d2762bf0ba773c58 670 Gene3D G3DSA:2.40.170.20 144 670 1.1E-108 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_11060 8490e4c3580a3b90d2762bf0ba773c58 670 SUPERFAMILY SSF56935 10 670 2.08E-113 T 14-10-2018 VEJY3_11060 8490e4c3580a3b90d2762bf0ba773c58 670 Gene3D G3DSA:2.170.130.10 3 129 3.6E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 15 110 1.5E-27 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 Gene3D G3DSA:3.30.70.270 187 363 1.6E-21 T 14-10-2018 VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 SUPERFAMILY SSF55073 209 362 2.28E-17 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 357 4.4E-19 T 14-10-2018 IPR000160 GGDEF domain VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 Pfam PF00563 EAL domain 382 613 5.6E-48 T 14-10-2018 IPR001633 EAL domain VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 SMART SM00267 192 362 4.0E-9 T 14-10-2018 IPR000160 GGDEF domain VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 Gene3D G3DSA:3.20.20.450 373 616 9.8E-37 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 SMART SM00052 373 617 6.9E-12 T 14-10-2018 IPR001633 EAL domain VEJY3_13880 24505fad76439d211eb170fd5992ac3f 645 SUPERFAMILY SSF141868 382 613 2.48E-36 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Gene3D G3DSA:1.10.150.20 3 41 5.0E-5 T 14-10-2018 VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 6.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Gene3D G3DSA:2.40.50.140 47 141 2.9E-13 T 14-10-2018 VEJY3_00730 759686911980ee4725fdfd675a58377d 693 SUPERFAMILY SSF52540 292 653 2.61E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00730 759686911980ee4725fdfd675a58377d 693 SMART SM00490 505 589 1.2E-21 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Gene3D G3DSA:3.40.50.300 457 630 8.7E-53 T 14-10-2018 VEJY3_00730 759686911980ee4725fdfd675a58377d 693 SUPERFAMILY SSF50249 9 174 2.74E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_00730 759686911980ee4725fdfd675a58377d 693 SUPERFAMILY SSF52540 200 453 7.17E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 3.1E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Gene3D G3DSA:3.40.50.300 208 450 1.6E-83 T 14-10-2018 VEJY3_00730 759686911980ee4725fdfd675a58377d 693 SMART SM00487 265 459 3.5E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_00730 759686911980ee4725fdfd675a58377d 693 Pfam PF17191 RecG wedge domain 14 172 1.1E-21 T 14-10-2018 IPR033454 RecG, wedge domain VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 Gene3D G3DSA:2.10.109.10 78 272 3.7E-74 T 14-10-2018 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 Pfam PF10502 Signal peptidase, peptidase S26 228 269 1.4E-7 T 14-10-2018 IPR019533 Peptidase S26 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 SUPERFAMILY SSF51306 78 298 1.05E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 Pfam PF00717 Peptidase S24-like 86 164 7.5E-22 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 Gene3D G3DSA:2.170.230.10 155 231 3.7E-74 T 14-10-2018 VEJY3_13270 56880fd2d7172f21959890160cb633c4 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VEJY3_24221 557195c5c01b11f05291a4a7c079b747 369 Pfam PF17186 Lipocalin-like domain 245 369 1.0E-40 T 14-10-2018 VEJY3_24221 557195c5c01b11f05291a4a7c079b747 369 Gene3D G3DSA:2.40.370.10 55 245 3.4E-65 T 14-10-2018 IPR023374 AttH-like domain superfamily VEJY3_24221 557195c5c01b11f05291a4a7c079b747 369 SUPERFAMILY SSF159245 44 369 6.15E-102 T 14-10-2018 VEJY3_24221 557195c5c01b11f05291a4a7c079b747 369 Pfam PF07143 CrtC N-terminal lipocalin domain 67 242 8.5E-55 T 14-10-2018 IPR010791 AttH domain VEJY3_24221 557195c5c01b11f05291a4a7c079b747 369 Gene3D G3DSA:2.40.370.10 246 369 7.2E-32 T 14-10-2018 IPR023374 AttH-like domain superfamily VEJY3_13595 7a42a23ff3d08ecde24561a67a358c1d 266 SUPERFAMILY SSF49785 2 156 1.6E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_13595 7a42a23ff3d08ecde24561a67a358c1d 266 Gene3D G3DSA:2.60.120.260 26 157 2.1E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_00875 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEJY3_00875 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00875 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00875 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_00875 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 Gene3D G3DSA:3.40.50.12740 5 211 2.5E-66 T 14-10-2018 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 Pfam PF00072 Response regulator receiver domain 7 119 4.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 SMART SM00421 148 205 9.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 SUPERFAMILY SSF52172 4 135 6.97E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 SUPERFAMILY SSF46894 140 210 3.74E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_10050 9157b2aa6abd0acd636f2cc54a0837e0 212 SMART SM00448 5 118 8.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.803 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 Gene3D G3DSA:1.10.150.130 14 108 4.4E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 SUPERFAMILY SSF47823 16 107 5.3E-12 T 14-10-2018 VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 Pfam PF00589 Phage integrase family 122 290 8.5E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 Gene3D G3DSA:1.10.443.10 121 298 1.3E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 SUPERFAMILY SSF56349 117 302 1.27E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_15040 75507dc67c6fab8ea9315078427bced0 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 1.3E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_17846 e82dfb69e774f6543a9d89e4c32af03a 304 Pfam PF01738 Dienelactone hydrolase family 28 134 8.9E-9 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEJY3_17846 e82dfb69e774f6543a9d89e4c32af03a 304 Gene3D G3DSA:3.40.50.1820 12 285 2.3E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17846 e82dfb69e774f6543a9d89e4c32af03a 304 Gene3D G3DSA:1.10.10.800 142 230 2.3E-91 T 14-10-2018 VEJY3_17846 e82dfb69e774f6543a9d89e4c32af03a 304 SUPERFAMILY SSF53474 4 304 7.96E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 Gene3D G3DSA:3.40.1380.20 342 476 1.4E-155 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 SUPERFAMILY SSF52935 329 478 1.83E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 SUPERFAMILY SSF51621 4 344 1.78E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 SUPERFAMILY SSF50800 74 169 4.88E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 3.4E-130 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 2.5E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 Gene3D G3DSA:2.40.33.10 74 172 1.4E-155 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 Gene3D G3DSA:3.20.20.60 6 341 1.4E-155 T 14-10-2018 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_10600 43b85ffdcdfb3336225d5fd881eef5fb 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 3.9E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Pfam PF17192 MukF middle domain 126 286 2.2E-78 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Gene3D G3DSA:1.20.58.590 124 316 2.2E-80 T 14-10-2018 IPR036141 MukF, middle domain superfamily VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Gene3D G3DSA:1.10.225.40 358 445 2.9E-37 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 SUPERFAMILY SSF140570 124 286 3.27E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 SUPERFAMILY SSF46785 13 123 3.92E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 PIRSF PIRSF018282 1 445 5.5E-247 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Gene3D G3DSA:1.10.10.10 29 123 6.0E-45 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Pfam PF17193 MukF C-terminal domain 288 445 1.2E-77 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Pfam PF03882 MukF winged-helix domain 10 122 3.3E-53 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VEJY3_04810 b3d613d3906f091fd2c908feb425a17f 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.319 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VEJY3_18796 3872b1d3a4f3a99236f6518a419b87bd 856 SUPERFAMILY SSF56219 463 811 5.33E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_18796 3872b1d3a4f3a99236f6518a419b87bd 856 Gene3D G3DSA:3.60.10.10 464 816 4.7E-17 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_18796 3872b1d3a4f3a99236f6518a419b87bd 856 Pfam PF00932 Lamin Tail Domain 18 124 1.9E-16 T 14-10-2018 IPR001322 Lamin tail domain VEJY3_18796 3872b1d3a4f3a99236f6518a419b87bd 856 SUPERFAMILY SSF74853 8 116 1.44E-6 T 14-10-2018 IPR036415 Lamin tail domain superfamily VEJY3_18796 3872b1d3a4f3a99236f6518a419b87bd 856 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 468 759 7.7E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 Gene3D G3DSA:3.40.50.150 168 341 1.9E-40 T 14-10-2018 VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 5.9E-55 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 Pfam PF05175 Methyltransferase small domain 173 336 1.9E-60 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 SUPERFAMILY SSF53335 156 334 1.88E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 Gene3D G3DSA:3.40.50.150 1 157 3.0E-48 T 14-10-2018 VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.042 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VEJY3_12805 424fdd199d1482c5e381e5e34aa3b3af 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_09665 c8a4719cf20dc027427ffacdc73d99a3 126 Gene3D G3DSA:2.170.150.70 5 125 7.8E-26 T 14-10-2018 VEJY3_09665 c8a4719cf20dc027427ffacdc73d99a3 126 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 85 2.1E-5 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_09665 c8a4719cf20dc027427ffacdc73d99a3 126 SUPERFAMILY SSF51316 1 86 2.62E-23 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_07160 df0345ddec09e27940668af36e647c59 195 SUPERFAMILY SSF53448 7 189 1.43E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_07160 df0345ddec09e27940668af36e647c59 195 Gene3D G3DSA:3.90.550.10 3 193 5.8E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_07160 df0345ddec09e27940668af36e647c59 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.634 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VEJY3_07160 df0345ddec09e27940668af36e647c59 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 8.3E-34 T 14-10-2018 IPR025877 MobA-like NTP transferase VEJY3_07160 df0345ddec09e27940668af36e647c59 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 3.1E-73 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 Gene3D G3DSA:3.40.50.2300 1 130 2.4E-30 T 14-10-2018 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 SMART SM00850 145 239 3.7E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 Pfam PF00072 Response regulator receiver domain 5 112 3.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 Pfam PF04397 LytTr DNA-binding domain 146 238 3.6E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 Gene3D G3DSA:2.40.50.1020 159 241 7.3E-10 T 14-10-2018 VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 SUPERFAMILY SSF52172 1 123 2.13E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02430 9dcae7b6f3b3c14016215be7e042a907 242 SMART SM00448 2 112 3.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08165 29cac8f8c9730766e3d665d845c6ef42 333 Gene3D G3DSA:3.20.20.30 4 330 1.5E-103 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VEJY3_08165 29cac8f8c9730766e3d665d845c6ef42 333 SUPERFAMILY SSF51679 5 326 1.7E-83 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VEJY3_08165 29cac8f8c9730766e3d665d845c6ef42 333 Pfam PF00296 Luciferase-like monooxygenase 17 261 7.9E-38 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.764 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 SUPERFAMILY SSF55120 6 339 6.47E-98 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 1.9E-23 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 1.4E-41 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 Gene3D G3DSA:3.30.2340.10 170 302 2.2E-106 T 14-10-2018 VEJY3_13195 f1a4d58a29ae121d26334d1e8abcb672 347 Gene3D G3DSA:3.30.2350.20 18 337 2.2E-106 T 14-10-2018 VEJY3_08775 5917948dde53db508b7cef69bd37baf0 400 Pfam PF13641 Glycosyltransferase like family 2 59 277 1.1E-17 T 14-10-2018 VEJY3_08775 5917948dde53db508b7cef69bd37baf0 400 SUPERFAMILY SSF53448 57 318 1.31E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_08775 5917948dde53db508b7cef69bd37baf0 400 Gene3D G3DSA:3.90.550.10 49 261 8.1E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_03250 551c870953bc2dc6c8238a8b21256429 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 3.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_03250 551c870953bc2dc6c8238a8b21256429 225 Gene3D G3DSA:1.10.3720.10 12 225 3.5E-51 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_03250 551c870953bc2dc6c8238a8b21256429 225 SUPERFAMILY SSF161098 15 210 2.88E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_01485 5cd8d954b135afb1e7737060210c3e00 419 Pfam PF12704 MacB-like periplasmic core domain 20 219 1.8E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_01485 5cd8d954b135afb1e7737060210c3e00 419 Pfam PF02687 FtsX-like permease family 317 410 1.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_10290 2a7000058d41634c222985858e07c15f 512 Pfam PF00501 AMP-binding enzyme 7 415 3.5E-114 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_10290 2a7000058d41634c222985858e07c15f 512 Gene3D G3DSA:3.30.300.30 409 511 2.6E-31 T 14-10-2018 VEJY3_10290 2a7000058d41634c222985858e07c15f 512 SUPERFAMILY SSF56801 3 507 2.62E-162 T 14-10-2018 VEJY3_10290 2a7000058d41634c222985858e07c15f 512 Gene3D G3DSA:3.40.50.12780 1 408 1.4E-128 T 14-10-2018 VEJY3_10290 2a7000058d41634c222985858e07c15f 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 499 6.9E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_10290 2a7000058d41634c222985858e07c15f 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 SMART SM00448 3 126 2.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 Gene3D G3DSA:3.40.50.180 177 366 2.5E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 SUPERFAMILY SSF52738 179 364 1.31E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 38.749 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 PIRSF PIRSF000876 1 368 2.0E-127 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 Pfam PF00072 Response regulator receiver domain 5 109 1.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 Pfam PF01339 CheB methylesterase 185 363 3.1E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 SUPERFAMILY SSF52172 2 109 4.84E-27 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_11475 7ed7d39042eb6d814114c8ecadf56124 370 Gene3D G3DSA:3.40.50.2300 2 130 8.7E-32 T 14-10-2018 VEJY3_04245 eab62d3bdfeb6218f4858b27c909a757 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.8E-24 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain VEJY3_04245 eab62d3bdfeb6218f4858b27c909a757 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 435 34.35 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VEJY3_04245 eab62d3bdfeb6218f4858b27c909a757 440 SMART SM00471 58 264 2.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_04245 eab62d3bdfeb6218f4858b27c909a757 440 SUPERFAMILY SSF109604 19 437 5.09E-78 T 14-10-2018 VEJY3_04245 eab62d3bdfeb6218f4858b27c909a757 440 Pfam PF01966 HD domain 62 147 5.3E-8 T 14-10-2018 IPR006674 HD domain VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 SUPERFAMILY SSF47413 2 70 1.64E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 SMART SM00530 9 64 5.0E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 SUPERFAMILY SSF51182 49 183 9.41E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 Gene3D G3DSA:1.10.260.40 1 66 4.2E-22 T 14-10-2018 VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 Pfam PF07883 Cupin domain 111 178 2.3E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_08290 d256148873dc0c4e883a758b83de5604 185 Gene3D G3DSA:2.60.120.10 69 179 1.2E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_05360 1e90b966b1233db617f1ab6e34ac15e8 387 Pfam PF03594 Benzoate membrane transport protein 5 378 3.2E-139 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VEJY3_18206 07bd24a373cb110c8e513f33dc7e3984 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 4 60 3.0E-22 T 14-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal VEJY3_13885 ea970bdf4c12b0ae5678bebcaadc36c5 179 PIRSF PIRSF002070 2 176 1.5E-37 T 14-10-2018 VEJY3_13885 ea970bdf4c12b0ae5678bebcaadc36c5 179 Gene3D G3DSA:2.40.50.140 1 116 3.5E-50 T 14-10-2018 VEJY3_13885 ea970bdf4c12b0ae5678bebcaadc36c5 179 SUPERFAMILY SSF50249 4 179 2.57E-64 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_13885 ea970bdf4c12b0ae5678bebcaadc36c5 179 Pfam PF00436 Single-strand binding protein family 6 106 9.3E-44 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VEJY3_13885 ea970bdf4c12b0ae5678bebcaadc36c5 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.771 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VEJY3_07600 dc2f48fd13c156edcc00a5c7af307e15 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VEJY3_07600 dc2f48fd13c156edcc00a5c7af307e15 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VEJY3_07600 dc2f48fd13c156edcc00a5c7af307e15 1613 SUPERFAMILY SSF51735 945 1281 7.22E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_07600 dc2f48fd13c156edcc00a5c7af307e15 1613 SUPERFAMILY SSF53223 754 940 1.25E-26 T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 SMART SM00354 1 71 6.8E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 Gene3D G3DSA:3.40.50.2300 164 286 9.2E-64 T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 Gene3D G3DSA:1.10.260.40 1 59 3.2E-20 T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 SUPERFAMILY SSF47413 1 60 1.55E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 Gene3D G3DSA:3.40.50.2300 65 309 9.2E-64 T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 1.2E-28 T 14-10-2018 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.9E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_23791 979ec4a6d0944c4a85d846f98eff4254 328 SUPERFAMILY SSF53822 58 318 5.5E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_02460 b2619d46d0822f72fa5bed6d2e031496 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 2.8E-167 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VEJY3_02460 b2619d46d0822f72fa5bed6d2e031496 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.822 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VEJY3_02460 b2619d46d0822f72fa5bed6d2e031496 370 SUPERFAMILY SSF53067 6 343 1.44E-25 T 14-10-2018 VEJY3_02460 b2619d46d0822f72fa5bed6d2e031496 370 Gene3D G3DSA:3.30.420.40 146 329 1.4E-133 T 14-10-2018 VEJY3_02460 b2619d46d0822f72fa5bed6d2e031496 370 Gene3D G3DSA:3.30.420.40 12 364 1.4E-133 T 14-10-2018 VEJY3_21151 262d4f488a761121bdead03196fba350 484 SUPERFAMILY SSF53067 251 472 4.06E-41 T 14-10-2018 VEJY3_21151 262d4f488a761121bdead03196fba350 484 Gene3D G3DSA:3.30.420.40 1 243 2.7E-59 T 14-10-2018 VEJY3_21151 262d4f488a761121bdead03196fba350 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 247 3.9E-74 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEJY3_21151 262d4f488a761121bdead03196fba350 484 ProDom PD006876 U63 ORF BDLF4 UL92 GENE ORF31 BORF T92 ORF21 PR92 33 142 4.0E-4 T 14-10-2018 IPR004289 Herpesvirus UL92 VEJY3_21151 262d4f488a761121bdead03196fba350 484 Gene3D G3DSA:3.30.420.40 244 482 2.9E-42 T 14-10-2018 VEJY3_21151 262d4f488a761121bdead03196fba350 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_21151 262d4f488a761121bdead03196fba350 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 445 5.3E-26 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEJY3_21151 262d4f488a761121bdead03196fba350 484 Hamap MF_00986 L-fuculokinase [fucK]. 1 469 57.392 T 14-10-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 VEJY3_21151 262d4f488a761121bdead03196fba350 484 SUPERFAMILY SSF53067 4 250 1.44E-59 T 14-10-2018 VEJY3_21151 262d4f488a761121bdead03196fba350 484 PIRSF PIRSF000538 1 484 2.5E-83 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 Pfam PF00245 Alkaline phosphatase 26 504 7.0E-84 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 SMART SM00098 27 432 9.2E-54 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 1.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 1.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 1.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 1.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 1.2E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 Gene3D G3DSA:3.40.720.10 461 525 2.8E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 Gene3D G3DSA:3.40.720.10 24 376 1.0E-136 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 Gene3D G3DSA:1.10.1200.140 388 438 2.9E-17 T 14-10-2018 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 Gene3D G3DSA:3.30.40.70 439 460 3.9E-19 T 14-10-2018 VEJY3_11180 386bd6a943a8afc77f47b17d8408fd0d 525 SUPERFAMILY SSF53649 8 505 4.58E-112 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_04700 0c88f31821caecfdecdb5539e026e24e 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 VEJY3_04700 0c88f31821caecfdecdb5539e026e24e 741 Gene3D G3DSA:3.40.718.10 410 654 9.6E-10 T 14-10-2018 VEJY3_04700 0c88f31821caecfdecdb5539e026e24e 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VEJY3_04700 0c88f31821caecfdecdb5539e026e24e 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 SUPERFAMILY SSF51419 27 284 2.47E-83 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 Gene3D G3DSA:2.40.37.10 17 404 3.3E-153 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 SUPERFAMILY SSF50621 261 414 4.19E-53 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 Gene3D G3DSA:3.20.20.10 35 277 3.3E-153 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.409 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 7.7E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.7E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.7E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 7.7E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.4E-168 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.5E-26 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEJY3_15055 e4306c71276c2f7855e0a256025bc25a 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.1E-71 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEJY3_20881 cdfd14b46139c5d0623413168dc47d64 163 SUPERFAMILY SSF52540 39 144 9.18E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20881 cdfd14b46139c5d0623413168dc47d64 163 Gene3D G3DSA:3.40.50.300 10 151 5.5E-6 T 14-10-2018 VEJY3_11485 d2e1b63f3a21dbb51d0b9ccfe5061da5 246 SUPERFAMILY SSF75708 26 245 1.57E-66 T 14-10-2018 VEJY3_11485 d2e1b63f3a21dbb51d0b9ccfe5061da5 246 PIRSF PIRSF002884 13 246 3.7E-90 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VEJY3_11485 d2e1b63f3a21dbb51d0b9ccfe5061da5 246 Gene3D G3DSA:1.10.287.500 55 189 1.7E-46 T 14-10-2018 VEJY3_11485 d2e1b63f3a21dbb51d0b9ccfe5061da5 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 2.7E-77 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VEJY3_16536 6065a5f7144a24a90dfcb28d1f2baa0b 417 Gene3D G3DSA:3.40.50.1110 132 412 6.0E-40 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VEJY3_16536 6065a5f7144a24a90dfcb28d1f2baa0b 417 SUPERFAMILY SSF52266 145 407 1.47E-22 T 14-10-2018 VEJY3_16536 6065a5f7144a24a90dfcb28d1f2baa0b 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 146 157 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VEJY3_16536 6065a5f7144a24a90dfcb28d1f2baa0b 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 404 7.8E-17 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 5.7E-78 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 Gene3D G3DSA:3.30.70.20 139 223 1.0E-9 T 14-10-2018 VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 SUPERFAMILY SSF54862 63 209 3.91E-24 T 14-10-2018 VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 0.0011 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 4.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_23421 8452a8ddc0ec21a8971b85434cb51ba6 256 Gene3D G3DSA:3.30.70.20 60 136 7.7E-10 T 14-10-2018 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Gene3D G3DSA:3.40.50.300 10 273 7.7E-97 T 14-10-2018 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Gene3D G3DSA:3.40.50.300 281 636 1.1E-131 T 14-10-2018 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Gene3D G3DSA:1.10.10.160 114 187 7.7E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 7.8E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 SUPERFAMILY SSF52540 7 642 6.89E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.9E-79 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEJY3_15180 127f56f75a86ee90153d8a9d68c22051 723 Gene3D G3DSA:1.10.486.10 382 538 1.1E-131 T 14-10-2018 VEJY3_16046 4dbd9214b3b31f5f04a95f961b5049db 185 PIRSF PIRSF011443 1 179 7.0E-64 T 14-10-2018 IPR026267 Inner membrane protein YgjV VEJY3_16046 4dbd9214b3b31f5f04a95f961b5049db 185 Pfam PF10688 Bacterial inner membrane protein 6 162 2.8E-53 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VEJY3_06050 8f8330e9b33e1704b02b393e8271fd9e 411 Gene3D G3DSA:3.40.640.10 33 289 6.5E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_06050 8f8330e9b33e1704b02b393e8271fd9e 411 Pfam PF00266 Aminotransferase class-V 26 401 9.3E-70 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_06050 8f8330e9b33e1704b02b393e8271fd9e 411 SUPERFAMILY SSF53383 3 410 8.16E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_06050 8f8330e9b33e1704b02b393e8271fd9e 411 Gene3D G3DSA:3.90.1150.10 24 404 6.5E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 Gene3D G3DSA:3.40.50.12740 14 223 1.1E-63 T 14-10-2018 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 1.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 Pfam PF00072 Response regulator receiver domain 15 126 6.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 SUPERFAMILY SSF46894 159 221 2.24E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 SMART SM00421 161 218 9.7E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 SMART SM00448 13 126 3.5E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 SUPERFAMILY SSF52172 14 144 9.82E-35 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_21021 d2c686c52a3b020ea6264e07845489f1 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Gene3D G3DSA:3.40.1060.10 385 681 1.1E-149 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 SUPERFAMILY SSF52016 163 372 1.12E-70 T 14-10-2018 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Gene3D G3DSA:3.30.499.10 402 529 1.1E-149 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 SUPERFAMILY SSF53732 380 860 1.18E-146 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.7E-67 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.0E-98 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Gene3D G3DSA:3.30.499.10 683 865 2.2E-72 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Gene3D G3DSA:1.25.40.310 1 161 1.5E-72 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Gene3D G3DSA:3.20.19.10 162 361 3.1E-82 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 SUPERFAMILY SSF74778 2 160 1.15E-68 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEJY3_12910 e3fff6a281535765a1aeef860001445f 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.6E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 Gene3D G3DSA:3.40.50.720 1 166 9.8E-51 T 14-10-2018 VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 SUPERFAMILY SSF51735 2 165 1.25E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 SUPERFAMILY SSF48179 167 290 1.39E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.2E-30 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 Gene3D G3DSA:1.10.1040.10 167 296 1.2E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_12290 f9ca01a50a740c17a7c332a475fa618d 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 6.6E-36 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VEJY3_22431 fa8b0c636750bf897bf703602f86bdfb 368 Pfam PF01553 Acyltransferase 92 203 3.6E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_22431 fa8b0c636750bf897bf703602f86bdfb 368 SUPERFAMILY SSF69593 91 244 3.66E-9 T 14-10-2018 VEJY3_19946 d79f9861f52cbd2cb3c7a1293121c33a 110 Gene3D G3DSA:3.30.70.120 1 108 3.2E-36 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEJY3_19946 d79f9861f52cbd2cb3c7a1293121c33a 110 SUPERFAMILY SSF54913 4 106 8.53E-34 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_19946 d79f9861f52cbd2cb3c7a1293121c33a 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 1.5E-33 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 Gene3D G3DSA:3.20.20.140 1 255 2.3E-101 T 14-10-2018 VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 PIRSF PIRSF005902 1 255 2.0E-84 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 SUPERFAMILY SSF51556 1 253 2.53E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 Pfam PF01026 TatD related DNase 3 253 7.5E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_10650 443fbbf65af8fd46a0c56a16885f1ec5 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 Pfam PF00561 alpha/beta hydrolase fold 37 273 1.7E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 2.9E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 2.9E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 2.9E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 2.9E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 Hamap MF_01654 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [mhpC]. 2 287 66.815 T 14-10-2018 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GO:0005737|GO:0016787|GO:0018771|GO:0019439|GO:0042803 KEGG: 00360+3.7.1.14|MetaCyc: PWY-6690 VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 Gene3D G3DSA:3.40.50.1820 3 286 3.0E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_06790 97f61cca15e932f3dbbe08c7974b8bef 287 SUPERFAMILY SSF53474 23 286 1.86E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_00345 6083b7dd5a45210dd4716934144a9624 474 Pfam PF00263 Bacterial type II and III secretion system protein 266 426 2.3E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEJY3_00345 6083b7dd5a45210dd4716934144a9624 474 Pfam PF13629 Pilus formation protein N terminal region 25 94 1.0E-15 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VEJY3_00345 6083b7dd5a45210dd4716934144a9624 474 PRINTS PR00811 Bacterial general secretion pathway protein D signature 262 286 1.7E-8 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00345 6083b7dd5a45210dd4716934144a9624 474 PRINTS PR00811 Bacterial general secretion pathway protein D signature 198 208 1.7E-8 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_00345 6083b7dd5a45210dd4716934144a9624 474 PRINTS PR00811 Bacterial general secretion pathway protein D signature 391 409 1.7E-8 T 14-10-2018 IPR001775 GspD/PilQ family VEJY3_07765 1c7c03dbdfe4181635cd260dbbf96e9b 231 Gene3D G3DSA:3.40.50.620 1 230 2.4E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_07765 1c7c03dbdfe4181635cd260dbbf96e9b 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.323 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEJY3_07765 1c7c03dbdfe4181635cd260dbbf96e9b 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.2E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEJY3_07765 1c7c03dbdfe4181635cd260dbbf96e9b 231 PIRSF PIRSF006293 1 224 7.5E-84 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEJY3_07765 1c7c03dbdfe4181635cd260dbbf96e9b 231 SUPERFAMILY SSF52402 1 212 1.85E-67 T 14-10-2018 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 SUPERFAMILY SSF52096 3 304 1.9E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.9E-54 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 212 3.9E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Gene3D G3DSA:1.10.1040.50 497 698 1.7E-72 T 14-10-2018 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Gene3D G3DSA:3.90.226.10 1 307 2.2E-97 T 14-10-2018 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 52.937 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 SUPERFAMILY SSF48179 494 593 1.62E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 SUPERFAMILY SSF48179 610 703 4.0E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Gene3D G3DSA:3.40.50.720 310 496 6.9E-59 T 14-10-2018 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 SUPERFAMILY SSF51735 310 491 2.9E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_11375 50c419b01f3408075c39db4061c07682 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 6.5E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_11375 50c419b01f3408075c39db4061c07682 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 4.3E-26 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 Gene3D G3DSA:3.40.190.10 92 284 1.4E-40 T 14-10-2018 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 SUPERFAMILY SSF46785 2 111 5.34E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 Gene3D G3DSA:3.40.190.10 166 266 1.4E-40 T 14-10-2018 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 SUPERFAMILY SSF53850 92 295 1.71E-26 T 14-10-2018 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 Gene3D G3DSA:1.10.10.10 1 88 5.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17936 bce731b6b4943f0b232d3f2b321e2349 296 Pfam PF03466 LysR substrate binding domain 87 293 2.4E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18351 2c60d0f7d8e2f47729fb30edb7349388 303 Pfam PF00892 EamA-like transporter family 7 130 8.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_18351 2c60d0f7d8e2f47729fb30edb7349388 303 Pfam PF00892 EamA-like transporter family 146 286 1.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_18351 2c60d0f7d8e2f47729fb30edb7349388 303 SUPERFAMILY SSF103481 42 133 2.75E-7 T 14-10-2018 VEJY3_18351 2c60d0f7d8e2f47729fb30edb7349388 303 SUPERFAMILY SSF103481 210 290 1.05E-14 T 14-10-2018 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Gene3D G3DSA:3.40.605.10 15 216 3.8E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Pfam PF00171 Aldehyde dehydrogenase family 5 402 1.3E-24 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Gene3D G3DSA:3.40.50.1970 456 642 6.0E-58 T 14-10-2018 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 SUPERFAMILY SSF56796 452 863 3.01E-115 T 14-10-2018 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Gene3D G3DSA:3.40.309.10 217 398 3.8E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Gene3D G3DSA:3.40.605.10 399 455 1.6E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 SUPERFAMILY SSF53720 6 454 1.44E-83 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 2.0E-112 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_08620 e35e5a8d63aa4b1a3c83ae34f1a2d46f 898 Gene3D G3DSA:1.20.1090.10 643 864 5.2E-61 T 14-10-2018 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 Gene3D G3DSA:1.10.10.60 221 328 4.6E-35 T 14-10-2018 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 SMART SM00342 241 324 1.2E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 SUPERFAMILY SSF46689 225 275 1.61E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 Pfam PF12833 Helix-turn-helix domain 247 322 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 Pfam PF01965 DJ-1/PfpI family 36 181 1.5E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 Gene3D G3DSA:3.40.50.880 14 213 2.3E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 SUPERFAMILY SSF46689 277 325 2.51E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21701 a6a22249dcd29c3a49d50d5be6eb4849 377 SUPERFAMILY SSF52317 18 205 1.87E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 Pfam PF13244 Domain of unknown function (DUF4040) 594 659 5.1E-14 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 Pfam PF00361 Proton-conducting membrane transporter 116 401 5.0E-60 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 763 880 2.0E-25 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 52 103 1.8E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 93 113 6.5E-35 T 14-10-2018 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 296 308 6.5E-35 T 14-10-2018 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 65 90 6.5E-35 T 14-10-2018 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 254 6.5E-35 T 14-10-2018 VEJY3_21191 e401e22f9c5b443262c7531271dda2f7 891 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 206 227 6.5E-35 T 14-10-2018 VEJY3_11660 119ad64a0c7ba4e979eb1a9cf95bd5cc 109 Pfam PF13698 Domain of unknown function (DUF4156) 25 108 9.2E-23 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 VEJY3_15836 b267ae78908f8aba98998646fd6c07f5 340 Pfam PF06580 Histidine kinase 149 227 2.0E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VEJY3_15836 b267ae78908f8aba98998646fd6c07f5 340 Gene3D G3DSA:3.30.565.10 186 340 3.3E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_15836 b267ae78908f8aba98998646fd6c07f5 340 SUPERFAMILY SSF55874 210 338 1.7E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 Pfam PF04545 Sigma-70, region 4 139 187 2.5E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 Gene3D G3DSA:1.10.1740.10 13 96 1.7E-23 T 14-10-2018 VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 Pfam PF04542 Sigma-70 region 2 34 99 1.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 SUPERFAMILY SSF88659 127 189 5.23E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 Gene3D G3DSA:1.10.10.10 127 194 6.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 2.4E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEJY3_12270 3ed2d5bcc2736c1d67fb9a556d0f92f9 194 SUPERFAMILY SSF88946 9 118 8.04E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 Gene3D G3DSA:1.10.10.10 1 92 3.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 Gene3D G3DSA:3.40.190.10 93 290 6.4E-72 T 14-10-2018 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 SUPERFAMILY SSF53850 89 296 4.71E-40 T 14-10-2018 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 Pfam PF03466 LysR substrate binding domain 89 293 1.6E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 Gene3D G3DSA:3.40.190.10 163 267 6.4E-72 T 14-10-2018 VEJY3_10340 81377c42a288b143b338fb39129f18e8 303 SUPERFAMILY SSF46785 1 112 8.94E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 Pfam PF13614 AAA domain 552 680 2.5E-14 T 14-10-2018 IPR025669 AAA domain VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 Gene3D G3DSA:3.40.50.300 464 726 8.3E-67 T 14-10-2018 VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 523 720 9.6E-45 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 Pfam PF02706 Chain length determinant protein 24 106 4.9E-10 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 1.4E-10 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VEJY3_23121 9de14e14134c6bdafb4e22e8eecf4584 726 SUPERFAMILY SSF52540 540 716 3.64E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10805 88b41dc4c080f2d235f31eb60d65c30e 264 Gene3D G3DSA:3.40.50.300 1 255 1.0E-52 T 14-10-2018 VEJY3_10805 88b41dc4c080f2d235f31eb60d65c30e 264 SUPERFAMILY SSF52540 2 231 4.22E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10805 88b41dc4c080f2d235f31eb60d65c30e 264 SMART SM00382 31 226 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_10805 88b41dc4c080f2d235f31eb60d65c30e 264 Pfam PF00005 ABC transporter 22 177 8.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_10805 88b41dc4c080f2d235f31eb60d65c30e 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 PIRSF PIRSF000130 1 488 2.3E-201 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.738 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 SMART SM00116 96 144 4.5E-12 T 14-10-2018 IPR000644 CBS domain VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 SMART SM00116 158 206 2.0E-5 T 14-10-2018 IPR000644 CBS domain VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 Pfam PF00571 CBS domain 95 140 1.2E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 Pfam PF00571 CBS domain 149 201 2.1E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 Gene3D G3DSA:3.20.20.70 1 486 3.5E-211 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.5E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 SMART SM01240 7 473 0.0 T 14-10-2018 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 SUPERFAMILY SSF51412 1 477 8.11E-125 T 14-10-2018 VEJY3_02820 7ab2316f54fa24bb6cd67e43b716f152 488 SUPERFAMILY SSF54631 94 203 2.02E-26 T 14-10-2018 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Gene3D G3DSA:3.30.43.10 1 96 5.1E-14 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 SUPERFAMILY SSF56176 4 268 2.4E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Gene3D G3DSA:3.30.465.10 100 263 8.5E-72 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Gene3D G3DSA:3.30.1370.20 431 515 1.4E-38 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Pfam PF01565 FAD binding domain 41 160 3.7E-9 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 55.065 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 SUPERFAMILY SSF55103 271 561 2.62E-106 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Gene3D G3DSA:3.30.70.610 368 430 9.3E-18 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Gene3D G3DSA:3.30.70.610 264 346 3.5E-17 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 PIRSF PIRSF000101 1 566 1.6E-299 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_19496 775991c827c4edbab8cf4825e55fce86 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 1.3E-136 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 1.9E-28 T 14-10-2018 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 SUPERFAMILY SSF56784 2 209 4.27E-51 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 Gene3D G3DSA:1.10.150.240 15 85 7.3E-54 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_17236 e6b56c2f3b4cae1d2b9817f391d156c3 224 Gene3D G3DSA:3.40.50.1000 5 196 7.3E-54 T 14-10-2018 IPR023214 HAD superfamily VEJY3_01700 3d9ea0e4362b9988559d2f7cb7e2be85 182 SMART SM00014 71 177 6.3E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEJY3_01700 3d9ea0e4362b9988559d2f7cb7e2be85 182 Pfam PF01569 PAP2 superfamily 67 177 4.6E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEJY3_01700 3d9ea0e4362b9988559d2f7cb7e2be85 182 SUPERFAMILY SSF48317 11 178 1.06E-36 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEJY3_01700 3d9ea0e4362b9988559d2f7cb7e2be85 182 Gene3D G3DSA:1.20.144.10 96 181 8.4E-17 T 14-10-2018 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 PIRSF PIRSF001467 5 180 3.7E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.0E-43 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 7.1E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 7.1E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 7.1E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 Gene3D G3DSA:2.40.100.10 18 180 2.2E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEJY3_12255 e38718f048d3b4d1f159047f43760c3f 181 SUPERFAMILY SSF50891 18 180 1.9E-52 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_16551 0487bebeb6a3cbab82dc97a0a01a19f3 271 Gene3D G3DSA:3.40.50.1000 8 271 4.1E-96 T 14-10-2018 IPR023214 HAD superfamily VEJY3_16551 0487bebeb6a3cbab82dc97a0a01a19f3 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 1.4E-8 T 14-10-2018 VEJY3_16551 0487bebeb6a3cbab82dc97a0a01a19f3 271 Gene3D G3DSA:1.10.150.240 24 102 4.1E-96 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_16551 0487bebeb6a3cbab82dc97a0a01a19f3 271 SUPERFAMILY SSF56784 6 261 3.43E-53 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_16551 0487bebeb6a3cbab82dc97a0a01a19f3 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 140.942 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.224 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 14-10-2018 VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 Pfam PF00297 Ribosomal protein L3 93 182 3.0E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 SUPERFAMILY SSF50447 1 208 1.41E-84 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_01280 5d8d801db19a374a0c9ce85887aa9cd6 209 Gene3D G3DSA:2.40.50.620 32 96 3.0E-15 T 14-10-2018 VEJY3_09030 a4e545964af1d7096bb5d57dcd708575 98 SUPERFAMILY SSF54909 2 98 2.15E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_09030 a4e545964af1d7096bb5d57dcd708575 98 SMART SM00886 2 98 3.2E-27 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel VEJY3_09030 a4e545964af1d7096bb5d57dcd708575 98 Gene3D G3DSA:3.30.70.100 1 98 1.6E-31 T 14-10-2018 VEJY3_09030 a4e545964af1d7096bb5d57dcd708575 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 98 2.6E-26 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 14-10-2018 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 SMART SM01390 3 95 6.8E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 SMART SM00363 96 160 1.4E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 Gene3D G3DSA:3.10.290.10 103 191 2.0E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.349 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VEJY3_01400 c91a40ff19cdb929fdfb06159b288713 206 SUPERFAMILY SSF55174 3 206 1.15E-72 T 14-10-2018 VEJY3_08570 df2df5212ed6dd506f6d66d6ec3b08e0 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 376 8.1E-116 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_08570 df2df5212ed6dd506f6d66d6ec3b08e0 389 SUPERFAMILY SSF56796 6 386 3.27E-118 T 14-10-2018 VEJY3_08570 df2df5212ed6dd506f6d66d6ec3b08e0 389 Gene3D G3DSA:3.40.50.1970 1 183 1.6E-53 T 14-10-2018 VEJY3_08570 df2df5212ed6dd506f6d66d6ec3b08e0 389 Gene3D G3DSA:1.20.1090.10 185 387 1.5E-62 T 14-10-2018 VEJY3_04400 faae0d574f8f33e5f7a953f23258951f 305 SUPERFAMILY SSF161098 18 298 7.2E-54 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04400 faae0d574f8f33e5f7a953f23258951f 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 299 6.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04400 faae0d574f8f33e5f7a953f23258951f 305 Gene3D G3DSA:1.10.3720.10 17 302 6.6E-52 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18636 3b0730a0bc8ce7016a9469087f8de60a 155 Gene3D G3DSA:3.30.300.20 1 155 3.3E-49 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_18636 3b0730a0bc8ce7016a9469087f8de60a 155 Pfam PF02566 OsmC-like protein 55 151 2.3E-15 T 14-10-2018 IPR003718 OsmC/Ohr family VEJY3_18636 3b0730a0bc8ce7016a9469087f8de60a 155 SUPERFAMILY SSF82784 1 152 3.01E-47 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VEJY3_00935 b1fca96ad08734d036844023c16189d7 282 SUPERFAMILY SSF53448 6 192 3.04E-9 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_00935 b1fca96ad08734d036844023c16189d7 282 Gene3D G3DSA:3.90.550.10 3 210 7.7E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 SMART SM00387 355 465 8.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Gene3D G3DSA:1.10.287.130 199 312 1.0E-33 T 14-10-2018 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Gene3D G3DSA:3.30.565.10 314 464 1.9E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Pfam PF00672 HAMP domain 196 243 4.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 SMART SM00388 249 311 9.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 2.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 2.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 2.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 2.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Gene3D G3DSA:3.30.450.210 37 162 1.6E-51 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 42 173 6.6E-56 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 SUPERFAMILY SSF47384 235 311 1.63E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 SUPERFAMILY SSF55874 301 463 1.83E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 310 7.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 464 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_14540 38bc9c7ea612cf7e0fa977309d767a07 465 SMART SM00304 195 248 2.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_20721 1be806bba17324c36c380f1803991bbe 217 SUPERFAMILY SSF116726 134 213 3.66E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_20721 1be806bba17324c36c380f1803991bbe 217 Gene3D G3DSA:3.40.50.720 1 137 4.6E-32 T 14-10-2018 VEJY3_20721 1be806bba17324c36c380f1803991bbe 217 SUPERFAMILY SSF51735 3 133 1.64E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_20721 1be806bba17324c36c380f1803991bbe 217 Pfam PF02254 TrkA-N domain 5 119 2.3E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_20721 1be806bba17324c36c380f1803991bbe 217 Gene3D G3DSA:3.30.70.1450 138 213 1.8E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 Pfam PF00464 Serine hydroxymethyltransferase 8 385 6.6E-181 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 52.968 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 Gene3D G3DSA:3.90.1150.10 11 392 7.5E-189 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 Gene3D G3DSA:3.40.640.10 37 288 7.5E-189 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 PIRSF PIRSF000412 1 420 6.0E-170 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_21541 b6eb4ed7eb3196b7db2256f99c06fa84 420 SUPERFAMILY SSF53383 3 419 1.5E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 Gene3D G3DSA:3.40.50.300 1 201 2.1E-41 T 14-10-2018 VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 SMART SM00382 26 205 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 Pfam PF00005 ABC transporter 18 158 2.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.0E-77 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VEJY3_11450 9754604a2fa3a26ed877a962df75de5c 205 SUPERFAMILY SSF52540 2 189 1.3E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18711 ec7ca098887676c72e391a2a8f8c30b7 72 Gene3D G3DSA:2.40.50.240 2 69 1.6E-21 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily VEJY3_18711 ec7ca098887676c72e391a2a8f8c30b7 72 Pfam PF06988 NifT/FixU protein 1 66 2.0E-22 T 14-10-2018 IPR009727 NifT/FixU GO:0009399 VEJY3_18711 ec7ca098887676c72e391a2a8f8c30b7 72 SUPERFAMILY SSF159203 3 69 1.96E-17 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Pfam PF00912 Transglycosylase 190 360 3.2E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Gene3D G3DSA:1.10.3810.10 182 385 6.6E-262 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Gene3D G3DSA:3.40.710.10 84 741 6.6E-262 T 14-10-2018 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 SUPERFAMILY SSF53955 187 383 8.44E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Gene3D G3DSA:3.30.2060.10 92 181 6.6E-262 T 14-10-2018 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 5.2E-24 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 PIRSF PIRSF002799 4 790 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 3.5E-27 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_12920 35b49eac4e55cb171c24dd97e4079ce8 790 SUPERFAMILY SSF56601 343 775 2.82E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_23906 808878fc30c86840e7f5a4c0505e66b5 498 Gene3D G3DSA:3.40.309.10 248 450 1.4E-151 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_23906 808878fc30c86840e7f5a4c0505e66b5 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_23906 808878fc30c86840e7f5a4c0505e66b5 498 Pfam PF00171 Aldehyde dehydrogenase family 17 477 7.8E-139 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_23906 808878fc30c86840e7f5a4c0505e66b5 498 SUPERFAMILY SSF53720 3 483 2.75E-143 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_23906 808878fc30c86840e7f5a4c0505e66b5 498 Gene3D G3DSA:3.40.605.10 22 458 1.4E-151 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_13075 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.052 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13075 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_13075 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13075 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13075 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Pfam PF03473 MOSC domain 139 262 1.1E-30 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 3.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 3.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 3.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 3.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 535 597 4.7E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 SUPERFAMILY SSF63380 276 381 6.45E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 SUPERFAMILY SSF52343 368 508 3.01E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 4.9E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 4.9E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 4.9E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 4.9E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 4.9E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 SUPERFAMILY SSF50800 7 264 2.41E-14 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 SUPERFAMILY SSF141673 6 133 2.88E-30 T 14-10-2018 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Pfam PF03476 MOSC N-terminal beta barrel domain 6 118 2.1E-29 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 1.5E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 9.5E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Gene3D G3DSA:2.40.30.10 279 378 1.9E-24 T 14-10-2018 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Gene3D G3DSA:3.40.50.80 382 506 2.1E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 Gene3D G3DSA:3.10.20.30 507 605 7.6E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_22456 3987b5cc8ecb0971a6f886f94501b783 605 SUPERFAMILY SSF54292 501 604 8.78E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_17971 0336fd2e9555a671936fb18a1f7ebd30 324 Pfam PF12224 Putative amidoligase enzyme 16 276 4.6E-72 T 14-10-2018 IPR022025 Putative amidoligase enzyme VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 SUPERFAMILY SSF47336 220 290 2.88E-10 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PIRSF PIRSF001111 1 292 5.0E-126 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 Pfam PF00857 Isochorismatase family 30 203 1.0E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 Gene3D G3DSA:3.40.50.850 1 209 6.3E-76 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 61 78 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 2 14 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 110 132 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 78 97 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 184 201 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 PRINTS PR01398 Isochorismatase signature 166 184 4.2E-46 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 SUPERFAMILY SSF52499 9 208 2.22E-59 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 Pfam PF00550 Phosphopantetheine attachment site 227 282 2.5E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEJY3_04080 eadd9b33a390c4affe4b3809c0fc5617 292 Gene3D G3DSA:1.10.1200.10 216 291 4.7E-25 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 Gene3D G3DSA:1.20.1050.10 183 327 2.3E-55 T 14-10-2018 VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 Gene3D G3DSA:3.40.30.130 1 182 1.2E-68 T 14-10-2018 VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 2.9E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 PIRSF PIRSF015753 3 322 5.7E-113 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 SUPERFAMILY SSF52833 41 160 5.49E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 SUPERFAMILY SSF47616 168 297 1.09E-27 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_06145 3732253aadda622d8640a3b89ee56dee 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 275 4.5E-13 T 14-10-2018 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 SMART SM00245 326 527 8.6E-62 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 6.1E-38 T 14-10-2018 IPR020992 Tail specific protease, C-terminal VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 SMART SM00228 246 323 8.5E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Pfam PF03572 Peptidase family S41 356 525 2.7E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 2.7E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Gene3D G3DSA:3.90.226.10 323 544 8.8E-58 T 14-10-2018 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 SUPERFAMILY SSF52096 166 531 1.82E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Gene3D G3DSA:2.30.42.10 236 320 7.3E-11 T 14-10-2018 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 SUPERFAMILY SSF50156 217 336 1.3E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 3.9E-112 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VEJY3_07620 4c5d68305b83e77c42f0057acbb08bf3 668 Pfam PF08180 B melanoma antigen family 9 35 1.2E-13 T 14-10-2018 IPR012530 B melanoma antigen-like VEJY3_19696 eb3268e87998780a6c96af34285f7d99 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEJY3_19696 eb3268e87998780a6c96af34285f7d99 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 9.4E-181 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VEJY3_19696 eb3268e87998780a6c96af34285f7d99 706 Pfam PF03477 ATP cone domain 4 89 4.3E-22 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEJY3_19696 eb3268e87998780a6c96af34285f7d99 706 SUPERFAMILY SSF51998 121 687 3.89E-193 T 14-10-2018 VEJY3_19696 eb3268e87998780a6c96af34285f7d99 706 Gene3D G3DSA:3.20.70.20 121 687 4.1E-233 T 14-10-2018 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 SMART SM00020 20 311 6.6E-27 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 SUPERFAMILY SSF50494 34 315 1.54E-39 T 14-10-2018 IPR009003 Peptidase S1, PA clan VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 Pfam PF00089 Trypsin 29 311 8.4E-29 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 Gene3D G3DSA:2.40.10.10 155 314 5.6E-23 T 14-10-2018 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 48 63 6.8E-16 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 259 271 6.8E-16 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 6.8E-16 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 58 63 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 260 271 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEJY3_02680 edefb5c6b9a248bb733bd07c533da750 382 Gene3D G3DSA:2.40.10.10 41 154 1.4E-18 T 14-10-2018 VEJY3_01320 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01320 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-31 T 14-10-2018 VEJY3_01320 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01320 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01320 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Gene3D G3DSA:2.40.50.140 657 747 1.6E-14 T 14-10-2018 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Pfam PF00773 RNB domain 261 593 4.5E-107 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 ProSitePatterns PS01175 Ribonuclease II family signature. 561 585 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Pfam PF08206 Ribonuclease B OB domain 88 145 5.7E-15 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SMART SM00357 87 146 1.2E-4 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SMART SM00316 660 741 1.3E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SMART SM00955 261 594 4.6E-170 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SUPERFAMILY SSF50249 68 148 2.36E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Pfam PF00575 S1 RNA binding domain 658 739 6.7E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SUPERFAMILY SSF50249 222 658 1.26E-133 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Hamap MF_01895 Ribonuclease R [rnr]. 39 741 49.636 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 Gene3D G3DSA:2.40.50.140 72 148 4.2E-13 T 14-10-2018 VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SUPERFAMILY SSF50249 142 236 8.22E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17021 7d08eb0c617ec5bf5a203722cb75fc10 750 SUPERFAMILY SSF50249 662 736 4.62E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 SUPERFAMILY SSF55874 447 567 4.98E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 569 1.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Gene3D G3DSA:1.10.287.130 174 280 4.3E-7 T 14-10-2018 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 PIRSF PIRSF003167 2 577 5.0E-180 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 2.5E-21 T 14-10-2018 IPR029095 NarX-like, N-terminal VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 SUPERFAMILY SSF158472 176 225 4.58E-8 T 14-10-2018 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 SMART SM00387 478 571 7.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Pfam PF07730 Histidine kinase 369 437 6.5E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 SMART SM00304 176 228 2.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Gene3D G3DSA:3.30.565.10 438 575 2.9E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Gene3D G3DSA:1.20.120.960 40 148 2.1E-12 T 14-10-2018 VEJY3_17651 232e136eb484fe4848cab1868803b6a0 578 Pfam PF00672 HAMP domain 176 223 9.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 SUPERFAMILY SSF53720 2 478 8.25E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 Pfam PF00171 Aldehyde dehydrogenase family 12 474 4.8E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 Gene3D G3DSA:3.40.309.10 251 444 1.4E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_09240 936db7f22335fdd5d73e47e1fe29e493 480 Gene3D G3DSA:3.40.605.10 22 473 1.4E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_11645 bcef5b03a8632bd2c84f4706977f9973 300 SUPERFAMILY SSF54909 3 297 8.04E-93 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_11645 bcef5b03a8632bd2c84f4706977f9973 300 Pfam PF04261 Dyp-type peroxidase family 5 293 2.7E-88 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VEJY3_16666 2c75709053fee47f416f5e3de7129945 559 Pfam PF16130 Domain of unknown function (DUF4842) 325 545 8.2E-54 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 VEJY3_16666 2c75709053fee47f416f5e3de7129945 559 Pfam PF13448 Domain of unknown function (DUF4114) 161 248 5.0E-22 T 14-10-2018 IPR025193 Domain of unknown function DUF4114 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 31.979 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 Gene3D G3DSA:3.40.50.620 2 317 2.2E-134 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 SUPERFAMILY SSF48163 302 465 1.27E-44 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 6.2E-116 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 SUPERFAMILY SSF52374 3 301 9.12E-110 T 14-10-2018 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 Gene3D G3DSA:1.10.10.350 369 473 3.5E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEJY3_03490 b735048c4ed971b35fe2cedd58a9ea19 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_18256 9816977477d763a6afaa6f1c752d4c90 461 SUPERFAMILY SSF51556 90 393 1.44E-97 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_18256 9816977477d763a6afaa6f1c752d4c90 461 Pfam PF01979 Amidohydrolase family 88 449 2.5E-71 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_18256 9816977477d763a6afaa6f1c752d4c90 461 Gene3D G3DSA:2.30.40.10 27 444 3.4E-194 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_18256 9816977477d763a6afaa6f1c752d4c90 461 Gene3D G3DSA:3.20.20.140 91 408 3.4E-194 T 14-10-2018 VEJY3_18256 9816977477d763a6afaa6f1c752d4c90 461 SUPERFAMILY SSF51338 50 453 4.13E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_22726 5d2911e9afa2c412ccb7f2162771b431 445 Pfam PF13520 Amino acid permease 12 411 1.6E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_22726 5d2911e9afa2c412ccb7f2162771b431 445 Gene3D G3DSA:1.20.1740.10 6 445 1.9E-82 T 14-10-2018 VEJY3_22726 5d2911e9afa2c412ccb7f2162771b431 445 PIRSF PIRSF006060 1 444 9.1E-76 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_08735 a716e5ed1380dfa91cdd1ee0aed5d88a 401 Pfam PF13439 Glycosyltransferase Family 4 16 172 2.4E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_08735 a716e5ed1380dfa91cdd1ee0aed5d88a 401 Pfam PF00534 Glycosyl transferases group 1 184 341 1.9E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_08735 a716e5ed1380dfa91cdd1ee0aed5d88a 401 Gene3D G3DSA:3.40.50.2000 170 352 1.4E-64 T 14-10-2018 VEJY3_08735 a716e5ed1380dfa91cdd1ee0aed5d88a 401 Gene3D G3DSA:3.40.50.2000 16 362 1.4E-64 T 14-10-2018 VEJY3_08735 a716e5ed1380dfa91cdd1ee0aed5d88a 401 SUPERFAMILY SSF53756 1 370 3.38E-76 T 14-10-2018 VEJY3_12780 0976aafc66899de029190a092101e232 360 Gene3D G3DSA:2.40.50.100 77 205 5.4E-50 T 14-10-2018 VEJY3_12780 0976aafc66899de029190a092101e232 360 Gene3D G3DSA:2.40.30.170 66 285 5.4E-50 T 14-10-2018 VEJY3_12780 0976aafc66899de029190a092101e232 360 Gene3D G3DSA:2.40.420.20 286 353 5.4E-50 T 14-10-2018 VEJY3_12780 0976aafc66899de029190a092101e232 360 Gene3D G3DSA:1.10.287.470 112 171 5.4E-50 T 14-10-2018 VEJY3_12780 0976aafc66899de029190a092101e232 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 270 6.9E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_12780 0976aafc66899de029190a092101e232 360 SUPERFAMILY SSF111369 66 280 5.75E-30 T 14-10-2018 VEJY3_07920 de0cbab8ed1f34bbaa430e6b28e3f4e6 239 Gene3D G3DSA:3.40.50.1360 1 238 4.7E-88 T 14-10-2018 VEJY3_07920 de0cbab8ed1f34bbaa430e6b28e3f4e6 239 SUPERFAMILY SSF100950 3 237 1.05E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_07920 de0cbab8ed1f34bbaa430e6b28e3f4e6 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 7.6E-61 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 SUPERFAMILY SSF141371 25 135 3.4E-32 T 14-10-2018 VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 SUPERFAMILY SSF141371 136 243 2.22E-29 T 14-10-2018 VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 Pfam PF12945 Flagellar protein YcgR 36 125 9.0E-14 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 Gene3D G3DSA:2.40.10.220 135 244 9.9E-37 T 14-10-2018 VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 Gene3D G3DSA:2.30.110.10 21 134 3.0E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_23441 25f398f59cd9b0cca9c11db6cbd18fe2 244 Pfam PF07238 PilZ domain 132 230 1.8E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VEJY3_14340 22b4939874066c42085483dd46e4c770 326 PIRSF PIRSF005651 1 326 3.1E-95 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VEJY3_14340 22b4939874066c42085483dd46e4c770 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.3E-29 T 14-10-2018 IPR001107 Band 7 domain VEJY3_14340 22b4939874066c42085483dd46e4c770 326 SMART SM00244 18 218 8.1E-48 T 14-10-2018 IPR001107 Band 7 domain VEJY3_14340 22b4939874066c42085483dd46e4c770 326 SUPERFAMILY SSF117892 56 223 2.09E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VEJY3_01370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VEJY3_00080 fe3e4dce828cd08a69b5effeb02c373f 145 SUPERFAMILY SSF49764 6 137 3.84E-22 T 14-10-2018 IPR008978 HSP20-like chaperone VEJY3_00080 fe3e4dce828cd08a69b5effeb02c373f 145 Gene3D G3DSA:2.60.40.790 34 137 3.1E-21 T 14-10-2018 IPR008978 HSP20-like chaperone VEJY3_00080 fe3e4dce828cd08a69b5effeb02c373f 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 1.4E-17 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VEJY3_10580 5dcd9976c7390d387e9c0d96efe29303 230 Pfam PF00154 recA bacterial DNA recombination protein 34 124 5.8E-5 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEJY3_10580 5dcd9976c7390d387e9c0d96efe29303 230 Gene3D G3DSA:3.40.50.300 52 158 4.3E-26 T 14-10-2018 VEJY3_10580 5dcd9976c7390d387e9c0d96efe29303 230 SUPERFAMILY SSF52540 49 159 2.83E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10580 5dcd9976c7390d387e9c0d96efe29303 230 PIRSF PIRSF037290 1 230 2.1E-72 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VEJY3_02520 775955a1a048da841fc7334c66aba750 242 Gene3D G3DSA:1.25.40.10 28 242 2.4E-53 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_02520 775955a1a048da841fc7334c66aba750 242 Pfam PF13525 Outer membrane lipoprotein 26 232 4.1E-80 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VEJY3_02520 775955a1a048da841fc7334c66aba750 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.221 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VEJY3_02520 775955a1a048da841fc7334c66aba750 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 3.6E-79 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VEJY3_02520 775955a1a048da841fc7334c66aba750 242 SUPERFAMILY SSF48452 30 119 7.83E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 SUPERFAMILY SSF55031 210 325 3.74E-25 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 PIRSF PIRSF001235 2 414 8.8E-126 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 Pfam PF07687 Peptidase dimerisation domain 207 313 4.7E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 8 407 9.4E-110 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 SUPERFAMILY SSF53187 3 408 2.45E-71 T 14-10-2018 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 Gene3D G3DSA:3.40.630.10 23 404 9.8E-128 T 14-10-2018 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 Gene3D G3DSA:3.30.70.360 210 327 9.8E-128 T 14-10-2018 VEJY3_06760 695b68243e86bbad32fdb51cd3d5ea12 417 Pfam PF01546 Peptidase family M20/M25/M40 77 407 1.8E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_01455 6ce7e859bf55daeaaa9332f323e475f9 302 PIRSF PIRSF002936 1 302 1.8E-155 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEJY3_01455 6ce7e859bf55daeaaa9332f323e475f9 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.7E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VEJY3_01455 6ce7e859bf55daeaaa9332f323e475f9 302 SUPERFAMILY SSF52402 6 209 3.49E-74 T 14-10-2018 VEJY3_01455 6ce7e859bf55daeaaa9332f323e475f9 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.059 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEJY3_01455 6ce7e859bf55daeaaa9332f323e475f9 302 Gene3D G3DSA:3.40.50.620 7 212 1.7E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 SMART SM00028 172 205 48.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 SMART SM00028 208 241 0.26 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Pfam PF13174 Tetratricopeptide repeat 209 241 4.5E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.511 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 SUPERFAMILY SSF48452 143 246 3.04E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Pfam PF16331 TolA binding protein trimerisation 43 114 1.5E-23 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Gene3D G3DSA:1.20.5.110 40 119 2.6E-21 T 14-10-2018 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Gene3D G3DSA:1.25.40.10 134 251 6.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_04945 aec674254f11e77005bcfb2b65f0f459 251 Pfam PF13432 Tetratricopeptide repeat 146 194 9.9E-7 T 14-10-2018 VEJY3_05425 f055534f332a3766988b5513813e9968 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 3.1E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VEJY3_05425 f055534f332a3766988b5513813e9968 449 SMART SM00382 50 166 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05425 f055534f332a3766988b5513813e9968 449 Pfam PF16193 AAA C-terminal domain 192 268 3.1E-20 T 14-10-2018 IPR032423 AAA C-terminal domain VEJY3_05425 f055534f332a3766988b5513813e9968 449 SUPERFAMILY SSF52540 11 235 4.22E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05425 f055534f332a3766988b5513813e9968 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 8.0E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_05425 f055534f332a3766988b5513813e9968 449 Gene3D G3DSA:1.20.272.10 242 346 8.0E-44 T 14-10-2018 VEJY3_05425 f055534f332a3766988b5513813e9968 449 Gene3D G3DSA:1.10.8.60 166 241 1.9E-22 T 14-10-2018 VEJY3_05425 f055534f332a3766988b5513813e9968 449 Gene3D G3DSA:3.40.50.300 4 165 2.6E-48 T 14-10-2018 VEJY3_05425 f055534f332a3766988b5513813e9968 449 SUPERFAMILY SSF48019 253 435 3.4E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEJY3_05425 f055534f332a3766988b5513813e9968 449 Gene3D G3DSA:1.10.3710.10 347 448 1.2E-36 T 14-10-2018 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 SUPERFAMILY SSF46785 3 69 1.21E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 Gene3D G3DSA:3.40.1410.10 70 228 1.4E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 SUPERFAMILY SSF64288 53 229 2.04E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 8.6E-120 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 SMART SM00345 6 65 4.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 SMART SM00866 86 225 1.2E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 Pfam PF07702 UTRA domain 86 224 4.4E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16586 12a32b199341bba1f5c64fc18eb74727 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 Gene3D G3DSA:1.25.40.10 27 165 1.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 SMART SM00028 274 307 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 SMART SM00028 336 369 6.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 SMART SM00028 100 133 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 SUPERFAMILY SSF48452 93 229 1.52E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 SUPERFAMILY SSF48452 245 369 1.39E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16311 a1012faddbddef7347faf3ac9b2b82ef 390 Gene3D G3DSA:1.25.40.10 166 390 7.5E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 SUPERFAMILY SSF55326 3 137 3.66E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.549 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 8.1E-8 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 SUPERFAMILY SSF56042 141 307 7.48E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 PIRSF PIRSF005303 1 320 9.3E-80 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 Gene3D G3DSA:3.90.650.10 144 320 1.1E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 3.5E-101 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.6E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VEJY3_03150 ca046fec87b70a812254ec238fda5c4f 321 Gene3D G3DSA:3.30.1330.10 1 143 5.6E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_02290 3245b88e29c339ae7aafb4740d729baf 436 Pfam PF05525 Branched-chain amino acid transport protein 8 426 7.8E-150 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEJY3_07520 3283bf497bb757743a59bb8957b947f7 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 1.4E-12 T 14-10-2018 IPR000182 GNAT domain VEJY3_07520 3283bf497bb757743a59bb8957b947f7 156 Gene3D G3DSA:3.40.630.30 7 152 9.8E-22 T 14-10-2018 VEJY3_07520 3283bf497bb757743a59bb8957b947f7 156 SUPERFAMILY SSF55729 3 144 3.32E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_13550 15fc0968d3fd8cf16ace5a560bf1a282 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 9.8E-101 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.8E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.195 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEJY3_00460 29c4d921ecb214e5de944efa722b6754 248 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VEJY3_23396 728afa6e2d1f298fdd6fa633fab86df4 125 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VEJY3_23396 728afa6e2d1f298fdd6fa633fab86df4 125 PIRSF PIRSF028770 1 125 3.3E-70 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VEJY3_12180 c3abc18d63b7de8aa9d33c841f1c4dac 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 1.7E-8 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEJY3_12180 c3abc18d63b7de8aa9d33c841f1c4dac 159 SUPERFAMILY SSF54534 83 158 8.5E-10 T 14-10-2018 VEJY3_12180 c3abc18d63b7de8aa9d33c841f1c4dac 159 Gene3D G3DSA:3.10.50.30 76 159 5.3E-8 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Pfam PF00890 FAD binding domain 9 405 1.1E-117 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Gene3D G3DSA:1.20.58.100 431 547 6.2E-38 T 14-10-2018 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 SUPERFAMILY SSF51905 5 428 3.77E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 SUPERFAMILY SSF46977 452 588 9.94E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 4.9E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Gene3D G3DSA:3.90.700.10 246 350 1.2E-169 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Gene3D G3DSA:4.10.80.40 548 588 1.2E-23 T 14-10-2018 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 Gene3D G3DSA:3.50.50.60 9 416 1.2E-169 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03845 1a79cb66696205b5bb85632d73e60a2a 588 PIRSF PIRSF000171 1 580 1.7E-48 T 14-10-2018 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.6E-54 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 Gene3D G3DSA:1.10.520.20 2 106 2.9E-38 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.6E-64 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.1E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 2.1E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 2.1E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.1E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.1E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.041 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 SUPERFAMILY SSF47928 3 105 2.48E-28 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15465 e498b6c94d461ce99106c43b15cf6adb 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Gene3D G3DSA:3.20.20.60 234 574 8.0E-125 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 SUPERFAMILY SSF52009 125 243 2.75E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Gene3D G3DSA:1.10.274.10 21 146 2.7E-80 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 7.1E-33 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Gene3D G3DSA:3.50.30.10 4 233 2.7E-80 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 14-10-2018 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 3.5E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 SUPERFAMILY SSF51621 249 549 1.41E-109 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 3.6E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 PIRSF PIRSF000732 1 574 1.4E-218 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VEJY3_03610 5b10df172f59082e5b02c34ebb47e341 574 SUPERFAMILY SSF47831 24 143 9.29E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 SUPERFAMILY SSF51556 85 524 2.97E-21 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 Pfam PF07969 Amidohydrolase family 74 564 2.6E-119 T 14-10-2018 IPR013108 Amidohydrolase 3 VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 SUPERFAMILY SSF51338 15 565 1.11E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 Gene3D G3DSA:3.20.20.140 86 523 2.2E-132 T 14-10-2018 VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 Gene3D G3DSA:3.10.310.70 104 221 2.2E-132 T 14-10-2018 VEJY3_06550 8be6f6bcc61afac2f0ad984973b16ec7 599 Gene3D G3DSA:2.30.40.10 34 539 2.2E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 SUPERFAMILY SSF51735 1 268 3.22E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.562 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 Gene3D G3DSA:3.40.50.720 3 264 2.5E-101 T 14-10-2018 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 Gene3D G3DSA:3.30.360.10 127 234 2.5E-101 T 14-10-2018 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 PIRSF PIRSF000161 1 268 5.5E-89 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.1E-40 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.9E-44 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEJY3_02125 98dc2860266b92104c36521589d7c31f 269 SUPERFAMILY SSF55347 127 236 8.94E-38 T 14-10-2018 VEJY3_01970 7f77614c1d94f13f6d65e5f71c26217a 367 Gene3D G3DSA:3.40.50.300 8 191 4.5E-23 T 14-10-2018 VEJY3_01970 7f77614c1d94f13f6d65e5f71c26217a 367 Pfam PF03969 AFG1-like ATPase 1 364 6.6E-154 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VEJY3_01970 7f77614c1d94f13f6d65e5f71c26217a 367 SUPERFAMILY SSF52540 60 193 2.63E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01970 7f77614c1d94f13f6d65e5f71c26217a 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.27 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 2.0E-65 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 3.0E-216 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 4.2E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 SUPERFAMILY SSF55424 337 451 2.06E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 SUPERFAMILY SSF51905 1 361 5.48E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.4E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 Gene3D G3DSA:3.50.50.60 5 315 7.5E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PIRSF PIRSF000350 1 445 2.4E-83 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 Gene3D G3DSA:3.30.390.30 339 451 2.4E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 Gene3D G3DSA:3.50.50.60 144 261 7.5E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.5E-29 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.5E-29 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.5E-29 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.5E-29 T 14-10-2018 VEJY3_00265 674786ce3beb8aef35f587177bbd695b 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.5E-29 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 392 435 9.8E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 101 145 0.0016 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 208 249 3.0E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 295 347 1.7E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 587 630 1.6E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF10531 SLBB domain 492 535 2.4E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 479 573 4.1E-17 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 384 470 3.0E-11 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 285 374 1.1E-16 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 198 284 3.3E-16 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 579 668 2.5E-19 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.10.560.10 98 178 2.6E-15 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Gene3D G3DSA:3.30.1950.10 39 97 2.6E-15 T 14-10-2018 VEJY3_08705 dfb6ccf8a11da6c5a15af117c73717f3 697 Pfam PF02563 Polysaccharide biosynthesis/export protein 21 86 1.0E-10 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 SUPERFAMILY SSF161098 282 535 2.51E-38 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 SUPERFAMILY SSF161098 7 257 6.28E-45 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 533 2.5E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 2.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 Gene3D G3DSA:1.10.3720.10 9 267 1.3E-53 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_12870 d3b9b471b2aa34ae4415c126197da86c 541 Gene3D G3DSA:1.10.3720.10 285 540 5.4E-34 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_17711 7f67cea2ef8d2f274cea741b51f6893b 350 Gene3D G3DSA:3.20.20.70 1 349 1.2E-165 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17711 7f67cea2ef8d2f274cea741b51f6893b 350 Pfam PF00793 DAHP synthetase I family 40 337 4.8E-106 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEJY3_17711 7f67cea2ef8d2f274cea741b51f6893b 350 PIRSF PIRSF001361 1 350 2.0E-161 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEJY3_17711 7f67cea2ef8d2f274cea741b51f6893b 350 SUPERFAMILY SSF51569 6 347 2.93E-137 T 14-10-2018 VEJY3_02425 07fc121ba658c69d27f48d88ff3c6021 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.278 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VEJY3_02425 07fc121ba658c69d27f48d88ff3c6021 317 Gene3D G3DSA:3.40.1010.20 97 198 5.3E-109 T 14-10-2018 VEJY3_02425 07fc121ba658c69d27f48d88ff3c6021 317 Pfam PF02401 LytB protein 3 284 6.0E-93 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VEJY3_02425 07fc121ba658c69d27f48d88ff3c6021 317 Gene3D G3DSA:3.40.50.11270 12 96 5.3E-109 T 14-10-2018 VEJY3_02425 07fc121ba658c69d27f48d88ff3c6021 317 Gene3D G3DSA:3.40.1010.20 6 283 5.3E-109 T 14-10-2018 VEJY3_10490 89e66d2f70ceb108d93a5a476b28c535 349 SUPERFAMILY SSF46626 53 163 7.22E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10490 89e66d2f70ceb108d93a5a476b28c535 349 SUPERFAMILY SSF46626 206 311 5.53E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10490 89e66d2f70ceb108d93a5a476b28c535 349 Gene3D G3DSA:1.10.760.10 208 324 6.5E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10490 89e66d2f70ceb108d93a5a476b28c535 349 Gene3D G3DSA:1.10.760.10 35 160 4.7E-35 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10490 89e66d2f70ceb108d93a5a476b28c535 349 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 300 7.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_22341 90386cf4790d209b2400f931bc485253 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 180 210 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VEJY3_22341 90386cf4790d209b2400f931bc485253 285 Gene3D G3DSA:3.30.470.10 1 119 5.1E-34 T 14-10-2018 VEJY3_22341 90386cf4790d209b2400f931bc485253 285 SUPERFAMILY SSF56752 4 278 8.63E-78 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VEJY3_22341 90386cf4790d209b2400f931bc485253 285 Gene3D G3DSA:3.20.10.10 123 283 7.4E-51 T 14-10-2018 VEJY3_22341 90386cf4790d209b2400f931bc485253 285 Pfam PF01063 Amino-transferase class IV 32 255 7.9E-47 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VEJY3_04635 9749e669350ab309d2fd4114f2ed4a22 226 Gene3D G3DSA:1.10.3720.10 1 218 9.1E-50 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04635 9749e669350ab309d2fd4114f2ed4a22 226 SUPERFAMILY SSF161098 11 203 2.62E-41 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04635 9749e669350ab309d2fd4114f2ed4a22 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_21086 03f472209761db7b4c910b1d8ddfb3ab 180 Pfam PF08774 VRR-NUC domain 102 157 3.5E-6 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VEJY3_21086 03f472209761db7b4c910b1d8ddfb3ab 180 Gene3D G3DSA:3.40.1350.10 82 164 1.0E-6 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Gene3D G3DSA:1.10.8.60 377 451 3.5E-15 T 14-10-2018 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Gene3D G3DSA:3.30.450.20 82 189 4.9E-20 T 14-10-2018 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SMART SM00382 225 368 5.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SUPERFAMILY SSF52540 205 445 6.95E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Pfam PF00989 PAS fold 83 130 5.5E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SMART SM00091 80 146 1.2E-5 T 14-10-2018 IPR000014 PAS domain VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SUPERFAMILY SSF55785 81 170 9.9E-10 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SUPERFAMILY SSF55021 1 68 2.8E-6 T 14-10-2018 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 SUPERFAMILY SSF46689 461 512 8.96E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Gene3D G3DSA:3.30.70.260 1 80 1.3E-25 T 14-10-2018 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Pfam PF00158 Sigma-54 interaction domain 207 370 6.3E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Gene3D G3DSA:3.40.50.300 198 375 8.4E-57 T 14-10-2018 VEJY3_09945 944726550df9a722060e543d9ad8ead9 514 Gene3D G3DSA:1.10.10.60 458 513 4.5E-25 T 14-10-2018 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 7.9E-146 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Gene3D G3DSA:3.20.19.10 623 861 2.4E-83 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.5E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Gene3D G3DSA:3.30.499.20 8 360 5.5E-132 T 14-10-2018 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Gene3D G3DSA:1.10.1440.20 566 622 3.0E-9 T 14-10-2018 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 SUPERFAMILY SSF53732 14 598 1.96E-187 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 Gene3D G3DSA:3.30.499.10 361 565 5.2E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 SUPERFAMILY SSF52016 602 860 1.33E-67 T 14-10-2018 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_07845 14b0788d833f93cda218d021f5a1e942 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 PRINTS PR00147 DNA photolyase signature 142 158 1.6E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 PRINTS PR00147 DNA photolyase signature 325 341 1.6E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 PRINTS PR00147 DNA photolyase signature 384 398 1.6E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 PRINTS PR00147 DNA photolyase signature 345 363 1.6E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 Pfam PF00875 DNA photolyase 3 166 5.7E-46 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 Gene3D G3DSA:1.10.579.10 293 471 5.5E-80 T 14-10-2018 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 4.1E-80 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 Gene3D G3DSA:1.25.40.80 133 286 1.2E-75 T 14-10-2018 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 SUPERFAMILY SSF52425 1 183 3.14E-50 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 Gene3D G3DSA:3.40.50.620 3 204 1.2E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VEJY3_23361 b360ad8fcd67ec4564bea3e511c7a8a8 471 SUPERFAMILY SSF48173 190 470 4.58E-106 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 Gene3D G3DSA:3.40.50.300 1 289 4.2E-111 T 14-10-2018 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.8E-70 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 SUPERFAMILY SSF52540 4 286 9.13E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.4E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.4E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.4E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEJY3_14260 bf3384bb904fd78cd3f2fd69b0f8ff6d 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.4E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 376 6.9E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 Gene3D G3DSA:3.40.50.1970 1 182 2.2E-50 T 14-10-2018 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 SUPERFAMILY SSF56796 1 382 2.09E-110 T 14-10-2018 VEJY3_22266 c1d55dc0039f101c8cc60e681c44517e 385 Gene3D G3DSA:1.20.1090.10 183 384 6.8E-49 T 14-10-2018 VEJY3_13360 73d8c3fc3d017fb782ebd07c3f304251 230 Gene3D G3DSA:3.30.70.2970 41 148 2.6E-47 T 14-10-2018 VEJY3_13360 73d8c3fc3d017fb782ebd07c3f304251 230 Gene3D G3DSA:3.30.110.170 31 227 2.6E-47 T 14-10-2018 VEJY3_13360 73d8c3fc3d017fb782ebd07c3f304251 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 4.0E-39 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 5 428 3.5E-142 T 14-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 Gene3D G3DSA:3.40.50.1980 310 431 5.4E-20 T 14-10-2018 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 Gene3D G3DSA:3.40.50.1980 19 160 4.2E-35 T 14-10-2018 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 Gene3D G3DSA:3.40.50.1980 164 285 6.5E-34 T 14-10-2018 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 SUPERFAMILY SSF53807 7 435 5.23E-94 T 14-10-2018 VEJY3_18726 df383e66000e9effd91a1faf3456506b 456 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 427 2.1E-85 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 SUPERFAMILY SSF111369 45 113 9.81E-10 T 14-10-2018 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 Gene3D G3DSA:2.40.50.100 46 78 4.6E-11 T 14-10-2018 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 274 3.9E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 Gene3D G3DSA:1.10.287.470 79 95 4.6E-11 T 14-10-2018 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 Gene3D G3DSA:1.10.287.470 105 172 2.2E-9 T 14-10-2018 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 SUPERFAMILY SSF111369 181 293 5.49E-6 T 14-10-2018 VEJY3_21256 176e528a5315585bdd6cd81470c29976 352 Gene3D G3DSA:2.40.30.170 218 333 2.8E-22 T 14-10-2018 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 SUPERFAMILY SSF56601 21 277 1.29E-60 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 Gene3D G3DSA:3.40.710.10 16 279 5.0E-58 T 14-10-2018 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 Pfam PF13354 Beta-lactamase enzyme family 46 252 2.8E-30 T 14-10-2018 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_22156 8e3cdbc1859ae3e23ae98f72b21006e6 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.7E-52 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEJY3_02645 4c1de85449dd9b968f249731943fcebe 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 227 2.9E-113 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related VEJY3_02645 4c1de85449dd9b968f249731943fcebe 258 PIRSF PIRSF028756 1 258 2.5E-133 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 VEJY3_02645 4c1de85449dd9b968f249731943fcebe 258 SUPERFAMILY SSF52540 35 223 4.28E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02645 4c1de85449dd9b968f249731943fcebe 258 Gene3D G3DSA:3.40.50.300 1 239 2.0E-100 T 14-10-2018 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 Gene3D G3DSA:4.10.520.10 1 98 6.4E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 SUPERFAMILY SSF47729 3 95 3.53E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 SMART SM00411 3 92 1.6E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.604 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VEJY3_06240 936458ad6b1d021333851a8406ab6d6d 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 89 4.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 Pfam PF00155 Aminotransferase class I and II 174 483 1.7E-9 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 Gene3D G3DSA:1.10.10.10 13 90 2.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 SMART SM00345 30 89 1.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 Gene3D G3DSA:3.40.640.10 122 483 4.6E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 7.9E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 7.9E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 SUPERFAMILY SSF53383 138 490 6.22E-63 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_22276 07883c825157e9d30088bbf459c204e8 607 SUPERFAMILY SSF46785 19 91 1.87E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 SUPERFAMILY SSF53822 60 331 1.81E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.2E-43 T 14-10-2018 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 SMART SM00354 1 71 1.3E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.2 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 14-10-2018 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Gene3D G3DSA:3.40.50.2300 161 323 9.3E-92 T 14-10-2018 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Gene3D G3DSA:3.40.50.2300 69 322 9.3E-92 T 14-10-2018 VEJY3_04785 dcd7d10047dfad3195d3887397fbe30c 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82693 672 856 1.18E-26 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82714 182 272 9.02E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82693 38 132 8.11E-26 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82866 296 497 4.97E-48 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82693 565 670 2.56E-31 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82714 722 809 9.94E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82693 135 330 8.89E-24 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-108 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 SUPERFAMILY SSF82866 831 1025 1.11E-41 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 14-10-2018 VEJY3_05370 7cda9445149281b4469a3afa76d8fbe5 1052 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 14-10-2018 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Gene3D G3DSA:3.20.20.80 1 111 1.8E-50 T 14-10-2018 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Gene3D G3DSA:2.60.40.1180 481 559 1.3E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 SUPERFAMILY SSF51445 9 477 8.66E-163 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 1.8E-127 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Gene3D G3DSA:3.20.20.80 176 480 3.4E-116 T 14-10-2018 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 6.4E-8 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 SMART SM00642 18 419 5.4E-163 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 Gene3D G3DSA:3.90.400.10 112 175 7.8E-31 T 14-10-2018 VEJY3_03275 ea2e4603e52f5b69546873cc0525c860 561 SUPERFAMILY SSF51011 480 559 3.51E-16 T 14-10-2018 VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 Pfam PF00501 AMP-binding enzyme 104 533 4.9E-43 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 SUPERFAMILY SSF56801 36 633 1.31E-119 T 14-10-2018 VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 37 99 2.0E-6 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 Gene3D G3DSA:3.30.300.30 533 656 1.3E-14 T 14-10-2018 VEJY3_21806 4932b449d32946b2f89737ca73f028b9 657 Gene3D G3DSA:3.40.50.12780 69 528 2.3E-51 T 14-10-2018 VEJY3_16706 8b56c49ead16fc82d8979f436775ac50 314 SUPERFAMILY SSF46689 211 260 7.53E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_16706 8b56c49ead16fc82d8979f436775ac50 314 SUPERFAMILY SSF46689 262 312 5.38E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_16706 8b56c49ead16fc82d8979f436775ac50 314 Gene3D G3DSA:1.10.10.60 209 313 5.0E-30 T 14-10-2018 VEJY3_16706 8b56c49ead16fc82d8979f436775ac50 314 Pfam PF12833 Helix-turn-helix domain 232 312 2.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_16706 8b56c49ead16fc82d8979f436775ac50 314 SMART SM00342 226 311 2.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 104 155 8.5E-9 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Pfam PF00589 Phage integrase family 216 374 4.0E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Pfam PF13356 Arm DNA-binding domain 5 91 1.1E-15 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Gene3D G3DSA:1.10.443.10 216 387 6.9E-16 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 SUPERFAMILY SSF56349 103 384 1.27E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Gene3D G3DSA:1.10.150.130 94 209 1.8E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_05015 af3b7319653191acace2ec0bc8626522 407 Gene3D G3DSA:3.30.160.390 3 93 2.1E-21 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 Gene3D G3DSA:3.40.47.10 261 414 2.6E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 Gene3D G3DSA:3.40.47.10 1 255 1.3E-92 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 3.7E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 SMART SM00825 Beta-ketoacyl synthase 6 416 7.3E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 SUPERFAMILY SSF53901 215 414 1.54E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 SUPERFAMILY SSF53901 4 252 4.39E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.8E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEJY3_10675 e51aa41747e80aaf5a06ba060bbb5c2e 416 PIRSF PIRSF000447 1 416 3.8E-203 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VEJY3_07510 6157efde4c604ca14b40b6c8b80d58d1 568 Gene3D G3DSA:3.40.50.300 3 188 4.0E-5 T 14-10-2018 VEJY3_07510 6157efde4c604ca14b40b6c8b80d58d1 568 SUPERFAMILY SSF52540 13 244 2.26E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.0E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02855 f71de1c913d35806e7c2c743aa660cee 517 Pfam PF01235 Sodium:alanine symporter family 51 472 7.5E-149 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_16291 cc90429ffaa9aa530b996c058ba46933 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 305 425 5.9E-31 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_16291 cc90429ffaa9aa530b996c058ba46933 455 PIRSF PIRSF037714 1 450 1.9E-153 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 Gene3D G3DSA:3.40.50.360 1 172 5.3E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 SUPERFAMILY SSF52218 1 167 2.9E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 PIRSF PIRSF038996 1 171 3.4E-60 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.1E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEJY3_02295 3b2eade8535eb6f9d0ad941dec7e7ef3 172 Pfam PF00258 Flavodoxin 5 160 5.1E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 SMART SM00382 93 246 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.027 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 SUPERFAMILY SSF54211 257 456 2.77E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 Gene3D G3DSA:3.30.230.10 328 459 5.6E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 2.2E-9 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 Pfam PF13481 AAA domain 85 224 9.4E-14 T 14-10-2018 VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 SUPERFAMILY SSF52540 70 294 1.44E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12565 5cad15ee368c87f054edc3fff8edb0ca 459 Gene3D G3DSA:3.40.50.300 67 281 3.0E-38 T 14-10-2018 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 Gene3D G3DSA:1.10.10.60 1 58 9.5E-22 T 14-10-2018 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 5.5E-11 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 8.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 SUPERFAMILY SSF46689 2 76 8.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_23841 81af78a12715dd84636a41d9644552a3 203 Gene3D G3DSA:1.10.357.10 64 203 3.2E-27 T 14-10-2018 VEJY3_19896 8fe100c0b84fc531f2c93c500dddb804 477 Gene3D G3DSA:3.50.50.60 1 81 1.0E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19896 8fe100c0b84fc531f2c93c500dddb804 477 Pfam PF01134 Glucose inhibited division protein A 13 44 7.2E-5 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VEJY3_19896 8fe100c0b84fc531f2c93c500dddb804 477 SUPERFAMILY SSF51905 9 295 1.89E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 SUPERFAMILY SSF111369 50 265 7.72E-26 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Pfam PF13437 HlyD family secretion protein 154 253 7.7E-7 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Gene3D G3DSA:2.40.30.170 47 270 1.2E-67 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Gene3D G3DSA:2.40.50.100 57 189 1.2E-67 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Gene3D G3DSA:1.10.287.470 91 150 1.2E-67 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Gene3D G3DSA:2.40.420.20 272 352 1.2E-67 T 14-10-2018 VEJY3_05740 50ffc2ea314e178501285c4402804da0 361 Pfam PF13533 Biotin-lipoyl like 62 103 5.5E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Gene3D G3DSA:3.90.550.10 1 224 5.0E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 SUPERFAMILY SSF51161 252 434 6.81E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Gene3D G3DSA:2.160.10.10 225 453 1.6E-69 T 14-10-2018 VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 SUPERFAMILY SSF53448 1 249 5.63E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 1.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 330 9.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 4.9E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.375 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VEJY3_15440 48a9d42b83253aa42705b54cc5d7b71a 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_05175 0f3d579ff3c1b8c2d2305f198dbfce25 319 Pfam PF13182 Protein of unknown function (DUF4007) 10 302 4.1E-68 T 14-10-2018 IPR025248 Domain of unknown function DUF4007 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 Hamap MF_00318 Enolase [eno]. 2 417 44.32 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 SUPERFAMILY SSF51604 143 428 1.36E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 SMART SM01193 4 134 1.3E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 Gene3D G3DSA:3.30.390.10 1 127 3.3E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 SMART SM01192 143 431 1.0E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 6.5E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 PIRSF PIRSF001400 1 431 1.0E-191 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 SUPERFAMILY SSF54826 3 138 1.79E-56 T 14-10-2018 VEJY3_13215 b2d436de555cce73f72c0a3d62e5be6c 433 Gene3D G3DSA:3.20.20.120 128 433 2.9E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_22446 5f65984c459a247556f16af0fd560d28 177 Pfam PF01467 Cytidylyltransferase-like 6 144 7.1E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEJY3_22446 5f65984c459a247556f16af0fd560d28 177 Gene3D G3DSA:3.40.50.620 1 177 2.0E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_22446 5f65984c459a247556f16af0fd560d28 177 SUPERFAMILY SSF52374 1 171 5.94E-25 T 14-10-2018 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 Gene3D G3DSA:3.40.190.10 164 267 6.8E-65 T 14-10-2018 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 Gene3D G3DSA:3.40.190.10 91 281 6.8E-65 T 14-10-2018 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 Pfam PF03466 LysR substrate binding domain 89 291 4.9E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 SUPERFAMILY SSF53850 89 297 2.61E-39 T 14-10-2018 VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 SUPERFAMILY SSF46785 1 111 2.73E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 Gene3D G3DSA:1.10.10.10 1 84 2.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14080 20fd2c10f607a096c51c32ca2b287cb6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SUPERFAMILY SSF46689 144 192 3.36E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SUPERFAMILY SSF48150 303 452 6.28E-26 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SUPERFAMILY SSF46689 92 139 2.06E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Pfam PF06029 AlkA N-terminal domain 201 312 4.1E-35 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SUPERFAMILY SSF55945 201 293 1.33E-26 T 14-10-2018 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Gene3D G3DSA:1.10.340.30 313 412 2.4E-15 T 14-10-2018 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SMART SM01009 200 312 2.9E-36 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Gene3D G3DSA:1.10.10.60 86 194 1.4E-24 T 14-10-2018 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Gene3D G3DSA:3.40.10.10 5 79 2.9E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SMART SM00342 106 189 1.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Pfam PF02805 Metal binding domain of Ada 14 77 1.6E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Gene3D G3DSA:1.10.1670.10 415 455 6.7E-6 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Pfam PF12833 Helix-turn-helix domain 112 190 8.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 SUPERFAMILY SSF57884 6 91 3.14E-34 T 14-10-2018 IPR035451 Ada-like domain superfamily VEJY3_15916 0371d78fc03b1ed163d4558781642015 455 Gene3D G3DSA:3.30.310.20 201 312 7.0E-25 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 SMART SM00347 24 124 4.0E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 SUPERFAMILY SSF46785 5 136 3.82E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 Pfam PF01047 MarR family 32 88 6.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17376 4fcfd7a21eb6fdf24083e4b125be7fbc 138 Gene3D G3DSA:1.10.10.10 1 137 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:1.20.120.330 815 947 1.5E-42 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 5.1E-93 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 1.1E-97 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 SUPERFAMILY SSF81301 23 289 1.38E-86 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 SUPERFAMILY SSF81593 818 946 3.3E-32 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.1 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 SUPERFAMILY SSF81301 528 817 2.48E-88 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:1.10.4050.10 4 112 3.3E-13 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:1.20.120.1510 451 564 7.6E-33 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 1.4E-43 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 913 2.0E-6 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 SUPERFAMILY SSF81593 290 439 8.63E-42 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:3.30.460.100 565 814 2.8E-92 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:3.30.460.10 114 287 1.1E-65 T 14-10-2018 VEJY3_01910 7bc829d7140aa71547b7f3a2c4d54271 947 Gene3D G3DSA:1.20.120.330 288 443 4.1E-54 T 14-10-2018 VEJY3_10110 34c6c26470a5f80ca5b7473fe3362a0a 466 PIRSF PIRSF028099 6 466 1.5E-184 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VEJY3_10110 34c6c26470a5f80ca5b7473fe3362a0a 466 Gene3D G3DSA:1.10.760.10 320 466 3.6E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10110 34c6c26470a5f80ca5b7473fe3362a0a 466 SUPERFAMILY SSF46626 324 466 1.14E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10110 34c6c26470a5f80ca5b7473fe3362a0a 466 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 27 466 7.7E-144 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 Gene3D G3DSA:3.40.190.10 93 254 2.9E-41 T 14-10-2018 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 Gene3D G3DSA:3.40.190.10 159 249 2.9E-41 T 14-10-2018 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 Gene3D G3DSA:1.10.10.10 1 89 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 SUPERFAMILY SSF53850 90 254 6.7E-20 T 14-10-2018 VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 Pfam PF03466 LysR substrate binding domain 91 254 3.6E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 SUPERFAMILY SSF46785 1 87 3.14E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23896 b917e9eb8b7e17d59dfcbce2df896450 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 Gene3D G3DSA:3.30.70.20 176 254 3.0E-12 T 14-10-2018 VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 SUPERFAMILY SSF54862 143 504 5.59E-39 T 14-10-2018 VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 Gene3D G3DSA:3.30.70.20 415 480 4.6E-11 T 14-10-2018 VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_07215 90ec2bb0dc41840f5450cf1eab61bacd 553 Pfam PF00037 4Fe-4S binding domain 446 467 9.2E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 SUPERFAMILY SSF54631 334 388 3.93E-6 T 14-10-2018 VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 SUPERFAMILY SSF52540 42 273 5.12E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 Gene3D G3DSA:3.40.50.300 30 307 2.9E-68 T 14-10-2018 VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 Pfam PF00005 ABC transporter 43 195 1.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 Gene3D G3DSA:3.10.580.10 325 393 3.0E-5 T 14-10-2018 VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 SMART SM00382 52 253 2.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18611 f61d9d33b6b378c16906cb82d61ea7ad 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 8.3E-180 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 Pfam PF03466 LysR substrate binding domain 92 295 6.7E-29 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 Gene3D G3DSA:1.10.10.10 3 93 9.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 Gene3D G3DSA:3.40.190.290 94 298 2.9E-31 T 14-10-2018 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 SUPERFAMILY SSF53850 93 295 2.17E-28 T 14-10-2018 VEJY3_19411 2ab2c23415f5ee1a8cffed535821a7ab 304 SUPERFAMILY SSF46785 4 114 1.9E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 SUPERFAMILY SSF51306 80 202 4.01E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 Gene3D G3DSA:2.10.109.10 84 206 6.6E-44 T 14-10-2018 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.648 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VEJY3_14885 2e36c6df0fa325d444a0d061b017c4af 206 SUPERFAMILY SSF46785 3 69 3.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09675 51e0740e16fd501f97c66014cca06833 300 SUPERFAMILY SSF56349 85 291 7.65E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_09675 51e0740e16fd501f97c66014cca06833 300 Gene3D G3DSA:1.10.150.130 1 80 1.9E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_09675 51e0740e16fd501f97c66014cca06833 300 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 2 73 9.3E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_09675 51e0740e16fd501f97c66014cca06833 300 Gene3D G3DSA:1.10.443.10 83 294 7.7E-69 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_09675 51e0740e16fd501f97c66014cca06833 300 Pfam PF00589 Phage integrase family 91 291 3.0E-42 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_18101 f6605a0c96010c7c8140eae2c7acd08f 352 Gene3D G3DSA:3.10.310.10 6 349 1.2E-119 T 14-10-2018 VEJY3_18101 f6605a0c96010c7c8140eae2c7acd08f 352 SUPERFAMILY SSF54506 4 168 4.47E-62 T 14-10-2018 VEJY3_18101 f6605a0c96010c7c8140eae2c7acd08f 352 Pfam PF04303 PrpF protein 4 350 2.2E-108 T 14-10-2018 IPR007400 PrpF protein VEJY3_18101 f6605a0c96010c7c8140eae2c7acd08f 352 Gene3D G3DSA:3.10.310.10 167 335 1.2E-119 T 14-10-2018 VEJY3_18101 f6605a0c96010c7c8140eae2c7acd08f 352 SUPERFAMILY SSF54506 172 351 7.22E-54 T 14-10-2018 VEJY3_00570 599a66dda7aaa9824010ee3f59405461 314 Pfam PF03631 Virulence factor BrkB 33 280 6.8E-59 T 14-10-2018 IPR017039 Virulence factor BrkB VEJY3_00570 599a66dda7aaa9824010ee3f59405461 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 8 296 23.665 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VEJY3_00570 599a66dda7aaa9824010ee3f59405461 314 PIRSF PIRSF035875 9 293 2.8E-52 T 14-10-2018 IPR017039 Virulence factor BrkB VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 Gene3D G3DSA:1.10.10.10 1 85 3.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 SUPERFAMILY SSF46785 4 85 5.08E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 Pfam PF03466 LysR substrate binding domain 94 281 1.2E-11 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 SUPERFAMILY SSF53850 94 296 5.07E-15 T 14-10-2018 VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_21241 3904c04bf9b4b8789755e1f66c597c92 299 Gene3D G3DSA:3.40.190.290 95 291 6.9E-18 T 14-10-2018 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Pfam PF00158 Sigma-54 interaction domain 284 447 3.9E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Pfam PF02954 Bacterial regulatory protein, Fis family 554 579 1.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Gene3D G3DSA:1.10.8.60 453 520 4.1E-9 T 14-10-2018 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 SUPERFAMILY SSF46689 489 583 4.1E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 SUPERFAMILY SSF52540 284 512 5.89E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Pfam PF01590 GAF domain 76 183 9.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Gene3D G3DSA:3.40.50.300 266 452 2.1E-58 T 14-10-2018 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 564 584 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 547 564 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Gene3D G3DSA:3.30.450.40 6 188 1.6E-45 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 SMART SM00382 300 444 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07900 29ab3fa2fd5d7ecc2cc716bd4c322ece 585 Gene3D G3DSA:1.10.10.60 521 583 1.9E-9 T 14-10-2018 VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 Pfam PF11967 Recombination protein O N terminal 10 81 2.0E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 SUPERFAMILY SSF57863 91 165 4.97E-12 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 SUPERFAMILY SSF50249 10 80 5.65E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 Gene3D G3DSA:2.40.50.140 6 83 4.6E-34 T 14-10-2018 VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 Pfam PF02565 Recombination protein O C terminal 88 230 8.2E-25 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 Gene3D G3DSA:1.20.1440.120 84 241 7.6E-53 T 14-10-2018 VEJY3_13255 1d58eac4d7757cdd4120bc8eb5edcfc1 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.993 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VEJY3_06200 aa77a44d45edf076b016083e2cc15217 269 SUPERFAMILY SSF47413 6 71 1.13E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_06200 aa77a44d45edf076b016083e2cc15217 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 5.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_06200 aa77a44d45edf076b016083e2cc15217 269 Gene3D G3DSA:1.10.260.40 2 75 6.3E-6 T 14-10-2018 VEJY3_06200 aa77a44d45edf076b016083e2cc15217 269 SMART SM00530 12 66 1.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.553 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 PIRSF PIRSF001237 1 342 5.8E-143 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 Gene3D G3DSA:3.20.20.140 2 342 1.8E-111 T 14-10-2018 VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 SUPERFAMILY SSF51556 1 342 9.36E-147 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_22466 a5ba1fd33b09eb289a8ec8123d431225 342 Pfam PF01979 Amidohydrolase family 11 315 3.7E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_06345 7d5c3e0b215095804f86ea2bbf5ab5b1 266 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 266 47.856 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VEJY3_06345 7d5c3e0b215095804f86ea2bbf5ab5b1 266 Pfam PF02654 Cobalamin-5-phosphate synthase 23 257 8.1E-53 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.001 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 Gene3D G3DSA:3.30.70.890 167 285 5.6E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 1.1E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 Pfam PF08544 GHMP kinases C terminal 211 264 7.0E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 SUPERFAMILY SSF54211 11 163 2.2E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 Gene3D G3DSA:3.30.230.10 3 165 4.4E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 PIRSF PIRSF010376 9 285 5.4E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VEJY3_03400 82e197664b2015403085fe30a0fa876e 295 SUPERFAMILY SSF55060 167 282 2.78E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_23596 28efa09e37085a7f10d9e5b12b6c85e5 544 Gene3D G3DSA:1.20.1600.10 58 492 1.1E-109 T 14-10-2018 VEJY3_23596 28efa09e37085a7f10d9e5b12b6c85e5 544 Pfam PF02321 Outer membrane efflux protein 68 250 1.1E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_23596 28efa09e37085a7f10d9e5b12b6c85e5 544 Pfam PF02321 Outer membrane efflux protein 310 489 5.9E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_23596 28efa09e37085a7f10d9e5b12b6c85e5 544 SUPERFAMILY SSF56954 6 493 1.83E-92 T 14-10-2018 VEJY3_23596 28efa09e37085a7f10d9e5b12b6c85e5 544 Gene3D G3DSA:2.20.200.10 105 380 1.1E-109 T 14-10-2018 VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 Gene3D G3DSA:1.10.10.10 4 89 4.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 Pfam PF03466 LysR substrate binding domain 88 289 5.2E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 Gene3D G3DSA:3.40.190.10 92 286 9.6E-41 T 14-10-2018 VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 SUPERFAMILY SSF46785 7 88 6.22E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 SUPERFAMILY SSF53850 89 292 1.52E-28 T 14-10-2018 VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_22021 ac7d22d92c4efda8cb39b2ace7841242 295 Gene3D G3DSA:3.40.190.10 164 261 9.6E-41 T 14-10-2018 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 SMART SM01232 129 221 9.9E-46 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 SUPERFAMILY SSF81624 2 138 1.2E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 SUPERFAMILY SSF46946 130 221 1.02E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 2.2E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 SMART SM00898 2 115 3.8E-54 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.171 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Gene3D G3DSA:1.10.8.50 131 269 1.7E-47 T 14-10-2018 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.1E-32 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 SUPERFAMILY SSF57716 217 269 1.08E-16 T 14-10-2018 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.4E-26 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VEJY3_00885 eaeb9658f39276f2a62ff3982938b103 269 Gene3D G3DSA:3.20.190.10 2 128 3.0E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PIRSF PIRSF000149 1 331 6.6E-116 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 4.1E-60 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 Gene3D G3DSA:3.40.50.720 4 327 3.0E-127 T 14-10-2018 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 SUPERFAMILY SSF51735 1 173 2.01E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 SMART SM00846 3 152 6.1E-71 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.4E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 SUPERFAMILY SSF55347 152 314 1.13E-63 T 14-10-2018 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 Gene3D G3DSA:3.30.360.10 151 315 3.0E-127 T 14-10-2018 VEJY3_14990 59cc639ee47f9f22ba04a68bf649de24 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 Gene3D G3DSA:3.40.1380.10 61 207 1.5E-110 T 14-10-2018 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 SUPERFAMILY SSF52943 2 288 1.47E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.819 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 Gene3D G3DSA:1.10.287.80 6 284 1.5E-110 T 14-10-2018 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 Pfam PF00231 ATP synthase 5 287 9.0E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15455 dae7be4661c018aa7522f36ec5e72ae6 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21331 56bc92d9085fba223fda140ce72f8294 566 Gene3D G3DSA:1.20.1730.10 22 550 2.0E-123 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_21331 56bc92d9085fba223fda140ce72f8294 566 Pfam PF00474 Sodium:solute symporter family 34 443 3.7E-52 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_01510 ef488c84db2d7e455338896d2b5c6ede 67 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 6.9E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VEJY3_01510 ef488c84db2d7e455338896d2b5c6ede 67 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 64 5.0E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VEJY3_01510 ef488c84db2d7e455338896d2b5c6ede 67 Gene3D G3DSA:3.30.1910.10 2 65 1.1E-20 T 14-10-2018 VEJY3_09425 bf79422f4ed66644a4c729522a64e870 744 SUPERFAMILY SSF51445 395 735 1.81E-27 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09425 bf79422f4ed66644a4c729522a64e870 744 Gene3D G3DSA:3.20.20.80 203 742 5.1E-189 T 14-10-2018 VEJY3_09425 bf79422f4ed66644a4c729522a64e870 744 Pfam PF02449 Beta-galactosidase 457 627 2.4E-4 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_09425 bf79422f4ed66644a4c729522a64e870 744 Gene3D G3DSA:2.60.120.430 19 201 1.7E-55 T 14-10-2018 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 Gene3D G3DSA:1.10.10.60 193 243 1.6E-9 T 14-10-2018 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 SMART SM00342 210 293 1.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 SUPERFAMILY SSF51182 41 93 1.4E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 SUPERFAMILY SSF46689 246 295 8.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 Gene3D G3DSA:1.10.10.60 244 297 2.5E-15 T 14-10-2018 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 Pfam PF07883 Cupin domain 42 94 1.7E-6 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 Gene3D G3DSA:2.60.120.10 31 104 3.9E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 Pfam PF12833 Helix-turn-helix domain 216 294 5.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21466 263f910c0d1b18663d03c0b1517553b3 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_03945 47667da5b0c265686a1b1e0b624fdf6b 233 SUPERFAMILY SSF53067 111 219 7.64E-28 T 14-10-2018 VEJY3_03945 47667da5b0c265686a1b1e0b624fdf6b 233 Gene3D G3DSA:3.30.420.40 5 202 4.7E-87 T 14-10-2018 VEJY3_03945 47667da5b0c265686a1b1e0b624fdf6b 233 Gene3D G3DSA:3.30.420.40 96 190 4.7E-87 T 14-10-2018 VEJY3_03945 47667da5b0c265686a1b1e0b624fdf6b 233 SUPERFAMILY SSF53067 4 107 2.33E-32 T 14-10-2018 VEJY3_03945 47667da5b0c265686a1b1e0b624fdf6b 233 Pfam PF00814 Glycoprotease family 30 226 8.7E-33 T 14-10-2018 IPR000905 Gcp-like domain VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 Gene3D G3DSA:2.115.10.20 48 375 2.8E-98 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 Gene3D G3DSA:2.60.120.560 376 528 3.4E-26 T 14-10-2018 VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 SMART SM00640 57 489 3.5E-97 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 SUPERFAMILY SSF49899 366 526 1.03E-22 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 57 357 1.9E-74 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 395 522 1.9E-18 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VEJY3_23996 69fb74897afdf1301dfa234a63eee183 540 SUPERFAMILY SSF75005 50 367 1.13E-80 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_19606 72cde073c1d94208ea8a21de5ba45137 124 Pfam PF11756 Nitrous oxide-stimulated promoter 8 109 1.3E-46 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VEJY3_19606 72cde073c1d94208ea8a21de5ba45137 124 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 5.0E-44 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 SUPERFAMILY SSF53383 6 471 1.51E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 PIRSF PIRSF001386 3 472 3.3E-205 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 Pfam PF01212 Beta-eliminating lyase 49 437 1.7E-87 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 Gene3D G3DSA:3.90.1150.10 10 468 7.4E-197 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 Gene3D G3DSA:3.40.640.10 61 334 7.4E-197 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 97.091 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VEJY3_23856 3bdc248bf753353165861acaaf1654ea 486 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 Gene3D G3DSA:1.10.287.470 72 145 5.4E-75 T 14-10-2018 VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 262 6.7E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 Gene3D G3DSA:2.40.420.20 256 347 8.9E-20 T 14-10-2018 VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 SUPERFAMILY SSF111369 28 269 1.03E-62 T 14-10-2018 VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 Gene3D G3DSA:2.40.50.100 37 180 5.4E-75 T 14-10-2018 VEJY3_17681 cc5aab2091784cfc40d4b8c087b989cb 354 Gene3D G3DSA:2.40.30.170 31 255 5.4E-75 T 14-10-2018 VEJY3_18656 2411aa463a90e1d111bc962702183fc3 335 SMART SM00342 247 330 4.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_18656 2411aa463a90e1d111bc962702183fc3 335 Pfam PF12833 Helix-turn-helix domain 255 331 1.1E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_18656 2411aa463a90e1d111bc962702183fc3 335 SUPERFAMILY SSF46689 284 333 5.73E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_18656 2411aa463a90e1d111bc962702183fc3 335 Gene3D G3DSA:1.10.10.60 225 335 4.7E-24 T 14-10-2018 VEJY3_19381 0cd7c5a4265a31f3b6e15b832058a804 1018 SUPERFAMILY SSF52540 26 997 3.7E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19381 0cd7c5a4265a31f3b6e15b832058a804 1018 Gene3D G3DSA:3.40.50.300 703 1012 2.6E-24 T 14-10-2018 VEJY3_19381 0cd7c5a4265a31f3b6e15b832058a804 1018 Gene3D G3DSA:3.40.50.300 1 306 1.4E-43 T 14-10-2018 VEJY3_19381 0cd7c5a4265a31f3b6e15b832058a804 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 3.6E-12 T 14-10-2018 VEJY3_19381 0cd7c5a4265a31f3b6e15b832058a804 1018 Pfam PF13476 AAA domain 5 259 1.4E-27 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 Gene3D G3DSA:3.90.1150.10 13 382 1.1E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 Gene3D G3DSA:3.40.640.10 24 265 1.1E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 Pfam PF00266 Aminotransferase class-V 13 374 4.6E-91 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 SUPERFAMILY SSF53383 12 384 1.16E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_18746 8ea7a73f7a45ca924049975cf82b78bd 410 PIRSF PIRSF005572 10 390 4.7E-127 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEJY3_04720 c5a0b32d2e825708f74c72df09347070 72 SUPERFAMILY SSF50249 1 70 6.86E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_04720 c5a0b32d2e825708f74c72df09347070 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.394 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VEJY3_04720 c5a0b32d2e825708f74c72df09347070 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.1E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VEJY3_04720 c5a0b32d2e825708f74c72df09347070 72 SMART SM00316 4 72 5.4E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_04720 c5a0b32d2e825708f74c72df09347070 72 Gene3D G3DSA:2.40.50.140 1 72 5.6E-37 T 14-10-2018 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SMART SM00089 52 134 1.0 T 14-10-2018 IPR022409 PKD/Chitinase domain VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SMART SM00089 600 690 1.7E-5 T 14-10-2018 IPR022409 PKD/Chitinase domain VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SMART SM00089 702 788 0.17 T 14-10-2018 IPR022409 PKD/Chitinase domain VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:2.60.40.10 597 692 9.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SMART SM00495 798 843 1.2E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Pfam PF00704 Glycosyl hydrolases family 18 162 575 6.7E-88 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:3.20.20.80 162 577 1.2E-174 T 14-10-2018 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:2.60.40.10 695 786 9.5E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SUPERFAMILY SSF51055 785 845 3.34E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SUPERFAMILY SSF81296 21 133 7.14E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:2.60.40.10 22 132 3.5E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Pfam PF02839 Carbohydrate binding domain 815 840 7.2E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SUPERFAMILY SSF49299 596 689 1.96E-8 T 14-10-2018 IPR035986 PKD domain superfamily VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SUPERFAMILY SSF51445 135 588 4.11E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SUPERFAMILY SSF54556 461 546 5.8E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:2.10.10.20 797 841 2.2E-17 T 14-10-2018 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 SMART SM00636 159 575 5.0E-159 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Pfam PF08329 Chitinase A, N-terminal domain 21 156 2.9E-54 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEJY3_15956 14dbde9f3e755dbd60bd9905cbfcd681 849 Gene3D G3DSA:3.10.50.10 466 551 1.2E-174 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VEJY3_17996 d362d6992e95354595da2d24deee9871 319 SUPERFAMILY SSF46785 20 127 2.56E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17996 d362d6992e95354595da2d24deee9871 319 SUPERFAMILY SSF53850 105 314 9.59E-39 T 14-10-2018 VEJY3_17996 d362d6992e95354595da2d24deee9871 319 Gene3D G3DSA:3.40.190.10 179 280 3.0E-53 T 14-10-2018 VEJY3_17996 d362d6992e95354595da2d24deee9871 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 2.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17996 d362d6992e95354595da2d24deee9871 319 Gene3D G3DSA:3.40.190.10 108 307 3.0E-53 T 14-10-2018 VEJY3_17996 d362d6992e95354595da2d24deee9871 319 Pfam PF03466 LysR substrate binding domain 104 311 6.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17996 d362d6992e95354595da2d24deee9871 319 Gene3D G3DSA:1.10.10.10 19 107 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 Gene3D G3DSA:3.50.50.60 2 333 4.4E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 SUPERFAMILY SSF51905 2 370 1.17E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 9.7E-26 T 14-10-2018 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 9.7E-26 T 14-10-2018 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 9.7E-26 T 14-10-2018 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 9.7E-26 T 14-10-2018 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 9.7E-26 T 14-10-2018 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 Pfam PF01494 FAD binding domain 1 334 9.1E-78 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VEJY3_06780 1aec57fa75db4841469d613e4bbe4070 542 Gene3D G3DSA:3.30.70.2450 177 258 4.4E-83 T 14-10-2018 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 463 481 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 605 620 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 513 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 623 645 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 517 536 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 547 567 1.4E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 Gene3D G3DSA:2.130.10.120 86 420 5.4E-249 T 14-10-2018 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 Pfam PF00326 Prolyl oligopeptidase family 478 694 1.0E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 SUPERFAMILY SSF50993 14 426 1.41E-96 T 14-10-2018 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 17 418 5.4E-99 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 Gene3D G3DSA:3.40.50.1820 35 688 5.4E-249 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_16321 681ce8e0545903d09b534a0f03256f94 696 SUPERFAMILY SSF53474 428 674 3.18E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_14190 359a7a3613a871f4b431cc431f755c6b 131 SUPERFAMILY SSF75169 6 131 8.63E-37 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_14190 359a7a3613a871f4b431cc431f755c6b 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 2.4E-54 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VEJY3_14190 359a7a3613a871f4b431cc431f755c6b 131 Gene3D G3DSA:3.40.1260.10 1 131 1.3E-52 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_14190 359a7a3613a871f4b431cc431f755c6b 131 Pfam PF02635 DsrE/DsrF-like family 6 131 1.4E-25 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 SUPERFAMILY SSF111369 38 106 2.48E-7 T 14-10-2018 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 Gene3D G3DSA:1.10.287.470 73 172 4.2E-11 T 14-10-2018 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 SUPERFAMILY SSF111369 110 276 2.62E-10 T 14-10-2018 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 37 282 3.3E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 Gene3D G3DSA:2.40.50.100 39 72 4.2E-11 T 14-10-2018 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 Pfam PF00529 HlyD membrane-fusion protein of T1SS 283 316 5.0E-8 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 Gene3D G3DSA:2.40.30.170 221 336 3.2E-35 T 14-10-2018 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 70 2.2E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_23851 5a8ef9f1a0f1fb57ff6f57e862aec43e 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 2.2E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 Pfam PF01979 Amidohydrolase family 50 421 5.9E-50 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 Gene3D G3DSA:2.30.40.10 365 426 7.1E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 SUPERFAMILY SSF51556 53 371 5.53E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 SUPERFAMILY SSF51338 1 426 9.73E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 Gene3D G3DSA:2.30.40.10 3 60 2.3E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_02560 89dc21ee7cd0d2567cffeb1d6e06124b 453 Gene3D G3DSA:3.20.20.140 61 364 6.5E-85 T 14-10-2018 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 6.6E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 6.6E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 6.6E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 6.6E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 6.6E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 SUPERFAMILY SSF48113 18 430 9.14E-153 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Gene3D G3DSA:1.10.520.10 20 432 1.3E-218 T 14-10-2018 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Pfam PF00141 Peroxidase 70 398 2.3E-51 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Pfam PF00141 Peroxidase 406 698 8.1E-36 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Gene3D G3DSA:1.10.420.10 578 699 8.8E-148 T 14-10-2018 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 SUPERFAMILY SSF48113 432 723 1.37E-110 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.006 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Gene3D G3DSA:1.10.520.10 433 723 8.8E-148 T 14-10-2018 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 Gene3D G3DSA:1.10.420.20 191 399 1.3E-218 T 14-10-2018 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 8.3E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 8.3E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 8.3E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.3E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_20516 c6a9919a09537b5ff859e851cf9de3c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 8.3E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.595 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 PRINTS PR00091 Nitrogenase component II signature 9 22 1.0E-37 T 14-10-2018 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 PRINTS PR00091 Nitrogenase component II signature 86 100 1.0E-37 T 14-10-2018 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 PRINTS PR00091 Nitrogenase component II signature 31 46 1.0E-37 T 14-10-2018 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 PRINTS PR00091 Nitrogenase component II signature 125 140 1.0E-37 T 14-10-2018 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 SUPERFAMILY SSF52540 7 280 4.8E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 14-10-2018 IPR030655 NifH/chlL conserved site VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 8.9E-139 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 PIRSF PIRSF000363 2 278 2.5E-125 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 14-10-2018 IPR030655 NifH/chlL conserved site VEJY3_18696 ae8ecf0318e5de9351bda1bcc14dbd08 293 Gene3D G3DSA:3.40.50.300 2 277 1.5E-73 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SUPERFAMILY SSF57783 748 811 4.08E-19 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SMART SM00493 3 138 1.5E-35 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:1.10.460.10 171 576 5.2E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SUPERFAMILY SSF56712 3 614 4.19E-198 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:1.10.290.10 286 410 5.2E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:2.20.25.10 812 870 1.4E-28 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 7.2E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 2.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 1.4E-18 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 54.405 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:3.40.50.140 1 169 1.5E-66 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SMART SM00437 278 532 8.2E-117 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:2.70.20.10 219 478 5.2E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF01751 Toprim domain 5 148 6.1E-33 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SUPERFAMILY SSF57783 813 869 6.46E-22 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 8.0E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:3.30.65.10 749 811 6.4E-31 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Gene3D G3DSA:3.30.65.10 700 748 2.6E-6 T 14-10-2018 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SMART SM00436 139 227 2.5E-47 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 Pfam PF01131 DNA topoisomerase 163 570 7.2E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEJY3_04750 4c0705f1dc880b23b1611d682e50cc44 875 SUPERFAMILY SSF57783 704 746 2.21E-5 T 14-10-2018 VEJY3_05300 d7548009eebfa2b9c31b2b977271aae2 208 Pfam PF13489 Methyltransferase domain 41 148 7.2E-9 T 14-10-2018 VEJY3_05300 d7548009eebfa2b9c31b2b977271aae2 208 SUPERFAMILY SSF53335 11 183 1.17E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_05300 d7548009eebfa2b9c31b2b977271aae2 208 Gene3D G3DSA:3.40.50.150 3 193 1.4E-17 T 14-10-2018 VEJY3_18426 2f12bb77630b4b2f8ae140ac77872376 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_18426 2f12bb77630b4b2f8ae140ac77872376 273 SUPERFAMILY SSF52540 13 251 3.77E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18426 2f12bb77630b4b2f8ae140ac77872376 273 Gene3D G3DSA:3.40.50.300 10 253 2.2E-57 T 14-10-2018 VEJY3_18426 2f12bb77630b4b2f8ae140ac77872376 273 SMART SM00382 40 231 3.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18426 2f12bb77630b4b2f8ae140ac77872376 273 Pfam PF00005 ABC transporter 31 179 2.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 6.4E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.579 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 Gene3D G3DSA:3.40.50.300 20 202 3.5E-51 T 14-10-2018 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 7.9E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 SUPERFAMILY SSF54814 200 316 4.25E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 SUPERFAMILY SSF52540 29 224 2.06E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13260 2234d470248f70217eee9284fdda420d 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_13260 2234d470248f70217eee9284fdda420d 320 Gene3D G3DSA:3.30.300.20 204 318 2.4E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_16161 c02afa86345c7a15905fa8d4b877fd3e 189 SUPERFAMILY SSF55729 19 187 1.14E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_16161 c02afa86345c7a15905fa8d4b877fd3e 189 Pfam PF13302 Acetyltransferase (GNAT) domain 27 163 5.2E-18 T 14-10-2018 IPR000182 GNAT domain VEJY3_16161 c02afa86345c7a15905fa8d4b877fd3e 189 Gene3D G3DSA:3.40.630.30 3 176 2.4E-29 T 14-10-2018 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 SUPERFAMILY SSF53822 65 335 6.67E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 Gene3D G3DSA:1.10.260.40 3 61 2.1E-23 T 14-10-2018 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 Pfam PF13377 Periplasmic binding protein-like domain 172 334 3.8E-28 T 14-10-2018 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 Gene3D G3DSA:3.40.50.2300 80 318 2.4E-56 T 14-10-2018 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 SMART SM00354 4 74 4.7E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 SUPERFAMILY SSF47413 4 62 1.83E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09540 095b25a6046f506fd984fa67faf26bff 361 Gene3D G3DSA:3.40.50.2300 163 291 2.4E-56 T 14-10-2018 VEJY3_16011 08a5e5a134a607446c77a853c45124fe 279 SUPERFAMILY SSF53474 3 277 3.38E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_16011 08a5e5a134a607446c77a853c45124fe 279 Pfam PF00756 Putative esterase 23 271 1.3E-59 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VEJY3_16011 08a5e5a134a607446c77a853c45124fe 279 Gene3D G3DSA:3.40.50.1820 3 278 3.2E-96 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 Pfam PF02311 AraC-like ligand binding domain 21 107 4.0E-10 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 SUPERFAMILY SSF46689 178 227 1.21E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 Gene3D G3DSA:2.60.120.10 3 118 5.9E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 SUPERFAMILY SSF51182 17 80 8.45E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 Gene3D G3DSA:1.10.10.60 227 281 1.1E-16 T 14-10-2018 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 SMART SM00342 193 276 5.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 4.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 4.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 Pfam PF12833 Helix-turn-helix domain 199 277 7.6E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 SUPERFAMILY SSF46689 229 277 2.28E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09340 ac368c69ed1855edd2a2dda4af383186 284 Gene3D G3DSA:1.10.10.60 175 226 1.2E-13 T 14-10-2018 VEJY3_17176 1cd1af281d5bf80da76b53d9e1d139fe 313 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 313 157.826 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VEJY3_17176 1cd1af281d5bf80da76b53d9e1d139fe 313 Gene3D G3DSA:1.10.4200.10 60 308 1.3E-8 T 14-10-2018 VEJY3_17176 1cd1af281d5bf80da76b53d9e1d139fe 313 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 35 303 3.1E-80 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VEJY3_13815 d0ba5e90a39b39b13805a23bfdd04487 191 SUPERFAMILY SSF54523 7 102 3.3E-5 T 14-10-2018 VEJY3_13815 d0ba5e90a39b39b13805a23bfdd04487 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_13815 d0ba5e90a39b39b13805a23bfdd04487 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 6.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 ProSitePatterns PS00850 Glycine radical domain signature. 820 828 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 Pfam PF02901 Pyruvate formate lyase-like 10 711 2.9E-251 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 Pfam PF01228 Glycine radical 728 831 2.9E-31 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 Gene3D G3DSA:3.20.70.20 627 849 2.4E-85 T 14-10-2018 VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 Gene3D G3DSA:3.20.70.20 9 604 1.7E-228 T 14-10-2018 VEJY3_08430 bdc516f757dcb639fe5c55f87231e354 849 SUPERFAMILY SSF51998 3 847 9.46E-255 T 14-10-2018 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SUPERFAMILY SSF103647 766 865 1.05E-17 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF01344 Kelch motif 125 164 2.1E-10 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF01344 Kelch motif 76 120 2.8E-10 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF01344 Kelch motif 32 74 4.0E-6 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SUPERFAMILY SSF103647 718 788 1.09E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Gene3D G3DSA:2.60.40.10 205 293 1.2E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SUPERFAMILY SSF117281 5 190 6.41E-47 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Gene3D G3DSA:2.120.10.80 2 204 6.6E-54 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF02412 Thrombospondin type 3 repeat 742 775 2.5E-9 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF02412 Thrombospondin type 3 repeat 835 859 4.1E-5 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF02412 Thrombospondin type 3 repeat 718 740 0.026 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Pfam PF02412 Thrombospondin type 3 repeat 799 833 7.4E-11 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Gene3D G3DSA:4.10.1080.10 695 788 4.3E-20 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 Gene3D G3DSA:4.10.1080.10 789 869 1.0E-18 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SUPERFAMILY SSF49299 201 287 1.1E-5 T 14-10-2018 IPR035986 PKD domain superfamily VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SMART SM00612 88 133 6.8E-10 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SMART SM00612 134 178 1.4E-5 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_18121 f4f96f8708db27d9a05c8e615e87eadb 1167 SMART SM00612 37 87 5.6E-10 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Gene3D G3DSA:3.40.228.10 130 595 1.2E-217 T 14-10-2018 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 SUPERFAMILY SSF50692 622 765 1.4E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 450 467 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Pfam PF00384 Molybdopterin oxidoreductase 38 507 9.4E-103 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Gene3D G3DSA:3.90.55.10 35 569 1.2E-217 T 14-10-2018 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Gene3D G3DSA:3.40.50.740 38 518 1.2E-217 T 14-10-2018 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 SUPERFAMILY SSF53706 2 619 2.3E-161 T 14-10-2018 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Pfam PF01568 Molydopterin dinucleotide binding domain 627 743 2.8E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_16171 dc5d3d17f25f95ff4cfb6a372e08024b 767 Gene3D G3DSA:2.40.40.20 603 761 7.3E-45 T 14-10-2018 VEJY3_03520 7e82bd08570668589faceec5646229f4 141 Gene3D G3DSA:1.20.58.300 1 113 1.4E-7 T 14-10-2018 VEJY3_03520 7e82bd08570668589faceec5646229f4 141 SUPERFAMILY SSF140566 1 113 9.94E-23 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VEJY3_03520 7e82bd08570668589faceec5646229f4 141 Pfam PF05130 FlgN protein 2 131 5.7E-25 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VEJY3_24331 fce5d9694a9a0727d32b032b1a412eef 227 Gene3D G3DSA:3.10.620.30 26 219 1.8E-72 T 14-10-2018 VEJY3_24331 fce5d9694a9a0727d32b032b1a412eef 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 8.4E-14 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 PIRSF PIRSF006614 8 151 2.5E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 Gene3D G3DSA:3.40.50.1380 1 151 1.2E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.023 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 SMART SM00851 25 118 2.7E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 SUPERFAMILY SSF52335 3 150 1.01E-57 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEJY3_19001 95afc6f33f70c6543b17f161771c75fe 151 Pfam PF02142 MGS-like domain 26 118 1.1E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 SUPERFAMILY SSF55729 300 425 5.06E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 222.605 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 Pfam PF00696 Amino acid kinase family 25 270 2.8E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 Gene3D G3DSA:3.40.630.30 297 445 3.2E-37 T 14-10-2018 VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 SUPERFAMILY SSF53633 4 294 1.44E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 417 3.4E-8 T 14-10-2018 IPR000182 GNAT domain VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 Gene3D G3DSA:3.40.1160.10 7 296 2.6E-84 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_12330 99d766f0032e7e1e6d453a1ae7abad94 445 PIRSF PIRSF000423 1 445 7.6E-203 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 Gene3D G3DSA:3.30.590.10 117 446 1.5E-84 T 14-10-2018 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 Pfam PF00120 Glutamine synthetase, catalytic domain 117 442 5.9E-86 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 SUPERFAMILY SSF55931 116 444 1.11E-85 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 SUPERFAMILY SSF54368 15 109 5.75E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_08300 af2a4d60f809652da3ba445596fbc49d 447 SMART SM01230 113 370 9.8E-84 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 SMART SM00850 164 263 1.9E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 SMART SM00448 5 117 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 Pfam PF04397 LytTr DNA-binding domain 165 262 8.0E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 Pfam PF00072 Response regulator receiver domain 8 116 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 Gene3D G3DSA:3.40.50.2300 2 138 2.6E-31 T 14-10-2018 VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 SUPERFAMILY SSF52172 4 144 4.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_15841 931d594e96989ce3cbfd1c5839b78758 263 Gene3D G3DSA:2.40.50.40 156 228 4.0E-9 T 14-10-2018 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 SUPERFAMILY SSF50156 386 452 8.02E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Gene3D G3DSA:2.30.42.10 362 455 3.4E-29 T 14-10-2018 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 SMART SM00228 267 349 1.9E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 SMART SM00228 374 447 4.0E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 SUPERFAMILY SSF50156 225 350 1.17E-27 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Pfam PF13180 PDZ domain 268 358 6.9E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Gene3D G3DSA:2.40.10.120 37 261 2.7E-85 T 14-10-2018 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 SUPERFAMILY SSF50494 37 258 1.72E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 444 4.8E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 7.8E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 9.2E-32 T 14-10-2018 VEJY3_01960 962ad7b1f4b16c7535a79c0a458c821f 455 Gene3D G3DSA:2.30.42.10 265 361 3.0E-28 T 14-10-2018 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 Gene3D G3DSA:3.30.70.920 58 142 1.0E-20 T 14-10-2018 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.2E-17 T 14-10-2018 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 SUPERFAMILY SSF54909 65 154 2.15E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 SMART SM00344 5 114 1.7E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 Gene3D G3DSA:1.10.10.10 6 57 3.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 SUPERFAMILY SSF46785 4 94 2.5E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_04335 ffe41aad8d73101d05904496a8cfa1d2 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 4.5E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 Pfam PF03466 LysR substrate binding domain 92 293 1.4E-16 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 SUPERFAMILY SSF53850 93 295 1.55E-19 T 14-10-2018 VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 SUPERFAMILY SSF46785 7 91 6.88E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 Gene3D G3DSA:3.40.190.290 97 298 2.5E-10 T 14-10-2018 VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17186 3bb4cbf7e754e046bfa1539edd30e660 300 Gene3D G3DSA:1.10.10.10 6 96 7.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14065 d0b32ee25f2b1e4e10f958caf07a9e74 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 1.7E-10 T 14-10-2018 IPR007813 Fimbrial assembly PilN VEJY3_22116 7361ffefdd86784f91d650181f5ca844 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.0E-45 T 14-10-2018 VEJY3_22116 7361ffefdd86784f91d650181f5ca844 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 6.4E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_22116 7361ffefdd86784f91d650181f5ca844 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 6.4E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_22116 7361ffefdd86784f91d650181f5ca844 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 6.4E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 SMART SM00471 26 151 3.8E-8 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 Pfam PF13023 HD domain 11 160 1.7E-17 T 14-10-2018 IPR006674 HD domain VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 SUPERFAMILY SSF109604 4 184 4.0E-44 T 14-10-2018 VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 Gene3D G3DSA:1.10.3210.10 1 194 6.3E-85 T 14-10-2018 VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.102 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VEJY3_04250 5d07861f19ce8c7915a0a9919e58b58a 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 7.0E-37 T 14-10-2018 VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 SUPERFAMILY SSF51338 1 411 6.26E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 Gene3D G3DSA:2.30.40.10 7 408 4.7E-160 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 Gene3D G3DSA:3.20.20.140 73 371 4.7E-160 T 14-10-2018 VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 SUPERFAMILY SSF51556 72 371 3.4E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.218 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEJY3_06160 854d3b966c0b29cd5b794904be1881d8 416 Pfam PF01979 Amidohydrolase family 70 408 5.1E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_15045 cc072527b4d665d55ff5146452f73f6e 234 Gene3D G3DSA:3.30.450.40 43 219 1.2E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_15045 cc072527b4d665d55ff5146452f73f6e 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 3.4E-68 T 14-10-2018 IPR007435 Protein of unknown function DUF484 VEJY3_02165 a329cf80c148ed574f6dbea1b942d42c 231 Pfam PF01048 Phosphorylase superfamily 2 227 6.0E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEJY3_02165 a329cf80c148ed574f6dbea1b942d42c 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.007 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEJY3_02165 a329cf80c148ed574f6dbea1b942d42c 231 Gene3D G3DSA:3.40.50.1580 1 231 3.3E-72 T 14-10-2018 VEJY3_02165 a329cf80c148ed574f6dbea1b942d42c 231 SUPERFAMILY SSF53167 1 229 5.5E-74 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 Gene3D G3DSA:3.40.190.290 93 283 2.6E-35 T 14-10-2018 VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 SUPERFAMILY SSF53850 92 289 3.98E-22 T 14-10-2018 VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 Gene3D G3DSA:1.10.10.10 1 88 5.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 Pfam PF03466 LysR substrate binding domain 111 285 1.2E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_21816 6291d296d88c1488cf9366b40a79c0c4 292 SUPERFAMILY SSF46785 1 86 1.14E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14275 59a84f18110880ea81f721f961540be2 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 8.8E-123 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 SUPERFAMILY SSF53720 2 449 8.38E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 Gene3D G3DSA:3.40.605.10 7 448 5.4E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.464 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VEJY3_14275 59a84f18110880ea81f721f961540be2 485 Gene3D G3DSA:3.40.309.10 247 436 5.4E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_05565 b0488207246aafce98e106f17d568241 346 Pfam PF00155 Aminotransferase class I and II 42 338 2.1E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_05565 b0488207246aafce98e106f17d568241 346 Gene3D G3DSA:3.90.1150.10 4 336 4.8E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_05565 b0488207246aafce98e106f17d568241 346 SUPERFAMILY SSF53383 10 343 5.5E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_05565 b0488207246aafce98e106f17d568241 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEJY3_05565 b0488207246aafce98e106f17d568241 346 Gene3D G3DSA:3.40.640.10 49 253 4.8E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05565 b0488207246aafce98e106f17d568241 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.09 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VEJY3_18601 c74a31f4585553cbd9e10a993c0cce2e 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.0E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEJY3_18601 c74a31f4585553cbd9e10a993c0cce2e 312 Gene3D G3DSA:3.40.190.10 28 289 3.5E-94 T 14-10-2018 VEJY3_18601 c74a31f4585553cbd9e10a993c0cce2e 312 Gene3D G3DSA:3.40.190.100 109 218 3.5E-94 T 14-10-2018 VEJY3_18601 c74a31f4585553cbd9e10a993c0cce2e 312 SUPERFAMILY SSF53850 20 296 1.09E-88 T 14-10-2018 VEJY3_19931 8061f5367ac051a7e0e811ab96a9aa23 219 Pfam PF12339 DNA-J related protein 29 150 1.7E-37 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal VEJY3_19931 8061f5367ac051a7e0e811ab96a9aa23 219 Pfam PF00226 DnaJ domain 171 218 4.2E-9 T 14-10-2018 IPR001623 DnaJ domain VEJY3_19931 8061f5367ac051a7e0e811ab96a9aa23 219 SMART SM00271 165 219 1.8E-7 T 14-10-2018 IPR001623 DnaJ domain VEJY3_19931 8061f5367ac051a7e0e811ab96a9aa23 219 Gene3D G3DSA:1.10.287.110 158 219 1.5E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_19931 8061f5367ac051a7e0e811ab96a9aa23 219 SUPERFAMILY SSF46565 163 218 2.62E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 Pfam PF12833 Helix-turn-helix domain 213 291 7.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 SMART SM00342 207 290 8.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 SUPERFAMILY SSF46689 247 291 1.75E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 SUPERFAMILY SSF51215 36 174 1.1E-10 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 Gene3D G3DSA:1.10.10.60 189 294 2.5E-24 T 14-10-2018 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 Pfam PF02311 AraC-like ligand binding domain 35 111 4.3E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_18141 4bff86d993c58b0e6d4a9e3f8c8c250c 299 Gene3D G3DSA:2.60.120.10 12 108 1.9E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 SUPERFAMILY SSF53850 90 280 3.62E-16 T 14-10-2018 VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 Gene3D G3DSA:3.40.190.290 115 275 8.5E-9 T 14-10-2018 VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 SUPERFAMILY SSF46785 3 75 2.4E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 7.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 Pfam PF03466 LysR substrate binding domain 90 276 8.9E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_02145 6a50ca8fe67317c533925bc286db74da 289 Gene3D G3DSA:1.10.10.10 4 67 3.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 SUPERFAMILY SSF46689 9 84 1.15E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 SUPERFAMILY SSF48498 89 197 2.18E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_12990 8533e846b7b08c0c2b14311482493b5f 204 Gene3D G3DSA:1.10.357.10 1 204 3.0E-84 T 14-10-2018 VEJY3_00295 06e500cf32bfaeeb7753a4db96df70f5 292 SUPERFAMILY SSF103481 35 131 4.97E-5 T 14-10-2018 VEJY3_00295 06e500cf32bfaeeb7753a4db96df70f5 292 Pfam PF00892 EamA-like transporter family 138 274 1.8E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_00295 06e500cf32bfaeeb7753a4db96df70f5 292 SUPERFAMILY SSF103481 184 276 1.57E-5 T 14-10-2018 VEJY3_22641 470d9f02a0aba762ad47f1748827a3ef 490 Pfam PF08388 Group II intron, maturase-specific domain 341 416 2.0E-23 T 14-10-2018 IPR013597 Group II intron, maturase-specific VEJY3_22641 470d9f02a0aba762ad47f1748827a3ef 490 SUPERFAMILY SSF56672 80 406 9.45E-51 T 14-10-2018 VEJY3_22641 470d9f02a0aba762ad47f1748827a3ef 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 321 4.1E-41 T 14-10-2018 IPR000477 Reverse transcriptase domain VEJY3_22641 470d9f02a0aba762ad47f1748827a3ef 490 Pfam PF13655 N-terminal domain of reverse transcriptase 16 97 2.5E-31 T 14-10-2018 IPR025960 Reverse transcriptase, N-terminal domain VEJY3_06935 d092508bbdb68262d683e1a82c9dda20 371 Gene3D G3DSA:1.10.3210.10 171 367 9.0E-27 T 14-10-2018 VEJY3_06935 d092508bbdb68262d683e1a82c9dda20 371 SUPERFAMILY SSF109604 175 338 5.23E-10 T 14-10-2018 VEJY3_06935 d092508bbdb68262d683e1a82c9dda20 371 Gene3D G3DSA:3.30.450.40 10 155 3.0E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_06935 d092508bbdb68262d683e1a82c9dda20 371 Pfam PF13487 HD domain 275 304 1.6E-8 T 14-10-2018 VEJY3_06935 d092508bbdb68262d683e1a82c9dda20 371 SUPERFAMILY SSF55781 14 142 5.33E-9 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 Gene3D G3DSA:3.30.870.10 18 225 5.9E-165 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 Pfam PF13091 PLD-like domain 34 173 1.2E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 Pfam PF13091 PLD-like domain 251 402 1.5E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 Gene3D G3DSA:3.30.870.10 12 441 5.9E-165 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 SUPERFAMILY SSF56024 9 182 8.11E-29 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 PIRSF PIRSF000850 3 446 3.7E-213 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 SUPERFAMILY SSF56024 245 425 3.4E-27 T 14-10-2018 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 SMART SM00155 126 152 5.3E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_14830 3509e9905e1c29d6cc7f6d34eec4e9a3 446 SMART SM00155 347 374 0.0083 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_21941 a6eb92c446d90d4c46547566b68e80c7 255 Pfam PF02104 SURF1 family 24 230 1.1E-20 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_23706 bdf78a8fbc7da78e6415c3073faab035 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 7.8E-126 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VEJY3_23706 bdf78a8fbc7da78e6415c3073faab035 726 SUPERFAMILY SSF51445 162 718 1.11E-148 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 SMART SM00448 12 123 1.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 SMART SM00382 168 311 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Gene3D G3DSA:1.10.10.60 413 457 5.7E-9 T 14-10-2018 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Gene3D G3DSA:1.10.8.60 320 400 1.2E-23 T 14-10-2018 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 SUPERFAMILY SSF52540 148 391 3.06E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Gene3D G3DSA:3.40.50.300 139 319 2.1E-65 T 14-10-2018 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 SUPERFAMILY SSF46689 361 458 1.4E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 459 1.9E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Pfam PF00158 Sigma-54 interaction domain 149 314 3.1E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Pfam PF00072 Response regulator receiver domain 15 123 4.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 Gene3D G3DSA:3.40.50.2300 2 138 3.4E-33 T 14-10-2018 VEJY3_10905 4f2a473b3d22c3cb72780d0bef129922 468 SUPERFAMILY SSF52172 14 192 8.68E-42 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 4.7E-115 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.772 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Gene3D G3DSA:1.10.443.10 118 299 1.7E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 SUPERFAMILY SSF47823 11 107 9.81E-34 T 14-10-2018 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Pfam PF00589 Phage integrase family 120 291 4.2E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 1.9E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 SUPERFAMILY SSF56349 113 303 2.38E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 56.142 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VEJY3_02300 3a0e3b08631df4e06ffe47b725d2acac 305 Gene3D G3DSA:1.10.150.130 10 105 5.4E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_21831 b249e8fdb0a6d818eed56986decb18c5 216 SUPERFAMILY SSF52317 1 215 7.37E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_21831 b249e8fdb0a6d818eed56986decb18c5 216 Gene3D G3DSA:3.40.50.880 1 216 8.3E-86 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_21831 b249e8fdb0a6d818eed56986decb18c5 216 PIRSF PIRSF006320 1 216 1.6E-105 T 14-10-2018 IPR026041 Glyoxalase ElbB VEJY3_08820 d1d8383795bc1938d6bd8d8fec9d10bb 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 6.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 43 61 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 28 37 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 7 22 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 SUPERFAMILY SSF50249 4 69 1.09E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 PIRSF PIRSF002599 1 70 1.5E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 Gene3D G3DSA:2.40.50.140 2 69 5.6E-27 T 14-10-2018 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 SMART SM00357 6 70 1.3E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_17026 98a2038dbbd1cf8d88d3d8207f720445 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.3E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_06965 080f957b9e72ee544772409cf5a3c76b 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VEJY3_06965 080f957b9e72ee544772409cf5a3c76b 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 346 5.6E-85 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEJY3_06965 080f957b9e72ee544772409cf5a3c76b 357 Gene3D G3DSA:3.40.718.10 1 356 1.2E-131 T 14-10-2018 VEJY3_06965 080f957b9e72ee544772409cf5a3c76b 357 SUPERFAMILY SSF53659 2 352 2.11E-114 T 14-10-2018 VEJY3_06965 080f957b9e72ee544772409cf5a3c76b 357 SMART SM01329 5 348 5.4E-170 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 PIRSF PIRSF000303 2 181 6.1E-54 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 3.0E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 3.0E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 3.0E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 Gene3D G3DSA:3.40.30.10 26 181 1.1E-43 T 14-10-2018 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 SUPERFAMILY SSF52833 46 181 2.94E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 Pfam PF00255 Glutathione peroxidase 45 133 4.9E-26 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEJY3_17421 3125ed8adf63d378cc612612e34a2f75 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 SUPERFAMILY SSF51569 9 284 1.15E-78 T 14-10-2018 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 Pfam PF00682 HMGL-like 10 266 8.3E-79 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 196 209 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 Gene3D G3DSA:3.20.20.70 2 271 1.0E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 Gene3D G3DSA:1.10.238.260 275 378 5.0E-23 T 14-10-2018 VEJY3_18751 a63e5f277fa9b0717441317cfb86db04 380 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Gene3D G3DSA:3.30.470.20 86 433 1.5E-157 T 14-10-2018 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 SMART SM00878 336 441 1.9E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 SUPERFAMILY SSF56059 83 346 1.77E-71 T 14-10-2018 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.2E-85 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 SUPERFAMILY SSF52440 1 113 5.54E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 14-10-2018 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.9E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 SUPERFAMILY SSF51246 331 444 2.56E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 Gene3D G3DSA:3.30.1490.20 131 203 1.5E-157 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_14635 18aaaf4c61a2eb17bdabc0f15386c541 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:2.40.40.20 1285 1406 1.8E-40 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.40.228.10 864 1065 3.7E-176 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF53706 724 1261 1.05E-203 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 733 1403 2.4E-246 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF54292 1 98 6.34E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 699 710 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1158 1175 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.40.50.740 791 1253 3.7E-176 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:2.20.25.90 728 783 8.8E-20 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF00384 Molybdopterin oxidoreductase 786 1212 1.2E-87 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 729 781 5.0E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.30.70.20 619 717 3.5E-17 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF46548 89 200 3.24E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF01568 Molydopterin dinucleotide binding domain 1295 1399 2.4E-29 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.50.50.60 307 405 1.6E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 4.2E-15 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 4.2E-15 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 4.2E-15 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SMART SM00926 728 783 5.7E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:1.10.1060.10 57 189 2.7E-25 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 1.5E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 733 750 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF50692 1251 1404 7.46E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF00037 4Fe-4S binding domain 697 714 4.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF00037 4Fe-4S binding domain 633 654 1.3E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.50.50.60 190 306 1.3E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF51971 191 430 3.47E-62 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 SUPERFAMILY SSF54862 567 718 4.1E-20 T 14-10-2018 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Gene3D G3DSA:3.50.50.60 415 500 2.1E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 2.8E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_22126 14beb383f7e3014d6eb978a784b1675a 1422 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 14-10-2018 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.702 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 PIRSF PIRSF001619 1 319 4.0E-138 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 SMART SM00729 43 255 2.9E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 SMART SM00876 220 312 2.4E-45 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 SUPERFAMILY SSF102114 5 310 2.49E-89 T 14-10-2018 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.1E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 Gene3D G3DSA:3.20.20.70 4 315 3.0E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_05440 e1b3976c32dd9452d9aada1753eb36ee 350 Pfam PF04055 Radical SAM superfamily 50 199 5.9E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_08520 6ec4097004ae0aba4ec0442bd64ccae5 407 SUPERFAMILY SSF55874 259 403 1.31E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08520 6ec4097004ae0aba4ec0442bd64ccae5 407 Pfam PF10114 Sensory domain found in PocR 8 169 4.2E-47 T 14-10-2018 IPR018771 PocR domain VEJY3_08520 6ec4097004ae0aba4ec0442bd64ccae5 407 Gene3D G3DSA:3.30.565.10 264 407 1.4E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_08520 6ec4097004ae0aba4ec0442bd64ccae5 407 Pfam PF06580 Histidine kinase 202 282 1.2E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VEJY3_24011 a73ce891fd0d1370fc2b5ece611e64bb 365 Gene3D G3DSA:3.30.200.20 50 115 6.9E-6 T 14-10-2018 VEJY3_24011 a73ce891fd0d1370fc2b5ece611e64bb 365 SUPERFAMILY SSF56112 42 218 6.88E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_24011 a73ce891fd0d1370fc2b5ece611e64bb 365 Gene3D G3DSA:1.10.510.10 116 191 6.9E-6 T 14-10-2018 VEJY3_13700 37ecc4a071b2529261debe5dcd4e47b9 95 SUPERFAMILY SSF69754 1 95 5.62E-35 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEJY3_13700 37ecc4a071b2529261debe5dcd4e47b9 95 Gene3D G3DSA:3.30.160.100 1 95 9.2E-39 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEJY3_13700 37ecc4a071b2529261debe5dcd4e47b9 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 Gene3D G3DSA:2.60.40.1180 361 427 3.5E-107 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 SMART SM00812 21 403 6.4E-83 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 Gene3D G3DSA:3.20.20.80 36 360 3.5E-107 T 14-10-2018 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 Pfam PF01120 Alpha-L-fucosidase 24 357 5.0E-80 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 SUPERFAMILY SSF51445 32 359 6.32E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 PRINTS PR00741 Glycosyl hydrolase family 29 signature 310 331 1.9E-11 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 PRINTS PR00741 Glycosyl hydrolase family 29 signature 343 365 1.9E-11 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_11310 c0fcbc5064872ba585b6158fabccaeef 607 PRINTS PR00741 Glycosyl hydrolase family 29 signature 111 127 1.9E-11 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Gene3D G3DSA:3.40.50.1070 1 173 7.4E-86 T 14-10-2018 IPR038391 L-fucose isomerase, domain 1 superfamily KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Gene3D G3DSA:3.40.275.10 174 336 3.1E-78 T 14-10-2018 IPR038392 L-fucose isomerase, domain 2 superfamily KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Pfam PF07881 L-fucose isomerase, first N-terminal domain 5 172 1.2E-80 T 14-10-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Pfam PF07882 L-fucose isomerase, second N-terminal domain 173 350 8.1E-92 T 14-10-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Pfam PF02952 L-fucose isomerase, C-terminal domain 382 546 2.0E-52 T 14-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 SUPERFAMILY SSF50443 352 582 1.52E-120 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Gene3D G3DSA:3.20.14.10 337 582 1.4E-123 T 14-10-2018 IPR038393 L-fucose isomerase, domain 3 superfamily KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 Hamap MF_01254 L-fucose isomerase [fucI]. 1 582 67.489 T 14-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 VEJY3_21156 185cc1536851e7d344744dace85e2725 582 SUPERFAMILY SSF53743 1 351 1.96E-153 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 VEJY3_15010 ab5f0580a5da9134cf16e80f38ef3bb8 333 Gene3D G3DSA:3.40.50.1820 29 328 2.9E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_15010 ab5f0580a5da9134cf16e80f38ef3bb8 333 SUPERFAMILY SSF53474 41 324 7.22E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_15010 ab5f0580a5da9134cf16e80f38ef3bb8 333 Pfam PF12146 Serine aminopeptidase, S33 53 310 3.4E-58 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VEJY3_06320 10d4f90bda801b5c54867cc195b34874 129 SUPERFAMILY SSF55729 13 115 2.34E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_06320 10d4f90bda801b5c54867cc195b34874 129 Pfam PF00583 Acetyltransferase (GNAT) family 13 106 5.0E-11 T 14-10-2018 IPR000182 GNAT domain VEJY3_06320 10d4f90bda801b5c54867cc195b34874 129 Gene3D G3DSA:3.40.630.30 3 128 5.8E-22 T 14-10-2018 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 SUPERFAMILY SSF56024 66 313 4.19E-50 T 14-10-2018 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 SMART SM00155 219 246 4.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 SMART SM00155 397 424 9.5E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 7.6E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Gene3D G3DSA:3.30.870.10 115 311 2.0E-37 T 14-10-2018 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Pfam PF13091 PLD-like domain 327 447 1.3E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Pfam PF13091 PLD-like domain 134 268 1.1E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Gene3D G3DSA:3.30.870.10 315 457 1.3E-24 T 14-10-2018 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.681 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 1.1E-155 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VEJY3_05760 b2efc2989c787ff2a6512abdcd1fda1d 484 SUPERFAMILY SSF56024 273 469 1.61E-47 T 14-10-2018 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Gene3D G3DSA:3.40.50.920 531 661 2.6E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 SMART SM00861 342 517 3.7E-56 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 SUPERFAMILY SSF52922 528 660 5.23E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Gene3D G3DSA:3.40.50.970 339 530 1.3E-71 T 14-10-2018 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Pfam PF00676 Dehydrogenase E1 component 18 308 8.0E-83 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Pfam PF02780 Transketolase, C-terminal domain 531 652 5.4E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 SUPERFAMILY SSF52518 341 520 1.77E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Gene3D G3DSA:3.40.50.970 1 329 9.9E-119 T 14-10-2018 VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 SUPERFAMILY SSF52518 4 321 1.06E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_20381 b4a8edae6f351478c5de7dd9f3435472 668 Pfam PF02779 Transketolase, pyrimidine binding domain 341 516 1.2E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 Gene3D G3DSA:1.10.10.10 1 75 9.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 SUPERFAMILY SSF48008 91 229 4.71E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 SMART SM00895 92 222 2.9E-18 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 6.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 6.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 Pfam PF07729 FCD domain 92 221 4.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 SUPERFAMILY SSF46785 5 74 2.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 Gene3D G3DSA:1.20.120.530 82 234 9.6E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_09420 7b734c1c5447f2c33acb0294114d76f7 251 SMART SM00345 11 70 1.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Gene3D G3DSA:3.40.120.10 259 376 9.9E-38 T 14-10-2018 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 415 471 4.8E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 SUPERFAMILY SSF53738 14 138 1.14E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 SUPERFAMILY SSF53738 246 379 1.59E-5 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Gene3D G3DSA:3.40.120.10 7 151 3.6E-41 T 14-10-2018 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 379 2.0E-9 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 15 137 4.2E-27 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 SUPERFAMILY SSF53738 161 260 5.1E-13 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 SUPERFAMILY SSF55957 409 472 1.7E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Gene3D G3DSA:3.40.120.10 178 258 2.5E-30 T 14-10-2018 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Gene3D G3DSA:3.30.310.50 377 477 7.7E-26 T 14-10-2018 VEJY3_01050 0f42dcf31b602e658215c842d7f372c5 479 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 1.2E-9 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Pfam PF13437 HlyD family secretion protein 172 264 4.6E-10 T 14-10-2018 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Gene3D G3DSA:2.40.30.170 45 281 6.5E-61 T 14-10-2018 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Gene3D G3DSA:2.40.420.20 38 350 6.5E-61 T 14-10-2018 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Gene3D G3DSA:1.10.287.470 94 167 6.5E-61 T 14-10-2018 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 SUPERFAMILY SSF111369 48 223 4.84E-22 T 14-10-2018 VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Pfam PF13533 Biotin-lipoyl like 64 106 5.4E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_16911 ed91407656f59e895b524c230cece6c3 360 Gene3D G3DSA:2.40.50.100 60 206 6.5E-61 T 14-10-2018 VEJY3_10695 cb47a6b9fd4f1f281fe213f544683120 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.7E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_10695 cb47a6b9fd4f1f281fe213f544683120 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.83 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_10695 cb47a6b9fd4f1f281fe213f544683120 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.8E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_10695 cb47a6b9fd4f1f281fe213f544683120 316 Gene3D G3DSA:3.40.47.10 1 316 4.6E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_10695 cb47a6b9fd4f1f281fe213f544683120 316 SUPERFAMILY SSF53901 3 315 2.25E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 SUPERFAMILY SSF102405 119 327 1.51E-41 T 14-10-2018 VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 Gene3D G3DSA:3.30.1850.10 1 120 2.4E-56 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 Pfam PF03641 Possible lysine decarboxylase 187 326 4.8E-35 T 14-10-2018 IPR031100 LOG family VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 3.6E-56 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 3.8E-50 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEJY3_03215 a854d71cfab6823ce389c623ac549e8c 458 Gene3D G3DSA:3.40.50.450 121 450 5.1E-123 T 14-10-2018 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 Gene3D G3DSA:3.40.50.620 4 183 1.7E-46 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 Gene3D G3DSA:3.40.50.1220 184 308 1.5E-58 T 14-10-2018 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 PIRSF PIRSF000089 1 308 2.4E-109 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 SUPERFAMILY SSF52467 186 308 6.54E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 Pfam PF01012 Electron transfer flavoprotein domain 4 161 4.5E-32 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 SMART SM00893 3 186 2.7E-33 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 6.2E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VEJY3_18386 97f06c450176ee3fafe8c1b613e68aaa 308 SUPERFAMILY SSF52402 4 182 4.74E-46 T 14-10-2018 VEJY3_24061 3027527dfe3203c81a654ba3a9ab8a51 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 632 2.9E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_24061 3027527dfe3203c81a654ba3a9ab8a51 667 SMART SM00304 337 389 0.002 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_24061 3027527dfe3203c81a654ba3a9ab8a51 667 SMART SM00283 404 665 3.9E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_24061 3027527dfe3203c81a654ba3a9ab8a51 667 Gene3D G3DSA:1.10.287.950 337 667 1.9E-61 T 14-10-2018 VEJY3_24061 3027527dfe3203c81a654ba3a9ab8a51 667 SUPERFAMILY SSF58104 357 666 1.44E-63 T 14-10-2018 VEJY3_21391 4ce397c82db4c7dfa0a8087bd4e31132 165 Pfam PF07883 Cupin domain 73 141 6.2E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_21391 4ce397c82db4c7dfa0a8087bd4e31132 165 SUPERFAMILY SSF51182 41 162 3.21E-30 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_21391 4ce397c82db4c7dfa0a8087bd4e31132 165 Gene3D G3DSA:2.60.120.10 34 163 6.6E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_21451 308278bdb11d7b6a2f6a951cecc7869d 372 Pfam PF16966 Porin-like glycoporin RafY 46 372 3.1E-95 T 14-10-2018 IPR016963 Glycoporin RafY VEJY3_21451 308278bdb11d7b6a2f6a951cecc7869d 372 SUPERFAMILY SSF56935 33 372 1.34E-11 T 14-10-2018 VEJY3_05820 9dddfa8e47a403c3aaea00a0ba9b2eea 148 Gene3D G3DSA:2.40.128.270 40 143 4.1E-29 T 14-10-2018 IPR038670 HslJ-like superfamily VEJY3_05820 9dddfa8e47a403c3aaea00a0ba9b2eea 148 Pfam PF03724 META domain 34 141 7.4E-27 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 Gene3D G3DSA:3.40.50.720 3 356 2.9E-145 T 14-10-2018 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 2.0E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 PIRSF PIRSF000148 1 371 3.5E-65 T 14-10-2018 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 SMART SM00859 2 121 1.6E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 SUPERFAMILY SSF51735 1 146 3.94E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.2E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 SUPERFAMILY SSF55347 133 354 8.54E-78 T 14-10-2018 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.699 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_11020 9f6b1c04f9a05da4905a7b7146256617 371 Gene3D G3DSA:3.30.360.10 134 350 2.9E-145 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.718 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.6E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Pfam PF07244 Surface antigen variable number repeat 92 172 4.3E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Pfam PF07244 Surface antigen variable number repeat 347 420 2.4E-17 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.5E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:3.10.20.310 347 424 5.9E-26 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:3.10.20.310 92 174 1.2E-17 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:2.40.160.50 425 804 4.6E-123 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:3.10.20.310 264 346 2.5E-13 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:3.10.20.310 175 263 3.9E-22 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Pfam PF01103 Surface antigen 448 804 4.8E-91 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 Gene3D G3DSA:3.10.20.310 18 91 3.7E-19 T 14-10-2018 VEJY3_12035 e5298e74862aedae696578953661e9a2 804 PIRSF PIRSF006076 1 804 2.1E-244 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VEJY3_20756 0b1720ac7e825b0b78ac43d49030b31e 128 Pfam PF02673 Bacitracin resistance protein BacA 21 121 1.1E-31 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 SUPERFAMILY SSF51905 3 532 6.85E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 PIRSF PIRSF000137 1 540 2.4E-149 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 Gene3D G3DSA:3.50.50.60 4 529 2.3E-183 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 Pfam PF05199 GMC oxidoreductase 387 524 4.5E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 SUPERFAMILY SSF54373 289 472 3.83E-45 T 14-10-2018 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 Gene3D G3DSA:3.30.560.10 43 467 2.3E-183 T 14-10-2018 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 Pfam PF00732 GMC oxidoreductase 4 294 3.5E-91 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_04835 1e99c0c2692c6a1aa8d7aaeb83d04f70 546 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEJY3_19486 01da338f6b8831c814e24d677e133ccc 484 Pfam PF05762 VWA domain containing CoxE-like protein 319 447 2.5E-11 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like VEJY3_19486 01da338f6b8831c814e24d677e133ccc 484 SUPERFAMILY SSF53300 318 459 1.33E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_19486 01da338f6b8831c814e24d677e133ccc 484 Gene3D G3DSA:3.40.50.410 322 466 8.0E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_18331 e5446c42296923d93d51e8dbc1126cd1 201 Gene3D G3DSA:3.40.50.300 1 187 1.1E-6 T 14-10-2018 VEJY3_18331 e5446c42296923d93d51e8dbc1126cd1 201 Pfam PF13521 AAA domain 7 169 6.4E-23 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VEJY3_18331 e5446c42296923d93d51e8dbc1126cd1 201 SUPERFAMILY SSF52540 1 125 7.66E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 487 507 4.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 470 487 4.9E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 SUPERFAMILY SSF46689 455 506 5.38E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Gene3D G3DSA:3.30.450.20 22 122 2.0E-8 T 14-10-2018 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 SMART SM00382 183 327 5.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Pfam PF02954 Bacterial regulatory protein, Fis family 465 504 3.7E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Pfam PF00158 Sigma-54 interaction domain 163 331 8.2E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Gene3D G3DSA:1.10.8.60 335 401 4.5E-21 T 14-10-2018 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 SUPERFAMILY SSF52540 163 398 8.7E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Gene3D G3DSA:3.40.50.300 148 334 1.3E-63 T 14-10-2018 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 Gene3D G3DSA:1.10.10.60 443 508 3.6E-16 T 14-10-2018 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 250 265 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 187 200 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_20441 33f319ea5aff16d684aff352f9d68dcd 512 SUPERFAMILY SSF55785 37 119 4.71E-6 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 Gene3D G3DSA:3.40.30.10 8 84 1.9E-30 T 14-10-2018 VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 SUPERFAMILY SSF52833 1 77 4.95E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 Gene3D G3DSA:1.20.1050.10 91 216 2.7E-37 T 14-10-2018 VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 1.9E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 SUPERFAMILY SSF47616 81 216 2.04E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_08645 e50f10d5b6a88e8c5f42948341b36513 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 215 6.1E-39 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal VEJY3_21291 73a1b66cdd46bc81701a3da1bba0f216 287 Gene3D G3DSA:2.40.30.170 168 287 6.2E-27 T 14-10-2018 VEJY3_21291 73a1b66cdd46bc81701a3da1bba0f216 287 Gene3D G3DSA:2.40.50.100 41 108 5.8E-13 T 14-10-2018 VEJY3_21291 73a1b66cdd46bc81701a3da1bba0f216 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 228 2.0E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_21291 73a1b66cdd46bc81701a3da1bba0f216 287 SUPERFAMILY SSF111369 37 237 7.59E-26 T 14-10-2018 VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 PIRSF PIRSF002155 1 227 8.0E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 Gene3D G3DSA:3.40.50.790 68 159 8.2E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 SUPERFAMILY SSF56808 6 225 1.28E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 Gene3D G3DSA:3.30.190.20 21 225 8.2E-80 T 14-10-2018 VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.894 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 8.7E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VEJY3_14780 04904280a4b7523e01816335e9d8b41a 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_00810 ea3a840ae24aa8bc682c18787f7e3be2 279 Pfam PF00005 ABC transporter 32 181 2.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00810 ea3a840ae24aa8bc682c18787f7e3be2 279 Gene3D G3DSA:3.40.50.300 3 279 1.5E-88 T 14-10-2018 VEJY3_00810 ea3a840ae24aa8bc682c18787f7e3be2 279 SUPERFAMILY SSF52540 6 254 2.96E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00810 ea3a840ae24aa8bc682c18787f7e3be2 279 SMART SM00382 40 240 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00810 ea3a840ae24aa8bc682c18787f7e3be2 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_09310 2674b01d755bfdf22cd5a379ffffd246 492 Gene3D G3DSA:3.40.605.10 33 479 7.6E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_09310 2674b01d755bfdf22cd5a379ffffd246 492 SUPERFAMILY SSF53720 9 489 8.64E-147 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_09310 2674b01d755bfdf22cd5a379ffffd246 492 Pfam PF00171 Aldehyde dehydrogenase family 31 488 2.7E-149 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_09310 2674b01d755bfdf22cd5a379ffffd246 492 Gene3D G3DSA:3.40.309.10 264 456 7.6E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_04240 1d8c4a777314a20652504c52e589cd84 207 SMART SM01144 1 193 3.0E-68 T 14-10-2018 IPR005636 DTW VEJY3_04240 1d8c4a777314a20652504c52e589cd84 207 Pfam PF03942 DTW domain 3 188 1.1E-51 T 14-10-2018 IPR005636 DTW VEJY3_12745 cee028773751d72184c455be8c0235e4 339 SUPERFAMILY SSF56935 22 339 5.19E-53 T 14-10-2018 VEJY3_12745 cee028773751d72184c455be8c0235e4 339 Gene3D G3DSA:2.40.160.10 22 339 1.8E-64 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_12745 cee028773751d72184c455be8c0235e4 339 Pfam PF13609 Gram-negative porin 10 304 1.2E-25 T 14-10-2018 VEJY3_05340 dfffb934a4e31dd0cd68ea32b9001f0e 205 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 5 202 3.3E-51 T 14-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 Gene3D G3DSA:2.40.50.140 210 280 7.8E-8 T 14-10-2018 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 SUPERFAMILY SSF50249 173 277 3.68E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 Pfam PF14743 DNA ligase OB-like domain 212 277 2.5E-27 T 14-10-2018 IPR029319 DNA ligase, OB-like domain VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 Gene3D G3DSA:3.30.470.30 51 151 3.6E-56 T 14-10-2018 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 SUPERFAMILY SSF56091 21 198 1.03E-40 T 14-10-2018 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 Pfam PF01068 ATP dependent DNA ligase domain 44 198 9.5E-8 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 VEJY3_07070 e40fae2b65c608e0124967319fdfa7e6 280 Gene3D G3DSA:3.30.1490.70 31 190 3.6E-56 T 14-10-2018 VEJY3_06375 20874b955646f4c98074afb3463a97f3 255 Gene3D G3DSA:3.40.50.300 5 254 3.4E-52 T 14-10-2018 VEJY3_06375 20874b955646f4c98074afb3463a97f3 255 SMART SM00382 22 217 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06375 20874b955646f4c98074afb3463a97f3 255 SUPERFAMILY SSF52540 16 231 1.03E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06375 20874b955646f4c98074afb3463a97f3 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 44.665 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VEJY3_06375 20874b955646f4c98074afb3463a97f3 255 Pfam PF00005 ABC transporter 15 168 4.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 Gene3D G3DSA:3.30.750.70 71 131 2.2E-8 T 14-10-2018 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 SUPERFAMILY SSF46785 5 77 7.25E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.6E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 SMART SM00420 6 58 3.2E-26 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 SUPERFAMILY SSF100950 74 234 3.29E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.1E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.1E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 SMART SM01134 72 234 2.7E-67 T 14-10-2018 VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 Gene3D G3DSA:1.10.10.10 1 67 2.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12400 dfb5ffb9387db11db66f098cd8a54e6f 264 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.7E-23 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_20146 cb2e6a01e80b5ef076b39a805019c5f8 173 Pfam PF13275 S4 domain 29 91 1.0E-21 T 14-10-2018 VEJY3_20146 cb2e6a01e80b5ef076b39a805019c5f8 173 Gene3D G3DSA:3.10.290.10 18 93 8.8E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_20146 cb2e6a01e80b5ef076b39a805019c5f8 173 SUPERFAMILY SSF55174 19 92 7.21E-17 T 14-10-2018 VEJY3_04350 2e6c6793ec54b0fd64d608ca1a77fb5f 100 SUPERFAMILY SSF46767 2 84 6.41E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VEJY3_04350 2e6c6793ec54b0fd64d608ca1a77fb5f 100 Gene3D G3DSA:1.10.10.10 1 100 9.0E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04350 2e6c6793ec54b0fd64d608ca1a77fb5f 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 2.3E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEJY3_13875 d00b3f55a91970e1735d93ef9e985b85 481 PIRSF PIRSF028153 1 481 2.2E-217 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI VEJY3_13875 d00b3f55a91970e1735d93ef9e985b85 481 SUPERFAMILY SSF53067 46 155 1.68E-11 T 14-10-2018 VEJY3_01080 ae18dde2670d664039fda314719f7f0e 721 Pfam PF13614 AAA domain 539 651 2.0E-12 T 14-10-2018 IPR025669 AAA domain VEJY3_01080 ae18dde2670d664039fda314719f7f0e 721 Pfam PF02706 Chain length determinant protein 17 107 1.4E-18 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VEJY3_01080 ae18dde2670d664039fda314719f7f0e 721 SUPERFAMILY SSF52540 523 704 1.67E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01080 ae18dde2670d664039fda314719f7f0e 721 Gene3D G3DSA:3.40.50.300 443 721 1.4E-76 T 14-10-2018 VEJY3_01080 ae18dde2670d664039fda314719f7f0e 721 Pfam PF13807 G-rich domain on putative tyrosine kinase 370 450 1.4E-32 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VEJY3_23961 089582ddc15c6c5bd6e5886b004254a4 379 PIRSF PIRSF001439 3 373 2.7E-105 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEJY3_23961 089582ddc15c6c5bd6e5886b004254a4 379 Gene3D G3DSA:3.30.1780.10 12 368 3.6E-77 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 VEJY3_23961 089582ddc15c6c5bd6e5886b004254a4 379 SUPERFAMILY SSF51735 6 376 6.01E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_23961 089582ddc15c6c5bd6e5886b004254a4 379 Gene3D G3DSA:3.40.50.720 153 346 3.6E-77 T 14-10-2018 VEJY3_23961 089582ddc15c6c5bd6e5886b004254a4 379 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 23 364 1.4E-74 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEJY3_14690 01a2c8e2d1bafcaa1a14d8f019cdbfd0 508 SMART SM00862 24 100 7.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_14690 01a2c8e2d1bafcaa1a14d8f019cdbfd0 508 Gene3D G3DSA:1.25.40.10 342 503 1.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_14690 01a2c8e2d1bafcaa1a14d8f019cdbfd0 508 SUPERFAMILY SSF46894 6 103 4.54E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_14690 01a2c8e2d1bafcaa1a14d8f019cdbfd0 508 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 7.4E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_14690 01a2c8e2d1bafcaa1a14d8f019cdbfd0 508 Gene3D G3DSA:1.10.10.10 2 118 9.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19476 c5ec8aef0e81362301ad0303ec58d7f2 171 Pfam PF00293 NUDIX domain 33 148 2.2E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_19476 c5ec8aef0e81362301ad0303ec58d7f2 171 SUPERFAMILY SSF55811 3 169 2.71E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_19476 c5ec8aef0e81362301ad0303ec58d7f2 171 Gene3D G3DSA:3.90.79.10 1 167 3.3E-46 T 14-10-2018 VEJY3_19476 c5ec8aef0e81362301ad0303ec58d7f2 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 Gene3D G3DSA:1.10.10.10 6 147 3.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 SUPERFAMILY SSF46785 8 145 7.68E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 Pfam PF01047 MarR family 42 98 7.4E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 SMART SM00347 34 134 1.7E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_05375 7aaee0967016749aaf4dcfce332b420b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Gene3D G3DSA:3.40.50.1970 456 642 6.1E-58 T 14-10-2018 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Gene3D G3DSA:3.40.605.10 15 216 3.8E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 SUPERFAMILY SSF56796 452 863 8.24E-115 T 14-10-2018 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Gene3D G3DSA:1.20.1090.10 643 864 1.5E-60 T 14-10-2018 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Gene3D G3DSA:3.40.309.10 217 398 3.8E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 5.9E-25 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 8.1E-113 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_11000 63da43eec2eb216d0dc9c4646a5c7bc4 900 SUPERFAMILY SSF53720 5 454 4.32E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 Gene3D G3DSA:1.10.10.10 1 136 2.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 2.1E-36 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 SUPERFAMILY SSF46785 2 131 6.71E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 Pfam PF02082 Transcriptional regulator 1 82 5.2E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VEJY3_14315 e2f9074f393a251ea9bb2190ff3b437c 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.156 T 14-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VEJY3_07280 8528268343c293998ed187859c917af9 240 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.276 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VEJY3_07280 8528268343c293998ed187859c917af9 240 Gene3D G3DSA:3.40.50.1220 8 225 7.2E-82 T 14-10-2018 VEJY3_07280 8528268343c293998ed187859c917af9 240 Pfam PF02146 Sir2 family 13 186 2.0E-51 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 VEJY3_07280 8528268343c293998ed187859c917af9 240 SUPERFAMILY SSF52467 6 234 2.91E-73 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_07280 8528268343c293998ed187859c917af9 240 Gene3D G3DSA:3.30.1600.10 22 158 7.2E-82 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VEJY3_23546 523243c025170864107e6ae010715d77 230 Gene3D G3DSA:2.60.40.2130 31 174 1.3E-11 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEJY3_23546 523243c025170864107e6ae010715d77 230 Pfam PF06468 Spondin_N 44 163 4.6E-9 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEJY3_00245 d6c7c257d4b0093b6fb3b2dc8992668f 175 SUPERFAMILY SSF52540 4 154 1.26E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00245 d6c7c257d4b0093b6fb3b2dc8992668f 175 Pfam PF01202 Shikimate kinase 13 135 9.9E-14 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEJY3_00245 d6c7c257d4b0093b6fb3b2dc8992668f 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 163 3.7E-63 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VEJY3_00245 d6c7c257d4b0093b6fb3b2dc8992668f 175 Gene3D G3DSA:3.40.50.300 2 168 2.8E-63 T 14-10-2018 VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 PIRSF PIRSF006305 1 171 4.6E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 Hamap MF_00528 Septum formation protein Maf [maf]. 1 171 22.27 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 166 8.2E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 Gene3D G3DSA:3.90.950.10 1 171 5.3E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 Pfam PF02545 Maf-like protein 1 169 3.2E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_13780 373fad831b80333e560a7cbb41fff72c 171 SUPERFAMILY SSF52972 1 169 3.66E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_01940 2d30df531b60e2b8cd8f1fc1899d8112 194 SUPERFAMILY SSF53474 6 192 1.55E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_01940 2d30df531b60e2b8cd8f1fc1899d8112 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 4.6E-69 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VEJY3_01940 2d30df531b60e2b8cd8f1fc1899d8112 194 Gene3D G3DSA:3.40.50.1820 6 194 3.2E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_18226 48bb4016d0af964cc08ffd9f4966d07a 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 9.6E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_18226 48bb4016d0af964cc08ffd9f4966d07a 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_18226 48bb4016d0af964cc08ffd9f4966d07a 209 SUPERFAMILY SSF51161 18 205 1.52E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_18226 48bb4016d0af964cc08ffd9f4966d07a 209 Gene3D G3DSA:2.160.10.10 1 209 2.6E-76 T 14-10-2018 VEJY3_11500 67a24f68e91a90faa9660dbb18a3cb99 291 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 18 257 2.2E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VEJY3_11500 67a24f68e91a90faa9660dbb18a3cb99 291 SUPERFAMILY SSF52540 18 278 8.05E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11500 67a24f68e91a90faa9660dbb18a3cb99 291 PIRSF PIRSF003092 3 283 1.1E-85 T 14-10-2018 IPR025501 ATP binding protein MinD VEJY3_11500 67a24f68e91a90faa9660dbb18a3cb99 291 Gene3D G3DSA:3.40.50.300 18 259 3.1E-59 T 14-10-2018 VEJY3_23646 74af771fd2cf339325909aeb486370fc 431 Pfam PF00561 alpha/beta hydrolase fold 50 232 6.5E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_23646 74af771fd2cf339325909aeb486370fc 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEJY3_23646 74af771fd2cf339325909aeb486370fc 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEJY3_23646 74af771fd2cf339325909aeb486370fc 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEJY3_23646 74af771fd2cf339325909aeb486370fc 431 SUPERFAMILY SSF53474 41 420 1.83E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_00635 90152f0a4781abc2c8e65f826ea00bc3 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 38 2.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00635 90152f0a4781abc2c8e65f826ea00bc3 129 Gene3D G3DSA:3.30.1300.30 42 129 1.9E-35 T 14-10-2018 VEJY3_00635 90152f0a4781abc2c8e65f826ea00bc3 129 SUPERFAMILY SSF54523 49 127 1.41E-21 T 14-10-2018 VEJY3_00635 90152f0a4781abc2c8e65f826ea00bc3 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00635 90152f0a4781abc2c8e65f826ea00bc3 129 Pfam PF02501 Type II secretion system (T2SS), protein I 52 127 1.3E-20 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VEJY3_02715 8c0e5fafb6069f9f436713e3f9b49482 239 PIRSF PIRSF004808 1 239 9.7E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VEJY3_02715 8c0e5fafb6069f9f436713e3f9b49482 239 Gene3D G3DSA:1.10.8.590 173 239 1.4E-28 T 14-10-2018 VEJY3_02715 8c0e5fafb6069f9f436713e3f9b49482 239 SUPERFAMILY SSF75217 5 176 1.31E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_02715 8c0e5fafb6069f9f436713e3f9b49482 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 9.1E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEJY3_02715 8c0e5fafb6069f9f436713e3f9b49482 239 Gene3D G3DSA:3.40.1280.10 1 163 2.8E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Pfam PF00970 Oxidoreductase FAD-binding domain 118 201 1.4E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 1.8E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Gene3D G3DSA:3.10.20.30 1 101 2.1E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Gene3D G3DSA:3.40.50.80 199 331 1.2E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 SUPERFAMILY SSF54292 2 97 2.23E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Pfam PF00175 Oxidoreductase NAD-binding domain 211 312 2.3E-21 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 SUPERFAMILY SSF52343 201 332 5.76E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 SUPERFAMILY SSF63380 76 204 8.36E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 Gene3D G3DSA:2.40.30.10 102 198 4.2E-23 T 14-10-2018 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 159 1.0E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 307 1.0E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 135 145 1.0E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 229 1.0E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 299 307 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 147 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 244 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 204 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_17921 fbc1cd1f2ab3d01e698e5886db29cf59 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 152 159 3.8E-25 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_11490 8214bbc5a6332ba4d09baed108b01bdc 126 SUPERFAMILY SSF52172 3 125 1.17E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_11490 8214bbc5a6332ba4d09baed108b01bdc 126 Pfam PF00072 Response regulator receiver domain 7 119 2.5E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11490 8214bbc5a6332ba4d09baed108b01bdc 126 Gene3D G3DSA:3.40.50.2300 1 126 5.3E-41 T 14-10-2018 VEJY3_11490 8214bbc5a6332ba4d09baed108b01bdc 126 SMART SM00448 5 119 1.0E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 2.7E-50 T 14-10-2018 VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 SUPERFAMILY SSF51735 3 240 1.93E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_22846 91f7c144cb93a07a73e06ee624de3b4c 244 Gene3D G3DSA:3.40.50.720 1 241 3.7E-64 T 14-10-2018 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 SUPERFAMILY SSF56327 143 309 9.51E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PIRSF PIRSF000102 1 316 7.6E-89 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 Gene3D G3DSA:3.90.110.10 145 311 5.3E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 Gene3D G3DSA:3.40.50.720 1 144 7.6E-42 T 14-10-2018 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 3.4E-32 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 SUPERFAMILY SSF51735 2 144 3.44E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 4.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 4.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 4.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 4.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 4.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_16266 d29aada295e994021490b53a9569e52d 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.9E-22 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Gene3D G3DSA:3.30.70.260 627 706 1.2E-12 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Pfam PF13328 HD domain 28 175 1.7E-53 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Pfam PF13291 ACT domain 627 703 6.6E-14 T 14-10-2018 IPR002912 ACT domain VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SUPERFAMILY SSF109604 3 190 1.29E-74 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Gene3D G3DSA:1.10.3210.10 3 190 3.0E-79 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Gene3D G3DSA:3.30.460.10 193 325 4.8E-46 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SUPERFAMILY SSF55021 633 703 5.83E-7 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SMART SM00471 41 153 3.0E-10 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SMART SM00954 235 345 6.9E-59 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 SUPERFAMILY SSF81301 180 393 5.89E-59 T 14-10-2018 VEJY3_00740 560f8d411d111efd53380d09a6c3f517 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Gene3D G3DSA:3.20.20.300 42 372 6.3E-104 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 78 361 5.8E-51 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Pfam PF14310 Fibronectin type III-like domain 700 771 2.7E-21 T 14-10-2018 IPR026891 Fibronectin type III-like domain VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 SUPERFAMILY SSF51445 35 395 2.32E-86 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 396 660 4.0E-42 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 SMART SM01217 700 771 6.4E-24 T 14-10-2018 IPR026891 Fibronectin type III-like domain VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Gene3D G3DSA:2.60.40.10 663 787 1.2E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 Gene3D G3DSA:3.40.50.1700 380 662 2.7E-89 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 PRINTS PR00133 Glycosyl hydrolase family 3 signature 209 225 2.3E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 115 2.3E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 PRINTS PR00133 Glycosyl hydrolase family 3 signature 178 194 2.3E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 PRINTS PR00133 Glycosyl hydrolase family 3 signature 279 297 2.3E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 PRINTS PR00133 Glycosyl hydrolase family 3 signature 132 151 2.3E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEJY3_22251 5ec784a53f0e68c623b719f571a451a6 815 SUPERFAMILY SSF52279 396 663 5.49E-40 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 239 259 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 SUPERFAMILY SSF56796 3 353 1.96E-80 T 14-10-2018 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 Gene3D G3DSA:1.20.1090.10 158 364 3.9E-76 T 14-10-2018 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 148 176 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 PIRSF PIRSF000112 1 358 7.4E-84 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 345 7.6E-61 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_08925 fddbf5f0518f9c17a38689241e1c557b 364 Gene3D G3DSA:3.40.50.1970 4 157 1.2E-35 T 14-10-2018 VEJY3_19941 47a055aa55f4ab2d66e8ba0f3b46f041 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 9.8E-51 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VEJY3_19941 47a055aa55f4ab2d66e8ba0f3b46f041 198 PIRSF PIRSF020606 1 197 6.8E-82 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VEJY3_06335 00866321fbcc7e90236709f18733c6b9 203 Pfam PF01613 Flavin reductase like domain 22 163 3.1E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VEJY3_06335 00866321fbcc7e90236709f18733c6b9 203 SUPERFAMILY SSF50475 3 198 2.26E-35 T 14-10-2018 VEJY3_06335 00866321fbcc7e90236709f18733c6b9 203 Gene3D G3DSA:2.30.110.10 1 203 2.4E-61 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_06335 00866321fbcc7e90236709f18733c6b9 203 SMART SM00903 19 167 3.8E-7 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VEJY3_04960 7178cdf0ba7dbcf63b765498225ccc79 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 9.1E-14 T 14-10-2018 IPR007140 Protein of unknown function DUF350 VEJY3_04960 7178cdf0ba7dbcf63b765498225ccc79 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 3.4E-12 T 14-10-2018 IPR007140 Protein of unknown function DUF350 VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Pfam PF00271 Helicase conserved C-terminal domain 232 325 8.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Gene3D G3DSA:1.10.10.10 500 641 1.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 SUPERFAMILY SSF52540 60 338 1.43E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Gene3D G3DSA:3.40.50.300 2 201 2.3E-68 T 14-10-2018 VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Pfam PF16124 RecQ zinc-binding 513 559 1.3E-7 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 SMART SM00487 15 211 6.1E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Gene3D G3DSA:3.40.50.300 203 450 7.5E-45 T 14-10-2018 VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 Pfam PF00270 DEAD/DEAH box helicase 22 179 9.3E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_12185 2397b1b04125e016a833c6678693c11c 641 SMART SM00490 245 326 1.7E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_20101 8496131422d7795389461a90ba57e809 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_20101 8496131422d7795389461a90ba57e809 404 Gene3D G3DSA:3.90.550.10 1 286 3.0E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_20101 8496131422d7795389461a90ba57e809 404 SUPERFAMILY SSF51161 312 395 5.3E-18 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_20101 8496131422d7795389461a90ba57e809 404 Gene3D G3DSA:2.160.10.10 287 403 6.1E-34 T 14-10-2018 VEJY3_20101 8496131422d7795389461a90ba57e809 404 SUPERFAMILY SSF53448 4 358 6.81E-80 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_20101 8496131422d7795389461a90ba57e809 404 Pfam PF00483 Nucleotidyl transferase 6 272 3.2E-72 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_20101 8496131422d7795389461a90ba57e809 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_20101 8496131422d7795389461a90ba57e809 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_20101 8496131422d7795389461a90ba57e809 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.726 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 Gene3D G3DSA:2.170.8.10 49 351 3.7E-236 T 14-10-2018 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 2.6E-211 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 SUPERFAMILY SSF53795 230 541 5.76E-128 T 14-10-2018 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 PIRSF PIRSF006294 4 541 1.1E-227 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 Gene3D G3DSA:3.90.228.20 236 526 3.7E-236 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 SUPERFAMILY SSF68923 11 228 2.44E-88 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.047 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEJY3_00590 1205201685f4775e38f18de48dbaf74c 542 Gene3D G3DSA:3.40.449.10 26 235 3.7E-236 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEJY3_17851 8d5c00d96912590b09dcc1e5731ac710 312 Gene3D G3DSA:3.40.50.1820 8 293 9.1E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17851 8d5c00d96912590b09dcc1e5731ac710 312 SUPERFAMILY SSF53474 4 312 1.34E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_17851 8d5c00d96912590b09dcc1e5731ac710 312 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 156 1.6E-6 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VEJY3_17851 8d5c00d96912590b09dcc1e5731ac710 312 Gene3D G3DSA:1.10.10.800 144 233 9.1E-74 T 14-10-2018 VEJY3_18876 96aee30fea10c96e8c96af90e2a0ef27 191 PIRSF PIRSF006102 1 191 5.5E-54 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_18876 96aee30fea10c96e8c96af90e2a0ef27 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 190 1.3E-55 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_18876 96aee30fea10c96e8c96af90e2a0ef27 191 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 24.371 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VEJY3_01345 1b31e8c4d32bca8796c5676ea9c9109c 101 SUPERFAMILY SSF57716 2 101 6.7E-37 T 14-10-2018 VEJY3_01345 1b31e8c4d32bca8796c5676ea9c9109c 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01345 1b31e8c4d32bca8796c5676ea9c9109c 101 Gene3D G3DSA:4.10.830.10 41 101 1.0E-22 T 14-10-2018 VEJY3_01345 1b31e8c4d32bca8796c5676ea9c9109c 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.0E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01345 1b31e8c4d32bca8796c5676ea9c9109c 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.824 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VEJY3_08560 63af41c6e97bca363ffd045ccde70ae5 504 Gene3D G3DSA:3.40.605.10 23 461 7.8E-154 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08560 63af41c6e97bca363ffd045ccde70ae5 504 SUPERFAMILY SSF53720 2 484 2.23E-150 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_08560 63af41c6e97bca363ffd045ccde70ae5 504 Gene3D G3DSA:3.40.309.10 249 453 7.8E-154 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_08560 63af41c6e97bca363ffd045ccde70ae5 504 Pfam PF00171 Aldehyde dehydrogenase family 14 480 3.7E-142 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_08560 63af41c6e97bca363ffd045ccde70ae5 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 5.0E-74 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VEJY3_11520 18186f4581e109173859c63e88a9e1ba 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 3.8E-56 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 5.4E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 5.4E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 5.4E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 5.4E-16 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 SUPERFAMILY SSF48179 263 445 5.78E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 Gene3D G3DSA:1.10.1040.10 261 455 3.8E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 SUPERFAMILY SSF51735 4 260 7.09E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 195 434 1.1E-80 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 166 7.5E-37 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_21376 66bfe01fdb273c69f37aad8ab5fcdf16 455 Gene3D G3DSA:3.40.50.720 1 260 2.2E-80 T 14-10-2018 VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 SMART SM00861 4 179 1.1E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 SUPERFAMILY SSF52922 190 323 9.16E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.4E-49 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 SUPERFAMILY SSF52518 4 191 5.89E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 Gene3D G3DSA:3.40.50.970 1 192 7.3E-76 T 14-10-2018 VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 Gene3D G3DSA:3.40.50.920 198 324 2.6E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_20331 c620374bb0130297a94f9b09b3b81300 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 1.6E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 SUPERFAMILY SSF56317 2 271 8.76E-39 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 Pfam PF00795 Carbon-nitrogen hydrolase 5 269 7.3E-20 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 PIRSF PIRSF006630 1 682 1.1E-140 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 SUPERFAMILY SSF52402 319 660 5.12E-46 T 14-10-2018 VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 Gene3D G3DSA:3.40.50.620 321 695 2.4E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 Gene3D G3DSA:3.60.110.10 1 275 3.4E-67 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 Pfam PF02540 NAD synthase 437 623 9.3E-27 T 14-10-2018 IPR022310 NAD/GMP synthase VEJY3_18296 6daac3a1ee8a88fe40f793fb65393c42 696 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 681 25.679 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 PIRSF PIRSF006325 4 245 1.7E-125 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 Pfam PF13649 Methyltransferase domain 63 161 1.2E-13 T 14-10-2018 VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 Gene3D G3DSA:3.40.50.150 21 245 2.6E-64 T 14-10-2018 VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.234 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 SUPERFAMILY SSF53335 23 245 1.18E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_04865 5ce77b420a6b246904506df2ab3ff6b0 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 9.3E-118 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEJY3_16561 34d384193b24d5e96618121358faad28 374 SUPERFAMILY SSF53383 3 362 3.63E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_16561 34d384193b24d5e96618121358faad28 374 Gene3D G3DSA:3.90.1150.10 8 353 7.7E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_16561 34d384193b24d5e96618121358faad28 374 PIRSF PIRSF000524 1 372 2.7E-57 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VEJY3_16561 34d384193b24d5e96618121358faad28 374 Pfam PF00266 Aminotransferase class-V 37 316 7.9E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_16561 34d384193b24d5e96618121358faad28 374 Gene3D G3DSA:3.40.640.10 16 262 7.7E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_16561 34d384193b24d5e96618121358faad28 374 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 370 213.613 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 Gene3D G3DSA:2.40.10.10 28 274 2.0E-66 T 14-10-2018 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 216 228 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 124 138 6.8E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 SMART SM00020 35 268 1.0E-71 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 Pfam PF00089 Trypsin 36 263 9.1E-60 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 Pfam PF07610 Protein of unknown function (DUF1573) 287 359 6.8E-5 T 14-10-2018 IPR011467 Protein of unknown function DUF1573 VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 SUPERFAMILY SSF50494 6 271 1.43E-69 T 14-10-2018 IPR009003 Peptidase S1, PA clan VEJY3_03930 e2268a193955b2d011f83f2f58245d1f 540 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 SUPERFAMILY SSF51430 5 265 5.24E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 Gene3D G3DSA:3.20.20.100 1 277 2.8E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 PRINTS PR00069 Aldo-keto reductase signature 125 142 2.3E-18 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.3E-18 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 PRINTS PR00069 Aldo-keto reductase signature 199 223 2.3E-18 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 PRINTS PR00069 Aldo-keto reductase signature 95 113 2.3E-18 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 PIRSF PIRSF000097 1 267 4.9E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18261 6a2537a6a0d68e3049c5bce4e982d2e6 279 Pfam PF00248 Aldo/keto reductase family 15 264 5.2E-54 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_13225 609463738561c5f6f301c8656ec64397 263 Gene3D G3DSA:1.10.287.1080 2 126 1.3E-44 T 14-10-2018 VEJY3_13225 609463738561c5f6f301c8656ec64397 263 SUPERFAMILY SSF101386 138 239 5.23E-24 T 14-10-2018 VEJY3_13225 609463738561c5f6f301c8656ec64397 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 233 4.8E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEJY3_13225 609463738561c5f6f301c8656ec64397 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 6.0E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEJY3_13225 609463738561c5f6f301c8656ec64397 263 SUPERFAMILY SSF101386 3 105 3.49E-25 T 14-10-2018 VEJY3_13225 609463738561c5f6f301c8656ec64397 263 Gene3D G3DSA:1.10.287.1080 132 263 2.4E-45 T 14-10-2018 VEJY3_21491 c158945e769b09df210f95776e183965 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 379 8.6E-90 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_21491 c158945e769b09df210f95776e183965 389 Gene3D G3DSA:3.40.50.1970 1 188 2.3E-49 T 14-10-2018 VEJY3_21491 c158945e769b09df210f95776e183965 389 Gene3D G3DSA:1.20.1090.10 190 388 3.3E-41 T 14-10-2018 VEJY3_21491 c158945e769b09df210f95776e183965 389 SUPERFAMILY SSF56796 5 388 4.19E-98 T 14-10-2018 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.4E-188 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 9.0E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 SUPERFAMILY SSF53244 326 474 3.85E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 SUPERFAMILY SSF53623 108 322 9.29E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.2E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.927 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 SUPERFAMILY SSF51984 16 109 3.4E-29 T 14-10-2018 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Pfam PF08245 Mur ligase middle domain 127 307 4.9E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Gene3D G3DSA:3.40.50.720 23 110 4.8E-34 T 14-10-2018 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Gene3D G3DSA:3.90.190.20 326 482 7.7E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02085 ceb72fbd5bf4a116ced02d4354269aff 485 Gene3D G3DSA:3.40.1190.10 111 325 7.7E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_04305 66f8b03e6f06263216c7334c7567f28f 196 Pfam PF13305 WHG domain 93 172 7.4E-11 T 14-10-2018 IPR025996 WHG domain VEJY3_04305 66f8b03e6f06263216c7334c7567f28f 196 SUPERFAMILY SSF48498 83 194 1.67E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_04305 66f8b03e6f06263216c7334c7567f28f 196 SUPERFAMILY SSF46689 4 79 1.16E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_04305 66f8b03e6f06263216c7334c7567f28f 196 Gene3D G3DSA:1.10.357.10 1 190 2.9E-42 T 14-10-2018 VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 Gene3D G3DSA:2.30.30.40 40 109 4.4E-27 T 14-10-2018 VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 SUPERFAMILY SSF82057 36 109 1.33E-23 T 14-10-2018 VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 SUPERFAMILY SSF57783 2 37 1.36E-13 T 14-10-2018 VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 Gene3D G3DSA:2.20.25.10 1 39 8.7E-18 T 14-10-2018 VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 Pfam PF08274 PhnA Zinc-Ribbon 3 30 5.4E-14 T 14-10-2018 IPR013987 PhnA protein, N-terminal VEJY3_08325 959a0854fbae5e72a86931501333e5a7 109 Pfam PF03831 PhnA domain 41 109 5.8E-26 T 14-10-2018 IPR013988 PhnA protein, C-terminal VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 SUPERFAMILY SSF51735 1 252 8.41E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 8.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 8.6E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 Gene3D G3DSA:3.40.50.720 1 252 1.3E-71 T 14-10-2018 VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 5.7E-4 T 14-10-2018 VEJY3_20586 5469e80f09e0b930c923f0e978f05b8c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 7.5E-54 T 14-10-2018 VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 SUPERFAMILY SSF53901 1 251 2.4E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 SMART SM00825 Beta-ketoacyl synthase 4 403 8.2E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.0E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 Gene3D G3DSA:3.40.47.10 258 401 3.6E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 Gene3D G3DSA:3.40.47.10 1 253 3.3E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.6E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEJY3_11315 eb12052c9c8a4b861331b5d55292b3be 403 SUPERFAMILY SSF53901 213 401 4.11E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_06905 45635f14fb6595fecdd9f27fdc243f92 472 PIRSF PIRSF002457 1 472 8.2E-118 T 14-10-2018 IPR030676 Citrate carrier CitT-related VEJY3_06905 45635f14fb6595fecdd9f27fdc243f92 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 1.7E-50 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEJY3_05150 636d5ede1b88541832b3ea51d908e30e 110 Gene3D G3DSA:1.10.150.130 10 110 3.6E-25 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_05150 636d5ede1b88541832b3ea51d908e30e 110 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 21 72 6.8E-10 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_05150 636d5ede1b88541832b3ea51d908e30e 110 SUPERFAMILY SSF56349 20 109 5.53E-16 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 SUPERFAMILY SSF47060 3 89 8.54E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 Gene3D G3DSA:1.10.287.10 2 89 3.1E-35 T 14-10-2018 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 SMART SM01387 8 88 2.0E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-30 T 14-10-2018 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 Pfam PF00312 Ribosomal protein S15 8 88 2.1E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12675 dc6fb2d323980a9930a3859245f32e65 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.631 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01515 c9a91c5adde57b1d264ae5cc9efddf46 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 6.4E-69 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_01515 c9a91c5adde57b1d264ae5cc9efddf46 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.669 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_01515 c9a91c5adde57b1d264ae5cc9efddf46 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.8E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_01515 c9a91c5adde57b1d264ae5cc9efddf46 212 SUPERFAMILY SSF55068 3 207 2.49E-80 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_01515 c9a91c5adde57b1d264ae5cc9efddf46 212 Gene3D G3DSA:3.30.1060.10 3 212 1.7E-93 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_21001 3aa2e6df1370e9ec0e857ca74a1b8bbc 512 Gene3D G3DSA:3.30.70.20 1 298 9.5E-101 T 14-10-2018 VEJY3_21001 3aa2e6df1370e9ec0e857ca74a1b8bbc 512 Pfam PF13247 4Fe-4S dicluster domain 175 271 5.2E-37 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_21001 3aa2e6df1370e9ec0e857ca74a1b8bbc 512 SUPERFAMILY SSF54862 1 486 2.2E-178 T 14-10-2018 VEJY3_21001 3aa2e6df1370e9ec0e857ca74a1b8bbc 512 Gene3D G3DSA:1.10.3650.10 358 434 1.9E-32 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 VEJY3_21001 3aa2e6df1370e9ec0e857ca74a1b8bbc 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 7.0E-30 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 VEJY3_10975 1f4c49c19dbb96900688180076138f8d 209 SUPERFAMILY SSF52833 1 200 4.75E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10975 1f4c49c19dbb96900688180076138f8d 209 Gene3D G3DSA:3.40.30.10 1 208 3.8E-59 T 14-10-2018 VEJY3_10975 1f4c49c19dbb96900688180076138f8d 209 Pfam PF13743 Thioredoxin 6 175 2.3E-22 T 14-10-2018 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 55 3.0E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 SMART SM00354 5 78 9.6E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 SUPERFAMILY SSF53822 65 328 4.12E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 237 1.0E-16 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 Gene3D G3DSA:1.10.260.40 6 66 3.3E-24 T 14-10-2018 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 Gene3D G3DSA:3.40.50.2300 159 331 2.3E-30 T 14-10-2018 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 SUPERFAMILY SSF47413 7 63 2.88E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_06230 693a9f446df16cfc09d296b20ecdb04f 331 Gene3D G3DSA:3.40.50.2300 67 156 1.4E-17 T 14-10-2018 VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 SUPERFAMILY SSF55347 136 293 9.55E-15 T 14-10-2018 VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 6 340 43.183 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 Gene3D G3DSA:3.30.360.10 148 270 1.5E-91 T 14-10-2018 VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 SUPERFAMILY SSF51735 8 159 3.36E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 129 5.2E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_08590 ffa0d4e12f22c78e56caf08db1d2df21 340 Gene3D G3DSA:3.40.50.720 11 321 1.5E-91 T 14-10-2018 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 Gene3D G3DSA:3.20.20.60 4 332 3.4E-148 T 14-10-2018 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.9E-27 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 SUPERFAMILY SSF51621 1 339 3.84E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 2.5E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 Gene3D G3DSA:2.40.33.10 71 167 3.4E-148 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 SUPERFAMILY SSF52935 323 469 5.76E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 SUPERFAMILY SSF50800 70 167 3.66E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEJY3_01730 9e4d9d00061a24706b55aa7e8539b928 470 Gene3D G3DSA:3.40.1380.20 336 467 5.5E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 4.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 SUPERFAMILY SSF52540 76 358 7.08E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.742 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.0E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 Gene3D G3DSA:3.40.50.300 217 407 4.3E-52 T 14-10-2018 VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 SMART SM00487 22 222 5.8E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 Gene3D G3DSA:3.40.50.300 1 211 5.4E-70 T 14-10-2018 VEJY3_02280 bb6a7d2361b807177f036d22474b2b36 407 SMART SM00490 260 341 1.6E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_09990 a69e2c4f163e30853739a3516a49dd42 120 SUPERFAMILY SSF55620 1 118 2.28E-41 T 14-10-2018 VEJY3_09990 a69e2c4f163e30853739a3516a49dd42 120 Gene3D G3DSA:3.30.479.10 1 120 3.9E-50 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VEJY3_09990 a69e2c4f163e30853739a3516a49dd42 120 PIRSF PIRSF006113 1 120 7.3E-54 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEJY3_09990 a69e2c4f163e30853739a3516a49dd42 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 3.6E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEJY3_09990 a69e2c4f163e30853739a3516a49dd42 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.5E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEJY3_20996 cf8088e628dfe8a618f59df2ae7a8178 240 Gene3D G3DSA:1.20.120.700 6 162 3.5E-12 T 14-10-2018 VEJY3_20996 cf8088e628dfe8a618f59df2ae7a8178 240 SUPERFAMILY SSF89155 6 166 7.72E-30 T 14-10-2018 IPR036411 TorD-like superfamily VEJY3_20996 cf8088e628dfe8a618f59df2ae7a8178 240 Pfam PF02613 Nitrate reductase delta subunit 53 159 5.7E-8 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VEJY3_20996 cf8088e628dfe8a618f59df2ae7a8178 240 Gene3D G3DSA:1.10.4070.10 71 152 3.5E-12 T 14-10-2018 VEJY3_17316 bf14b5e324e26e0fb6716d8485f858ae 218 SUPERFAMILY SSF51182 115 215 2.83E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_17316 bf14b5e324e26e0fb6716d8485f858ae 218 SUPERFAMILY SSF51182 2 128 1.3E-38 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_17316 bf14b5e324e26e0fb6716d8485f858ae 218 Gene3D G3DSA:2.60.120.10 1 215 6.3E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_17316 bf14b5e324e26e0fb6716d8485f858ae 218 Pfam PF12973 ChrR Cupin-like domain 126 211 5.9E-30 T 14-10-2018 IPR025979 ChrR-like cupin domain VEJY3_17316 bf14b5e324e26e0fb6716d8485f858ae 218 Pfam PF12973 ChrR Cupin-like domain 18 108 2.7E-40 T 14-10-2018 IPR025979 ChrR-like cupin domain VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 SUPERFAMILY SSF46785 13 156 1.79E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 Gene3D G3DSA:1.10.10.10 1 160 3.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 6.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 6.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 6.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 6.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 Pfam PF01047 MarR family 50 110 7.7E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_08250 fab26466827df6a0aceb4ff26801dff5 160 SMART SM00347 42 145 1.9E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.2E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 SMART SM01134 71 229 1.4E-43 T 14-10-2018 VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 SUPERFAMILY SSF46785 4 65 3.18E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 Pfam PF00455 DeoR C terminal sensor domain 77 227 1.3E-38 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 SUPERFAMILY SSF100950 75 229 4.4E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_20351 315bed8c2d7d3674399c3fd54a93fff8 259 SMART SM00420 6 58 9.1E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 Gene3D G3DSA:1.10.10.10 8 97 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 Pfam PF03466 LysR substrate binding domain 94 298 1.2E-33 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 SUPERFAMILY SSF53850 95 302 1.71E-35 T 14-10-2018 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 Gene3D G3DSA:3.40.190.10 104 294 8.0E-46 T 14-10-2018 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 Gene3D G3DSA:3.40.190.10 164 266 8.0E-46 T 14-10-2018 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23226 d42ba1d1ca22f70dc5d5134674ac005a 316 SUPERFAMILY SSF46785 6 88 6.7E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 SUPERFAMILY SSF143724 107 313 5.89E-63 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 6.2E-144 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Gene3D G3DSA:3.30.870.10 319 499 3.2E-71 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Gene3D G3DSA:3.30.1840.10 110 307 5.1E-74 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 5.9E-31 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.358 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Gene3D G3DSA:3.30.870.10 500 686 1.5E-73 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 SUPERFAMILY SSF56024 315 496 1.07E-53 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 6.6E-46 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 Gene3D G3DSA:1.20.58.310 9 109 1.2E-35 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 SUPERFAMILY SSF140356 4 104 4.45E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 SUPERFAMILY SSF56024 500 684 3.81E-69 T 14-10-2018 VEJY3_02620 3f2eaf57383ca51c1de008ceb643afad 696 PIRSF PIRSF015589 1 693 3.3E-251 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VEJY3_05685 8d7ae5e470fb23fe58b75a8e3eb6588f 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.8E-37 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VEJY3_01115 16ae3d81ae0b5e6edda18563cfc11da8 454 SUPERFAMILY SSF53756 9 422 3.45E-15 T 14-10-2018 VEJY3_01115 16ae3d81ae0b5e6edda18563cfc11da8 454 Gene3D G3DSA:3.40.50.2000 267 431 1.3E-7 T 14-10-2018 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Gene3D G3DSA:1.20.120.1080 371 465 4.8E-9 T 14-10-2018 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 SMART SM00847 387 477 1.1E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 4.2E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 1.6E-52 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 SUPERFAMILY SSF52540 12 432 2.94E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Pfam PF00271 Helicase conserved C-terminal domain 206 326 4.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 SMART SM00490 226 327 2.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 PIRSF PIRSF005496 1 820 0.0 T 14-10-2018 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 SMART SM00487 2 186 3.2E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Pfam PF00270 DEAD/DEAH box helicase 11 163 1.9E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Gene3D G3DSA:3.40.50.300 180 344 2.7E-50 T 14-10-2018 VEJY3_12925 3f6b68da55d75bd0365d7a2452621cdd 822 Gene3D G3DSA:3.40.50.300 1 179 1.2E-51 T 14-10-2018 VEJY3_09485 4b979235025e5a7527d6fe6385ae0e69 68 SUPERFAMILY SSF109604 7 57 4.89E-6 T 14-10-2018 VEJY3_09485 4b979235025e5a7527d6fe6385ae0e69 68 Pfam PF13487 HD domain 1 23 6.6E-6 T 14-10-2018 VEJY3_09485 4b979235025e5a7527d6fe6385ae0e69 68 Gene3D G3DSA:1.10.3210.10 1 60 7.9E-14 T 14-10-2018 VEJY3_12495 05ff2d97aa22ad2f5936eba8fd148e9c 156 Pfam PF07811 TadE-like protein 18 60 1.5E-8 T 14-10-2018 IPR012495 TadE-like VEJY3_19386 319387bef187ce6bdcade57ec485ee1c 192 Pfam PF11655 Protein of unknown function (DUF2589) 12 184 2.6E-28 T 14-10-2018 IPR024510 Protein of unknown function DUF2589 VEJY3_19386 319387bef187ce6bdcade57ec485ee1c 192 ProDom PD104924 XAC1607 AF0417 6 185 1.0E-21 T 14-10-2018 VEJY3_01600 5846b4d08fc1889267bf735c6722004b 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEJY3_01600 5846b4d08fc1889267bf735c6722004b 323 SUPERFAMILY SSF48576 4 322 1.21E-98 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEJY3_01600 5846b4d08fc1889267bf735c6722004b 323 Pfam PF00348 Polyprenyl synthetase 32 267 2.4E-73 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VEJY3_01600 5846b4d08fc1889267bf735c6722004b 323 Gene3D G3DSA:1.10.600.10 1 323 4.9E-119 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEJY3_01600 5846b4d08fc1889267bf735c6722004b 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 Gene3D G3DSA:1.25.40.10 164 336 4.1E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 Pfam PF13181 Tetratricopeptide repeat 87 117 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 Pfam PF13181 Tetratricopeptide repeat 181 212 2.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SUPERFAMILY SSF48452 42 149 1.49E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 Gene3D G3DSA:1.25.40.10 25 151 2.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SUPERFAMILY SSF48452 180 312 4.55E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SMART SM00028 180 213 0.55 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SMART SM00028 85 118 1.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SMART SM00028 278 311 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12465 76e12af2dba03703d4c2f160e44b014a 338 SMART SM00028 214 247 0.039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 Gene3D G3DSA:3.40.190.10 94 287 1.2E-9 T 14-10-2018 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 Gene3D G3DSA:3.40.190.10 166 272 1.2E-9 T 14-10-2018 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 SUPERFAMILY SSF53850 90 291 1.81E-18 T 14-10-2018 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 SUPERFAMILY SSF46785 5 107 6.39E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 Pfam PF03466 LysR substrate binding domain 89 291 1.5E-9 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17276 ec01ccca21561cc50f24fdc9b4828a9f 303 Gene3D G3DSA:1.10.10.10 3 87 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_07350 a2842bd79f9dca435233280cf0075c22 158 Pfam PF05751 FixH 7 147 3.7E-38 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH VEJY3_04455 96ce9e858de943c1c966fc9fd7148115 386 SUPERFAMILY SSF52980 1 382 5.01E-118 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_04455 96ce9e858de943c1c966fc9fd7148115 386 Gene3D G3DSA:3.40.50.10770 1 140 4.5E-60 T 14-10-2018 VEJY3_04455 96ce9e858de943c1c966fc9fd7148115 386 Gene3D G3DSA:3.40.1350.10 251 376 1.5E-77 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEJY3_04455 96ce9e858de943c1c966fc9fd7148115 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 2.9E-164 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 VEJY3_04455 96ce9e858de943c1c966fc9fd7148115 386 Gene3D G3DSA:1.10.10.680 170 250 1.5E-77 T 14-10-2018 VEJY3_22796 4db3d6693a464e41eee0ee4dbdd41e09 406 Gene3D G3DSA:1.10.3720.10 101 397 2.0E-42 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_22796 4db3d6693a464e41eee0ee4dbdd41e09 406 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 191 399 4.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_22796 4db3d6693a464e41eee0ee4dbdd41e09 406 SUPERFAMILY SSF161098 111 406 5.76E-52 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 SUPERFAMILY SSF51905 5 396 6.28E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 Pfam PF01494 FAD binding domain 5 345 6.9E-78 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.5E-27 T 14-10-2018 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.5E-27 T 14-10-2018 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.5E-27 T 14-10-2018 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.5E-27 T 14-10-2018 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 Gene3D G3DSA:3.50.50.60 5 354 2.5E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 Gene3D G3DSA:3.30.9.10 76 396 2.5E-156 T 14-10-2018 VEJY3_18136 10f1bf405cbc5f41332593bf098924ca 406 SUPERFAMILY SSF54373 178 278 1.18E-44 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 SUPERFAMILY SSF100920 383 539 4.05E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 SUPERFAMILY SSF53067 1 182 7.88E-65 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Gene3D G3DSA:3.30.420.40 179 365 8.0E-165 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.088 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Pfam PF00012 Hsp70 protein 4 601 7.6E-261 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Gene3D G3DSA:2.60.34.10 382 522 8.6E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.1E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Gene3D G3DSA:3.30.420.40 5 378 8.0E-165 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Gene3D G3DSA:3.90.640.10 228 315 8.0E-165 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 Gene3D G3DSA:1.20.1270.10 523 602 1.3E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 SUPERFAMILY SSF53067 186 381 6.79E-65 T 14-10-2018 VEJY3_03000 9b341612be12c31fce46ed8e3efddd0b 636 SUPERFAMILY SSF100934 534 607 3.92E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEJY3_04730 8cb62f49afd7f74fc639a7ffd2f1e6ef 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 6.2E-69 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VEJY3_04730 8cb62f49afd7f74fc639a7ffd2f1e6ef 236 Gene3D G3DSA:3.40.630.70 63 236 1.3E-62 T 14-10-2018 VEJY3_04730 8cb62f49afd7f74fc639a7ffd2f1e6ef 236 SUPERFAMILY SSF55729 6 228 1.75E-86 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_04730 8cb62f49afd7f74fc639a7ffd2f1e6ef 236 Gene3D G3DSA:2.30.210.20 5 62 8.3E-23 T 14-10-2018 VEJY3_04730 8cb62f49afd7f74fc639a7ffd2f1e6ef 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 90.162 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 SUPERFAMILY SSF47240 4 158 3.93E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 PIRSF PIRSF005900 1 158 2.3E-44 T 14-10-2018 IPR002177 DNA-binding protein Dps VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 1.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 Pfam PF00210 Ferritin-like domain 20 158 3.2E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEJY3_21851 5870e9dd23bbcb82bf2f9517c8cf6798 158 Gene3D G3DSA:1.20.1260.10 2 158 1.0E-53 T 14-10-2018 IPR012347 Ferritin-like VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Gene3D G3DSA:1.10.287.470 168 195 4.4E-9 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Gene3D G3DSA:2.40.30.170 231 308 4.4E-9 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Gene3D G3DSA:1.10.287.470 97 162 9.0E-11 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 SUPERFAMILY SSF111369 102 158 2.48E-6 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Gene3D G3DSA:2.40.50.100 34 95 2.2E-6 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Pfam PF13437 HlyD family secretion protein 195 299 1.7E-7 T 14-10-2018 VEJY3_22106 2be85b6c46e55a89fea3b5cd13b60434 315 Gene3D G3DSA:2.40.50.100 196 230 4.4E-9 T 14-10-2018 VEJY3_13710 a6e47721845369687526cf82db67fad8 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.7E-108 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VEJY3_13710 a6e47721845369687526cf82db67fad8 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.693 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VEJY3_13710 a6e47721845369687526cf82db67fad8 287 Gene3D G3DSA:3.40.50.300 2 158 5.2E-6 T 14-10-2018 VEJY3_13710 a6e47721845369687526cf82db67fad8 287 PIRSF PIRSF005052 1 286 1.8E-105 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VEJY3_13710 a6e47721845369687526cf82db67fad8 287 SUPERFAMILY SSF52540 1 153 8.05E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_17386 1326ed28e3fad1d53b0d734cff172233 310 Gene3D G3DSA:3.30.360.10 119 310 7.0E-59 T 14-10-2018 VEJY3_17386 1326ed28e3fad1d53b0d734cff172233 310 SUPERFAMILY SSF51735 1 166 3.18E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17386 1326ed28e3fad1d53b0d734cff172233 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.1E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_17386 1326ed28e3fad1d53b0d734cff172233 310 Gene3D G3DSA:3.40.50.720 1 118 2.3E-27 T 14-10-2018 VEJY3_17386 1326ed28e3fad1d53b0d734cff172233 310 SUPERFAMILY SSF55347 121 264 4.58E-48 T 14-10-2018 VEJY3_11070 ae21e1fbe84cbdd15e017f2c31a29f18 322 Pfam PF01032 FecCD transport family 13 318 5.5E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_11070 ae21e1fbe84cbdd15e017f2c31a29f18 322 Gene3D G3DSA:1.10.3470.10 1 321 5.0E-98 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_11070 ae21e1fbe84cbdd15e017f2c31a29f18 322 SUPERFAMILY SSF81345 5 318 7.19E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_19811 1bb8fd7f443018d291772adb45900198 130 PIRSF PIRSF006276 1 129 8.7E-37 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_19811 1bb8fd7f443018d291772adb45900198 130 Pfam PF00582 Universal stress protein family 3 125 1.6E-15 T 14-10-2018 IPR006016 UspA VEJY3_19811 1bb8fd7f443018d291772adb45900198 130 SUPERFAMILY SSF52402 3 125 1.84E-21 T 14-10-2018 VEJY3_19811 1bb8fd7f443018d291772adb45900198 130 Gene3D G3DSA:3.40.50.620 2 130 1.9E-29 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 3.9E-13 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 3.9E-13 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 3.9E-13 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.9E-13 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 7.7E-7 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-7 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 7.7E-7 T 14-10-2018 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 5.0E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 SUPERFAMILY SSF51905 3 347 1.4E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04495 35b3b5b489034ee6cd2daef05974d442 429 Gene3D G3DSA:3.50.50.100 1 405 1.4E-114 T 14-10-2018 VEJY3_17611 93971da233a46d559054e9b61a43bd2f 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 2.1E-54 T 14-10-2018 IPR014176 Phasin, subfamily 3 VEJY3_17611 93971da233a46d559054e9b61a43bd2f 115 PIRSF PIRSF028226 1 115 4.5E-56 T 14-10-2018 IPR014176 Phasin, subfamily 3 VEJY3_17611 93971da233a46d559054e9b61a43bd2f 115 Pfam PF09361 Phasin protein 8 108 5.8E-20 T 14-10-2018 IPR018968 Phasin VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 602 678 6.5E-23 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Gene3D G3DSA:1.20.120.1080 428 528 5.4E-18 T 14-10-2018 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 SUPERFAMILY SSF52540 55 547 9.43E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Pfam PF00271 Helicase conserved C-terminal domain 269 383 1.7E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Pfam PF11898 Domain of unknown function (DUF3418) 692 1276 2.2E-231 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 SMART SM00490 284 384 6.3E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Pfam PF00270 DEAD/DEAH box helicase 68 214 5.0E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Pfam PF04408 Helicase associated domain (HA2) 446 538 1.5E-17 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 SMART SM00847 444 539 1.2E-36 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 SMART SM00487 56 240 5.9E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 SMART SM00382 73 364 1.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Gene3D G3DSA:3.40.50.300 10 233 7.9E-78 T 14-10-2018 VEJY3_07045 49785078601b54ca7174f534a9d0dfe9 1278 Gene3D G3DSA:3.40.50.300 234 401 1.7E-55 T 14-10-2018 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 SUPERFAMILY SSF52540 1 640 1.06E-161 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Gene3D G3DSA:3.40.50.300 274 634 9.2E-124 T 14-10-2018 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Gene3D G3DSA:1.10.10.160 108 181 1.2E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.6E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Gene3D G3DSA:1.10.486.10 377 546 9.2E-124 T 14-10-2018 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.713 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Gene3D G3DSA:3.40.50.300 4 266 1.2E-99 T 14-10-2018 VEJY3_00190 4af7082c8210e2870c8331d50cfe2cf9 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 4.3E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 468 475 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 Gene3D G3DSA:1.10.10.1330 131 253 2.8E-25 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 Gene3D G3DSA:1.10.10.60 430 487 2.3E-23 T 14-10-2018 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 PRINTS PR00045 Sigma-54 factor signature 201 218 7.7E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 PRINTS PR00045 Sigma-54 factor signature 389 401 7.7E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 PRINTS PR00045 Sigma-54 factor signature 463 481 7.7E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 PRINTS PR00045 Sigma-54 factor signature 405 416 7.7E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 Pfam PF04963 Sigma-54 factor, core binding domain 129 318 5.4E-61 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 377 396 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 Pfam PF04552 Sigma-54, DNA binding domain 330 488 3.8E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 PIRSF PIRSF000774 1 490 2.3E-151 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_13695 1aaec839f593e0e5b28c8383807c7b1b 490 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 Pfam PF02754 Cysteine-rich domain 354 430 2.1E-7 T 14-10-2018 IPR004017 Cysteine-rich domain VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 Pfam PF02754 Cysteine-rich domain 479 565 5.5E-15 T 14-10-2018 IPR004017 Cysteine-rich domain VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 272 283 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 Pfam PF13183 4Fe-4S dicluster domain 195 285 4.7E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 Pfam PF11982 Domain of unknown function (DUF3483) 1 176 4.7E-75 T 14-10-2018 IPR021872 Protein of unknown function DUF3483 VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 SUPERFAMILY SSF46548 183 301 6.8E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_21681 51b47d43a36247d07197b5e25dcb25a2 606 Gene3D G3DSA:1.10.1060.10 173 307 8.0E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 208 34.938 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 SUPERFAMILY SSF46785 2 84 1.36E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 Gene3D G3DSA:1.10.10.10 1 89 5.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 Pfam PF04337 Protein of unknown function, DUF480 5 158 5.1E-65 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 Gene3D G3DSA:1.10.10.10 95 175 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17521 50d1230474ae3556fb46335a3c11ed2b 214 SUPERFAMILY SSF46785 90 173 3.4E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 Gene3D G3DSA:2.40.50.100 290 359 5.3E-15 T 14-10-2018 VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 SUPERFAMILY SSF52540 14 235 3.59E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 Pfam PF03459 TOBE domain 292 358 1.2E-13 T 14-10-2018 IPR005116 Transport-associated OB, type 1 VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 SUPERFAMILY SSF50331 235 358 2.43E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 Gene3D G3DSA:3.40.50.300 4 234 1.5E-55 T 14-10-2018 VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 SMART SM00382 24 207 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_19746 f724ebf50fa30f5fb1c96c3daa135833 369 Pfam PF00005 ABC transporter 17 157 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PIRSF PIRSF036388 1 432 8.1E-223 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 Gene3D G3DSA:3.40.630.10 93 432 4.7E-107 T 14-10-2018 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 SUPERFAMILY SSF53187 105 428 4.71E-101 T 14-10-2018 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 65.879 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 1.6E-103 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEJY3_02760 0829ae720d7b857e7dc045b9a4cc68c0 432 Pfam PF12404 Peptidase 5 81 2.6E-33 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 7.3E-23 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Gene3D G3DSA:3.40.1390.10 1 99 3.7E-31 T 14-10-2018 VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.3E-115 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.494 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 SUPERFAMILY SSF51161 32 316 4.86E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12025 c209254c9e1086e7f1473379e0192442 343 Gene3D G3DSA:2.160.10.10 100 308 1.7E-63 T 14-10-2018 VEJY3_09850 2928401909bf6ec88d272a3e27c8bb4b 328 Gene3D G3DSA:1.10.10.10 14 109 5.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09850 2928401909bf6ec88d272a3e27c8bb4b 328 SUPERFAMILY SSF46785 26 72 7.21E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09850 2928401909bf6ec88d272a3e27c8bb4b 328 Pfam PF13730 Helix-turn-helix domain 17 67 1.8E-14 T 14-10-2018 VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 8.1E-22 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 SUPERFAMILY SSF82866 407 604 3.27E-41 T 14-10-2018 VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Pfam PF02355 Protein export membrane protein 430 598 1.3E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Pfam PF07549 SecD/SecF GG Motif 127 150 8.0E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Gene3D G3DSA:3.30.70.3400 230 434 1.6E-47 T 14-10-2018 VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Gene3D G3DSA:3.30.1360.200 288 428 1.6E-47 T 14-10-2018 VEJY3_17586 87cd129efbbc1d7714b4f2ec370f3214 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.991 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 SMART SM00937 67 180 1.6E-68 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Gene3D G3DSA:3.30.160.20 212 293 2.8E-95 T 14-10-2018 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 SUPERFAMILY SSF75620 12 355 2.09E-137 T 14-10-2018 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Gene3D G3DSA:3.30.70.1660 115 343 2.8E-95 T 14-10-2018 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.964 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Pfam PF03462 PCRF domain 13 205 7.4E-78 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Gene3D G3DSA:1.20.58.410 3 98 1.7E-9 T 14-10-2018 VEJY3_03415 fc54d49160c5318bfb3c397438fa0192 362 Pfam PF00472 RF-1 domain 218 323 1.2E-38 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEJY3_07795 e09dba2a2a59ced93a260bd295068262 161 SUPERFAMILY SSF55729 1 159 3.66E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_07795 e09dba2a2a59ced93a260bd295068262 161 Pfam PF00583 Acetyltransferase (GNAT) family 23 132 4.1E-11 T 14-10-2018 IPR000182 GNAT domain VEJY3_07795 e09dba2a2a59ced93a260bd295068262 161 Gene3D G3DSA:3.40.630.30 2 161 1.8E-46 T 14-10-2018 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 7.4E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Gene3D G3DSA:2.30.38.10 364 439 1.2E-25 T 14-10-2018 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Gene3D G3DSA:3.40.50.980 191 363 1.7E-57 T 14-10-2018 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 SUPERFAMILY SSF56801 15 538 6.8E-130 T 14-10-2018 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Pfam PF00501 AMP-binding enzyme 38 445 1.4E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Gene3D G3DSA:3.40.50.980 28 178 3.1E-35 T 14-10-2018 VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_04075 dfa8eac9f69bb17e46badf3b38333aa5 539 Gene3D G3DSA:3.30.300.310 441 539 1.3E-29 T 14-10-2018 VEJY3_17771 1da1e5b5b7e8873f2307aaebdcd4e7cf 303 Pfam PF03595 Voltage-dependent anion channel 3 286 1.5E-23 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VEJY3_17771 1da1e5b5b7e8873f2307aaebdcd4e7cf 303 Gene3D G3DSA:1.50.10.150 1 292 1.3E-29 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 SUPERFAMILY SSF54427 10 153 2.46E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 Pfam PF07366 SnoaL-like polyketide cyclase 20 143 6.8E-10 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 Pfam PF07366 SnoaL-like polyketide cyclase 202 318 4.3E-9 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 SUPERFAMILY SSF54427 189 318 5.02E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 Gene3D G3DSA:3.10.450.50 189 322 9.5E-17 T 14-10-2018 VEJY3_22791 6227bb1f6c0d04452de7343f6b6b8b8b 323 Gene3D G3DSA:3.10.450.50 17 156 6.4E-20 T 14-10-2018 VEJY3_11120 5382d94981df42e7185199b90688bf74 182 SUPERFAMILY SSF55469 1 181 2.62E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_11120 5382d94981df42e7185199b90688bf74 182 Pfam PF00881 Nitroreductase family 8 161 2.6E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEJY3_11120 5382d94981df42e7185199b90688bf74 182 Gene3D G3DSA:3.40.109.10 1 182 9.7E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_11120 5382d94981df42e7185199b90688bf74 182 PIRSF PIRSF000232 1 182 6.9E-63 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VEJY3_12265 328af79c14bb7e72adfb897d92fcd676 219 Gene3D G3DSA:1.10.10.1320 1 105 5.9E-13 T 14-10-2018 VEJY3_12265 328af79c14bb7e72adfb897d92fcd676 219 Gene3D G3DSA:2.60.120.10 108 197 2.2E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_12265 328af79c14bb7e72adfb897d92fcd676 219 Pfam PF13490 Putative zinc-finger 9 37 1.3E-4 T 14-10-2018 IPR027383 Putative zinc-finger VEJY3_12265 328af79c14bb7e72adfb897d92fcd676 219 Pfam PF12973 ChrR Cupin-like domain 127 193 5.5E-14 T 14-10-2018 IPR025979 ChrR-like cupin domain VEJY3_12265 328af79c14bb7e72adfb897d92fcd676 219 SUPERFAMILY SSF51182 114 203 4.23E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_04055 660abda07c6b2378b17bf73f80becba3 847 Pfam PF13362 Toprim domain 210 311 1.5E-14 T 14-10-2018 IPR006171 TOPRIM domain VEJY3_04055 660abda07c6b2378b17bf73f80becba3 847 Gene3D G3DSA:3.40.1360.10 201 323 5.3E-6 T 14-10-2018 VEJY3_04055 660abda07c6b2378b17bf73f80becba3 847 SUPERFAMILY SSF52540 563 717 6.49E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04055 660abda07c6b2378b17bf73f80becba3 847 Gene3D G3DSA:3.40.50.300 537 724 1.3E-7 T 14-10-2018 VEJY3_10425 39902fa8ba2617de702b4723b73f24c0 278 SUPERFAMILY SSF56281 7 253 1.83E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_10425 39902fa8ba2617de702b4723b73f24c0 278 SMART SM00849 21 195 0.0064 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_10425 39902fa8ba2617de702b4723b73f24c0 278 Pfam PF00753 Metallo-beta-lactamase superfamily 21 88 1.9E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_10425 39902fa8ba2617de702b4723b73f24c0 278 Gene3D G3DSA:3.60.15.10 1 272 6.5E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 Gene3D G3DSA:3.40.640.10 89 348 8.3E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 Pfam PF00202 Aminotransferase class-III 57 449 3.6E-87 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 PIRSF PIRSF000521 151 183 48.0 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 PIRSF PIRSF000521 211 452 3.6E-21 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 PIRSF PIRSF000521 6 158 4.3E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 SUPERFAMILY SSF53383 57 450 3.24E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 Gene3D G3DSA:3.90.1150.10 61 444 8.3E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_16556 c4ba5135c9f6b4c47e43df9c72b6f487 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Pfam PF00994 Probable molybdopterin binding domain 366 502 1.2E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:3.40.980.10 361 512 1.6E-133 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 2.5E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 SUPERFAMILY SSF52540 7 169 3.44E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:2.40.340.10 513 583 1.6E-133 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:3.90.105.10 214 360 1.6E-133 T 14-10-2018 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 SUPERFAMILY SSF63882 191 362 7.72E-48 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:3.40.50.300 10 165 3.0E-56 T 14-10-2018 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:2.170.190.11 236 327 1.6E-133 T 14-10-2018 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 4.2E-32 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 1.8E-19 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Gene3D G3DSA:2.20.25.120 53 85 3.0E-56 T 14-10-2018 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 4.4E-43 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 SUPERFAMILY SSF63867 512 590 2.49E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.5E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 SUPERFAMILY SSF53218 363 508 1.05E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 SMART SM00852 366 503 5.1E-40 T 14-10-2018 IPR001453 MoaB/Mog domain VEJY3_07155 6d2bcd41a99a3b5a0dfae9fa6d8c1187 592 PIRSF PIRSF036618 1 592 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 Pfam PF13378 Enolase C-terminal domain-like 144 286 1.4E-26 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 Gene3D G3DSA:3.20.20.120 104 324 6.4E-58 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 SUPERFAMILY SSF54826 2 111 8.49E-32 T 14-10-2018 VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 Gene3D G3DSA:3.30.390.10 1 102 6.0E-31 T 14-10-2018 IPR029017 Enolase-like, N-terminal VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 SUPERFAMILY SSF51604 116 313 7.21E-53 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 SMART SM00922 128 219 9.4E-12 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEJY3_22336 b39d5d3497445112d57bb3e69bb685f4 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 111 3.5E-15 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VEJY3_08985 00955c8eefcc0498116e1b92984470fd 225 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_08985 00955c8eefcc0498116e1b92984470fd 225 Gene3D G3DSA:3.20.20.70 1 220 2.5E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_08985 00955c8eefcc0498116e1b92984470fd 225 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 201 4.6E-49 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_08985 00955c8eefcc0498116e1b92984470fd 225 SUPERFAMILY SSF51569 2 216 8.06E-67 T 14-10-2018 VEJY3_08985 00955c8eefcc0498116e1b92984470fd 225 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_24251 3e546f9faefff79ccc0e9b6296b18563 523 SUPERFAMILY SSF53649 20 506 2.09E-111 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_24251 3e546f9faefff79ccc0e9b6296b18563 523 Pfam PF14707 C-terminal region of aryl-sulfatase 411 503 2.3E-11 T 14-10-2018 VEJY3_24251 3e546f9faefff79ccc0e9b6296b18563 523 Pfam PF00884 Sulfatase 24 380 1.8E-64 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 4.9E-68 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 PIRSF PIRSF000398 1 274 3.4E-72 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 Gene3D G3DSA:1.10.1020.10 57 156 9.8E-84 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 SUPERFAMILY SSF53335 5 268 1.89E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14030 2ce75f0f590f69241f021ed57acfbf21 279 Gene3D G3DSA:3.40.50.150 7 239 9.8E-84 T 14-10-2018 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 SUPERFAMILY SSF64288 55 234 7.38E-47 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 9.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 9.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 Gene3D G3DSA:3.40.1410.10 69 235 1.1E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 Pfam PF07702 UTRA domain 89 226 2.5E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 SUPERFAMILY SSF46785 3 71 1.39E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 SMART SM00866 88 227 1.5E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 Gene3D G3DSA:1.10.10.10 1 67 2.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22831 16f81ce01f71c6712519fc1ada98fe47 236 SMART SM00345 8 67 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_01010 ec030fc1b99b689dcea6339943f574b8 181 SUPERFAMILY SSF51182 1 177 6.75E-80 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_01010 ec030fc1b99b689dcea6339943f574b8 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 1.0E-84 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VEJY3_01010 ec030fc1b99b689dcea6339943f574b8 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 2.3E-75 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VEJY3_01010 ec030fc1b99b689dcea6339943f574b8 181 Gene3D G3DSA:2.60.120.10 1 181 3.0E-76 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 41 59 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Gene3D G3DSA:2.40.40.20 598 713 2.9E-34 T 14-10-2018 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 SUPERFAMILY SSF53706 37 603 6.15E-191 T 14-10-2018 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 38 84 3.2E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Gene3D G3DSA:3.40.228.10 172 370 8.8E-180 T 14-10-2018 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Pfam PF00384 Molybdopterin oxidoreductase 94 517 6.0E-90 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Pfam PF01568 Molydopterin dinucleotide binding domain 601 707 8.4E-23 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Gene3D G3DSA:3.40.50.740 100 560 8.8E-180 T 14-10-2018 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 462 479 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 SUPERFAMILY SSF50692 571 711 1.11E-37 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 Gene3D G3DSA:2.20.25.90 37 90 1.0E-12 T 14-10-2018 VEJY3_20411 fb811989608e2bbb1d9d24276c8e2566 730 SMART SM00926 36 91 4.7E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21601 29b5ad129881bfb5cbc30ede0bdcc71b 28 Pfam PF01764 Lipase (class 3) 7 27 2.0E-5 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VEJY3_21601 29b5ad129881bfb5cbc30ede0bdcc71b 28 SUPERFAMILY SSF53474 6 27 5.12E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04855 20206820be5f2d6db61c98f901fd4714 246 Gene3D G3DSA:1.20.5.340 19 88 4.1E-6 T 14-10-2018 VEJY3_04855 20206820be5f2d6db61c98f901fd4714 246 Pfam PF05618 Putative ATP-dependant zinc protease 107 245 8.9E-48 T 14-10-2018 VEJY3_04855 20206820be5f2d6db61c98f901fd4714 246 SUPERFAMILY SSF50630 107 242 1.08E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_04855 20206820be5f2d6db61c98f901fd4714 246 Gene3D G3DSA:2.40.70.10 104 235 5.6E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_14670 2e89b9decf5d8c6723f4af03af0f4365 281 SUPERFAMILY SSF49354 25 166 2.88E-10 T 14-10-2018 IPR008962 PapD-like superfamily VEJY3_14670 2e89b9decf5d8c6723f4af03af0f4365 281 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 167 2.2E-5 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VEJY3_16201 42ae946bab45e06b686ae55ff5f239b0 266 SUPERFAMILY SSF161098 68 253 4.06E-31 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16201 42ae946bab45e06b686ae55ff5f239b0 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 255 2.5E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_16201 42ae946bab45e06b686ae55ff5f239b0 266 Gene3D G3DSA:1.10.3720.10 64 260 2.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10815 b1b417d95ba61b850ce8a12b87bec340 321 Gene3D G3DSA:3.40.50.2300 46 292 6.0E-101 T 14-10-2018 VEJY3_10815 b1b417d95ba61b850ce8a12b87bec340 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 6.4E-112 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein VEJY3_10815 b1b417d95ba61b850ce8a12b87bec340 321 SUPERFAMILY SSF53822 44 279 8.44E-18 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_10815 b1b417d95ba61b850ce8a12b87bec340 321 Gene3D G3DSA:3.40.50.2300 143 314 6.0E-101 T 14-10-2018 VEJY3_13785 2222a8d79355a7839d64e3645d3f4260 162 PIRSF PIRSF018472 1 162 7.0E-42 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VEJY3_13785 2222a8d79355a7839d64e3645d3f4260 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.1E-40 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VEJY3_22801 3fc4611b4f58ebd0bd8d41157743d0d7 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 270 2.4E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_22801 3fc4611b4f58ebd0bd8d41157743d0d7 341 SUPERFAMILY SSF161098 111 327 2.75E-34 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_22801 3fc4611b4f58ebd0bd8d41157743d0d7 341 Gene3D G3DSA:1.10.3720.10 78 339 2.7E-37 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23671 27c74a2400e9dcfe995917bdabd0a761 240 SUPERFAMILY SSF55469 1 238 2.62E-75 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_23671 27c74a2400e9dcfe995917bdabd0a761 240 PIRSF PIRSF005426 1 240 8.0E-85 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VEJY3_23671 27c74a2400e9dcfe995917bdabd0a761 240 Gene3D G3DSA:3.40.109.10 1 240 1.4E-79 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEJY3_23671 27c74a2400e9dcfe995917bdabd0a761 240 Pfam PF00881 Nitroreductase family 8 159 1.9E-24 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 SUPERFAMILY SSF52343 319 439 4.19E-19 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 Gene3D G3DSA:2.40.30.10 226 317 6.6E-15 T 14-10-2018 VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 Pfam PF08022 FAD-binding domain 239 315 2.6E-7 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 Pfam PF01794 Ferric reductase like transmembrane component 44 180 1.0E-18 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 Gene3D G3DSA:3.40.50.80 318 444 7.1E-18 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_22151 4bd5870ad818f2e4e5b850954a305769 444 SUPERFAMILY SSF63380 234 316 4.12E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_17676 5b38e369ea3b19a87a6e2652bbda1736 154 Gene3D G3DSA:3.40.140.10 2 152 9.3E-41 T 14-10-2018 VEJY3_17676 5b38e369ea3b19a87a6e2652bbda1736 154 SUPERFAMILY SSF53927 8 142 8.43E-32 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_17676 5b38e369ea3b19a87a6e2652bbda1736 154 PIRSF PIRSF006019 1 148 4.2E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEJY3_17676 5b38e369ea3b19a87a6e2652bbda1736 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 2.3E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEJY3_17676 5b38e369ea3b19a87a6e2652bbda1736 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 Pfam PF00117 Glutamine amidotransferase class-I 4 190 2.6E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 SUPERFAMILY SSF52317 1 191 1.57E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-5 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.4E-36 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 14-10-2018 VEJY3_14290 5df608ef4f0c938c0734998611d7f0cf 195 Gene3D G3DSA:3.40.50.880 1 193 2.1E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 Gene3D G3DSA:1.20.1050.10 89 193 1.1E-78 T 14-10-2018 VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 SUPERFAMILY SSF47616 82 208 1.99E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 Gene3D G3DSA:3.40.30.10 11 202 1.1E-78 T 14-10-2018 VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 SUPERFAMILY SSF52833 11 110 8.98E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 1.3E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEJY3_02000 c8effe465d1e9882e1098cfc41cf873f 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_05595 5b4746a07c6416502f44673970d97694 167 Pfam PF02810 SEC-C motif 1 18 1.8E-6 T 14-10-2018 IPR004027 SEC-C motif VEJY3_05595 5b4746a07c6416502f44673970d97694 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 14-10-2018 IPR004027 SEC-C motif VEJY3_05595 5b4746a07c6416502f44673970d97694 167 Gene3D G3DSA:3.10.450.50 1 167 3.3E-54 T 14-10-2018 VEJY3_05595 5b4746a07c6416502f44673970d97694 167 SUPERFAMILY SSF54427 27 128 1.36E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_05595 5b4746a07c6416502f44673970d97694 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 14-10-2018 VEJY3_05595 5b4746a07c6416502f44673970d97694 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.472 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 VEJY3_24116 3d7e74933806ddc640132391339b03a2 324 SUPERFAMILY SSF56935 31 317 1.83E-24 T 14-10-2018 VEJY3_24116 3d7e74933806ddc640132391339b03a2 324 Pfam PF13609 Gram-negative porin 7 294 1.7E-21 T 14-10-2018 VEJY3_24116 3d7e74933806ddc640132391339b03a2 324 Gene3D G3DSA:2.40.160.10 11 320 6.3E-17 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_18981 18900021e66fe922dc009bf778adb353 83 Pfam PF10688 Bacterial inner membrane protein 4 73 8.3E-9 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VEJY3_18981 18900021e66fe922dc009bf778adb353 83 Gene3D G3DSA:1.20.1280.290 27 76 3.2E-6 T 14-10-2018 VEJY3_18981 18900021e66fe922dc009bf778adb353 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 5.0E-32 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 SUPERFAMILY SSF55120 68 237 6.78E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 4.6E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 SMART SM00363 3 61 2.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 Pfam PF00849 RNA pseudouridylate synthase 68 176 5.9E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 Gene3D G3DSA:3.30.70.1560 130 220 2.4E-49 T 14-10-2018 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 SUPERFAMILY SSF55174 4 96 6.22E-12 T 14-10-2018 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 Pfam PF01479 S4 domain 4 43 3.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 Gene3D G3DSA:3.10.290.10 1 59 1.1E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_10230 6623601c39b28e66ac49e3e33a430529 312 Gene3D G3DSA:3.30.70.580 70 228 2.4E-49 T 14-10-2018 VEJY3_04345 0883ba43c4646b6c4ad37734d24c31ac 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 35 136 1.2E-42 T 14-10-2018 IPR039366 YscW/ExsB VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 Pfam PF00107 Zinc-binding dehydrogenase 199 267 1.2E-8 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 SUPERFAMILY SSF51735 164 357 6.96E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 Gene3D G3DSA:3.40.50.720 180 346 2.5E-137 T 14-10-2018 VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 146 1.5E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 SUPERFAMILY SSF50129 7 189 7.32E-61 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEJY3_22366 c07b98154f9262494f4eaef2edf0f731 400 Gene3D G3DSA:3.90.180.10 14 383 2.5E-137 T 14-10-2018 VEJY3_09515 211c4162d6df3c4bdf531fd213ad167b 501 Pfam PF03432 Relaxase/Mobilisation nuclease domain 75 195 3.9E-16 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 PRINTS PR00723 Subtilisin serine protease family (S8) signature 195 208 7.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 7.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 PRINTS PR00723 Subtilisin serine protease family (S8) signature 511 527 7.0E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 199 209 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 Pfam PF00082 Subtilase family 157 569 5.1E-47 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 SUPERFAMILY SSF52743 32 579 8.12E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 Pfam PF05922 Peptidase inhibitor I9 38 121 1.8E-6 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 Pfam PF06280 Fn3-like domain 590 694 2.4E-7 T 14-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 Gene3D G3DSA:3.40.50.200 439 582 5.4E-30 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 512 522 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_08065 1f9432f950c25249ca3817380c1c2e03 881 Gene3D G3DSA:3.40.50.200 133 381 4.2E-45 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 Gene3D G3DSA:1.10.10.10 11 148 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 7.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 7.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 7.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 7.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 SMART SM00347 30 131 1.5E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 SUPERFAMILY SSF46785 10 146 1.47E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17541 49671d6911e1ed3acc1f67a4cf62c28d 151 Pfam PF01047 MarR family 37 95 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_22971 56be8cdf1d0de824fdbe3cef040ed25d 638 Pfam PF09299 Mu transposase, C-terminal 455 514 3.3E-5 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal VEJY3_22971 56be8cdf1d0de824fdbe3cef040ed25d 638 Gene3D G3DSA:3.30.420.10 222 440 6.6E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_22971 56be8cdf1d0de824fdbe3cef040ed25d 638 Pfam PF00665 Integrase core domain 229 365 2.9E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_22971 56be8cdf1d0de824fdbe3cef040ed25d 638 SUPERFAMILY SSF53098 226 422 2.88E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_00770 f1ec1e2ee928e04ce597debc8b30f758 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 1.8E-20 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_08135 5f588c041eb8423689facce9ff7b4e24 774 Gene3D G3DSA:2.60.40.10 544 646 3.7E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_08135 5f588c041eb8423689facce9ff7b4e24 774 Gene3D G3DSA:2.60.40.10 249 342 3.9E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_08135 5f588c041eb8423689facce9ff7b4e24 774 SUPERFAMILY SSF49299 544 640 2.82E-5 T 14-10-2018 IPR035986 PKD domain superfamily VEJY3_08135 5f588c041eb8423689facce9ff7b4e24 774 Gene3D G3DSA:2.60.40.10 450 527 1.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_08135 5f588c041eb8423689facce9ff7b4e24 774 Gene3D G3DSA:2.60.40.10 361 435 1.7E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 2.2E-58 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Gene3D G3DSA:2.40.430.10 128 214 1.3E-50 T 14-10-2018 VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Gene3D G3DSA:3.10.650.10 108 278 1.3E-50 T 14-10-2018 VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 SUPERFAMILY SSF160964 24 270 2.22E-81 T 14-10-2018 VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 SUPERFAMILY SSF161098 273 513 2.75E-57 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Gene3D G3DSA:1.10.3720.10 280 523 2.9E-68 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Gene3D G3DSA:1.20.58.370 15 105 1.6E-33 T 14-10-2018 IPR035277 MalF, N-terminal VEJY3_23091 b33e0f82813578359a21d23fbef534cb 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 2.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.4E-103 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 SMART SM00316 37 122 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 Gene3D G3DSA:3.40.1260.20 403 489 1.0E-6 T 14-10-2018 VEJY3_13775 61ea8f05752f24f561d11ddfcb2f3828 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 14-10-2018 VEJY3_18346 37506685624e010be43b38099a12f935 400 SUPERFAMILY SSF103473 6 387 1.22E-51 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_18346 37506685624e010be43b38099a12f935 400 Pfam PF07690 Major Facilitator Superfamily 15 351 1.2E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_18346 37506685624e010be43b38099a12f935 400 Gene3D G3DSA:1.20.1250.20 2 386 4.0E-46 T 14-10-2018 VEJY3_18721 0d9c5d47f7ad9810b3b6cbe9322cdb95 472 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 442 7.5E-101 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 VEJY3_18721 0d9c5d47f7ad9810b3b6cbe9322cdb95 472 SUPERFAMILY SSF53807 5 451 1.62E-127 T 14-10-2018 VEJY3_18721 0d9c5d47f7ad9810b3b6cbe9322cdb95 472 Gene3D G3DSA:3.40.50.1980 24 177 1.4E-46 T 14-10-2018 VEJY3_18721 0d9c5d47f7ad9810b3b6cbe9322cdb95 472 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 55 62 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 VEJY3_18721 0d9c5d47f7ad9810b3b6cbe9322cdb95 472 Gene3D G3DSA:3.40.50.12380 178 450 1.4E-108 T 14-10-2018 VEJY3_01145 6b2eb2b9effaf55be499bf4e90efbc6d 367 Pfam PF13439 Glycosyltransferase Family 4 12 166 2.2E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_01145 6b2eb2b9effaf55be499bf4e90efbc6d 367 Pfam PF00534 Glycosyl transferases group 1 177 340 5.4E-37 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_01145 6b2eb2b9effaf55be499bf4e90efbc6d 367 SUPERFAMILY SSF53756 3 361 5.23E-81 T 14-10-2018 VEJY3_01145 6b2eb2b9effaf55be499bf4e90efbc6d 367 Gene3D G3DSA:3.40.50.2000 22 359 5.4E-75 T 14-10-2018 VEJY3_01145 6b2eb2b9effaf55be499bf4e90efbc6d 367 Gene3D G3DSA:3.40.50.2000 163 346 5.4E-75 T 14-10-2018 VEJY3_10080 18ff93f941a8075a241c493af5b7dd27 226 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 5.3E-60 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.476 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 SUPERFAMILY SSF52821 94 240 5.21E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 SMART SM00450 113 214 1.2E-21 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 Pfam PF00581 Rhodanese-like domain 115 210 1.8E-8 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 Gene3D G3DSA:3.40.250.10 97 253 1.4E-51 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_23656 bc175c61990cc35a8d5d067780e4faac 326 Gene3D G3DSA:3.30.70.100 1 96 1.8E-32 T 14-10-2018 VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 SMART SM00382 26 216 9.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 SUPERFAMILY SSF52540 1 238 2.0E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 Pfam PF00005 ABC transporter 17 168 4.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 PIRSF PIRSF039085 1 244 2.0E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_00040 86ad28b9a0700dc0f587bcdb1bf8cec8 245 Gene3D G3DSA:3.40.50.300 1 243 1.1E-76 T 14-10-2018 VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 SMART SM00079 24 244 0.0064 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.1E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 SUPERFAMILY SSF53850 1 246 7.61E-59 T 14-10-2018 VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 SMART SM00062 24 245 4.9E-74 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_00050 1f592614efc5f61a877fe28a19d57784 248 Gene3D G3DSA:3.40.190.10 95 204 1.7E-29 T 14-10-2018 VEJY3_13320 8c48931150628b53c09f25351e16573f 68 Gene3D G3DSA:3.30.1910.10 1 63 4.8E-29 T 14-10-2018 VEJY3_13320 8c48931150628b53c09f25351e16573f 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.0E-28 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VEJY3_13320 8c48931150628b53c09f25351e16573f 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-28 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 Gene3D G3DSA:3.30.450.20 34 182 1.3E-30 T 14-10-2018 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 SUPERFAMILY SSF58104 247 539 1.14E-68 T 14-10-2018 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 SMART SM00283 277 538 2.0E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 502 2.2E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 SMART SM01049 30 124 8.7E-20 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 Gene3D G3DSA:1.10.287.950 218 540 7.7E-64 T 14-10-2018 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.5E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_13525 487650bc7cea378c9a3d5d9a2add1c17 541 Pfam PF17200 Single Cache domain 2 36 185 2.1E-34 T 14-10-2018 IPR033480 Single Cache domain 2 VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SUPERFAMILY SSF81901 77 282 1.64E-26 T 14-10-2018 VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SMART SM00671 67 97 260.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SMART SM00671 207 242 0.036 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SMART SM00671 243 276 160.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SMART SM00671 171 206 19.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 SMART SM00671 135 170 2.7 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Pfam PF08238 Sel1 repeat 213 242 7.3E-4 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Pfam PF08238 Sel1 repeat 145 169 0.54 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Pfam PF08238 Sel1 repeat 194 206 31.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Pfam PF08238 Sel1 repeat 79 97 0.047 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Gene3D G3DSA:1.25.40.10 187 293 6.4E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23756 c187086871a7b2cc1f8d660beed5c613 397 Gene3D G3DSA:1.25.40.10 22 186 8.4E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_14985 7cffe7c91f8b675e3cb7ee37f9b2ddaf 164 SUPERFAMILY SSF52799 14 161 1.5E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEJY3_14985 7cffe7c91f8b675e3cb7ee37f9b2ddaf 164 Gene3D G3DSA:3.90.190.10 5 164 7.9E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEJY3_14985 7cffe7c91f8b675e3cb7ee37f9b2ddaf 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 23 128 2.9E-11 T 14-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_14985 7cffe7c91f8b675e3cb7ee37f9b2ddaf 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VEJY3_10970 1ea8592653d98d363c829161014069f7 441 Pfam PF13726 Na+-H+ antiporter family 2 88 7.6E-36 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VEJY3_10970 1ea8592653d98d363c829161014069f7 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.3E-74 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_10970 1ea8592653d98d363c829161014069f7 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 14-10-2018 VEJY3_10970 1ea8592653d98d363c829161014069f7 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 14-10-2018 VEJY3_21091 8fd4fbe9c4c99a4a41c22bfb53000b4a 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.5E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.732 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 Gene3D G3DSA:1.10.286.10 1 84 1.1E-36 T 14-10-2018 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 Pfam PF01227 GTP cyclohydrolase I 38 215 2.6E-63 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 Gene3D G3DSA:3.30.1130.10 85 217 3.9E-52 T 14-10-2018 VEJY3_17766 5acc39df72c7434ce05ec16bd40283bf 217 SUPERFAMILY SSF55620 10 216 6.37E-74 T 14-10-2018 VEJY3_19936 186b105cdfa34b0a036264d857b60896 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 151 253 2.5E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VEJY3_19936 186b105cdfa34b0a036264d857b60896 279 Gene3D G3DSA:2.60.120.330 1 279 1.2E-97 T 14-10-2018 IPR027443 Isopenicillin N synthase-like VEJY3_19936 186b105cdfa34b0a036264d857b60896 279 SUPERFAMILY SSF51197 7 276 1.3E-61 T 14-10-2018 VEJY3_19936 186b105cdfa34b0a036264d857b60896 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 2.6E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VEJY3_03055 c673883e94c8a8cb04f6de6aacd9ba91 437 Gene3D G3DSA:1.10.760.10 286 437 1.1E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_03055 c673883e94c8a8cb04f6de6aacd9ba91 437 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 173 437 1.2E-79 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VEJY3_03055 c673883e94c8a8cb04f6de6aacd9ba91 437 SUPERFAMILY SSF46626 294 437 7.69E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_17446 a7f10a500f7fc6abb52093e156c5737f 212 SMART SM00471 22 139 1.7E-8 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_17446 a7f10a500f7fc6abb52093e156c5737f 212 Gene3D G3DSA:1.10.3210.50 4 212 8.4E-68 T 14-10-2018 VEJY3_17446 a7f10a500f7fc6abb52093e156c5737f 212 SUPERFAMILY SSF109604 6 210 7.14E-60 T 14-10-2018 VEJY3_17446 a7f10a500f7fc6abb52093e156c5737f 212 Pfam PF01966 HD domain 28 129 2.5E-14 T 14-10-2018 IPR006674 HD domain VEJY3_00870 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00870 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_00870 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00870 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_23801 2326ff9638829363d9e57a7f237cc64d 214 SUPERFAMILY SSF53041 1 135 3.53E-16 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEJY3_23801 2326ff9638829363d9e57a7f237cc64d 214 SMART SM00857 3 134 1.7E-5 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEJY3_23801 2326ff9638829363d9e57a7f237cc64d 214 Pfam PF00239 Resolvase, N terminal domain 4 134 6.2E-12 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEJY3_23801 2326ff9638829363d9e57a7f237cc64d 214 Gene3D G3DSA:3.40.50.1390 3 124 1.5E-12 T 14-10-2018 VEJY3_23801 2326ff9638829363d9e57a7f237cc64d 214 Pfam PF13384 Homeodomain-like domain 152 193 6.3E-6 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 Gene3D G3DSA:3.50.50.60 113 236 1.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 Gene3D G3DSA:3.30.390.30 317 401 2.0E-20 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 SUPERFAMILY SSF55424 314 400 1.51E-20 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 298 1.7E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 Pfam PF14759 Reductase C-terminal 317 400 1.2E-20 T 14-10-2018 IPR028202 Reductase, C-terminal VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-25 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.4E-25 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.4E-25 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 2.4E-25 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 2.4E-25 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 5.9E-18 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 5.9E-18 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.9E-18 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 5.9E-18 T 14-10-2018 VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 Gene3D G3DSA:3.50.50.60 6 305 1.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06590 9ef86b0fd6180d36d586831869ba685d 401 SUPERFAMILY SSF51905 2 301 1.18E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_05805 104642175b0839aa027311e43ef1eafb 215 SUPERFAMILY SSF52540 5 200 1.54E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05805 104642175b0839aa027311e43ef1eafb 215 Gene3D G3DSA:3.40.50.300 1 207 1.3E-51 T 14-10-2018 VEJY3_05805 104642175b0839aa027311e43ef1eafb 215 SMART SM00382 28 214 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05805 104642175b0839aa027311e43ef1eafb 215 Pfam PF00005 ABC transporter 21 163 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 Gene3D G3DSA:3.40.50.720 3 264 8.5E-60 T 14-10-2018 VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 Pfam PF00106 short chain dehydrogenase 5 187 2.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 SUPERFAMILY SSF51735 1 271 3.82E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_03670 99e5cbd7918f27f3fe683bb25a775039 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 SUPERFAMILY SSF55874 311 444 3.42E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 Gene3D G3DSA:1.10.287.130 194 315 2.2E-11 T 14-10-2018 VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 319 1.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 SMART SM00388 257 320 3.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 SUPERFAMILY SSF47384 241 319 7.46E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_23536 56747ce59b9dde96ea4e22bb5d0d00fe 457 Gene3D G3DSA:3.30.565.10 327 413 4.0E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_12610 fc6d2f1abe71e0c9805568e166435165 257 Gene3D G3DSA:3.20.20.140 1 256 1.3E-83 T 14-10-2018 VEJY3_12610 fc6d2f1abe71e0c9805568e166435165 257 SUPERFAMILY SSF51556 1 255 8.57E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_12610 fc6d2f1abe71e0c9805568e166435165 257 Pfam PF01026 TatD related DNase 4 253 6.5E-65 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_12610 fc6d2f1abe71e0c9805568e166435165 257 PIRSF PIRSF005902 1 257 4.1E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_12610 fc6d2f1abe71e0c9805568e166435165 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PIRSF PIRSF000722 3 400 8.6E-138 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 SUPERFAMILY SSF53067 6 192 1.1E-63 T 14-10-2018 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 SUPERFAMILY SSF53067 158 395 1.3E-82 T 14-10-2018 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 300 313 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 377 389 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 322 338 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 7 18 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 203 224 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 PRINTS PR00471 Acetate kinase family signature 173 186 1.8E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 Hamap MF_00020 Acetate kinase [ackA]. 1 399 163.681 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 Gene3D G3DSA:3.30.420.40 5 195 1.7E-67 T 14-10-2018 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 Gene3D G3DSA:3.30.420.40 196 405 1.4E-74 T 14-10-2018 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 Pfam PF00871 Acetokinase family 7 390 7.6E-149 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_08465 cf90cca6ac81c763ee3b6d3edd93d51a 408 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEJY3_22536 a1c02781db467a5caa0950ba5b916943 429 PIRSF PIRSF006066 1 426 1.8E-141 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_22536 a1c02781db467a5caa0950ba5b916943 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 415 2.5E-113 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_14740 0361826458e8922d584537fc7ab58cfa 190 Gene3D G3DSA:3.40.470.10 1 190 2.9E-74 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_14740 0361826458e8922d584537fc7ab58cfa 190 SMART SM00986 27 183 6.2E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_14740 0361826458e8922d584537fc7ab58cfa 190 SMART SM00987 27 183 6.2E-31 T 14-10-2018 VEJY3_14740 0361826458e8922d584537fc7ab58cfa 190 SUPERFAMILY SSF52141 2 189 1.41E-58 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_14740 0361826458e8922d584537fc7ab58cfa 190 Pfam PF03167 Uracil DNA glycosylase superfamily 30 179 1.5E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEJY3_16071 4b189f774a57119d4e6d6ebd0fe39151 194 Pfam PF01810 LysE type translocator 17 188 3.9E-14 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 42.95 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 7.8E-9 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 Gene3D G3DSA:3.90.79.10 131 262 1.2E-40 T 14-10-2018 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 Pfam PF00293 NUDIX domain 137 239 1.5E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 SUPERFAMILY SSF55811 63 248 2.23E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_14750 43c882c0720d7289bf8a74ab8a70ee2b 264 Gene3D G3DSA:3.90.79.20 3 130 1.7E-33 T 14-10-2018 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 3.2E-96 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 SUPERFAMILY SSF51395 6 319 2.73E-76 T 14-10-2018 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 Gene3D G3DSA:1.20.120.1460 250 325 1.5E-23 T 14-10-2018 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 PIRSF PIRSF006621 1 323 2.1E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.849 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEJY3_13965 727769739103c46bd91f16c0979ba498 326 Gene3D G3DSA:3.20.20.70 4 245 9.8E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10955 a4f3914ea3367dfb24d45efcb2162da3 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 2.0E-68 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VEJY3_10955 a4f3914ea3367dfb24d45efcb2162da3 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.7E-74 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 Gene3D G3DSA:3.50.50.60 147 244 6.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 SUPERFAMILY SSF51971 145 399 6.47E-69 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 SUPERFAMILY SSF46548 6 157 8.37E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 Gene3D G3DSA:1.10.1060.10 11 146 1.9E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-36 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.1E-36 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.1E-36 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-36 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-36 T 14-10-2018 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 Gene3D G3DSA:3.50.50.60 245 398 6.8E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.7E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.9E-250 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VEJY3_02175 0e27c9cd2919478d6a0742dfbb6d4a44 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.2E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_13820 f50fc5e1f8441e2398ccf7c5cb21ca95 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 1.5E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_13820 f50fc5e1f8441e2398ccf7c5cb21ca95 162 SUPERFAMILY SSF54523 10 103 9.42E-6 T 14-10-2018 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 Pfam PF00677 Lumazine binding domain 100 184 2.4E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 Pfam PF00677 Lumazine binding domain 3 87 2.3E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 Gene3D G3DSA:2.40.30.20 94 190 5.2E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 Gene3D G3DSA:2.40.30.20 1 89 5.0E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 PIRSF PIRSF000498 1 203 3.5E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 SUPERFAMILY SSF63380 1 93 4.0E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_07085 54c3ed13751b62b2dbaaf5588169b6df 203 SUPERFAMILY SSF63380 93 198 5.27E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 SUPERFAMILY SSF46689 168 216 5.05E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 Pfam PF12833 Helix-turn-helix domain 188 268 1.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 SUPERFAMILY SSF51215 17 89 4.45E-6 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 SMART SM00342 182 266 1.6E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 6.6E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 6.6E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 Gene3D G3DSA:1.10.10.60 164 272 6.5E-32 T 14-10-2018 VEJY3_21346 f9243b208069a14702cef4c0f411a943 276 SUPERFAMILY SSF46689 218 270 1.18E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 2.4E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 Gene3D G3DSA:3.90.76.10 71 194 2.2E-183 T 14-10-2018 VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 Gene3D G3DSA:3.40.190.10 41 523 2.2E-183 T 14-10-2018 VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 Gene3D G3DSA:3.10.105.10 296 511 2.2E-183 T 14-10-2018 VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 PIRSF PIRSF002741 1 541 1.9E-114 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_24356 da1836ffb5c1d5aaeeae7ebabc950ce2 541 SUPERFAMILY SSF53850 36 533 5.43E-142 T 14-10-2018 VEJY3_12735 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEJY3_12735 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEJY3_12735 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 98 7.2E-37 T 14-10-2018 IPR035920 YhbY-like superfamily VEJY3_12735 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEJY3_12735 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 14-10-2018 IPR035920 YhbY-like superfamily VEJY3_01505 56a43fc9eb36e455dff2f77acd4e0cbd 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 7.3E-75 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VEJY3_01505 56a43fc9eb36e455dff2f77acd4e0cbd 183 Gene3D G3DSA:3.40.30.10 21 181 1.5E-5 T 14-10-2018 VEJY3_22576 75cdaff2901ad0b70cffeec37b4d537b 457 Pfam PF13347 MFS/sugar transport protein 12 435 9.5E-98 T 14-10-2018 VEJY3_22576 75cdaff2901ad0b70cffeec37b4d537b 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 440 2.9E-138 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VEJY3_22576 75cdaff2901ad0b70cffeec37b4d537b 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 VEJY3_22576 75cdaff2901ad0b70cffeec37b4d537b 457 Gene3D G3DSA:1.20.1250.20 15 429 2.9E-19 T 14-10-2018 VEJY3_22576 75cdaff2901ad0b70cffeec37b4d537b 457 SUPERFAMILY SSF103473 22 443 9.55E-33 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 SMART SM00382 279 480 3.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 Gene3D G3DSA:3.40.50.300 235 472 1.0E-41 T 14-10-2018 VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 Pfam PF00005 ABC transporter 22 159 7.5E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 SUPERFAMILY SSF52540 22 213 8.82E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 Pfam PF00005 ABC transporter 271 422 7.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 Gene3D G3DSA:3.40.50.300 11 226 5.3E-25 T 14-10-2018 VEJY3_21731 5a730efed3261da07b064d8ab9c03205 484 SUPERFAMILY SSF52540 234 457 1.81E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07865 8c0ee2699cf516f27ae35212adb0a42b 132 SUPERFAMILY SSF51316 2 121 6.28E-33 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_07865 8c0ee2699cf516f27ae35212adb0a42b 132 Gene3D G3DSA:2.170.150.70 1 107 3.8E-13 T 14-10-2018 VEJY3_07865 8c0ee2699cf516f27ae35212adb0a42b 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 104 1.1E-14 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 3.0E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 Gene3D G3DSA:3.30.70.1560 127 210 1.9E-56 T 14-10-2018 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 Gene3D G3DSA:3.10.290.10 1 61 3.6E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 Pfam PF01479 S4 domain 1 47 3.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 SUPERFAMILY SSF55120 60 228 1.92E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 Gene3D G3DSA:3.30.70.580 62 228 1.9E-56 T 14-10-2018 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 1.5E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 SUPERFAMILY SSF55174 1 86 3.09E-13 T 14-10-2018 VEJY3_05865 020fcf506e4af511024a8125c5f813b6 233 SMART SM00363 1 59 9.1E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Pfam PF00773 RNB domain 267 594 3.8E-108 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Gene3D G3DSA:2.40.50.140 653 764 3.9E-27 T 14-10-2018 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SUPERFAMILY SSF50249 227 650 4.68E-145 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 4.8E-11 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SMART SM00357 90 152 5.5E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SMART SM00316 650 733 3.3E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SUPERFAMILY SSF50249 651 742 4.85E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SMART SM00955 267 595 4.8E-188 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.516 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Pfam PF00575 S1 RNA binding domain 650 731 8.4E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Pfam PF08206 Ribonuclease B OB domain 91 151 2.7E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 Gene3D G3DSA:2.40.50.140 77 155 1.5E-11 T 14-10-2018 VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SUPERFAMILY SSF50249 145 244 1.63E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_14310 5e26e3a30d7ddbce6e109970d50f3941 839 SUPERFAMILY SSF50249 71 154 2.62E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 3.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 68 3.0E-28 T 14-10-2018 VEJY3_21891 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_13435 791c2705b7c503061b181cb240d79294 187 SUPERFAMILY SSF143456 1 187 2.88E-68 T 14-10-2018 VEJY3_13435 791c2705b7c503061b181cb240d79294 187 Gene3D G3DSA:3.40.1740.10 1 187 3.4E-70 T 14-10-2018 VEJY3_13435 791c2705b7c503061b181cb240d79294 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.801 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VEJY3_13435 791c2705b7c503061b181cb240d79294 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 3.3E-51 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VEJY3_10705 17694ca3d9917dfa39e2487c42b22416 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.068 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_10705 17694ca3d9917dfa39e2487c42b22416 56 SUPERFAMILY SSF57829 2 55 6.1E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEJY3_10705 17694ca3d9917dfa39e2487c42b22416 56 Pfam PF01783 Ribosomal L32p protein family 2 56 6.4E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_08935 d920470215fb37e9db26ef619072b0e9 313 SUPERFAMILY SSF53613 7 294 5.77E-60 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_08935 d920470215fb37e9db26ef619072b0e9 313 Gene3D G3DSA:3.40.1190.20 6 311 1.5E-86 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_08935 d920470215fb37e9db26ef619072b0e9 313 PIRSF PIRSF000535 4 311 5.7E-78 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VEJY3_08935 d920470215fb37e9db26ef619072b0e9 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_08935 d920470215fb37e9db26ef619072b0e9 313 Pfam PF00294 pfkB family carbohydrate kinase 15 292 3.6E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_19566 5049ac47582c6eeb99b8d89f521bbe9d 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.2E-37 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEJY3_19566 5049ac47582c6eeb99b8d89f521bbe9d 107 SUPERFAMILY SSF50022 1 106 1.65E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_19566 5049ac47582c6eeb99b8d89f521bbe9d 107 Gene3D G3DSA:2.102.10.10 1 107 2.0E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.2E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 Gene3D G3DSA:2.60.300.12 8 113 2.1E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 SUPERFAMILY SSF89360 7 99 4.12E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.663 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VEJY3_12785 4763a907b3158291d82ef3ee426f7358 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.1E-17 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 SMART SM00052 516 759 7.6E-67 T 14-10-2018 IPR001633 EAL domain VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 SMART SM00267 329 506 1.1E-42 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 Pfam PF00563 EAL domain 523 754 4.1E-59 T 14-10-2018 IPR001633 EAL domain VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 Gene3D G3DSA:3.20.20.450 520 780 1.8E-73 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 4.3E-31 T 14-10-2018 IPR000160 GGDEF domain VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 Gene3D G3DSA:3.30.70.270 334 519 1.4E-45 T 14-10-2018 VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 SUPERFAMILY SSF55073 345 507 1.1E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_18941 b8c6897f0b9d145e2f3e69ba205ae945 790 SUPERFAMILY SSF141868 522 767 4.84E-68 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 Gene3D G3DSA:1.20.58.930 368 463 4.3E-235 T 14-10-2018 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 89 346 6.0E-50 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PIRSF PIRSF001336 2 636 6.3E-250 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 42.355 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 7.6E-64 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 1.4E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 1.4E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 1.4E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.4E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 Gene3D G3DSA:3.20.20.10 67 351 4.3E-235 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 Gene3D G3DSA:2.40.37.10 14 572 4.3E-235 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_16336 12b3eb4e93811e80334c6643022dff9c 636 SUPERFAMILY SSF51419 66 348 1.44E-63 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 SUPERFAMILY SSF52833 28 142 4.23E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 2.1E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 Gene3D G3DSA:3.40.30.10 41 144 1.9E-32 T 14-10-2018 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 PIRSF PIRSF000077 38 142 2.8E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 Pfam PF00085 Thioredoxin 43 140 2.2E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 Gene3D G3DSA:2.20.28.140 2 37 1.8E-11 T 14-10-2018 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 14-10-2018 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 14-10-2018 VEJY3_19616 7ed1a6be1ea584798323a196ec2b829a 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 14-10-2018 VEJY3_10940 97bb879254d187fc0e1253fc52438936 230 PIRSF PIRSF006102 1 220 4.8E-78 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_10940 97bb879254d187fc0e1253fc52438936 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.193 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VEJY3_10940 97bb879254d187fc0e1253fc52438936 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 9.0E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 Gene3D G3DSA:2.130.10.10 18 385 2.7E-98 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.737 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 Pfam PF13360 PQQ-like domain 76 310 1.2E-49 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 322 353 2.8 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 147 178 0.057 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 62 94 1.1E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 106 138 0.021 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 280 312 71.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 243 274 180.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SMART SM00564 191 223 190.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEJY3_02795 e3d264ee8a96ff0ce06066f99b20473e 386 SUPERFAMILY SSF50998 31 375 4.97E-82 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VEJY3_04415 83f1b135690654fa951f78c417e01bb9 495 Gene3D G3DSA:3.40.605.10 21 488 3.5E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_04415 83f1b135690654fa951f78c417e01bb9 495 SUPERFAMILY SSF53720 11 493 1.7E-168 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_04415 83f1b135690654fa951f78c417e01bb9 495 Pfam PF00171 Aldehyde dehydrogenase family 32 489 2.1E-172 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_04415 83f1b135690654fa951f78c417e01bb9 495 Gene3D G3DSA:3.40.309.10 268 460 3.5E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_04415 83f1b135690654fa951f78c417e01bb9 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 Gene3D G3DSA:3.90.780.10 365 549 1.4E-44 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 37 55 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 217 234 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 490 509 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 293 313 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 421 444 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 PRINTS PR01607 Apyrase family signature 248 271 1.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 Gene3D G3DSA:3.60.21.10 33 364 8.3E-108 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 Pfam PF00149 Calcineurin-like phosphoesterase 39 264 4.4E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 SUPERFAMILY SSF56300 34 363 9.25E-89 T 14-10-2018 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 515 8.3E-29 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_05835 a362afd85694ce87a90f4294b2e950f0 567 SUPERFAMILY SSF55816 365 541 3.92E-40 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_11165 a3449fa3eb555ec712b4c97fbc39b5b9 274 Gene3D G3DSA:3.40.50.150 1 273 2.5E-78 T 14-10-2018 VEJY3_11165 a3449fa3eb555ec712b4c97fbc39b5b9 274 PIRSF PIRSF018249 1 273 3.3E-85 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VEJY3_11165 a3449fa3eb555ec712b4c97fbc39b5b9 274 Pfam PF13847 Methyltransferase domain 87 221 8.7E-13 T 14-10-2018 IPR025714 Methyltransferase domain VEJY3_11165 a3449fa3eb555ec712b4c97fbc39b5b9 274 SUPERFAMILY SSF53335 4 258 1.1E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_10115 8ad8fcb917f7aa56d8f339c0660e0aab 420 Pfam PF09375 Imelysin 40 397 3.3E-94 T 14-10-2018 IPR018976 Imelysin-like domain VEJY3_10115 8ad8fcb917f7aa56d8f339c0660e0aab 420 Gene3D G3DSA:1.20.1420.20 12 402 1.1E-82 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VEJY3_06990 8c1aaa20061a49094ea87b40fbae1570 228 Pfam PF03352 Methyladenine glycosylase 43 138 1.6E-15 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VEJY3_06990 8c1aaa20061a49094ea87b40fbae1570 228 SUPERFAMILY SSF48150 39 184 1.73E-40 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEJY3_06990 8c1aaa20061a49094ea87b40fbae1570 228 Gene3D G3DSA:1.10.340.30 37 162 9.0E-19 T 14-10-2018 VEJY3_04970 c41c5308f45d117985ad39a1a7c87f2c 387 SUPERFAMILY SSF52440 174 280 1.01E-41 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_04970 c41c5308f45d117985ad39a1a7c87f2c 387 SUPERFAMILY SSF56059 1 385 2.65E-86 T 14-10-2018 VEJY3_04970 c41c5308f45d117985ad39a1a7c87f2c 387 Gene3D G3DSA:3.30.1490.330 264 345 7.5E-27 T 14-10-2018 VEJY3_04970 c41c5308f45d117985ad39a1a7c87f2c 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.4E-158 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VEJY3_14530 cd68b5ac57f02c1ff58c2f878cc87a5d 170 Gene3D G3DSA:1.20.120.1490 40 154 4.4E-27 T 14-10-2018 VEJY3_14530 cd68b5ac57f02c1ff58c2f878cc87a5d 170 Pfam PF07813 LTXXQ motif family protein 40 149 2.4E-23 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VEJY3_14530 cd68b5ac57f02c1ff58c2f878cc87a5d 170 PIRSF PIRSF034445 1 159 1.1E-19 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Pfam PF00330 Aconitase family (aconitate hydratase) 86 562 4.5E-169 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 899 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 SUPERFAMILY SSF53732 11 626 1.57E-198 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 SUPERFAMILY SSF52016 630 899 5.3E-70 T 14-10-2018 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Pfam PF00694 Aconitase C-terminal domain 687 827 5.3E-32 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Gene3D G3DSA:1.10.1440.20 595 648 2.7E-14 T 14-10-2018 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Gene3D G3DSA:3.30.499.10 381 590 1.4E-86 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Gene3D G3DSA:3.20.19.10 649 901 8.0E-87 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 Gene3D G3DSA:3.30.499.20 9 379 3.8E-144 T 14-10-2018 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 210 223 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 224 239 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 380 394 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 431 442 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 286 299 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 156 169 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 300 313 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 180 188 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_22901 a9f4f8151f1cce92d1122677fcfcfecd 907 PRINTS PR00415 Aconitase family signature 493 506 6.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEJY3_13455 0345e346465220207b118ea21f34e104 236 PIRSF PIRSF004848 1 236 5.6E-78 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEJY3_13455 0345e346465220207b118ea21f34e104 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEJY3_13455 0345e346465220207b118ea21f34e104 236 Gene3D G3DSA:3.20.20.10 1 236 4.4E-88 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_13455 0345e346465220207b118ea21f34e104 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 2.4E-36 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_13455 0345e346465220207b118ea21f34e104 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.06 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEJY3_13455 0345e346465220207b118ea21f34e104 236 SUPERFAMILY SSF51419 1 228 3.27E-82 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.797 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.1E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 Gene3D G3DSA:3.30.1330.10 7 171 2.9E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 SUPERFAMILY SSF56042 172 341 1.64E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.1E-151 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 Gene3D G3DSA:3.90.650.10 172 346 1.2E-73 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.4E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VEJY3_11910 91ac3dc408769574b76f2aff8a55b5ab 346 SUPERFAMILY SSF55326 8 171 2.09E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEJY3_21511 09defb3a23c0eb9bc8d39a2edc8eb557 459 Pfam PF03315 Serine dehydratase beta chain 4 156 2.1E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEJY3_21511 09defb3a23c0eb9bc8d39a2edc8eb557 459 Pfam PF03313 Serine dehydratase alpha chain 187 453 1.3E-103 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEJY3_21511 09defb3a23c0eb9bc8d39a2edc8eb557 459 SUPERFAMILY SSF143548 17 156 8.89E-43 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_21511 09defb3a23c0eb9bc8d39a2edc8eb557 459 Gene3D G3DSA:3.30.1330.90 11 159 5.6E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_09360 bda18003779f05993488aca7778e39be 306 Pfam PF14321 Domain of unknown function (DUF4382) 19 166 3.2E-24 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 SUPERFAMILY SSF53850 90 299 1.99E-46 T 14-10-2018 VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 Pfam PF03466 LysR substrate binding domain 90 295 8.5E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 Gene3D G3DSA:3.40.190.10 165 267 6.9E-58 T 14-10-2018 VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 SUPERFAMILY SSF46785 8 114 1.78E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 Gene3D G3DSA:3.40.190.10 94 293 6.9E-58 T 14-10-2018 VEJY3_04000 e421770495b927fbd0f69f3d46f815c4 315 Gene3D G3DSA:1.10.10.10 5 92 2.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08375 8b65092c11027d810751930b113928aa 172 SUPERFAMILY SSF55729 60 160 3.04E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_08375 8b65092c11027d810751930b113928aa 172 Pfam PF13302 Acetyltransferase (GNAT) domain 56 148 1.1E-10 T 14-10-2018 IPR000182 GNAT domain VEJY3_08375 8b65092c11027d810751930b113928aa 172 Gene3D G3DSA:3.40.630.30 12 149 2.0E-21 T 14-10-2018 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.388 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 SUPERFAMILY SSF55120 1 256 2.16E-93 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 PIRSF PIRSF001430 1 252 9.2E-75 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 Gene3D G3DSA:3.30.70.660 105 242 2.6E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 Gene3D G3DSA:3.30.70.580 1 104 1.9E-39 T 14-10-2018 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.4E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_11280 1d8325d328dbe2a61c2c1d05d8f6590c 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 4.2E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Pfam PF13437 HlyD family secretion protein 163 263 5.0E-13 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Gene3D G3DSA:2.40.30.170 55 278 9.8E-76 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 SUPERFAMILY SSF111369 57 273 4.05E-33 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Gene3D G3DSA:1.10.287.470 99 158 9.8E-76 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 7.7E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Gene3D G3DSA:2.40.420.20 279 348 9.8E-76 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Gene3D G3DSA:2.40.50.100 65 197 9.8E-76 T 14-10-2018 VEJY3_20186 b6634be937344b5f9a8b927f918d4b16 357 Pfam PF13533 Biotin-lipoyl like 68 113 2.8E-14 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 PIRSF PIRSF000521 35 455 1.2E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 Gene3D G3DSA:3.90.1150.10 12 452 5.2E-155 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 Gene3D G3DSA:3.40.640.10 68 347 5.2E-155 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 SUPERFAMILY SSF53383 32 453 1.18E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_17206 28b83504909776818b5ded1b41ccdf4a 468 Pfam PF00202 Aminotransferase class-III 34 451 8.4E-80 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_06105 e1605f58252f84d05e89150b70fbf5b2 283 SUPERFAMILY SSF81901 7 103 1.06E-8 T 14-10-2018 VEJY3_06105 e1605f58252f84d05e89150b70fbf5b2 283 Gene3D G3DSA:1.10.287.110 221 283 3.6E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_06105 e1605f58252f84d05e89150b70fbf5b2 283 Gene3D G3DSA:1.25.40.10 3 146 5.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_06105 e1605f58252f84d05e89150b70fbf5b2 283 SUPERFAMILY SSF46565 227 280 3.53E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_08320 a121e0c9b8b9fd85be64240aafe81ddd 131 Pfam PF10000 ACT domain 2 70 2.6E-23 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 VEJY3_08320 a121e0c9b8b9fd85be64240aafe81ddd 131 SUPERFAMILY SSF55021 3 67 1.83E-17 T 14-10-2018 VEJY3_08320 a121e0c9b8b9fd85be64240aafe81ddd 131 Gene3D G3DSA:3.30.2130.10 1 131 6.3E-45 T 14-10-2018 VEJY3_08320 a121e0c9b8b9fd85be64240aafe81ddd 131 Pfam PF13840 ACT domain 72 127 2.3E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain VEJY3_08320 a121e0c9b8b9fd85be64240aafe81ddd 131 SUPERFAMILY SSF55021 69 129 1.49E-19 T 14-10-2018 VEJY3_21016 c51bd54503c822d179d868312fde6932 583 SUPERFAMILY SSF158472 169 218 4.71E-6 T 14-10-2018 VEJY3_21016 c51bd54503c822d179d868312fde6932 583 Gene3D G3DSA:3.30.565.10 450 581 4.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_21016 c51bd54503c822d179d868312fde6932 583 Gene3D G3DSA:1.20.120.960 39 139 1.5E-7 T 14-10-2018 VEJY3_21016 c51bd54503c822d179d868312fde6932 583 SUPERFAMILY SSF55874 457 578 2.62E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_21016 c51bd54503c822d179d868312fde6932 583 Pfam PF07730 Histidine kinase 385 448 2.8E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEJY3_21016 c51bd54503c822d179d868312fde6932 583 SMART SM00387 489 581 6.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_21016 c51bd54503c822d179d868312fde6932 583 PIRSF PIRSF003167 1 582 3.7E-138 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEJY3_21016 c51bd54503c822d179d868312fde6932 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 578 1.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_21016 c51bd54503c822d179d868312fde6932 583 SMART SM00304 167 220 0.0029 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_13740 4ca05cf43d5354948c140e1128818969 250 SUPERFAMILY SSF55120 7 221 1.49E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13740 4ca05cf43d5354948c140e1128818969 250 Pfam PF00849 RNA pseudouridylate synthase 23 174 2.7E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13740 4ca05cf43d5354948c140e1128818969 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13740 4ca05cf43d5354948c140e1128818969 250 Gene3D G3DSA:3.30.2350.10 4 222 4.4E-68 T 14-10-2018 VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 SMART SM00072 3 187 5.1E-76 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 Gene3D G3DSA:3.40.50.300 8 183 1.8E-74 T 14-10-2018 VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 Pfam PF00625 Guanylate kinase 5 185 1.1E-62 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 SUPERFAMILY SSF52540 3 189 3.57E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.252 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VEJY3_00750 4506273f62092db6233df5d91ef0ab96 207 Gene3D G3DSA:3.30.63.10 37 96 1.8E-74 T 14-10-2018 VEJY3_15165 f56a6629303c5a2fbde4e56539b139f4 219 Pfam PF01810 LysE type translocator 16 212 1.9E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_15165 f56a6629303c5a2fbde4e56539b139f4 219 PIRSF PIRSF006324 1 214 8.6E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_17441 28a41fab2673b821d394413e83077c49 248 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 1.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_17441 28a41fab2673b821d394413e83077c49 248 Gene3D G3DSA:1.10.260.40 6 87 1.9E-5 T 14-10-2018 VEJY3_17441 28a41fab2673b821d394413e83077c49 248 SMART SM00530 10 65 0.0017 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_17441 28a41fab2673b821d394413e83077c49 248 SUPERFAMILY SSF47413 5 68 4.55E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_17041 a7ef1f54c7a99c04731f69ecab24588a 362 Pfam PF00155 Aminotransferase class I and II 47 349 2.2E-49 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_17041 a7ef1f54c7a99c04731f69ecab24588a 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEJY3_17041 a7ef1f54c7a99c04731f69ecab24588a 362 Gene3D G3DSA:3.40.640.10 52 256 6.5E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_17041 a7ef1f54c7a99c04731f69ecab24588a 362 Gene3D G3DSA:3.90.1150.10 7 344 6.5E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_17041 a7ef1f54c7a99c04731f69ecab24588a 362 SUPERFAMILY SSF53383 16 351 1.01E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_04425 f4e25188ddbd2df1719f3706fbe5c386 244 SUPERFAMILY SSF75217 97 243 4.45E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_04425 f4e25188ddbd2df1719f3706fbe5c386 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.3E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEJY3_04425 f4e25188ddbd2df1719f3706fbe5c386 244 Gene3D G3DSA:3.40.1280.10 96 244 8.6E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_04425 f4e25188ddbd2df1719f3706fbe5c386 244 SUPERFAMILY SSF55315 4 93 1.98E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VEJY3_04425 f4e25188ddbd2df1719f3706fbe5c386 244 Gene3D G3DSA:3.30.1330.30 1 94 2.7E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VEJY3_04520 2286a5988d07a61d5dbeb135bc809b6a 402 Pfam PF02687 FtsX-like permease family 296 395 4.7E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_04520 2286a5988d07a61d5dbeb135bc809b6a 402 Pfam PF12704 MacB-like periplasmic core domain 29 209 5.1E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_12175 5b2ff0cd62b0fa7e9b6f269c33f4f383 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 5.2E-72 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 VEJY3_04770 3786b809fd114848cf18aa2a4889ec15 104 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 6.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 Gene3D G3DSA:3.40.190.10 31 338 4.2E-142 T 14-10-2018 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 Gene3D G3DSA:3.40.190.10 136 364 4.2E-142 T 14-10-2018 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 PIRSF PIRSF019574 1 369 2.0E-142 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 Pfam PF13416 Bacterial extracellular solute-binding protein 45 322 1.0E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_04390 3a8195045d6cafec96d5eb2e79768be2 369 SUPERFAMILY SSF53850 28 367 2.27E-104 T 14-10-2018 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 SUPERFAMILY SSF55174 321 414 5.5E-14 T 14-10-2018 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Gene3D G3DSA:1.10.240.10 223 325 2.5E-35 T 14-10-2018 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 2.8E-84 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 8.3E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 42 64 8.3E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 8.3E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 8.3E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Pfam PF01479 S4 domain 353 386 1.1E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 48 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Gene3D G3DSA:3.40.50.620 1 222 3.7E-89 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 415 43.811 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 SUPERFAMILY SSF52374 2 323 3.33E-100 T 14-10-2018 VEJY3_16926 55e7e8bbf67132db285170c2104f78c1 417 Gene3D G3DSA:3.10.290.10 326 417 5.2E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_01555 546f6bb91f05e98a8bd2e747d3813aba 330 Gene3D G3DSA:3.40.190.10 26 300 9.2E-116 T 14-10-2018 VEJY3_01555 546f6bb91f05e98a8bd2e747d3813aba 330 Gene3D G3DSA:3.40.190.10 126 325 9.2E-116 T 14-10-2018 VEJY3_01555 546f6bb91f05e98a8bd2e747d3813aba 330 SUPERFAMILY SSF53850 24 325 1.09E-68 T 14-10-2018 VEJY3_01555 546f6bb91f05e98a8bd2e747d3813aba 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 295 4.6E-21 T 14-10-2018 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Gene3D G3DSA:3.40.50.300 335 575 4.3E-51 T 14-10-2018 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Gene3D G3DSA:3.40.50.300 589 827 3.1E-62 T 14-10-2018 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 SUPERFAMILY SSF52540 337 573 4.71E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 552 573 7.1E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 ProSitePatterns PS00211 ABC transporters family signature. 727 741 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 SUPERFAMILY SSF52540 593 824 5.54E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 SMART SM00382 618 805 3.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 SMART SM00382 361 551 4.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Pfam PF00005 ABC transporter 353 502 9.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Pfam PF00005 ABC transporter 610 754 5.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_16486 464064af33bc3aabb74ddd390a1bece5 827 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 291 2.0E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 3.7E-14 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Pfam PF00563 EAL domain 379 611 6.0E-69 T 14-10-2018 IPR001633 EAL domain VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SMART SM00052 371 616 1.4E-96 T 14-10-2018 IPR001633 EAL domain VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Gene3D G3DSA:3.20.20.450 370 625 8.6E-88 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SUPERFAMILY SSF141868 377 625 7.85E-84 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Gene3D G3DSA:3.30.70.270 189 361 6.3E-19 T 14-10-2018 VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Pfam PF13185 GAF domain 22 143 6.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 Gene3D G3DSA:3.30.450.40 12 169 4.4E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SUPERFAMILY SSF55781 16 163 4.32E-16 T 14-10-2018 VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SMART SM00065 14 165 7.7E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SMART SM00267 192 361 2.3E-8 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19921 4be20b4365b359f0807728a3fc9661fc 640 SUPERFAMILY SSF55073 209 360 1.26E-15 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_09790 b4a3a512a0271d2fc0a65e29ca658f97 122 Pfam PF08291 Peptidase M15 18 111 5.7E-14 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 VEJY3_09790 b4a3a512a0271d2fc0a65e29ca658f97 122 SUPERFAMILY SSF55166 27 112 5.49E-18 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_09790 b4a3a512a0271d2fc0a65e29ca658f97 122 Gene3D G3DSA:3.30.1380.10 16 122 2.1E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_14490 4e41cff03dd653e50adeed4349bee074 340 Pfam PF04055 Radical SAM superfamily 117 283 1.6E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_14490 4e41cff03dd653e50adeed4349bee074 340 SUPERFAMILY SSF102114 102 324 2.62E-26 T 14-10-2018 VEJY3_14490 4e41cff03dd653e50adeed4349bee074 340 Gene3D G3DSA:3.20.20.70 51 334 4.0E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_14490 4e41cff03dd653e50adeed4349bee074 340 PIRSF PIRSF004911 3 340 1.4E-117 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VEJY3_14490 4e41cff03dd653e50adeed4349bee074 340 Pfam PF13353 4Fe-4S single cluster domain 115 184 1.8E-7 T 14-10-2018 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SUPERFAMILY SSF47226 874 980 6.54E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:3.40.50.2300 709 836 4.3E-32 T 14-10-2018 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SUPERFAMILY SSF52172 712 843 5.55E-31 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:3.30.565.10 533 699 1.0E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 6.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 6.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 6.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 6.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SUPERFAMILY SSF55874 523 697 1.57E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SUPERFAMILY SSF47384 457 535 8.83E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:1.20.58.920 182 322 3.5E-48 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:1.20.58.920 47 178 1.6E-43 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:1.10.287.130 404 532 1.1E-26 T 14-10-2018 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Gene3D G3DSA:1.20.120.160 870 984 9.4E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SMART SM00387 581 694 9.2E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Pfam PF01627 Hpt domain 896 976 4.0E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Pfam PF00072 Response regulator receiver domain 714 832 2.3E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SMART SM00388 469 534 1.2E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 SMART SM00448 712 832 4.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 694 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_19011 185b7d710059fd5a7e23aed71e40be16 986 PIRSF PIRSF036437 1 983 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.677 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 Gene3D G3DSA:3.10.410.10 469 558 6.2E-29 T 14-10-2018 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 Gene3D G3DSA:3.40.50.300 4 454 1.2E-188 T 14-10-2018 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.1E-238 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 SUPERFAMILY SSF52540 4 580 2.46E-215 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20096 7e7ea63b46f5be6f3e0ad88cf798a8b9 582 Gene3D G3DSA:3.30.1510.10 129 264 1.2E-188 T 14-10-2018 VEJY3_09455 cd5846aef3d87cdbdb5a1ef56a9f3630 354 Pfam PF01263 Aldose 1-epimerase 25 351 3.0E-94 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEJY3_09455 cd5846aef3d87cdbdb5a1ef56a9f3630 354 Gene3D G3DSA:2.70.98.10 14 353 1.1E-119 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_09455 cd5846aef3d87cdbdb5a1ef56a9f3630 354 PIRSF PIRSF005096 7 354 2.5E-117 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_09455 cd5846aef3d87cdbdb5a1ef56a9f3630 354 SUPERFAMILY SSF74650 12 352 1.07E-112 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_09455 cd5846aef3d87cdbdb5a1ef56a9f3630 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 SUPERFAMILY SSF56349 95 374 1.94E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Pfam PF00589 Phage integrase family 211 365 1.7E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Gene3D G3DSA:1.10.443.10 203 381 5.6E-17 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 96 148 5.1E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Gene3D G3DSA:3.30.160.390 1 95 2.4E-16 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Pfam PF13356 Arm DNA-binding domain 3 85 6.3E-10 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VEJY3_06280 03d893d3b1546c8f59f52462da933a70 398 Gene3D G3DSA:1.10.150.130 96 197 1.1E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 125 212 2.7E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 6.7E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 Gene3D G3DSA:3.40.50.2300 1 103 9.8E-26 T 14-10-2018 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 566 2.0E-141 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 SUPERFAMILY SSF52794 2 101 1.15E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 Gene3D G3DSA:3.40.50.2300 112 223 7.6E-41 T 14-10-2018 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 124 207 4.9E-36 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEJY3_20171 58667e6ce6f5e8d0ca4268356a5da0a1 577 SUPERFAMILY SSF52794 122 223 9.24E-37 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_05695 4d080efebb40bec2865e3419537a63c4 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.3E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_05695 4d080efebb40bec2865e3419537a63c4 331 SMART SM00382 32 238 6.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05695 4d080efebb40bec2865e3419537a63c4 331 Gene3D G3DSA:3.40.50.300 2 331 1.7E-73 T 14-10-2018 VEJY3_05695 4d080efebb40bec2865e3419537a63c4 331 Pfam PF00005 ABC transporter 24 187 2.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_05695 4d080efebb40bec2865e3419537a63c4 331 SUPERFAMILY SSF52540 4 268 1.64E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00980 98512cb3c53f9ded166d85ec735a826a 172 Gene3D G3DSA:2.40.160.20 22 172 2.7E-14 T 14-10-2018 VEJY3_00980 98512cb3c53f9ded166d85ec735a826a 172 Pfam PF13505 Outer membrane protein beta-barrel domain 13 172 3.5E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_00980 98512cb3c53f9ded166d85ec735a826a 172 SUPERFAMILY SSF56925 25 172 4.45E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_02565 7ed0c1d3275c746ed06b6de3882e09e1 110 SUPERFAMILY SSF55331 1 110 2.07E-37 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_02565 7ed0c1d3275c746ed06b6de3882e09e1 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 7.7E-39 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 VEJY3_02565 7ed0c1d3275c746ed06b6de3882e09e1 110 Gene3D G3DSA:3.30.429.10 1 110 3.8E-45 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 Gene3D G3DSA:3.40.50.20 1 114 3.1E-40 T 14-10-2018 VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 SUPERFAMILY SSF56059 98 288 7.25E-51 T 14-10-2018 VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.5E-66 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.354 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VEJY3_16351 8072d5fe58f9d4a0aa716ad59ea95642 301 Gene3D G3DSA:3.30.470.80 182 299 2.1E-42 T 14-10-2018 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 SUPERFAMILY SSF53597 1 159 3.23E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 4.5E-14 T 14-10-2018 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.5E-14 T 14-10-2018 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.5E-14 T 14-10-2018 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.5E-14 T 14-10-2018 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 Pfam PF00186 Dihydrofolate reductase 3 159 1.1E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 PIRSF PIRSF000194 1 159 1.1E-61 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VEJY3_01630 cf70e4c3fb860ea10b9709fe858c4e7b 159 Gene3D G3DSA:3.40.430.10 1 159 1.8E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_05635 aef932d77af575b4ee10ca2d6970e687 78 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.1E-9 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 Pfam PF00171 Aldehyde dehydrogenase family 15 474 5.4E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 Gene3D G3DSA:3.40.309.10 255 444 3.7E-185 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 Gene3D G3DSA:3.40.605.10 21 469 3.7E-185 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_21581 6dfc6dd0f21624d97bb7908db5ae845c 479 SUPERFAMILY SSF53720 7 478 4.45E-175 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82866 808 1034 4.45E-44 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82693 39 132 9.42E-26 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82714 184 273 2.09E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82693 565 674 1.73E-22 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82866 299 500 8.5E-48 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82714 725 810 7.06E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 3.2E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 SUPERFAMILY SSF82693 136 332 6.63E-22 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 14-10-2018 VEJY3_17686 085c2c2d973f45acd6fd49cc3b43a256 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 14-10-2018 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.1E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 SMART SM00883 2 95 1.4E-40 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 SUPERFAMILY SSF50129 1 96 1.29E-27 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.46 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 2.9E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_16681 bd62fa859fe1b5bff21743fc83040dfd 96 Gene3D G3DSA:2.30.33.40 1 96 1.1E-32 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VEJY3_14880 ae9081e3aa855cf5506afa2884cc22b6 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 204 2.6E-9 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VEJY3_14880 ae9081e3aa855cf5506afa2884cc22b6 264 SUPERFAMILY SSF53335 13 246 1.41E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14880 ae9081e3aa855cf5506afa2884cc22b6 264 Gene3D G3DSA:3.40.50.150 2 244 1.6E-21 T 14-10-2018 VEJY3_14880 ae9081e3aa855cf5506afa2884cc22b6 264 PIRSF PIRSF028177 1 264 1.5E-70 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 Gene3D G3DSA:1.10.10.60 175 226 3.1E-16 T 14-10-2018 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 Pfam PF12833 Helix-turn-helix domain 200 278 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 SUPERFAMILY SSF46689 230 281 7.62E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 SUPERFAMILY SSF46689 177 227 2.33E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 SMART SM00342 194 277 2.4E-35 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 Gene3D G3DSA:1.10.10.60 227 282 1.5E-19 T 14-10-2018 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 2.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_08995 8bc57e706d6cebc5635e402e771f1fa9 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 2.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_12215 26c2b6ef98c70ccf7763658516beed3e 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.2E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_12215 26c2b6ef98c70ccf7763658516beed3e 198 PIRSF PIRSF006102 1 198 8.9E-67 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_12215 26c2b6ef98c70ccf7763658516beed3e 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 6.1E-108 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VEJY3_12215 26c2b6ef98c70ccf7763658516beed3e 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VEJY3_16781 02157cd0e6738232975b98cb9c37791a 166 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 97 6.5E-17 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VEJY3_16781 02157cd0e6738232975b98cb9c37791a 166 SUPERFAMILY SSF53146 1 118 4.32E-21 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_16781 02157cd0e6738232975b98cb9c37791a 166 Gene3D G3DSA:3.30.420.130 3 109 4.1E-16 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 Gene3D G3DSA:3.90.1150.10 287 425 3.4E-31 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 228 242 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 PIRSF PIRSF001434 21 425 2.2E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 33 422 2.2E-106 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 SUPERFAMILY SSF53383 79 422 1.22E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_11085 5f4da2a0b22e8d519cf86bbc7eb98855 425 Gene3D G3DSA:3.40.640.10 30 286 9.9E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_16821 7c0df78cda8a94759dc477b524678d84 281 Gene3D G3DSA:1.25.40.10 96 269 5.8E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16821 7c0df78cda8a94759dc477b524678d84 281 SUPERFAMILY SSF48452 172 279 7.59E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16821 7c0df78cda8a94759dc477b524678d84 281 Pfam PF13181 Tetratricopeptide repeat 221 252 4.8E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_16821 7c0df78cda8a94759dc477b524678d84 281 SMART SM00028 220 253 0.0037 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_16821 7c0df78cda8a94759dc477b524678d84 281 SMART SM00028 186 219 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 SUPERFAMILY SSF69864 177 402 3.4E-88 T 14-10-2018 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 Gene3D G3DSA:3.40.50.620 9 177 2.1E-145 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 Gene3D G3DSA:3.90.1260.10 68 356 2.1E-145 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 Gene3D G3DSA:1.20.5.470 368 403 5.0E-8 T 14-10-2018 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.713 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 SUPERFAMILY SSF52402 7 170 2.87E-47 T 14-10-2018 VEJY3_14095 efda24cfcca7a14ac1f503edb4feff12 404 Pfam PF00764 Arginosuccinate synthase 10 396 1.2E-145 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEJY3_12880 4dea47d05cf79961f6c3f90f433e4241 409 SUPERFAMILY SSF111352 12 383 7.98E-106 T 14-10-2018 VEJY3_12880 4dea47d05cf79961f6c3f90f433e4241 409 Gene3D G3DSA:1.10.3430.10 2 408 9.8E-120 T 14-10-2018 IPR029020 Ammonium/urea transporter VEJY3_12880 4dea47d05cf79961f6c3f90f433e4241 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VEJY3_12880 4dea47d05cf79961f6c3f90f433e4241 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.2E-101 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VEJY3_12585 8515fc633cf56d46fc70cda4365418f2 239 Pfam PF01048 Phosphorylase superfamily 15 217 3.0E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEJY3_12585 8515fc633cf56d46fc70cda4365418f2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.688 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEJY3_12585 8515fc633cf56d46fc70cda4365418f2 239 SUPERFAMILY SSF53167 3 234 8.38E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEJY3_12585 8515fc633cf56d46fc70cda4365418f2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12585 8515fc633cf56d46fc70cda4365418f2 239 Gene3D G3DSA:3.40.50.1580 1 238 5.9E-76 T 14-10-2018 VEJY3_23241 26025aaccd707d0cfbf8fdd98f5a1d4f 261 SUPERFAMILY SSF52540 3 230 2.83E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23241 26025aaccd707d0cfbf8fdd98f5a1d4f 261 SMART SM00382 26 214 6.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23241 26025aaccd707d0cfbf8fdd98f5a1d4f 261 Pfam PF00005 ABC transporter 22 166 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23241 26025aaccd707d0cfbf8fdd98f5a1d4f 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23241 26025aaccd707d0cfbf8fdd98f5a1d4f 261 Gene3D G3DSA:3.40.50.300 1 253 3.7E-62 T 14-10-2018 VEJY3_23966 be8a5a69157e61491d8a6d5bb468cc4e 277 Gene3D G3DSA:1.10.10.60 162 270 3.0E-20 T 14-10-2018 VEJY3_23966 be8a5a69157e61491d8a6d5bb468cc4e 277 Pfam PF12833 Helix-turn-helix domain 188 264 5.5E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_23966 be8a5a69157e61491d8a6d5bb468cc4e 277 SMART SM00342 178 262 2.9E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_23966 be8a5a69157e61491d8a6d5bb468cc4e 277 SUPERFAMILY SSF46689 215 266 1.43E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_12955 49a99692948a1a37d31fc055b9913090 264 PIRSF PIRSF000388 1 264 8.6E-100 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEJY3_12955 49a99692948a1a37d31fc055b9913090 264 SUPERFAMILY SSF51621 3 262 1.93E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_12955 49a99692948a1a37d31fc055b9913090 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 4.0E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEJY3_12955 49a99692948a1a37d31fc055b9913090 264 Gene3D G3DSA:3.20.20.60 1 263 4.0E-105 T 14-10-2018 VEJY3_12955 49a99692948a1a37d31fc055b9913090 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.042 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEJY3_16596 7de82992e7e57303e7d795d0da086c41 466 Gene3D G3DSA:3.30.9.10 124 354 2.1E-58 T 14-10-2018 VEJY3_16596 7de82992e7e57303e7d795d0da086c41 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 9.4E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_16596 7de82992e7e57303e7d795d0da086c41 466 SUPERFAMILY SSF51905 19 307 1.05E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_16596 7de82992e7e57303e7d795d0da086c41 466 Gene3D G3DSA:3.50.50.60 30 395 2.1E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 42.151 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 SUPERFAMILY SSF47598 1 35 8.89E-14 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-24 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 PIRSF PIRSF019401 1 180 1.1E-53 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 6.1E-46 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 Gene3D G3DSA:1.20.1380.10 65 180 2.1E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 Gene3D G3DSA:1.10.1220.10 1 41 1.2E-23 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VEJY3_03810 85f55c2c23f0e796aba8f276e249743d 180 SUPERFAMILY SSF82808 66 179 1.09E-48 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VEJY3_16211 231712f8deca171d1109cee93d6b286e 285 Gene3D G3DSA:3.40.1190.20 2 284 9.6E-103 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_16211 231712f8deca171d1109cee93d6b286e 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 1.3E-94 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEJY3_16211 231712f8deca171d1109cee93d6b286e 285 SUPERFAMILY SSF53613 16 278 5.14E-82 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Gene3D G3DSA:3.40.50.1220 214 346 2.8E-38 T 14-10-2018 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 PIRSF PIRSF004983 3 572 9.2E-184 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Gene3D G3DSA:3.40.50.970 4 199 8.0E-57 T 14-10-2018 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 397 7.1E-39 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 31.989 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Gene3D G3DSA:3.40.50.970 366 569 2.0E-46 T 14-10-2018 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 SUPERFAMILY SSF52518 388 562 6.16E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 547 2.5E-6 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 SUPERFAMILY SSF52518 9 179 2.94E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_04265 425a484db2a0e06589f325e8df030a90 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 144 1.5E-30 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.1E-20 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 45.992 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 SUPERFAMILY SSF50104 115 163 1.7E-5 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 SUPERFAMILY SSF82679 1 100 5.62E-29 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 SMART SM00738 1 101 8.9E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_03750 45c24d671e402ae766600a635e4cbf38 166 Gene3D G3DSA:3.30.70.940 1 165 1.8E-51 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEJY3_20166 7c4b1d53160507aec7a95452ec3dede8 324 PIRSF PIRSF000535 6 315 3.6E-97 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VEJY3_20166 7c4b1d53160507aec7a95452ec3dede8 324 SUPERFAMILY SSF53613 10 297 5.46E-71 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_20166 7c4b1d53160507aec7a95452ec3dede8 324 Pfam PF00294 pfkB family carbohydrate kinase 18 298 6.5E-52 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_20166 7c4b1d53160507aec7a95452ec3dede8 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_20166 7c4b1d53160507aec7a95452ec3dede8 324 Gene3D G3DSA:3.40.1190.20 5 315 5.3E-97 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 7.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 7.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 7.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 7.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 Gene3D G3DSA:1.10.240.10 191 304 5.8E-139 T 14-10-2018 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 SUPERFAMILY SSF52374 5 334 1.69E-90 T 14-10-2018 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.1E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.527 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VEJY3_14295 4194df5e1c07f7b1fa950f563917c9b6 338 Gene3D G3DSA:3.40.50.620 5 333 5.8E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 Pfam PF13654 AAA domain 106 288 9.2E-25 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 Gene3D G3DSA:3.30.230.10 291 532 3.3E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 8.6E-11 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 8.6E-11 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 8.6E-11 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 8.6E-11 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 Gene3D G3DSA:3.40.50.300 27 202 5.1E-11 T 14-10-2018 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 504 1.5E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEJY3_07555 5a29e142f394026407ff3dac554f750d 546 SUPERFAMILY SSF54211 314 506 9.86E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_07700 bd1805547e1f4e62b44e7e92af1d4387 365 SUPERFAMILY SSF161098 154 346 2.75E-40 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07700 bd1805547e1f4e62b44e7e92af1d4387 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.6E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_07700 bd1805547e1f4e62b44e7e92af1d4387 365 Gene3D G3DSA:1.10.3720.10 147 363 2.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 SUPERFAMILY SSF46894 119 217 3.68E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 7.5E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 SMART SM00448 1 113 1.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 SMART SM00862 146 216 3.3E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 Gene3D G3DSA:1.10.10.10 123 219 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 SUPERFAMILY SSF52172 1 119 6.12E-38 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08540 8f5df85a960fe9d151f2c7f44809dcc9 220 Gene3D G3DSA:3.40.50.2300 1 122 9.5E-36 T 14-10-2018 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 226 238 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 210 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 226 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 ProSitePatterns PS00622 LuxR-type HTH domain signature. 210 237 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 SMART SM00421 193 250 1.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 SUPERFAMILY SSF46894 183 253 2.65E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 Gene3D G3DSA:1.10.10.10 196 260 6.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22511 51971d73d28ba8de014999d6f4c32ddb 267 Pfam PF00196 Bacterial regulatory proteins, luxR family 195 249 1.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 SMART SM00116 247 294 0.005 T 14-10-2018 IPR000644 CBS domain VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 SMART SM00116 170 218 7.1E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 Pfam PF04982 HPP family 3 95 4.5E-18 T 14-10-2018 IPR007065 HPP VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 Pfam PF00571 CBS domain 240 294 1.8E-8 T 14-10-2018 IPR000644 CBS domain VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 Pfam PF00571 CBS domain 164 217 7.6E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 SUPERFAMILY SSF54631 158 295 3.28E-27 T 14-10-2018 VEJY3_21031 0ef8fe723ca6a3a086660d7d36b2bb63 298 Gene3D G3DSA:3.10.580.10 156 294 4.3E-28 T 14-10-2018 VEJY3_16601 116806e8478231d5e0f0e16af413d2c3 374 Gene3D G3DSA:3.40.630.10 113 374 2.6E-72 T 14-10-2018 VEJY3_16601 116806e8478231d5e0f0e16af413d2c3 374 SMART SM00631 112 354 1.4E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_16601 116806e8478231d5e0f0e16af413d2c3 374 SUPERFAMILY SSF53187 106 372 1.89E-63 T 14-10-2018 VEJY3_16601 116806e8478231d5e0f0e16af413d2c3 374 Gene3D G3DSA:2.60.40.3120 1 112 9.1E-43 T 14-10-2018 VEJY3_16601 116806e8478231d5e0f0e16af413d2c3 374 Pfam PF00246 Zinc carboxypeptidase 126 341 7.0E-24 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_21991 f7c8f7a4fdaf0cd605c9d9a0e923e792 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 9.0E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VEJY3_02690 27e8831c18d37563e0753409e95f88ba 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 3.0E-97 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEJY3_02690 27e8831c18d37563e0753409e95f88ba 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.351 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEJY3_02690 27e8831c18d37563e0753409e95f88ba 377 Gene3D G3DSA:3.20.20.105 1 370 3.2E-174 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEJY3_02690 27e8831c18d37563e0753409e95f88ba 377 SUPERFAMILY SSF51713 3 366 2.88E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEJY3_19181 69141d53b031dad60e9f2d84a8edf74b 128 Gene3D G3DSA:1.20.120.550 1 125 1.6E-29 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VEJY3_19181 69141d53b031dad60e9f2d84a8edf74b 128 SUPERFAMILY SSF161084 2 125 1.44E-32 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VEJY3_19181 69141d53b031dad60e9f2d84a8edf74b 128 Pfam PF01124 MAPEG family 3 119 4.5E-25 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 97.616 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 Gene3D G3DSA:1.20.1050.90 121 298 2.0E-81 T 14-10-2018 VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 3.5E-37 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 SUPERFAMILY SSF52540 1 344 1.48E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00065 b4516fa66f33534dd7766732a365077c 359 Gene3D G3DSA:3.40.50.300 8 332 2.0E-81 T 14-10-2018 VEJY3_23116 02c5647133fde9db1535e9cbd03d355b 177 Gene3D G3DSA:3.10.560.10 21 161 2.7E-23 T 14-10-2018 VEJY3_23116 02c5647133fde9db1535e9cbd03d355b 177 SUPERFAMILY SSF142984 103 139 6.54E-5 T 14-10-2018 VEJY3_23116 02c5647133fde9db1535e9cbd03d355b 177 Gene3D G3DSA:3.30.1950.10 31 103 2.7E-23 T 14-10-2018 VEJY3_23116 02c5647133fde9db1535e9cbd03d355b 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 2.9E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEJY3_23116 02c5647133fde9db1535e9cbd03d355b 177 Pfam PF10531 SLBB domain 105 155 2.1E-15 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_06745 fbe2cc2d7ac0042f6ef9843497b8c966 393 ProSitePatterns PS00571 Amidases signature. 107 138 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 VEJY3_06745 fbe2cc2d7ac0042f6ef9843497b8c966 393 Pfam PF01425 Amidase 20 192 1.8E-47 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VEJY3_06745 fbe2cc2d7ac0042f6ef9843497b8c966 393 SUPERFAMILY SSF75304 16 387 4.32E-77 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VEJY3_06745 fbe2cc2d7ac0042f6ef9843497b8c966 393 Gene3D G3DSA:3.90.1300.10 14 390 1.6E-79 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VEJY3_09950 11d47766720e83e508db7d4f02abd0d1 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 8.8E-50 T 14-10-2018 IPR021147 Protein of unknown function DUF697 VEJY3_03435 4f29f8687512816acb1740ba841ce3d6 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.193 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEJY3_03435 4f29f8687512816acb1740ba841ce3d6 283 SUPERFAMILY SSF51569 2 278 3.94E-104 T 14-10-2018 VEJY3_03435 4f29f8687512816acb1740ba841ce3d6 283 Pfam PF00793 DAHP synthetase I family 10 275 6.0E-70 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEJY3_03435 4f29f8687512816acb1740ba841ce3d6 283 Gene3D G3DSA:3.20.20.70 1 283 2.0E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_21531 46298f51b477603861b2be1ec3ab9802 94 Gene3D G3DSA:3.30.2270.10 1 94 1.7E-36 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 VEJY3_21531 46298f51b477603861b2be1ec3ab9802 94 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 84 4.8E-35 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 SUPERFAMILY SSF54862 5 121 6.58E-24 T 14-10-2018 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 Gene3D G3DSA:3.20.20.70 8 65 6.0E-15 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 Gene3D G3DSA:3.80.30.10 129 305 1.5E-61 T 14-10-2018 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 PIRSF PIRSF000371 1 305 4.6E-118 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 Pfam PF04055 Radical SAM superfamily 29 237 6.6E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 Gene3D G3DSA:3.30.70.20 66 123 2.3E-12 T 14-10-2018 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 Pfam PF13353 4Fe-4S single cluster domain 22 175 6.2E-13 T 14-10-2018 VEJY3_08425 32d705ce329bee8ac0237f6a8d3b8bd2 305 SUPERFAMILY SSF102114 98 277 2.16E-16 T 14-10-2018 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 SMART SM00344 4 112 1.2E-14 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 9.0E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 Gene3D G3DSA:3.30.70.920 64 146 1.7E-12 T 14-10-2018 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 SUPERFAMILY SSF46785 4 58 5.94E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 Gene3D G3DSA:1.10.10.10 1 57 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 Pfam PF01037 Lrp/AsnC ligand binding domain 76 141 1.4E-8 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_17951 7f6a28bae737cc178fe7f0e0ffbfc168 150 SUPERFAMILY SSF54909 68 144 6.97E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_11805 ab7e2fb12b4bd8cfd2e50d3edfdc3619 679 SUPERFAMILY SSF52540 145 644 8.88E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11805 ab7e2fb12b4bd8cfd2e50d3edfdc3619 679 Pfam PF01935 Domain of unknown function DUF87 152 291 1.3E-20 T 14-10-2018 IPR002789 Helicase HerA, central domain VEJY3_11805 ab7e2fb12b4bd8cfd2e50d3edfdc3619 679 Gene3D G3DSA:3.40.50.300 440 652 6.2E-52 T 14-10-2018 VEJY3_11805 ab7e2fb12b4bd8cfd2e50d3edfdc3619 679 Gene3D G3DSA:3.40.50.300 135 252 5.6E-20 T 14-10-2018 VEJY3_03955 3f34a4659ebfd74d1b418e6399686489 185 PIRSF PIRSF004982 2 185 2.8E-58 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEJY3_03955 3f34a4659ebfd74d1b418e6399686489 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 161 3.0E-42 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEJY3_03955 3f34a4659ebfd74d1b418e6399686489 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 152 2.9E-35 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEJY3_12605 3d48f5a9e79fa8d0e3fddd9f03c1cd76 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEJY3_12605 3d48f5a9e79fa8d0e3fddd9f03c1cd76 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 2.1E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEJY3_12605 3d48f5a9e79fa8d0e3fddd9f03c1cd76 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.4E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.70.1430 555 647 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82693 41 130 8.37E-23 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82866 290 489 1.19E-45 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:1.20.1640.10 501 1001 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82866 782 1008 1.96E-46 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.2090.10 178 268 3.2E-285 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82693 136 323 1.19E-21 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82693 553 650 2.96E-19 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82714 182 263 2.62E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.1E-272 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.70.1320 134 325 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:1.20.1640.10 10 500 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.70.1440 648 843 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 SUPERFAMILY SSF82714 701 783 8.5E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.70.1430 40 794 3.2E-285 T 14-10-2018 VEJY3_00175 d1c8fa1c8e04a38f393f7decdd3a3223 1040 Gene3D G3DSA:3.30.2090.10 698 786 3.2E-285 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEJY3_02540 f91574e6277940fbe2bd5eb24cba7405 308 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 28 125 2.9E-19 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VEJY3_02540 f91574e6277940fbe2bd5eb24cba7405 308 Gene3D G3DSA:2.60.120.330 16 307 2.1E-76 T 14-10-2018 IPR027443 Isopenicillin N synthase-like VEJY3_02540 f91574e6277940fbe2bd5eb24cba7405 308 SUPERFAMILY SSF51197 22 303 5.08E-69 T 14-10-2018 VEJY3_02540 f91574e6277940fbe2bd5eb24cba7405 308 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 188 295 2.2E-17 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 Gene3D G3DSA:3.40.190.10 169 264 2.7E-10 T 14-10-2018 VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 Gene3D G3DSA:1.10.10.10 5 90 8.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 SUPERFAMILY SSF46785 4 84 5.12E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 Gene3D G3DSA:3.40.190.10 136 277 2.7E-10 T 14-10-2018 VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 SUPERFAMILY SSF53850 98 290 3.8E-19 T 14-10-2018 VEJY3_19861 61320afd4d282cbaa7e7a194e36b43cc 295 Pfam PF03466 LysR substrate binding domain 124 291 3.8E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 395 405 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 184 195 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 Pfam PF00082 Subtilase family 180 433 8.3E-51 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 SUPERFAMILY SSF52743 165 453 2.23E-80 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 Gene3D G3DSA:3.40.50.200 126 459 4.8E-101 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 SUPERFAMILY SSF49265 447 556 1.75E-17 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 Gene3D G3DSA:2.60.40.10 460 559 1.1E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 SMART SM00060 459 537 2.2E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 PRINTS PR00723 Subtilisin serine protease family (S8) signature 179 198 7.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 PRINTS PR00723 Subtilisin serine protease family (S8) signature 394 410 7.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 7.7E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 Pfam PF00041 Fibronectin type III domain 461 538 1.1E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 VEJY3_05310 e5ed0f09dd0c832c33a45e4c633f0317 800 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 Gene3D G3DSA:3.40.190.10 132 236 3.5E-50 T 14-10-2018 VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 263 6.0E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 Gene3D G3DSA:3.40.190.10 38 268 3.5E-50 T 14-10-2018 VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 Pfam PF01464 Transglycosylase SLT domain 302 414 1.7E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 SMART SM00062 43 280 1.6E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 SUPERFAMILY SSF53955 297 456 1.38E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 Gene3D G3DSA:1.10.530.10 296 464 2.1E-37 T 14-10-2018 VEJY3_02515 c9f3babe278099d776d1d37d113870af 493 SUPERFAMILY SSF53850 38 268 4.73E-38 T 14-10-2018 VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 Gene3D G3DSA:1.10.3720.10 28 291 2.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 Gene3D G3DSA:1.10.3720.10 310 565 4.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 558 1.1E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 288 1.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 SUPERFAMILY SSF161098 30 284 7.85E-44 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16581 8d925d82d29fbdf01d0ec28a36cfcb84 574 SUPERFAMILY SSF161098 305 557 1.11E-31 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18816 ed4aa2e46b421d010b2a62e3d6cc9667 478 PIRSF PIRSF006066 50 478 5.1E-71 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_18816 ed4aa2e46b421d010b2a62e3d6cc9667 478 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 55 473 8.1E-78 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 SUPERFAMILY SSF51064 143 198 1.11E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.744 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 SUPERFAMILY SSF58014 44 142 5.89E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 PRINTS PR00773 GrpE protein signature 95 110 4.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 PRINTS PR00773 GrpE protein signature 177 196 4.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 PRINTS PR00773 GrpE protein signature 150 165 4.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 PRINTS PR00773 GrpE protein signature 67 83 4.2E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 Pfam PF01025 GrpE 37 198 6.3E-56 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 Gene3D G3DSA:2.30.22.10 142 198 7.9E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VEJY3_02990 ad2fd080239320977b456d1bc69ab815 198 Gene3D G3DSA:3.90.20.20 35 141 2.5E-33 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.296 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 Gene3D G3DSA:3.40.50.9100 1 149 4.6E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 SUPERFAMILY SSF52304 4 146 3.79E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 Pfam PF01220 Dehydroquinase class II 6 142 3.1E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 5.0E-68 T 14-10-2018 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 PIRSF PIRSF001399 3 149 4.4E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_14625 e8b4b7beae6630b0a2fff265133a11eb 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 7.2E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PIRSF PIRSF016599 5 489 5.0E-214 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 SUPERFAMILY SSF53187 15 486 1.39E-60 T 14-10-2018 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 Pfam PF07687 Peptidase dimerisation domain 211 296 1.1E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 Gene3D G3DSA:3.40.630.10 1 234 3.8E-63 T 14-10-2018 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 Gene3D G3DSA:3.40.630.10 379 490 9.4E-24 T 14-10-2018 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.8E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEJY3_03085 9178510b1d1c68e8c838ce4faeb47ecf 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 1.4E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_01880 204ec608aa0a28949148c1cfc3d275bb 203 PIRSF PIRSF006158 1 203 8.5E-67 T 14-10-2018 IPR016476 SH3 domain protein VEJY3_01880 204ec608aa0a28949148c1cfc3d275bb 203 Pfam PF08239 Bacterial SH3 domain 33 82 5.2E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VEJY3_01880 204ec608aa0a28949148c1cfc3d275bb 203 SMART SM00287 20 86 7.7E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VEJY3_01880 204ec608aa0a28949148c1cfc3d275bb 203 Gene3D G3DSA:2.30.30.40 31 86 9.5E-8 T 14-10-2018 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.7E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 Pfam PF01235 Sodium:alanine symporter family 48 453 1.1E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02270 8225c2c07436486a15e1c960900b01e9 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_02345 00b49a34fb50dfd49544ba67f4e0879b 226 Gene3D G3DSA:3.40.600.10 1 222 1.1E-54 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VEJY3_02345 00b49a34fb50dfd49544ba67f4e0879b 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 4.3E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VEJY3_02345 00b49a34fb50dfd49544ba67f4e0879b 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 146.435 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VEJY3_02345 00b49a34fb50dfd49544ba67f4e0879b 226 SMART SM00927 53 151 9.9E-64 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VEJY3_02345 00b49a34fb50dfd49544ba67f4e0879b 226 SUPERFAMILY SSF52980 2 220 8.58E-80 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_17156 7fa892680496d3fce21ff52239ba1791 98 PIRSF PIRSF002736 1 97 3.7E-41 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VEJY3_17156 7fa892680496d3fce21ff52239ba1791 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 8.0E-31 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VEJY3_17156 7fa892680496d3fce21ff52239ba1791 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.977 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VEJY3_17156 7fa892680496d3fce21ff52239ba1791 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 1.0E-19 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VEJY3_17156 7fa892680496d3fce21ff52239ba1791 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 5.4E-36 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VEJY3_09620 627cde41e277c7e6257b4ae5a47c72ab 58 Pfam PF11665 Protein of unknown function (DUF3265) 31 58 4.0E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 SMART SM00421 146 203 2.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 Gene3D G3DSA:3.40.50.12740 2 209 2.7E-60 T 14-10-2018 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 SUPERFAMILY SSF52172 2 132 5.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10205 855130c6adb0bc5c8264a92fa8411857 214 SMART SM00448 2 115 3.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 Gene3D G3DSA:3.40.190.10 93 286 1.4E-49 T 14-10-2018 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 Gene3D G3DSA:1.10.10.10 1 84 5.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 SUPERFAMILY SSF46785 1 81 3.49E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 Pfam PF03466 LysR substrate binding domain 91 290 3.5E-35 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 SUPERFAMILY SSF53850 91 294 1.15E-33 T 14-10-2018 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06615 4e61f85164a6130df029cf4ca9053fce 297 Gene3D G3DSA:3.40.190.10 162 266 1.4E-49 T 14-10-2018 VEJY3_16726 7994cc144803e7a10d812e6db741d451 158 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 26.697 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16726 7994cc144803e7a10d812e6db741d451 158 Gene3D G3DSA:3.30.1060.10 1 156 1.9E-41 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16726 7994cc144803e7a10d812e6db741d451 158 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 5.0E-43 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_16726 7994cc144803e7a10d812e6db741d451 158 SUPERFAMILY SSF55068 1 148 2.09E-48 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEJY3_08970 1759848767f93bec4c59fc11a659c0d8 766 Pfam PF01228 Glycine radical 647 748 1.4E-26 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VEJY3_08970 1759848767f93bec4c59fc11a659c0d8 766 ProSitePatterns PS00850 Glycine radical domain signature. 737 745 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEJY3_08970 1759848767f93bec4c59fc11a659c0d8 766 Pfam PF02901 Pyruvate formate lyase-like 3 627 7.4E-195 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VEJY3_08970 1759848767f93bec4c59fc11a659c0d8 766 SUPERFAMILY SSF51998 2 765 2.99E-207 T 14-10-2018 VEJY3_08970 1759848767f93bec4c59fc11a659c0d8 766 Gene3D G3DSA:3.20.70.20 2 766 2.6E-270 T 14-10-2018 VEJY3_00260 0433cc78c810c3b72a578d3899d75128 174 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 14 167 1.9E-59 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEJY3_00260 0433cc78c810c3b72a578d3899d75128 174 SUPERFAMILY SSF144064 6 170 5.23E-52 T 14-10-2018 VEJY3_00260 0433cc78c810c3b72a578d3899d75128 174 Gene3D G3DSA:3.40.1570.10 2 174 1.2E-57 T 14-10-2018 VEJY3_00260 0433cc78c810c3b72a578d3899d75128 174 PIRSF PIRSF030840 1 173 6.2E-59 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEJY3_00260 0433cc78c810c3b72a578d3899d75128 174 Pfam PF06228 Haem utilisation ChuX/HutX 31 167 2.3E-34 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Pfam PF00005 ABC transporter 336 469 1.8E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Pfam PF00005 ABC transporter 19 185 9.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Gene3D G3DSA:3.40.50.300 4 279 1.1E-67 T 14-10-2018 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 SUPERFAMILY SSF52540 311 518 2.52E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Gene3D G3DSA:1.10.287.380 555 638 1.2E-28 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Pfam PF12848 ABC transporter 224 297 2.0E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 SMART SM00382 28 230 5.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 SMART SM00382 344 514 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 3.4E-21 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 Gene3D G3DSA:3.40.50.300 281 551 5.0E-69 T 14-10-2018 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07575 3ddc9e80baef8553d67fe05b5d06a755 639 SUPERFAMILY SSF52540 3 239 8.13E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 Gene3D G3DSA:3.30.70.20 95 158 3.0E-9 T 14-10-2018 VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 SUPERFAMILY SSF54862 32 158 5.44E-18 T 14-10-2018 VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 4.6E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 2.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.831 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_17646 5ba34f2848772b2db5db7ca9cf798041 161 Gene3D G3DSA:3.30.70.20 30 82 3.7E-10 T 14-10-2018 VEJY3_21821 21ed165a47cd679546ca99b98f482e84 296 SUPERFAMILY SSF161111 8 214 5.23E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_21821 21ed165a47cd679546ca99b98f482e84 296 Gene3D G3DSA:1.20.1510.10 10 214 3.8E-20 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_21821 21ed165a47cd679546ca99b98f482e84 296 Pfam PF01545 Cation efflux family 13 214 3.1E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 Gene3D G3DSA:3.30.9.10 98 270 6.8E-57 T 14-10-2018 VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 Gene3D G3DSA:3.50.50.60 373 413 1.2E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 SUPERFAMILY SSF51905 19 429 8.42E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 Gene3D G3DSA:3.30.9.10 341 372 1.2E-18 T 14-10-2018 VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 Pfam PF01266 FAD dependent oxidoreductase 20 412 3.7E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_23951 db3a5b0bd9e5ee043d1097a1fa6ff466 430 Gene3D G3DSA:3.50.50.60 20 233 6.8E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_11705 96f1120705ac3910fd83738e1e1651a9 117 Pfam PF00578 AhpC/TSA family 7 109 1.2E-31 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_11705 96f1120705ac3910fd83738e1e1651a9 117 Gene3D G3DSA:3.40.30.10 1 116 2.6E-36 T 14-10-2018 VEJY3_11705 96f1120705ac3910fd83738e1e1651a9 117 SUPERFAMILY SSF52833 1 111 5.78E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.1E-14 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.1E-14 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 3.1E-14 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.1E-14 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.1E-14 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21181 cdfb0800a5db3315e4a705b146160a32 498 Pfam PF00361 Proton-conducting membrane transporter 129 414 2.7E-59 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_21671 816a3f2ded43657293d6f968d424db8c 264 Gene3D G3DSA:3.40.50.620 10 264 4.8E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_21671 816a3f2ded43657293d6f968d424db8c 264 SUPERFAMILY SSF52402 15 219 1.88E-19 T 14-10-2018 VEJY3_21671 816a3f2ded43657293d6f968d424db8c 264 Pfam PF01012 Electron transfer flavoprotein domain 29 189 2.2E-11 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_16256 f544b1a46f356440a8980701fc9f90cc 160 Gene3D G3DSA:2.40.440.10 13 160 6.2E-18 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEJY3_16256 f544b1a46f356440a8980701fc9f90cc 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 2.3E-19 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEJY3_16256 f544b1a46f356440a8980701fc9f90cc 160 SUPERFAMILY SSF141523 24 158 3.14E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 Gene3D G3DSA:1.10.3930.10 68 148 1.1E-146 T 14-10-2018 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PIRSF PIRSF006356 1 407 5.0E-156 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 SUPERFAMILY SSF55909 3 407 1.54E-130 T 14-10-2018 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 Pfam PF02274 Amidinotransferase 18 404 4.3E-110 T 14-10-2018 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 44.987 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 Gene3D G3DSA:3.75.10.10 6 404 1.1E-146 T 14-10-2018 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_13605 1d7541da913a122a1a7d39fdf59dfc8a 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEJY3_19881 0d68594eebc08a2c20578b22fdfb628e 251 Pfam PF03746 LamB/YcsF family 9 246 9.4E-93 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VEJY3_19881 0d68594eebc08a2c20578b22fdfb628e 251 SUPERFAMILY SSF88713 7 249 5.41E-90 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEJY3_19881 0d68594eebc08a2c20578b22fdfb628e 251 Gene3D G3DSA:3.20.20.370 6 251 1.1E-96 T 14-10-2018 VEJY3_19881 0d68594eebc08a2c20578b22fdfb628e 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 42.804 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Gene3D G3DSA:3.30.300.150 573 698 4.8E-39 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 575 713 2.1E-47 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 SUPERFAMILY SSF48019 243 360 3.83E-32 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Gene3D G3DSA:3.40.50.300 13 177 9.7E-102 T 14-10-2018 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Gene3D G3DSA:1.10.8.60 8 240 9.7E-102 T 14-10-2018 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Gene3D G3DSA:1.20.272.10 242 361 3.2E-39 T 14-10-2018 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 499 573 1.4E-21 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.0E-44 T 14-10-2018 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 SUPERFAMILY SSF52540 32 222 9.16E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 7.9E-32 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VEJY3_11220 98044f83a9a20397cb2ec6efe574e167 716 SMART SM00382 37 179 1.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 Pfam PF00083 Sugar (and other) transporter 449 553 1.2E-23 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 Pfam PF00083 Sugar (and other) transporter 54 379 1.5E-72 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 PRINTS PR00171 Sugar transporter signature 61 71 1.5E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 PRINTS PR00171 Sugar transporter signature 456 477 1.5E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 PRINTS PR00171 Sugar transporter signature 479 491 1.5E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 PRINTS PR00171 Sugar transporter signature 310 320 1.5E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 45 388 3.1E-73 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 ProSitePatterns PS00216 Sugar transport proteins signature 1. 354 370 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 ProSitePatterns PS00216 Sugar transport proteins signature 1. 107 124 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_09185 4e3f648c0e44f9d9b54f5096516c7e2e 571 SUPERFAMILY SSF103473 44 552 6.15E-64 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 PIRSF PIRSF002134 1 118 2.5E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 SUPERFAMILY SSF46946 2 114 3.24E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.128 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01390 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:1.10.8.50 1 71 5.2E-28 T 14-10-2018 VEJY3_22936 6fae72c7f66fdc3323a8582ca064dbb9 351 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 6 337 3.6E-64 T 14-10-2018 IPR013399 CRISPR-associated protein Csy3 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 SMART SM00849 34 209 5.7E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Pfam PF00301 Rubredoxin 443 488 3.5E-18 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Pfam PF00258 Flavodoxin 256 388 2.6E-11 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 PRINTS PR00163 Rubredoxin signature 472 488 2.2E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 PRINTS PR00163 Rubredoxin signature 442 458 2.2E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 SUPERFAMILY SSF52218 251 396 8.55E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 PIRSF PIRSF005243 1 400 3.3E-172 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 SUPERFAMILY SSF57802 441 492 6.73E-17 T 14-10-2018 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Pfam PF00753 Metallo-beta-lactamase superfamily 34 178 5.1E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Gene3D G3DSA:2.20.28.10 441 493 7.6E-21 T 14-10-2018 VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 SUPERFAMILY SSF56281 8 285 1.22E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Gene3D G3DSA:3.60.15.10 1 247 1.9E-105 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_21046 eb8470c5fc644a8efbc124c95affb1d6 493 Gene3D G3DSA:3.40.50.360 253 395 6.4E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_18216 7900dcfbdfba3a2d950580e27ed5a776 171 Pfam PF01292 Prokaryotic cytochrome b561 6 167 4.5E-23 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VEJY3_18216 7900dcfbdfba3a2d950580e27ed5a776 171 SUPERFAMILY SSF81342 3 169 1.28E-33 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEJY3_18216 7900dcfbdfba3a2d950580e27ed5a776 171 Gene3D G3DSA:1.20.950.20 1 163 2.6E-7 T 14-10-2018 VEJY3_09150 20ae1cce4451983f13d8e0620e7ebdcd 1016 SUPERFAMILY SSF51445 545 913 6.07E-19 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09150 20ae1cce4451983f13d8e0620e7ebdcd 1016 Gene3D G3DSA:2.60.120.430 215 395 1.3E-11 T 14-10-2018 VEJY3_09150 20ae1cce4451983f13d8e0620e7ebdcd 1016 Gene3D G3DSA:3.20.20.80 399 921 1.2E-147 T 14-10-2018 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.2E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.2E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.2E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 8.2E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 SUPERFAMILY SSF64518 171 645 3.01E-27 T 14-10-2018 VEJY3_03590 b6968d4faca6448a29d0f08de53a15a9 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 599 645 1.3E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 Gene3D G3DSA:3.20.20.70 1 256 1.1E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 SMART SM01133 10 244 3.3E-79 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.9E-48 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.791 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 SUPERFAMILY SSF51569 6 245 6.38E-83 T 14-10-2018 VEJY3_12600 99840658c20b96c2453852602a06cb3b 258 PIRSF PIRSF001357 5 252 1.1E-76 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEJY3_12130 9af353933206fb70c02ed52c377b3940 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 3.3E-47 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VEJY3_12130 9af353933206fb70c02ed52c377b3940 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.618 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VEJY3_09025 74fb392cdc3fbb064d04406ca888e192 95 Gene3D G3DSA:3.30.70.100 1 90 4.8E-19 T 14-10-2018 VEJY3_09025 74fb392cdc3fbb064d04406ca888e192 95 SUPERFAMILY SSF54909 1 85 8.26E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_09025 74fb392cdc3fbb064d04406ca888e192 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 72 4.5E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Gene3D G3DSA:3.20.20.140 1 270 6.6E-90 T 14-10-2018 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 SUPERFAMILY SSF50249 976 1064 2.4E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 SUPERFAMILY SSF89550 5 263 1.86E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-32 T 14-10-2018 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Gene3D G3DSA:2.40.50.140 983 1072 4.0E-9 T 14-10-2018 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 5.8E-175 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 SMART SM00481 7 74 3.0E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.0E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12000 e4a17a545d6910e83e8fbeee5c0cef84 1159 Pfam PF02811 PHP domain 8 171 1.0E-41 T 14-10-2018 IPR004013 PHP domain GO:0003824 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Gene3D G3DSA:3.30.830.10 239 468 3.4E-71 T 14-10-2018 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 SUPERFAMILY SSF63411 4 226 6.67E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 SUPERFAMILY SSF63411 232 468 5.59E-78 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 SUPERFAMILY SSF63411 470 694 6.5E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Gene3D G3DSA:3.30.830.10 618 877 1.5E-108 T 14-10-2018 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Gene3D G3DSA:3.30.830.10 470 852 1.5E-108 T 14-10-2018 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 1.2E-8 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 3.7E-23 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 SUPERFAMILY SSF63411 703 908 2.1E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 1.0E-79 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Gene3D G3DSA:3.30.830.10 1 228 3.3E-86 T 14-10-2018 VEJY3_11365 d95163760ca7c5165944b5f10cdb01d4 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.1E-39 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.6E-58 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.3E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 SUPERFAMILY SSF54919 1 140 3.67E-61 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 SMART SM00562 3 140 3.2E-90 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 Gene3D G3DSA:3.30.70.141 1 141 1.0E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_02765 e5ba3c1a90dfcdba8ff3981ece40870a 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.19 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 14-10-2018 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06195 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 14-10-2018 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 174 398 6.0E-13 T 14-10-2018 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 Pfam PF04055 Radical SAM superfamily 23 187 2.7E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 Pfam PF13353 4Fe-4S single cluster domain 27 162 1.3E-4 T 14-10-2018 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 Gene3D G3DSA:3.20.20.70 14 384 1.3E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 SUPERFAMILY SSF102114 13 343 3.92E-44 T 14-10-2018 VEJY3_24091 b2821a8430da4c9362fdf7463f40a852 400 Pfam PF13186 Iron-sulfur cluster-binding domain 273 334 1.9E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 Pfam PF00106 short chain dehydrogenase 7 197 1.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 Gene3D G3DSA:3.40.50.720 3 269 1.2E-65 T 14-10-2018 VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 SUPERFAMILY SSF51735 1 258 2.33E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_06595 95218c4d2f03ed731b52c047acd4f8c1 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.0E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Gene3D G3DSA:3.30.450.20 28 131 1.5E-12 T 14-10-2018 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SMART SM00283 247 434 1.1E-13 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 277 435 1.3E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Pfam PF08447 PAS fold 166 251 2.2E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Pfam PF13426 PAS domain 34 132 8.7E-11 T 14-10-2018 IPR000014 PAS domain VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SMART SM00091 141 211 0.028 T 14-10-2018 IPR000014 PAS domain VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SMART SM00091 19 89 0.0093 T 14-10-2018 IPR000014 PAS domain VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Gene3D G3DSA:1.10.287.950 253 437 6.0E-41 T 14-10-2018 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SUPERFAMILY SSF58104 232 434 1.1E-49 T 14-10-2018 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SUPERFAMILY SSF55785 153 258 8.72E-23 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SUPERFAMILY SSF55785 34 128 1.74E-14 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SMART SM00086 216 258 0.0051 T 14-10-2018 IPR001610 PAC motif VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 SMART SM00086 94 136 490.0 T 14-10-2018 IPR001610 PAC motif VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 Gene3D G3DSA:3.30.450.20 132 252 5.9E-21 T 14-10-2018 VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 141 2.1E-7 T 14-10-2018 IPR000014 PAS domain VEJY3_20656 72fa03131ad3070da1ae500699a61f54 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 263 1.1E-16 T 14-10-2018 IPR000014 PAS domain VEJY3_22686 fb3b25bdb1bc1de7376db38e5beb8573 169 Gene3D G3DSA:3.30.420.10 1 150 5.4E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_22686 fb3b25bdb1bc1de7376db38e5beb8573 169 Pfam PF00665 Integrase core domain 3 117 7.3E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_22686 fb3b25bdb1bc1de7376db38e5beb8573 169 SUPERFAMILY SSF53098 2 157 1.07E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 Gene3D G3DSA:3.40.1550.10 43 230 2.2E-55 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 SUPERFAMILY SSF103039 4 230 1.78E-20 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 2.2E-17 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 SUPERFAMILY SSF101801 247 322 3.27E-14 T 14-10-2018 IPR036429 SpoA-like superfamily VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.9E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_11545 5a10ca0d9dd1f761206e809525ee13e6 348 PIRSF PIRSF002888 1 328 4.6E-92 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 SUPERFAMILY SSF46689 73 123 4.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 Gene3D G3DSA:1.10.10.60 13 72 5.2E-20 T 14-10-2018 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 Pfam PF06445 GyrI-like small molecule binding domain 148 309 2.9E-15 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 SMART SM00342 36 119 1.9E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 Gene3D G3DSA:1.10.10.60 73 133 4.2E-15 T 14-10-2018 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 SMART SM00871 147 309 2.4E-14 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 SUPERFAMILY SSF55136 148 310 1.01E-20 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 SUPERFAMILY SSF46689 19 70 3.05E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 Pfam PF12833 Helix-turn-helix domain 42 120 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 103 119 6.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 103 6.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_07930 570aa7dba37f0e75d8fd30bf2b10b57c 314 Gene3D G3DSA:3.20.80.10 148 312 6.8E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 SUPERFAMILY SSF55973 233 382 1.53E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Gene3D G3DSA:3.30.300.10 103 372 1.3E-179 T 14-10-2018 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Gene3D G3DSA:3.30.300.10 5 233 1.3E-179 T 14-10-2018 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Gene3D G3DSA:3.30.300.10 11 270 1.3E-179 T 14-10-2018 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.075 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 PIRSF PIRSF000497 1 381 5.7E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 SUPERFAMILY SSF55973 111 232 1.65E-51 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_13405 4903a9319e2b3caf1f00dc7b496fb795 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.8E-45 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEJY3_02065 80f2704931d099bc5bfe54ba9532e47e 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02065 80f2704931d099bc5bfe54ba9532e47e 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.512 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02065 80f2704931d099bc5bfe54ba9532e47e 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02065 80f2704931d099bc5bfe54ba9532e47e 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_02065 80f2704931d099bc5bfe54ba9532e47e 360 Pfam PF00953 Glycosyl transferase family 4 99 283 8.5E-38 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VEJY3_05770 473af572942f3d29405bd73fba682303 230 Gene3D G3DSA:3.30.2350.10 1 196 5.2E-48 T 14-10-2018 VEJY3_05770 473af572942f3d29405bd73fba682303 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_05770 473af572942f3d29405bd73fba682303 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 6.9E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_05770 473af572942f3d29405bd73fba682303 230 SUPERFAMILY SSF55120 2 198 6.56E-48 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_13045 45425813c68b5f3aadd5dc6e846b8829 204 SUPERFAMILY SSF52540 1 193 7.84E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13045 45425813c68b5f3aadd5dc6e846b8829 204 Gene3D G3DSA:3.40.50.300 1 204 1.5E-69 T 14-10-2018 VEJY3_13045 45425813c68b5f3aadd5dc6e846b8829 204 Pfam PF01121 Dephospho-CoA kinase 3 180 1.0E-71 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VEJY3_13045 45425813c68b5f3aadd5dc6e846b8829 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.019 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 SUPERFAMILY SSF56176 15 209 7.94E-57 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 Gene3D G3DSA:3.30.43.10 18 96 1.0E-29 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 Pfam PF08031 Berberine and berberine like 415 459 6.7E-17 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 Pfam PF01565 FAD binding domain 44 175 3.0E-30 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 Gene3D G3DSA:3.40.462.20 209 420 4.8E-121 T 14-10-2018 VEJY3_20506 f717cbefe654840c3291e125295a055d 461 Gene3D G3DSA:3.30.465.10 109 447 4.8E-121 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 452 1.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Gene3D G3DSA:3.40.190.10 137 244 4.1E-15 T 14-10-2018 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 SMART SM00388 387 456 3.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 SMART SM00387 498 611 5.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 SUPERFAMILY SSF55874 460 608 1.7E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Gene3D G3DSA:3.40.190.10 60 136 4.1E-15 T 14-10-2018 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 4.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 4.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 609 6.4E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 SUPERFAMILY SSF47384 380 452 1.29E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 SUPERFAMILY SSF53850 66 288 8.95E-16 T 14-10-2018 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Gene3D G3DSA:3.30.565.10 455 611 5.8E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Gene3D G3DSA:1.10.287.130 393 453 7.3E-17 T 14-10-2018 VEJY3_10465 80d92174ffe93a0a07ea455a11960832 611 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 62 295 7.8E-33 T 14-10-2018 VEJY3_07235 cb53d44d76071050ba4e80e389325742 202 SUPERFAMILY SSF54862 1 183 1.36E-47 T 14-10-2018 VEJY3_07235 cb53d44d76071050ba4e80e389325742 202 Gene3D G3DSA:3.30.70.20 5 181 9.4E-34 T 14-10-2018 VEJY3_07235 cb53d44d76071050ba4e80e389325742 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_07235 cb53d44d76071050ba4e80e389325742 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 7.9E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_07235 cb53d44d76071050ba4e80e389325742 202 Gene3D G3DSA:3.30.70.20 63 120 9.4E-34 T 14-10-2018 VEJY3_11420 8cecfac18cb609456fbae18d0de0e5bb 184 Gene3D G3DSA:3.40.30.10 20 184 1.6E-44 T 14-10-2018 VEJY3_11420 8cecfac18cb609456fbae18d0de0e5bb 184 SUPERFAMILY SSF52833 46 178 4.77E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_11420 8cecfac18cb609456fbae18d0de0e5bb 184 Pfam PF08534 Redoxin 41 164 5.3E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEJY3_11420 8cecfac18cb609456fbae18d0de0e5bb 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 Pfam PF12833 Helix-turn-helix domain 162 241 7.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 SMART SM00342 155 239 1.6E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 Gene3D G3DSA:1.10.10.60 188 242 1.2E-20 T 14-10-2018 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 SUPERFAMILY SSF46689 142 188 2.06E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 SUPERFAMILY SSF46689 192 241 3.32E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 Gene3D G3DSA:1.10.10.60 138 187 5.7E-11 T 14-10-2018 VEJY3_12540 b9dc00a39661f3d2b592977754676ca8 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 235 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_02630 d66011ca81a4e3815c65d70cc173b56e 557 Gene3D G3DSA:1.10.3720.10 286 549 3.1E-30 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02630 d66011ca81a4e3815c65d70cc173b56e 557 SUPERFAMILY SSF161098 284 538 2.09E-36 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02630 d66011ca81a4e3815c65d70cc173b56e 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 475 4.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SUPERFAMILY SSF81901 120 268 3.84E-16 T 14-10-2018 VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SUPERFAMILY SSF81901 31 108 9.42E-11 T 14-10-2018 VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SMART SM00671 167 201 180.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SMART SM00671 202 241 120.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SMART SM00671 59 95 0.15 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 SMART SM00671 131 166 150.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 Pfam PF08238 Sel1 repeat 60 94 0.0067 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 Pfam PF08238 Sel1 repeat 203 238 0.026 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 Pfam PF08238 Sel1 repeat 132 164 0.064 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 Gene3D G3DSA:1.25.40.10 115 319 1.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_20366 ef817e7c4bfcaa95cfc9f31cec6d9e4c 320 Gene3D G3DSA:1.25.40.10 23 114 1.2E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 SMART SM00357 3 67 9.2E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 Gene3D G3DSA:2.40.50.140 2 65 4.4E-30 T 14-10-2018 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 PRINTS PR00050 Cold shock protein signature 25 34 5.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 PRINTS PR00050 Cold shock protein signature 4 19 5.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 PRINTS PR00050 Cold shock protein signature 40 58 5.7E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 SUPERFAMILY SSF50249 1 66 1.33E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_23496 c981efecdea247885b9ff3e18e7074d9 67 PIRSF PIRSF002599 1 67 3.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 1.9E-204 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 Gene3D G3DSA:3.40.605.10 21 465 3.7E-179 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 Pfam PF00171 Aldehyde dehydrogenase family 19 469 1.9E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 SUPERFAMILY SSF53720 21 473 1.26E-161 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_08265 bf2a55feab52d13fe23a6665f0853b94 475 Gene3D G3DSA:3.40.309.10 255 442 3.7E-179 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_17881 31f0574406fbc9c17d5f8484d85ee4a3 258 Gene3D G3DSA:3.40.1080.10 2 251 7.7E-77 T 14-10-2018 VEJY3_17881 31f0574406fbc9c17d5f8484d85ee4a3 258 Pfam PF01144 Coenzyme A transferase 9 218 9.0E-43 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_17881 31f0574406fbc9c17d5f8484d85ee4a3 258 SUPERFAMILY SSF100950 4 246 1.47E-70 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_17881 31f0574406fbc9c17d5f8484d85ee4a3 258 SMART SM00882 9 218 2.3E-36 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 SMART SM00882 4 241 2.6E-53 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 PIRSF PIRSF000858 2 519 1.5E-204 T 14-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 Gene3D G3DSA:3.40.1080.10 2 265 9.2E-98 T 14-10-2018 VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 Gene3D G3DSA:3.40.1080.10 280 521 4.2E-102 T 14-10-2018 VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 SUPERFAMILY SSF100950 5 251 4.19E-83 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 SUPERFAMILY SSF100950 281 515 1.38E-70 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_19286 d29bd9c228adbc31aeb76c84fc90acb0 521 Pfam PF01144 Coenzyme A transferase 6 240 1.8E-27 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VEJY3_18276 d6ee8403f8a81a071aedf9c1f589f4f7 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 228 5.2E-70 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain VEJY3_18276 d6ee8403f8a81a071aedf9c1f589f4f7 418 Gene3D G3DSA:3.40.980.20 242 418 1.6E-61 T 14-10-2018 VEJY3_18276 d6ee8403f8a81a071aedf9c1f589f4f7 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 255 410 1.3E-38 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain VEJY3_18276 d6ee8403f8a81a071aedf9c1f589f4f7 418 Gene3D G3DSA:3.40.50.10840 2 235 5.0E-89 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily VEJY3_18276 d6ee8403f8a81a071aedf9c1f589f4f7 418 SUPERFAMILY SSF142764 3 417 8.11E-132 T 14-10-2018 VEJY3_07370 7858a04f06c5765cfd4fb3585b6361cc 475 Gene3D G3DSA:1.20.210.10 4 471 2.4E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_07370 7858a04f06c5765cfd4fb3585b6361cc 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_07370 7858a04f06c5765cfd4fb3585b6361cc 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.8E-114 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_07370 7858a04f06c5765cfd4fb3585b6361cc 475 SUPERFAMILY SSF81442 11 466 2.49E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 Gene3D G3DSA:3.40.50.2300 161 323 3.1E-65 T 14-10-2018 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 Gene3D G3DSA:3.40.50.2300 78 319 3.1E-65 T 14-10-2018 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 Gene3D G3DSA:1.10.260.40 1 60 2.9E-23 T 14-10-2018 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 SUPERFAMILY SSF47413 2 60 2.69E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 Pfam PF13377 Periplasmic binding protein-like domain 170 328 5.9E-31 T 14-10-2018 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 SMART SM00354 2 72 6.1E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_09130 e9f2ae35c40eb506812e41d40b249848 353 SUPERFAMILY SSF53822 60 325 6.52E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 539 1.6E-19 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 Gene3D G3DSA:3.90.780.10 370 578 2.7E-31 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 SUPERFAMILY SSF56300 11 326 1.92E-74 T 14-10-2018 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 Gene3D G3DSA:3.60.21.10 2 369 1.1E-87 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 SUPERFAMILY SSF55816 369 563 1.15E-33 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 252 2.2E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 PRINTS PR01607 Apyrase family signature 275 295 1.8E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 PRINTS PR01607 Apyrase family signature 10 28 1.8E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 PRINTS PR01607 Apyrase family signature 235 258 1.8E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_20006 9fb7fa0347c51a773e34d03542a32e1d 580 PRINTS PR01607 Apyrase family signature 216 233 1.8E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 Gene3D G3DSA:1.10.10.10 11 97 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 SUPERFAMILY SSF53850 97 294 9.77E-26 T 14-10-2018 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 Pfam PF03466 LysR substrate binding domain 96 294 9.8E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 Gene3D G3DSA:3.40.190.10 167 265 2.8E-37 T 14-10-2018 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 Gene3D G3DSA:3.40.190.10 107 289 2.8E-37 T 14-10-2018 VEJY3_23926 eaf861cb8141e50916f742a4d11047af 295 SUPERFAMILY SSF46785 9 88 3.17E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23076 f4a266287bb7bcc2fb29e2d1c1e82075 161 SUPERFAMILY SSF54637 6 150 9.12E-41 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_23076 f4a266287bb7bcc2fb29e2d1c1e82075 161 Pfam PF03061 Thioesterase superfamily 22 97 5.4E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_23076 f4a266287bb7bcc2fb29e2d1c1e82075 161 Gene3D G3DSA:3.10.129.10 2 161 5.5E-43 T 14-10-2018 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 SUPERFAMILY SSF52540 144 335 2.66E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Gene3D G3DSA:1.10.8.60 277 344 1.1E-9 T 14-10-2018 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 SUPERFAMILY SSF52172 5 186 1.17E-37 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Pfam PF02954 Bacterial regulatory protein, Fis family 359 398 6.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Gene3D G3DSA:3.40.50.2300 4 121 1.9E-33 T 14-10-2018 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Pfam PF00072 Response regulator receiver domain 5 114 3.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 SUPERFAMILY SSF46689 349 401 2.69E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Gene3D G3DSA:3.40.50.300 143 276 3.7E-9 T 14-10-2018 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 Gene3D G3DSA:1.10.10.60 345 403 1.6E-8 T 14-10-2018 VEJY3_24321 a4213b691a5f92ce431c4a7a2de86a2d 408 SMART SM00448 3 114 2.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_20151 e35fe68b241b07eb0043019f47f5283a 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 44 306 6.8E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEJY3_20151 e35fe68b241b07eb0043019f47f5283a 317 Gene3D G3DSA:3.60.10.10 2 310 9.6E-36 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_20151 e35fe68b241b07eb0043019f47f5283a 317 SUPERFAMILY SSF56219 5 314 2.09E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_11355 4c27d26493e0ceda5f3bc57781fbfbf6 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.573 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 VEJY3_11355 4c27d26493e0ceda5f3bc57781fbfbf6 176 Gene3D G3DSA:3.30.1370.110 49 175 2.7E-27 T 14-10-2018 VEJY3_11355 4c27d26493e0ceda5f3bc57781fbfbf6 176 SUPERFAMILY SSF160443 95 171 9.15E-11 T 14-10-2018 IPR036063 Smr domain superfamily VEJY3_11355 4c27d26493e0ceda5f3bc57781fbfbf6 176 Pfam PF01713 Smr domain 97 171 4.4E-17 T 14-10-2018 IPR002625 Smr domain VEJY3_11355 4c27d26493e0ceda5f3bc57781fbfbf6 176 SMART SM00463 94 172 5.6E-15 T 14-10-2018 IPR002625 Smr domain VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Gene3D G3DSA:3.40.50.300 638 940 3.4E-120 T 14-10-2018 VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 SMART SM00843 958 1023 5.3E-38 T 14-10-2018 IPR018541 FtsK gamma domain VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Pfam PF09397 Ftsk gamma domain 960 1020 1.1E-25 T 14-10-2018 IPR018541 FtsK gamma domain VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Gene3D G3DSA:1.10.10.10 962 1025 4.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 SUPERFAMILY SSF46785 958 1023 4.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Pfam PF01580 FtsK/SpoIIIE family 641 854 2.4E-70 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 SUPERFAMILY SSF52540 615 927 3.19E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 2.0E-41 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region VEJY3_05415 6ee511d0b473ed961c5613cd06456d88 1026 Gene3D G3DSA:3.30.980.40 533 637 6.0E-33 T 14-10-2018 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Gene3D G3DSA:3.40.50.150 2 308 9.3E-99 T 14-10-2018 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.0E-28 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Gene3D G3DSA:2.30.130.90 309 478 4.5E-67 T 14-10-2018 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 473 3.4E-9 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 65.719 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 SUPERFAMILY SSF53335 7 308 2.19E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_07650 1647f3cd0624e394932eb3f73b74778c 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 112 306 3.4E-49 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VEJY3_17901 8366c5497caeaf4644f1525f9f54f4ae 96 PIRSF PIRSF001486 1 94 1.4E-45 T 14-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 VEJY3_17901 8366c5497caeaf4644f1525f9f54f4ae 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.6E-40 T 14-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 VEJY3_17901 8366c5497caeaf4644f1525f9f54f4ae 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 3.0E-18 T 14-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 VEJY3_17901 8366c5497caeaf4644f1525f9f54f4ae 96 SUPERFAMILY SSF54909 1 95 1.29E-37 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_17901 8366c5497caeaf4644f1525f9f54f4ae 96 Gene3D G3DSA:3.30.70.1060 1 94 1.2E-36 T 14-10-2018 VEJY3_05490 165297fe304c4b059af29a730b2443c0 418 Gene3D G3DSA:3.40.50.150 149 418 1.2E-101 T 14-10-2018 VEJY3_05490 165297fe304c4b059af29a730b2443c0 418 PIRSF PIRSF003085 31 418 2.7E-120 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VEJY3_05490 165297fe304c4b059af29a730b2443c0 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 3.4E-81 T 14-10-2018 VEJY3_05490 165297fe304c4b059af29a730b2443c0 418 SUPERFAMILY SSF53335 21 371 2.98E-90 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 SUPERFAMILY SSF51905 1 338 3.02E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.3E-18 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.3E-18 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.3E-18 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.3E-18 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 SUPERFAMILY SSF52821 458 563 5.37E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Gene3D G3DSA:3.50.50.60 3 361 2.3E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 SMART SM00450 473 567 3.6E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Gene3D G3DSA:3.40.250.10 471 565 3.2E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 313 2.9E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Gene3D G3DSA:3.50.50.60 115 461 2.3E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 9.2E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 SUPERFAMILY SSF55424 344 467 4.12E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 Pfam PF00581 Rhodanese-like domain 483 563 2.5E-9 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.9E-23 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.9E-23 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.9E-23 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.9E-23 T 14-10-2018 VEJY3_19656 1280b8de0c5599002f3d44ca002de81b 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 3.9E-23 T 14-10-2018 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 PIRSF PIRSF006429 12 513 1.6E-142 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 Pfam PF01645 Conserved region in glutamate synthase 175 480 2.7E-88 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 Gene3D G3DSA:3.20.20.70 175 512 3.7E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 SMART SM00704 47 82 2.8E-7 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 SMART SM00704 9 46 6.1E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 Gene3D G3DSA:3.40.5.90 1 79 1.6E-32 T 14-10-2018 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 PIRSF PIRSF500061 5 515 1.6E-150 T 14-10-2018 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 Pfam PF09360 Iron-binding zinc finger CDGSH type 54 77 1.1E-8 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 Pfam PF09360 Iron-binding zinc finger CDGSH type 16 40 2.0E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEJY3_19226 d3b44a8acf8ea4198f5a73fb8d84736e 515 SUPERFAMILY SSF51395 127 504 4.64E-93 T 14-10-2018 VEJY3_08740 628cf6292bc6d05ed00f456d7468a5bd 393 Gene3D G3DSA:3.40.50.2000 177 376 1.1E-19 T 14-10-2018 VEJY3_08740 628cf6292bc6d05ed00f456d7468a5bd 393 SUPERFAMILY SSF53756 36 380 1.6E-27 T 14-10-2018 VEJY3_08740 628cf6292bc6d05ed00f456d7468a5bd 393 Pfam PF00534 Glycosyl transferases group 1 203 360 1.9E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_08740 628cf6292bc6d05ed00f456d7468a5bd 393 Gene3D G3DSA:3.40.50.2000 197 367 1.1E-19 T 14-10-2018 VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 Pfam PF01476 LysM domain 37 79 3.9E-11 T 14-10-2018 IPR018392 LysM domain VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 SUPERFAMILY SSF51261 36 294 6.8E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 SMART SM00257 36 80 4.4E-11 T 14-10-2018 IPR018392 LysM domain VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 Pfam PF01551 Peptidase family M23 196 290 3.5E-31 T 14-10-2018 IPR016047 Peptidase M23 VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 Gene3D G3DSA:2.70.70.10 130 295 4.2E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_13180 a98529dded1d737f7ca158dfe80379c8 295 Gene3D G3DSA:3.10.350.10 23 88 1.7E-11 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_13330 c9db8096307e2928579730fe582533d4 392 Gene3D G3DSA:3.30.9.50 81 270 4.9E-96 T 14-10-2018 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.2E-10 T 14-10-2018 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.2E-10 T 14-10-2018 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.2E-10 T 14-10-2018 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.2E-10 T 14-10-2018 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 Pfam PF01494 FAD binding domain 4 337 5.0E-22 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VEJY3_13330 c9db8096307e2928579730fe582533d4 392 SUPERFAMILY SSF51905 3 382 5.1E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_13330 c9db8096307e2928579730fe582533d4 392 Gene3D G3DSA:3.50.50.60 5 336 4.9E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 Gene3D G3DSA:3.30.379.10 132 258 1.4E-21 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 SUPERFAMILY SSF51445 260 552 5.05E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 2.0E-41 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 Gene3D G3DSA:3.20.20.80 259 554 5.9E-114 T 14-10-2018 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 553 3.7E-101 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 SUPERFAMILY SSF55545 128 259 1.79E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEJY3_12850 2f723c7a33905caf211488266c32ac6c 554 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 1.2E-16 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 Pfam PF08402 TOBE domain 282 354 1.3E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 Gene3D G3DSA:2.40.50.940 222 355 1.6E-34 T 14-10-2018 VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 Gene3D G3DSA:2.40.50.140 289 346 1.6E-34 T 14-10-2018 VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 SMART SM00382 28 211 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 SUPERFAMILY SSF52540 4 242 3.02E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 Gene3D G3DSA:3.40.50.300 3 221 4.4E-65 T 14-10-2018 VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 SUPERFAMILY SSF50331 236 358 1.58E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_09250 33ee528bd2507a6d5b76ee61f944d5b3 363 Pfam PF00005 ABC transporter 20 161 3.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02005 29b91ec0fad9fddc31ffb6957b5a41ff 160 PIRSF PIRSF005276 3 160 6.1E-63 T 14-10-2018 IPR007481 Stringent starvation protein B VEJY3_02005 29b91ec0fad9fddc31ffb6957b5a41ff 160 Pfam PF04386 Stringent starvation protein B 9 160 1.9E-42 T 14-10-2018 IPR007481 Stringent starvation protein B VEJY3_02005 29b91ec0fad9fddc31ffb6957b5a41ff 160 Gene3D G3DSA:2.30.30.220 3 131 2.1E-53 T 14-10-2018 IPR036760 SspB-like superfamily VEJY3_02005 29b91ec0fad9fddc31ffb6957b5a41ff 160 SUPERFAMILY SSF101738 4 118 9.68E-50 T 14-10-2018 IPR036760 SspB-like superfamily VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1488 1589 8.1E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1184 1285 1.3E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 2095 2199 1.5E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 879 980 8.6E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1790 1893 2.7E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 2435 2536 1.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1590 1684 5.6E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1894 1989 3.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 2200 2294 4.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 674 770 6.0E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 1286 1379 1.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 981 1074 5.5E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 1189 1283 1.32E-25 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 2103 2198 3.77E-24 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 1798 1893 2.51E-24 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 885 979 1.53E-25 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 2206 2299 2.98E-5 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SUPERFAMILY SSF49313 1494 1588 2.47E-25 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 1916 1996 0.24 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 698 777 0.22 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 1002 1081 0.092 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 2221 2301 0.031 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 1306 1386 0.17 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00112 1611 1691 0.17 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1286 1385 0.067 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 2105 2200 2.1E-32 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 677 776 0.0035 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1495 1590 1.2E-34 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 2201 2300 0.098 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 886 981 4.1E-35 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 982 1080 0.032 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1190 1285 1.5E-34 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1591 1690 0.034 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1800 1895 6.4E-34 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 SMART SM00736 1896 1995 0.078 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 2636 2730 3.2E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Gene3D G3DSA:2.60.40.10 2537 2635 1.4E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Pfam PF05345 Putative Ig domain 2140 2181 6.7E-10 T 14-10-2018 IPR008009 Putative Ig VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Pfam PF05345 Putative Ig domain 1225 1266 3.6E-10 T 14-10-2018 IPR008009 Putative Ig VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Pfam PF05345 Putative Ig domain 1530 1572 7.3E-10 T 14-10-2018 IPR008009 Putative Ig VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Pfam PF05345 Putative Ig domain 921 962 3.2E-10 T 14-10-2018 IPR008009 Putative Ig VEJY3_18191 03d4205b9a8f458a31b99226a1f6e10e 3043 Pfam PF05345 Putative Ig domain 1835 1877 1.1E-9 T 14-10-2018 IPR008009 Putative Ig VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 Gene3D G3DSA:3.30.70.100 757 850 1.8E-22 T 14-10-2018 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 SUPERFAMILY SSF82861 604 687 4.97E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 Pfam PF00924 Mechanosensitive ion channel 646 845 1.1E-56 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 SUPERFAMILY SSF82689 757 856 7.72E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 718 752 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 255 585 1.8E-41 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 SUPERFAMILY SSF50182 689 754 5.23E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_22646 316bf7bb80d2736f1d22b5ac3faf515d 858 Gene3D G3DSA:2.30.30.60 704 753 1.5E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Gene3D G3DSA:3.40.50.300 215 433 1.5E-52 T 14-10-2018 VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 SMART SM00487 25 223 8.3E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 SUPERFAMILY SSF52540 74 361 2.52E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Gene3D G3DSA:3.30.70.330 480 549 9.6E-10 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 SMART SM00490 259 340 1.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 551 41.749 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Pfam PF00270 DEAD/DEAH box helicase 30 196 2.4E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Gene3D G3DSA:3.40.50.300 1 211 4.3E-74 T 14-10-2018 VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Pfam PF03880 DbpA RNA binding domain 479 546 4.3E-16 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VEJY3_21136 337418531ce41d6dbf21f468deb4c53a 639 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 SUPERFAMILY SSF50182 180 247 4.25E-18 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 Gene3D G3DSA:2.30.30.60 196 248 2.9E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 SUPERFAMILY SSF82861 97 179 7.72E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 SUPERFAMILY SSF82689 252 351 7.98E-19 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 Pfam PF00924 Mechanosensitive ion channel 138 342 3.9E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_23481 76b4a2017185c976e3e81271041d3762 367 Gene3D G3DSA:3.30.70.100 249 346 1.3E-14 T 14-10-2018 VEJY3_07690 db522e684fed3f084d76f9e594c0262e 342 SUPERFAMILY SSF53850 29 259 8.77E-49 T 14-10-2018 VEJY3_07690 db522e684fed3f084d76f9e594c0262e 342 SMART SM00062 38 267 2.7E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_07690 db522e684fed3f084d76f9e594c0262e 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.7E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_07690 db522e684fed3f084d76f9e594c0262e 342 Gene3D G3DSA:3.40.190.10 28 257 9.0E-51 T 14-10-2018 VEJY3_07690 db522e684fed3f084d76f9e594c0262e 342 Gene3D G3DSA:3.40.190.10 130 225 9.0E-51 T 14-10-2018 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 Gene3D G3DSA:3.40.50.10940 1 175 9.5E-79 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 Pfam PF02610 L-arabinose isomerase 5 358 2.7E-169 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 PIRSF PIRSF001478 1 498 1.4E-234 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 1.4E-45 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-126 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 475 62.056 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 SUPERFAMILY SSF50443 329 496 2.62E-66 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VEJY3_24146 a46420521076815099ff4ec74c29ecc8 500 SUPERFAMILY SSF53743 1 327 2.3E-117 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 SMART SM00487 28 234 4.5E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.4E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 SUPERFAMILY SSF52540 85 363 1.01E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 SMART SM00490 270 351 1.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.864 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 Gene3D G3DSA:3.40.50.300 2 222 2.9E-72 T 14-10-2018 VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 Gene3D G3DSA:3.40.50.300 229 408 1.9E-46 T 14-10-2018 VEJY3_15130 69227bbe28283418dfc1ab06efa6a7fd 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.1E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_16761 3341a5c62237e65b58362fc9744e407f 299 Pfam PF00892 EamA-like transporter family 9 138 1.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_16761 3341a5c62237e65b58362fc9744e407f 299 SUPERFAMILY SSF103481 42 142 9.55E-15 T 14-10-2018 VEJY3_16761 3341a5c62237e65b58362fc9744e407f 299 SUPERFAMILY SSF103481 181 279 2.22E-10 T 14-10-2018 VEJY3_07505 2edf95696059115b20079c467f34f56b 88 SUPERFAMILY SSF47413 20 64 3.94E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_07505 2edf95696059115b20079c467f34f56b 88 Gene3D G3DSA:1.10.260.40 4 65 9.1E-7 T 14-10-2018 VEJY3_07505 2edf95696059115b20079c467f34f56b 88 Pfam PF01381 Helix-turn-helix 15 60 3.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 SUPERFAMILY SSF46689 342 460 2.73E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 SUPERFAMILY SSF52540 134 370 7.89E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Gene3D G3DSA:1.10.8.60 301 379 2.8E-30 T 14-10-2018 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 SUPERFAMILY SSF52172 3 173 4.84E-40 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 1.5E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 SMART SM00382 149 296 9.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 SMART SM00448 4 115 5.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Gene3D G3DSA:1.10.10.60 400 466 4.0E-9 T 14-10-2018 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Gene3D G3DSA:3.40.50.2300 1 119 8.9E-34 T 14-10-2018 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Gene3D G3DSA:3.40.50.300 120 300 3.2E-65 T 14-10-2018 VEJY3_11590 c3cbf80b1ee26579b5a3fd9190bce9d6 469 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 Gene3D G3DSA:3.90.180.10 7 294 3.1E-116 T 14-10-2018 VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 SUPERFAMILY SSF50129 13 149 1.02E-29 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 SMART SM00829 13 310 4.2E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 95 6.8E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 Gene3D G3DSA:3.40.50.720 123 248 3.1E-116 T 14-10-2018 VEJY3_09035 f99a8688e4a12e2e5f9eb31fac64d058 313 SUPERFAMILY SSF51735 115 264 4.9E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_06130 a76f6939a9835e31a0f23fd6cd52fd8a 153 Pfam PF04191 Phospholipid methyltransferase 43 142 1.4E-11 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VEJY3_06130 a76f6939a9835e31a0f23fd6cd52fd8a 153 Gene3D G3DSA:1.20.120.1630 4 153 9.4E-24 T 14-10-2018 VEJY3_06130 a76f6939a9835e31a0f23fd6cd52fd8a 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 9.0E-17 T 14-10-2018 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 9.2E-53 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 Pfam PF02056 Family 4 glycosyl hydrolase 7 185 1.7E-60 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 Gene3D G3DSA:3.90.110.10 168 445 9.0E-99 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 Gene3D G3DSA:3.40.50.720 2 167 2.9E-56 T 14-10-2018 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 418 2.6E-53 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 SUPERFAMILY SSF51735 4 165 1.01E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17016 6f71506146f9f55f2db6a2a42f3c4f27 445 SUPERFAMILY SSF56327 169 444 2.02E-86 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 Gene3D G3DSA:3.40.50.720 2 130 1.3E-23 T 14-10-2018 VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 PIRSF PIRSF026760 6 339 6.9E-94 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 SUPERFAMILY SSF52540 4 334 1.86E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 140 331 1.1E-69 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 Gene3D G3DSA:3.40.50.300 131 337 1.9E-73 T 14-10-2018 VEJY3_18486 984af969bf6d92ddc6cecac43971a58e 340 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 43 128 1.2E-24 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VEJY3_00995 81f92f6768cc08d9e9c3bd3e8afbcf35 354 Gene3D G3DSA:3.40.50.720 2 325 5.6E-139 T 14-10-2018 VEJY3_00995 81f92f6768cc08d9e9c3bd3e8afbcf35 354 Gene3D G3DSA:3.90.25.10 201 333 5.6E-139 T 14-10-2018 VEJY3_00995 81f92f6768cc08d9e9c3bd3e8afbcf35 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 3.1E-160 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VEJY3_00995 81f92f6768cc08d9e9c3bd3e8afbcf35 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.0E-98 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_00995 81f92f6768cc08d9e9c3bd3e8afbcf35 354 SUPERFAMILY SSF51735 1 337 7.88E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_24381 f37d3cc709ba19466a7377eb8eac9e7d 405 Gene3D G3DSA:1.10.1660.30 36 102 6.7E-6 T 14-10-2018 VEJY3_24381 f37d3cc709ba19466a7377eb8eac9e7d 405 Pfam PF13614 AAA domain 110 295 2.7E-21 T 14-10-2018 IPR025669 AAA domain VEJY3_24381 f37d3cc709ba19466a7377eb8eac9e7d 405 SUPERFAMILY SSF52540 108 367 9.36E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24381 f37d3cc709ba19466a7377eb8eac9e7d 405 Gene3D G3DSA:3.40.50.300 107 397 2.3E-55 T 14-10-2018 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 PIRSF PIRSF039144 1 112 5.8E-59 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 SMART SM00938 4 105 7.4E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 PRINTS PR00340 P-II protein signature 83 103 3.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 PRINTS PR00340 P-II protein signature 52 75 3.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 PRINTS PR00340 P-II protein signature 23 41 3.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 PRINTS PR00340 P-II protein signature 2 17 3.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 SUPERFAMILY SSF54913 1 112 2.03E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 Gene3D G3DSA:3.30.70.120 1 112 7.4E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEJY3_11980 2fe333794e8b50b4db0d1c89d7c613f0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.3E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_20571 7184f568e0648403c19618b55766590c 200 SUPERFAMILY SSF81452 7 198 9.03E-59 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20571 7184f568e0648403c19618b55766590c 200 Pfam PF00510 Cytochrome c oxidase subunit III 17 198 6.9E-17 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_20571 7184f568e0648403c19618b55766590c 200 Gene3D G3DSA:1.20.120.80 15 200 7.2E-57 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_14405 982f5478fc0e8645d6c6bacbb9f011fd 295 SUPERFAMILY SSF103481 36 140 1.31E-12 T 14-10-2018 VEJY3_14405 982f5478fc0e8645d6c6bacbb9f011fd 295 Pfam PF00892 EamA-like transporter family 156 293 3.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_14405 982f5478fc0e8645d6c6bacbb9f011fd 295 Pfam PF00892 EamA-like transporter family 4 135 7.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_14405 982f5478fc0e8645d6c6bacbb9f011fd 295 SUPERFAMILY SSF103481 199 293 1.02E-10 T 14-10-2018 VEJY3_20671 719ebb95aacc093cbbbb97bf0f9966ca 218 Gene3D G3DSA:3.40.30.10 1 211 1.5E-63 T 14-10-2018 VEJY3_20671 719ebb95aacc093cbbbb97bf0f9966ca 218 SUPERFAMILY SSF52833 4 214 2.47E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_20671 719ebb95aacc093cbbbb97bf0f9966ca 218 Pfam PF01323 DSBA-like thioredoxin domain 6 208 5.4E-30 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEJY3_14845 dff07ced466993554378a0b328abf34c 227 Gene3D G3DSA:3.90.1490.10 146 225 2.2E-7 T 14-10-2018 VEJY3_14845 dff07ced466993554378a0b328abf34c 227 SUPERFAMILY SSF52402 5 221 3.7E-55 T 14-10-2018 VEJY3_14845 dff07ced466993554378a0b328abf34c 227 Gene3D G3DSA:3.40.50.620 2 145 2.0E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_14845 dff07ced466993554378a0b328abf34c 227 Pfam PF01902 Diphthamide synthase 6 215 1.5E-22 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 SUPERFAMILY SSF64288 56 230 9.26E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 Gene3D G3DSA:1.10.10.10 1 69 5.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 SMART SM00866 91 228 3.9E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 Gene3D G3DSA:3.40.1410.10 89 224 6.9E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 Pfam PF07702 UTRA domain 92 228 5.6E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 SMART SM00345 9 68 9.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06165 98c1a3b4bca7cf5a926243bab8fdcfda 235 SUPERFAMILY SSF46785 3 71 4.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 SUPERFAMILY SSF56059 123 313 3.12E-59 T 14-10-2018 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.5E-48 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.7E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.802 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Gene3D G3DSA:3.40.50.20 1 129 9.1E-53 T 14-10-2018 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 SUPERFAMILY SSF52440 2 122 9.49E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_13430 eb4cb8f4fce6d70f9421ba4d5bd63333 316 Gene3D G3DSA:3.30.470.20 197 300 1.9E-40 T 14-10-2018 VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 Gene3D G3DSA:3.30.1340.10 1 85 1.0E-32 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 SUPERFAMILY SSF55594 1 82 2.09E-26 T 14-10-2018 IPR035895 HPr-like superfamily VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.8E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_03615 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 SUPERFAMILY SSF51735 106 273 2.18E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 Gene3D G3DSA:3.40.50.10860 8 258 1.3E-83 T 14-10-2018 VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.114 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 5.1E-23 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 Gene3D G3DSA:3.40.50.720 119 239 1.3E-83 T 14-10-2018 VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 3.3E-14 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VEJY3_15275 0f2d36bc8bfddffcd4e2caafdeab71f2 277 SUPERFAMILY SSF53223 6 105 1.96E-31 T 14-10-2018 VEJY3_24131 82094a05e628ae0b881f9b895e8d0b5f 332 Gene3D G3DSA:3.40.50.2300 33 314 2.4E-126 T 14-10-2018 VEJY3_24131 82094a05e628ae0b881f9b895e8d0b5f 332 Gene3D G3DSA:3.40.50.2300 138 323 2.4E-126 T 14-10-2018 VEJY3_24131 82094a05e628ae0b881f9b895e8d0b5f 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 33 325 3.6E-73 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEJY3_24131 82094a05e628ae0b881f9b895e8d0b5f 332 PIRSF PIRSF002816 1 332 1.9E-149 T 14-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 VEJY3_24131 82094a05e628ae0b881f9b895e8d0b5f 332 SUPERFAMILY SSF53822 32 330 1.16E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_19516 223fd3bbbda3bd7c4be2937288331de3 262 SUPERFAMILY SSF53474 9 247 7.47E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_19516 223fd3bbbda3bd7c4be2937288331de3 262 Gene3D G3DSA:3.40.50.1820 6 237 1.2E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_19516 223fd3bbbda3bd7c4be2937288331de3 262 Pfam PF01764 Lipase (class 3) 60 204 1.7E-27 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 Gene3D G3DSA:1.20.200.10 153 420 3.2E-113 T 14-10-2018 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 SUPERFAMILY SSF48557 13 467 1.91E-145 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 7.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 7.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 7.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 7.0E-26 T 14-10-2018 IPR000362 Fumarate lyase family VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.0E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 Gene3D G3DSA:1.10.40.30 421 470 1.2E-28 T 14-10-2018 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 Pfam PF00206 Lyase 23 355 7.4E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VEJY3_14555 648f53dcef01fb53962ebcced61c54c5 483 Gene3D G3DSA:1.10.275.10 16 152 2.8E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VEJY3_05825 21f4d2cd8e277fd96bf13b3ee807cac6 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.1E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VEJY3_09450 df19cd9d32f79284aaa9de8d76f644d8 66 Pfam PF13377 Periplasmic binding protein-like domain 2 63 1.4E-6 T 14-10-2018 VEJY3_09450 df19cd9d32f79284aaa9de8d76f644d8 66 SUPERFAMILY SSF53822 2 64 2.33E-11 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_09450 df19cd9d32f79284aaa9de8d76f644d8 66 Gene3D G3DSA:3.40.50.2300 1 66 7.7E-9 T 14-10-2018 VEJY3_06895 477cabee8f5d8fd68e7452117da357c7 213 SUPERFAMILY SSF52540 5 197 1.35E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06895 477cabee8f5d8fd68e7452117da357c7 213 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 46.636 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 VEJY3_06895 477cabee8f5d8fd68e7452117da357c7 213 PIRSF PIRSF005624 1 211 9.9E-47 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 VEJY3_06895 477cabee8f5d8fd68e7452117da357c7 213 Gene3D G3DSA:3.40.50.300 5 202 1.8E-48 T 14-10-2018 VEJY3_06895 477cabee8f5d8fd68e7452117da357c7 213 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 9.8E-38 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 Gene3D G3DSA:1.10.10.10 5 83 4.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 Pfam PF09339 IclR helix-turn-helix domain 15 64 3.6E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 SMART SM00346 12 102 6.2E-27 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 Pfam PF01614 Bacterial transcriptional regulator 135 257 1.3E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 Gene3D G3DSA:3.30.450.40 87 258 3.8E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 SUPERFAMILY SSF46785 12 83 1.52E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06815 270b93de2216a0ae6fb39d3ae9f987bf 273 SUPERFAMILY SSF55781 85 257 1.53E-23 T 14-10-2018 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.816 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 4.7E-31 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 SMART SM00475 3 254 6.6E-71 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 SMART SM00279 167 202 4.8E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 Gene3D G3DSA:1.10.150.20 167 255 1.0E-22 T 14-10-2018 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 SUPERFAMILY SSF88723 4 164 1.81E-39 T 14-10-2018 IPR029060 PIN-like domain superfamily VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 2.6E-24 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 SUPERFAMILY SSF47807 164 258 1.94E-21 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VEJY3_03210 4571b08b2a06786c9c257599ece5883f 260 Gene3D G3DSA:3.40.50.1010 1 166 3.3E-52 T 14-10-2018 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Gene3D G3DSA:1.10.730.10 455 577 1.9E-36 T 14-10-2018 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 SUPERFAMILY SSF52374 112 454 7.95E-95 T 14-10-2018 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.172 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.0E-37 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 SUPERFAMILY SSF47323 455 577 3.4E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Gene3D G3DSA:3.40.50.620 108 454 5.8E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 SMART SM00836 461 577 1.5E-42 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 SMART SM01016 5 87 2.0E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 SUPERFAMILY SSF55190 2 96 3.66E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.1E-162 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_03915 2f2aedb07e720c226a0246a4e3f76a67 577 Gene3D G3DSA:3.30.1360.70 1 106 1.7E-33 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VEJY3_07955 8d0760986ecdc6663e3a9030f9fad970 471 SUPERFAMILY SSF56954 9 446 1.44E-67 T 14-10-2018 VEJY3_07955 8d0760986ecdc6663e3a9030f9fad970 471 Pfam PF02321 Outer membrane efflux protein 28 242 7.8E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_07955 8d0760986ecdc6663e3a9030f9fad970 471 Pfam PF02321 Outer membrane efflux protein 268 446 7.1E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_07955 8d0760986ecdc6663e3a9030f9fad970 471 Gene3D G3DSA:1.20.1600.10 22 456 3.4E-65 T 14-10-2018 VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 Gene3D G3DSA:2.30.30.240 101 182 3.1E-31 T 14-10-2018 VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 SUPERFAMILY SSF50346 106 182 4.32E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 SUPERFAMILY SSF50447 13 100 1.17E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.703 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 Pfam PF01782 RimM N-terminal domain 15 95 8.1E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 Gene3D G3DSA:2.40.30.60 4 100 9.4E-33 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VEJY3_13070 844e6ff9403d720520cb25cb8281c1cb 182 Pfam PF05239 PRC-barrel domain 103 168 1.3E-11 T 14-10-2018 IPR027275 PRC-barrel domain VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 Gene3D G3DSA:1.10.10.10 4 91 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 SUPERFAMILY SSF46785 5 112 4.22E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 Pfam PF03466 LysR substrate binding domain 91 294 2.7E-46 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 SUPERFAMILY SSF53850 92 296 4.59E-41 T 14-10-2018 VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 Gene3D G3DSA:3.40.190.290 94 297 2.4E-34 T 14-10-2018 VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12360 0ca2d8d003944b941d14f7bc948be227 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_03995 7c0786c6f55693d56aff9bd56eb7e7b8 323 Gene3D G3DSA:1.10.8.350 35 199 2.8E-92 T 14-10-2018 VEJY3_03995 7c0786c6f55693d56aff9bd56eb7e7b8 323 SUPERFAMILY SSF53955 10 322 1.41E-100 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_03995 7c0786c6f55693d56aff9bd56eb7e7b8 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 1.5E-111 T 14-10-2018 IPR011970 Lytic murein transglycosylase VEJY3_03995 7c0786c6f55693d56aff9bd56eb7e7b8 323 Pfam PF13406 Transglycosylase SLT domain 24 319 2.1E-110 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 VEJY3_03995 7c0786c6f55693d56aff9bd56eb7e7b8 323 Gene3D G3DSA:1.10.530.10 66 318 2.8E-92 T 14-10-2018 VEJY3_16806 8b8ac93501c9ae24335494e406d12699 379 Gene3D G3DSA:1.20.1250.20 1 365 5.2E-24 T 14-10-2018 VEJY3_16806 8b8ac93501c9ae24335494e406d12699 379 Pfam PF07690 Major Facilitator Superfamily 14 313 3.0E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_16806 8b8ac93501c9ae24335494e406d12699 379 SUPERFAMILY SSF103473 4 365 6.28E-31 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_17096 336d8edc1c83a874d6670803b96259ea 190 Pfam PF03358 NADPH-dependent FMN reductase 5 148 4.2E-33 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEJY3_17096 336d8edc1c83a874d6670803b96259ea 190 SUPERFAMILY SSF52218 5 178 1.0E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_17096 336d8edc1c83a874d6670803b96259ea 190 Gene3D G3DSA:3.40.50.360 4 182 8.9E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_13245 bd99ca4350cae5f5ebe3bba2ab5a2191 126 SUPERFAMILY SSF56214 3 125 2.75E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_13245 bd99ca4350cae5f5ebe3bba2ab5a2191 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.691 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEJY3_13245 bd99ca4350cae5f5ebe3bba2ab5a2191 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 5.9E-23 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_13245 bd99ca4350cae5f5ebe3bba2ab5a2191 126 Gene3D G3DSA:3.90.470.20 1 126 1.1E-42 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEJY3_13245 bd99ca4350cae5f5ebe3bba2ab5a2191 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 4.0E-34 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.1E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.931 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 Gene3D G3DSA:2.70.98.90 61 330 2.6E-91 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 Pfam PF02096 60Kd inner membrane protein 351 530 6.8E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEJY3_00020 99a4a4f56b770bb0233eb112fc4e7833 540 Pfam PF14849 YidC periplasmic domain 65 340 2.0E-85 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Gene3D G3DSA:2.40.50.140 1 114 9.5E-50 T 14-10-2018 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Gene3D G3DSA:4.10.950.10 196 274 1.8E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-130 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Gene3D G3DSA:2.30.30.30 115 195 8.3E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.44 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 SUPERFAMILY SSF50104 127 272 1.44E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 PIRSF PIRSF002158 13 274 7.7E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.7E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 SMART SM01382 124 252 1.0E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 SUPERFAMILY SSF50249 2 125 1.82E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_01295 73698af2eebd0bc71f08bf1e626b560c 274 SMART SM01383 42 118 1.8E-44 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Pfam PF00364 Biotin-requiring enzyme 607 665 3.5E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 6.1E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 SUPERFAMILY SSF56059 83 344 2.3E-70 T 14-10-2018 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 SUPERFAMILY SSF52440 1 113 1.08E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 623 640 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 7.2E-80 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Gene3D G3DSA:2.40.50.100 601 667 2.4E-20 T 14-10-2018 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 SMART SM00878 336 448 2.7E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 SUPERFAMILY SSF51246 331 451 2.15E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 Gene3D G3DSA:3.30.470.130 1 456 6.1E-200 T 14-10-2018 VEJY3_18526 d19888e9cf8031760289f8aa2f776497 686 SUPERFAMILY SSF51230 593 666 3.66E-19 T 14-10-2018 IPR011053 Single hybrid motif VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_14510 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEJY3_05495 785856c0e4e222901378ab5f2a3cefc8 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 2.0E-31 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 VEJY3_21446 582f6d6560a614f3a21cd8455919091f 686 Gene3D G3DSA:3.40.190.10 85 371 1.3E-48 T 14-10-2018 VEJY3_21446 582f6d6560a614f3a21cd8455919091f 686 PIRSF PIRSF002741 141 659 1.2E-42 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_21446 582f6d6560a614f3a21cd8455919091f 686 SUPERFAMILY SSF53850 103 652 5.61E-77 T 14-10-2018 VEJY3_21446 582f6d6560a614f3a21cd8455919091f 686 Gene3D G3DSA:3.10.105.10 385 627 1.2E-25 T 14-10-2018 VEJY3_21446 582f6d6560a614f3a21cd8455919091f 686 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 154 546 1.6E-60 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 SUPERFAMILY SSF103473 8 434 8.11E-41 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 Gene3D G3DSA:1.20.1250.20 219 455 4.1E-60 T 14-10-2018 VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 Gene3D G3DSA:1.20.1250.20 2 218 1.5E-66 T 14-10-2018 VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 Pfam PF00854 POT family 230 405 3.1E-31 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 Pfam PF00854 POT family 85 197 3.2E-27 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VEJY3_03745 5428be41f686fc36af7cccbdc20cddf1 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 Gene3D G3DSA:3.40.50.450 4 287 1.6E-116 T 14-10-2018 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 3.8E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 PIRSF PIRSF000532 1 320 2.0E-126 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.381 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 Pfam PF00365 Phosphofructokinase 4 276 9.6E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 SUPERFAMILY SSF53784 3 310 3.79E-112 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEJY3_14520 55978f4da39f5167462380bd6231bf9b 320 Gene3D G3DSA:3.40.50.460 143 252 1.6E-116 T 14-10-2018 VEJY3_20076 8c6d8c5fbf100ff34ed166ed7070594c 222 SUPERFAMILY SSF56784 5 218 1.6E-44 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_20076 8c6d8c5fbf100ff34ed166ed7070594c 222 Gene3D G3DSA:3.40.50.1000 9 195 9.4E-42 T 14-10-2018 IPR023214 HAD superfamily VEJY3_20076 8c6d8c5fbf100ff34ed166ed7070594c 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 2.2E-27 T 14-10-2018 VEJY3_20076 8c6d8c5fbf100ff34ed166ed7070594c 222 Gene3D G3DSA:1.10.150.240 21 88 9.4E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_20076 8c6d8c5fbf100ff34ed166ed7070594c 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 189 3.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 Pfam PF00072 Response regulator receiver domain 722 830 4.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 7.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 7.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 7.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 7.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 4.1E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SMART SM00387 574 683 1.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SUPERFAMILY SSF52172 720 834 1.08E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 Gene3D G3DSA:3.30.565.10 527 685 5.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SMART SM00448 720 830 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SMART SM00388 461 530 0.0043 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 Gene3D G3DSA:1.10.287.130 418 526 8.5E-6 T 14-10-2018 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SUPERFAMILY SSF47384 452 517 3.92E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 Gene3D G3DSA:3.40.50.2300 710 844 6.6E-32 T 14-10-2018 VEJY3_10305 9b3c6e373b742ebc9dad8338538f4452 845 SUPERFAMILY SSF55874 533 684 3.93E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 SUPERFAMILY SSF53901 14 293 1.95E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 SUPERFAMILY SSF53901 296 434 1.99E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 5.9E-62 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 PIRSF PIRSF000429 8 435 3.8E-117 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 1.7E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_11380 8fb80b1796e8767d818afebb310b1ffe 435 Gene3D G3DSA:3.40.47.10 4 434 3.3E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_05660 8326eea8d331096a76feca69f5672dcc 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 2.1E-186 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VEJY3_05660 8326eea8d331096a76feca69f5672dcc 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 3.4E-71 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEJY3_05660 8326eea8d331096a76feca69f5672dcc 394 PIRSF PIRSF000014 1 394 5.5E-159 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VEJY3_05660 8326eea8d331096a76feca69f5672dcc 394 SUPERFAMILY SSF48695 12 187 8.72E-59 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_05660 8326eea8d331096a76feca69f5672dcc 394 Gene3D G3DSA:1.10.3820.10 15 192 4.9E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEJY3_11915 a94fb7ac6ad1775fe564b4988506524d 215 SUPERFAMILY SSF53328 2 200 9.68E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_11915 a94fb7ac6ad1775fe564b4988506524d 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_11915 a94fb7ac6ad1775fe564b4988506524d 215 Pfam PF00551 Formyl transferase 2 181 1.9E-64 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_11915 a94fb7ac6ad1775fe564b4988506524d 215 Gene3D G3DSA:3.40.50.170 2 213 7.2E-87 T 14-10-2018 VEJY3_11915 a94fb7ac6ad1775fe564b4988506524d 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.176 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 Gene3D G3DSA:3.30.70.920 56 148 7.6E-14 T 14-10-2018 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 SUPERFAMILY SSF46785 1 55 3.44E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 SMART SM00344 1 110 6.0E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 SUPERFAMILY SSF54909 62 145 5.23E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.8E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.8E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.8E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 Pfam PF01037 Lrp/AsnC ligand binding domain 78 139 4.1E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_17476 570caad5ebff3a8a08bf84e0d285740e 151 Gene3D G3DSA:1.10.10.10 1 52 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 444 528 3.1E-19 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 255 364 1.07E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 362 434 2.0E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 358 443 2.8E-23 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 14-10-2018 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 190 260 6.0E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 275 347 1.8E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 103 171 1.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 362 434 6.5E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 449 520 1.5E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SMART SM00316 19 87 0.0012 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 PIRSF PIRSF002111 1 534 2.1E-217 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 429 539 4.4E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10560 5d944cf6fc28e7af806df839bb41e40a 556 SUPERFAMILY SSF50249 347 438 1.12E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_11750 07fa3791a56eed6800c05b9fcf35b108 253 Pfam PF13643 Domain of unknown function (DUF4145) 114 201 2.1E-8 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 Pfam PF03466 LysR substrate binding domain 102 302 4.3E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 SUPERFAMILY SSF53850 120 307 3.26E-17 T 14-10-2018 VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 SUPERFAMILY SSF46785 15 98 4.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 8.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 Gene3D G3DSA:3.40.190.290 118 309 1.5E-10 T 14-10-2018 VEJY3_21586 af513a6ee0c658db3a3953cc50bdaa0a 310 Gene3D G3DSA:1.10.10.10 14 102 9.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_08660 1a96d1b3b29aa33c6f88931d359e5c34 273 Pfam PF01261 Xylose isomerase-like TIM barrel 20 225 1.8E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_08660 1a96d1b3b29aa33c6f88931d359e5c34 273 SUPERFAMILY SSF51658 3 272 1.66E-59 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08660 1a96d1b3b29aa33c6f88931d359e5c34 273 Gene3D G3DSA:3.20.20.150 7 273 1.3E-55 T 14-10-2018 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 441 451 - T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Gene3D G3DSA:2.130.10.30 219 486 2.5E-57 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Gene3D G3DSA:2.130.10.30 88 218 2.0E-21 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 SUPERFAMILY SSF50985 316 477 8.11E-31 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 194 210 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 298 314 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 336 352 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 352 366 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 232 245 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 251 267 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 444 462 1.6E-21 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 403 451 3.8E-6 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 193 245 5.3E-13 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 297 346 9.6E-10 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 249 294 7.3E-10 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 131 171 5.8E-6 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 VEJY3_03060 1c4ee1d7ceeec706722eb5391f9feccb 486 SUPERFAMILY SSF50985 117 369 2.09E-61 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VEJY3_17391 5297b332c43f717097419d6fe87584df 552 Pfam PF08019 Domain of unknown function (DUF1705) 59 211 1.7E-48 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VEJY3_17391 5297b332c43f717097419d6fe87584df 552 SUPERFAMILY SSF53649 242 536 8.41E-19 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_17391 5297b332c43f717097419d6fe87584df 552 Gene3D G3DSA:3.40.720.10 217 551 3.4E-86 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_17391 5297b332c43f717097419d6fe87584df 552 Pfam PF00884 Sulfatase 242 532 1.0E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_22716 505f094b3d8d4c00cef76c7b740def08 447 PIRSF PIRSF006060 1 447 2.4E-56 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_22716 505f094b3d8d4c00cef76c7b740def08 447 Gene3D G3DSA:1.20.1740.10 3 446 1.9E-63 T 14-10-2018 VEJY3_22716 505f094b3d8d4c00cef76c7b740def08 447 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 437 31.815 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VEJY3_22716 505f094b3d8d4c00cef76c7b740def08 447 Pfam PF13520 Amino acid permease 14 406 1.2E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_07830 c5df3fe3cdd4ebc6303a5134998ba13c 158 SUPERFAMILY SSF55729 4 146 4.82E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_07830 c5df3fe3cdd4ebc6303a5134998ba13c 158 Pfam PF00583 Acetyltransferase (GNAT) family 31 146 7.9E-17 T 14-10-2018 IPR000182 GNAT domain VEJY3_07830 c5df3fe3cdd4ebc6303a5134998ba13c 158 Gene3D G3DSA:3.40.630.30 3 137 3.4E-31 T 14-10-2018 VEJY3_16531 b00c75f6aaa01c078c23bf5263e7fba6 462 Gene3D G3DSA:1.20.1600.10 56 456 6.4E-108 T 14-10-2018 VEJY3_16531 b00c75f6aaa01c078c23bf5263e7fba6 462 Pfam PF02321 Outer membrane efflux protein 67 248 3.4E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_16531 b00c75f6aaa01c078c23bf5263e7fba6 462 Pfam PF02321 Outer membrane efflux protein 281 455 9.2E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_16531 b00c75f6aaa01c078c23bf5263e7fba6 462 Gene3D G3DSA:2.20.200.10 103 346 6.4E-108 T 14-10-2018 VEJY3_16531 b00c75f6aaa01c078c23bf5263e7fba6 462 SUPERFAMILY SSF56954 5 457 7.59E-96 T 14-10-2018 VEJY3_00780 94b8bea1d9c8965dfd2cf031dceb1e53 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 1.2E-89 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEJY3_00780 94b8bea1d9c8965dfd2cf031dceb1e53 254 PIRSF PIRSF028069 4 254 2.8E-97 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SMART SM00388 129 194 3.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Gene3D G3DSA:3.30.450.20 1 112 4.1E-28 T 14-10-2018 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SMART SM00091 4 72 8.8E-8 T 14-10-2018 IPR000014 PAS domain VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Pfam PF00989 PAS fold 7 111 4.1E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SUPERFAMILY SSF55874 198 347 6.94E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 7.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 7.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 7.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SMART SM00387 233 348 4.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Gene3D G3DSA:3.30.565.10 192 348 1.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 14-10-2018 VEJY3_00540 06dc0907e6df20dd5215a226ba7778b9 348 SUPERFAMILY SSF55785 8 103 4.19E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_13520 9f7f50854610e985b4af3fbc25a6d5f6 380 Pfam PF01464 Transglycosylase SLT domain 212 333 5.7E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VEJY3_13520 9f7f50854610e985b4af3fbc25a6d5f6 380 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 229 257 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEJY3_13520 9f7f50854610e985b4af3fbc25a6d5f6 380 Gene3D G3DSA:1.10.530.10 191 372 1.1E-48 T 14-10-2018 VEJY3_13520 9f7f50854610e985b4af3fbc25a6d5f6 380 SUPERFAMILY SSF53955 189 372 2.28E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_13520 9f7f50854610e985b4af3fbc25a6d5f6 380 Pfam PF11873 Domain of unknown function (DUF3393) 3 206 4.7E-79 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VEJY3_22451 f855f5919f7bc215dc7326eaa3bfbf5a 276 Gene3D G3DSA:3.40.50.620 1 276 1.1E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_22451 f855f5919f7bc215dc7326eaa3bfbf5a 276 SUPERFAMILY SSF52402 2 276 3.03E-79 T 14-10-2018 VEJY3_22451 f855f5919f7bc215dc7326eaa3bfbf5a 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.316 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VEJY3_22451 f855f5919f7bc215dc7326eaa3bfbf5a 276 Pfam PF02540 NAD synthase 21 270 6.2E-64 T 14-10-2018 IPR022310 NAD/GMP synthase VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 Gene3D G3DSA:1.10.800.10 1 264 1.3E-95 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 6.1E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 6.1E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 6.1E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 230 2.4E-46 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 SUPERFAMILY SSF56534 3 235 2.88E-96 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VEJY3_21801 63f4fd2f28ccd133753eb8e02a06fa56 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 Gene3D G3DSA:3.40.50.300 8 228 2.7E-59 T 14-10-2018 VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 SUPERFAMILY SSF52540 18 294 1.39E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 2.2E-22 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 2.6E-19 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 Gene3D G3DSA:1.10.8.300 229 301 2.5E-25 T 14-10-2018 VEJY3_19481 9096dc65d8f8df29a6d7eee30e084387 553 SMART SM00382 46 189 1.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23141 8329ec1f3be661ae295200abe818ee26 277 Gene3D G3DSA:3.40.50.300 1 201 2.4E-5 T 14-10-2018 VEJY3_23141 8329ec1f3be661ae295200abe818ee26 277 SUPERFAMILY SSF52540 18 149 9.4E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23141 8329ec1f3be661ae295200abe818ee26 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 8.9E-57 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 Gene3D G3DSA:3.20.20.70 2 358 5.0E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 SUPERFAMILY SSF51569 4 356 7.87E-131 T 14-10-2018 VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 PIRSF PIRSF001359 13 358 5.1E-95 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_13380 60a29c38863e8a097a92444b151a10ed 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.8E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_13790 063bd8d9d06dcae3c5494fe4b89e9c62 299 Pfam PF04085 rod shape-determining protein MreC 123 269 2.9E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VEJY3_13790 063bd8d9d06dcae3c5494fe4b89e9c62 299 Gene3D G3DSA:2.40.10.350 180 257 6.0E-36 T 14-10-2018 VEJY3_13790 063bd8d9d06dcae3c5494fe4b89e9c62 299 Gene3D G3DSA:2.40.10.340 122 266 6.0E-36 T 14-10-2018 VEJY3_13790 063bd8d9d06dcae3c5494fe4b89e9c62 299 PIRSF PIRSF038471 2 283 1.2E-80 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 Pfam PF12848 ABC transporter 217 295 2.3E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 Pfam PF00005 ABC transporter 17 178 3.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 SUPERFAMILY SSF52540 2 258 1.72E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 SUPERFAMILY SSF52540 277 494 1.15E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 SMART SM00382 26 223 7.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 SMART SM00382 337 503 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 Gene3D G3DSA:3.40.50.300 7 273 6.0E-59 T 14-10-2018 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 Gene3D G3DSA:3.40.50.300 276 540 1.2E-54 T 14-10-2018 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_14240 91b7534e51a4909dbcef66a3d5949aa8 639 Pfam PF00005 ABC transporter 328 459 3.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 SUPERFAMILY SSF46894 233 294 7.14E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 SMART SM00448 9 120 4.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 SUPERFAMILY SSF52172 7 138 4.27E-39 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 253 269 9.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 269 281 9.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 239 253 9.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 Pfam PF00072 Response regulator receiver domain 11 120 1.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 SMART SM00421 236 293 5.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 Gene3D G3DSA:3.40.50.12740 8 203 3.9E-40 T 14-10-2018 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 Pfam PF00196 Bacterial regulatory proteins, luxR family 239 291 1.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_06830 04760622ab66eb36d8d6a549c44a8f38 300 Gene3D G3DSA:1.10.10.10 233 297 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11620 128fcee1555d46c6ccba372ab77eb4a3 668 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 433 657 8.8E-56 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VEJY3_11620 128fcee1555d46c6ccba372ab77eb4a3 668 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 6.0E-20 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VEJY3_11620 128fcee1555d46c6ccba372ab77eb4a3 668 Pfam PF07196 Flagellin hook IN motif 125 178 1.3E-7 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_22396 b41b301cc374dcbe96ae70e0f463738d 114 SMART SM00507 19 74 3.0E-5 T 14-10-2018 IPR003615 HNH nuclease VEJY3_22396 b41b301cc374dcbe96ae70e0f463738d 114 Pfam PF01844 HNH endonuclease 31 79 4.9E-11 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 SMART SM00729 84 293 2.1E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.12 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.4E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 SUPERFAMILY SSF102114 52 315 4.32E-68 T 14-10-2018 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 PIRSF PIRSF005963 1 321 2.3E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 Pfam PF04055 Radical SAM superfamily 91 252 3.0E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_03290 16a038f29834719f160403eeec4c5874 321 Gene3D G3DSA:3.20.20.70 49 293 2.6E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_19981 3172e301678be67d309376977eb28264 413 Gene3D G3DSA:2.40.160.60 22 413 2.5E-125 T 14-10-2018 VEJY3_19981 3172e301678be67d309376977eb28264 413 SUPERFAMILY SSF56935 22 413 6.87E-92 T 14-10-2018 VEJY3_19981 3172e301678be67d309376977eb28264 413 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 412 2.4E-129 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Gene3D G3DSA:2.40.30.170 44 269 1.6E-65 T 14-10-2018 VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Gene3D G3DSA:2.40.50.100 57 189 1.6E-65 T 14-10-2018 VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 SUPERFAMILY SSF111369 48 267 4.58E-28 T 14-10-2018 VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Pfam PF13533 Biotin-lipoyl like 57 104 2.2E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Gene3D G3DSA:1.10.287.470 91 149 1.6E-65 T 14-10-2018 VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Pfam PF13437 HlyD family secretion protein 155 259 1.8E-5 T 14-10-2018 VEJY3_20181 e670557b42bcc83bfebb2d229f62e45e 353 Gene3D G3DSA:2.40.420.20 270 346 1.6E-65 T 14-10-2018 VEJY3_03990 50ad37ee5a2871f1f3225ccf1da0c419 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 4.0E-34 T 14-10-2018 IPR027354 YcgL domain VEJY3_03990 50ad37ee5a2871f1f3225ccf1da0c419 94 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 26.615 T 14-10-2018 IPR027354 YcgL domain VEJY3_03990 50ad37ee5a2871f1f3225ccf1da0c419 94 SUPERFAMILY SSF160191 1 92 8.5E-37 T 14-10-2018 IPR038068 YcgL-like superfamily VEJY3_03990 50ad37ee5a2871f1f3225ccf1da0c419 94 Pfam PF05166 YcgL domain 3 74 6.8E-31 T 14-10-2018 IPR027354 YcgL domain VEJY3_03990 50ad37ee5a2871f1f3225ccf1da0c419 94 Gene3D G3DSA:3.10.510.20 1 73 1.2E-28 T 14-10-2018 IPR038068 YcgL-like superfamily VEJY3_12930 7ab0f7e85799d410569d6b761afc95cf 242 Gene3D G3DSA:2.40.50.580 1 80 3.7E-28 T 14-10-2018 VEJY3_12930 7ab0f7e85799d410569d6b761afc95cf 242 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.908 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VEJY3_12930 7ab0f7e85799d410569d6b761afc95cf 242 Gene3D G3DSA:3.40.1350.60 81 237 1.3E-54 T 14-10-2018 VEJY3_12930 7ab0f7e85799d410569d6b761afc95cf 242 Pfam PF03749 Sugar fermentation stimulation protein 13 229 4.1E-76 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.546 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 Gene3D G3DSA:3.30.70.1250 116 237 2.5E-148 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 SUPERFAMILY SSF143856 118 234 1.7E-47 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 Gene3D G3DSA:3.40.720.10 3 406 2.5E-148 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 PIRSF PIRSF001491 1 406 1.9E-159 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 SUPERFAMILY SSF53649 1 406 4.97E-69 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_12590 c985e95d6357302f22114b20fd20da6a 406 Pfam PF01676 Metalloenzyme superfamily 2 397 3.0E-42 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VEJY3_12305 99a20fe7a4bcd5e8e5af2461849d01f6 305 Gene3D G3DSA:3.30.70.270 136 304 9.1E-51 T 14-10-2018 VEJY3_12305 99a20fe7a4bcd5e8e5af2461849d01f6 305 SMART SM00267 130 301 1.9E-51 T 14-10-2018 IPR000160 GGDEF domain VEJY3_12305 99a20fe7a4bcd5e8e5af2461849d01f6 305 SUPERFAMILY SSF55073 146 302 6.36E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_12305 99a20fe7a4bcd5e8e5af2461849d01f6 305 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 3.4E-44 T 14-10-2018 IPR000160 GGDEF domain VEJY3_08010 bf38144867c351b00a29937ff75aee7d 203 Pfam PF12261 Thermostable hemolysin 19 188 4.0E-60 T 14-10-2018 IPR022050 Thermostable hemolysin VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 Gene3D G3DSA:3.30.300.130 103 191 1.2E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 1.7E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.477 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 SUPERFAMILY SSF89360 3 99 9.22E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 SUPERFAMILY SSF117916 97 186 2.62E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 Pfam PF01106 NifU-like domain 113 179 2.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 Gene3D G3DSA:2.60.300.12 2 100 1.9E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_00675 0c0615bb23691b7a4f83c9dfb6cb162d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 8.0E-26 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 Pfam PF12833 Helix-turn-helix domain 265 343 1.1E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 Pfam PF00072 Response regulator receiver domain 4 116 2.0E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 326 342 9.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 326 9.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 SMART SM00448 2 116 9.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 Gene3D G3DSA:3.40.50.2300 2 148 3.6E-22 T 14-10-2018 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 Gene3D G3DSA:1.10.10.60 242 291 2.4E-11 T 14-10-2018 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 SUPERFAMILY SSF46689 296 343 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 SUPERFAMILY SSF52172 1 121 6.97E-23 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 SMART SM00342 259 342 1.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 SUPERFAMILY SSF46689 243 293 2.19E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_08515 fe2a66c1017e4af8d26428832d15f63b 344 Gene3D G3DSA:1.10.10.60 292 344 1.7E-13 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 290 9.1E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PIRSF PIRSF037149 1 835 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Gene3D G3DSA:3.50.50.60 109 244 6.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 104 113 2.6E-10 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 2.6E-10 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.6E-10 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 2.6E-10 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 SUPERFAMILY SSF51905 148 307 7.95E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Gene3D G3DSA:3.50.50.60 7 281 6.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 768 1.7E-18 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 SUPERFAMILY SSF56014 633 808 7.85E-51 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 SUPERFAMILY SSF51905 2 191 6.26E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 2.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 2.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 1.4E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 SUPERFAMILY SSF55124 502 641 1.42E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Gene3D G3DSA:3.30.413.10 631 796 3.4E-35 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 5.7E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Pfam PF04324 BFD-like [2Fe-2S] binding domain 485 533 1.7E-4 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 Gene3D G3DSA:1.10.10.1100 423 477 8.2E-14 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.4E-16 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.4E-16 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.4E-16 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.4E-16 T 14-10-2018 VEJY3_18681 6c7a84903b3205b789c1981c1e8cca9f 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-16 T 14-10-2018 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 Gene3D G3DSA:1.10.10.10 1 90 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 SUPERFAMILY SSF46785 1 82 2.04E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 Pfam PF03466 LysR substrate binding domain 89 289 8.6E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 Gene3D G3DSA:3.40.190.10 165 265 9.7E-28 T 14-10-2018 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 Gene3D G3DSA:3.40.190.10 91 287 9.7E-28 T 14-10-2018 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00160 0f6523a02c78fe14a92c33e3ff872c45 296 SUPERFAMILY SSF53850 89 292 1.16E-29 T 14-10-2018 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 Pfam PF13424 Tetratricopeptide repeat 254 317 3.1E-7 T 14-10-2018 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 Gene3D G3DSA:1.25.40.10 70 241 3.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 Gene3D G3DSA:1.25.40.10 242 455 1.5E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 SMART SM00028 294 327 0.054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 SMART SM00028 254 287 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 SMART SM00028 174 207 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 SMART SM00028 88 121 0.67 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_03225 37db8eef761bd89f3f44371a57e259b0 760 SUPERFAMILY SSF48452 176 364 5.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16776 b2e5e72de621f965fa6e297c369d7539 96 Gene3D G3DSA:1.10.10.10 27 83 6.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16776 b2e5e72de621f965fa6e297c369d7539 96 Pfam PF02001 Protein of unknown function DUF134 2 89 2.5E-20 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VEJY3_16776 b2e5e72de621f965fa6e297c369d7539 96 SUPERFAMILY SSF88659 36 79 4.36E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_16776 b2e5e72de621f965fa6e297c369d7539 96 Hamap MF_00674 UPF0251 protein . 2 95 23.815 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 SUPERFAMILY SSF46689 8 83 1.3E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 Gene3D G3DSA:1.10.357.10 1 193 1.1E-68 T 14-10-2018 VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 66 190 3.1E-7 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal VEJY3_00185 0b1179c2a11b350a0657113bf96dae0a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_12115 676863c752518f1588d0827a0f53c1a4 146 SUPERFAMILY SSF55729 13 124 3.36E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_12115 676863c752518f1588d0827a0f53c1a4 146 Gene3D G3DSA:3.40.630.30 4 127 5.4E-26 T 14-10-2018 VEJY3_12115 676863c752518f1588d0827a0f53c1a4 146 Pfam PF13302 Acetyltransferase (GNAT) domain 12 117 6.6E-20 T 14-10-2018 IPR000182 GNAT domain VEJY3_02360 9f3443ae073f3c1a12aef524b3da6716 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.5E-51 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_16936 90d0facf69a041bcc7f2f6589075f4bd 259 Gene3D G3DSA:1.10.287.700 18 115 5.3E-5 T 14-10-2018 VEJY3_16936 90d0facf69a041bcc7f2f6589075f4bd 259 Pfam PF04366 Las17-binding protein actin regulator 171 255 3.4E-6 T 14-10-2018 IPR007461 Ysc84 actin-binding domain VEJY3_13090 f93785150397692654d27ac1b9244241 425 Pfam PF00571 CBS domain 278 325 2.3E-5 T 14-10-2018 IPR000644 CBS domain VEJY3_13090 f93785150397692654d27ac1b9244241 425 SUPERFAMILY SSF54631 192 329 4.04E-24 T 14-10-2018 VEJY3_13090 f93785150397692654d27ac1b9244241 425 Gene3D G3DSA:3.30.465.10 340 418 3.0E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_13090 f93785150397692654d27ac1b9244241 425 Pfam PF01595 Domain of unknown function DUF21 13 181 4.1E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain VEJY3_13090 f93785150397692654d27ac1b9244241 425 Gene3D G3DSA:3.10.580.10 201 330 5.1E-41 T 14-10-2018 VEJY3_13090 f93785150397692654d27ac1b9244241 425 SUPERFAMILY SSF56176 340 422 2.37E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_13090 f93785150397692654d27ac1b9244241 425 SMART SM01091 342 420 1.7E-23 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_13090 f93785150397692654d27ac1b9244241 425 Pfam PF03471 Transporter associated domain 344 418 2.3E-17 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 Gene3D G3DSA:1.10.10.60 228 268 1.7E-10 T 14-10-2018 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 SUPERFAMILY SSF46689 221 266 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 Pfam PF12833 Helix-turn-helix domain 195 267 5.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 Gene3D G3DSA:1.10.10.60 168 227 4.5E-14 T 14-10-2018 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 SUPERFAMILY SSF51215 26 135 9.29E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 SUPERFAMILY SSF46689 170 218 9.86E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 1.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 1.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 SMART SM00342 185 267 1.6E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_15160 bbb7028e7c5d252e4dbc4617f3f8690f 268 Pfam PF02311 AraC-like ligand binding domain 18 138 3.6E-19 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 4.2E-39 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 SUPERFAMILY SSF51419 8 234 8.11E-60 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 120 132 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 266 281 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 26 42 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 60 78 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 155 166 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 249 264 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 287 304 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 339 352 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 PRINTS PR00992 Alanine racemase signature 192 219 1.5E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 SUPERFAMILY SSF50621 227 357 4.88E-42 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 Gene3D G3DSA:3.20.20.10 10 217 8.2E-121 T 14-10-2018 IPR029066 PLP-binding barrel VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 Hamap MF_01201 Alanine racemase. 1 357 32.121 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 SMART SM01005 233 357 9.6E-61 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 7.7E-63 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEJY3_22326 166e0eeee7bce94ddd6d800ed933a03e 359 Gene3D G3DSA:2.40.37.10 8 352 8.2E-121 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 SMART SM01118 2 208 3.0E-42 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 Gene3D G3DSA:2.40.320.10 1 204 5.8E-36 T 14-10-2018 VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 Pfam PF01928 CYTH domain 3 202 6.1E-32 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 SUPERFAMILY SSF55154 1 222 3.6E-51 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 Pfam PF05235 CHAD domain 237 424 4.7E-7 T 14-10-2018 IPR007899 CHAD domain VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 Gene3D G3DSA:1.40.20.10 218 444 2.5E-10 T 14-10-2018 IPR038186 CHAD domain superfamily VEJY3_01895 0d9d82d3941e91b4304ecd445e01b49a 510 SMART SM00880 234 502 5.0E-21 T 14-10-2018 IPR007899 CHAD domain VEJY3_18396 32f7062330ba3c10e458858de0693312 545 Gene3D G3DSA:3.30.9.90 79 446 1.2E-187 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 SUPERFAMILY SSF54373 211 306 9.02E-36 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 Gene3D G3DSA:3.50.50.60 7 382 1.2E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_18396 32f7062330ba3c10e458858de0693312 545 SUPERFAMILY SSF54862 446 545 1.05E-27 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 Gene3D G3DSA:3.30.70.20 447 540 1.5E-37 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 2.2E-6 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.2E-6 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 542 7.8E-48 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 8.7E-7 T 14-10-2018 VEJY3_18396 32f7062330ba3c10e458858de0693312 545 SUPERFAMILY SSF51905 4 444 8.82E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 Gene3D G3DSA:3.40.50.150 8 182 2.8E-51 T 14-10-2018 VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.811 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 PIRSF PIRSF037565 1 377 1.6E-171 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 SUPERFAMILY SSF53335 191 357 1.66E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 Gene3D G3DSA:3.40.50.150 187 381 2.3E-46 T 14-10-2018 VEJY3_12245 10fb05799cd911375a862c9d18765c5a 384 Pfam PF05175 Methyltransferase small domain 200 373 1.5E-53 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 SUPERFAMILY SSF48498 80 190 3.26E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 SUPERFAMILY SSF46689 2 74 2.1E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 6.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 Gene3D G3DSA:1.10.357.10 65 194 1.8E-16 T 14-10-2018 VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 Pfam PF16925 Bacterial transcriptional repressor C-terminal 96 163 3.3E-7 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_20551 d1c6be3bfa71cb5628b45729d95125f1 201 Gene3D G3DSA:1.10.10.60 1 64 4.0E-20 T 14-10-2018 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.9E-127 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_23861 531895bb46d230ddeda2517f7b69215b 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 1.8E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 Gene3D G3DSA:3.20.20.80 1 480 2.9E-158 T 14-10-2018 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 1.0E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 310 324 1.0E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 1.0E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 1.0E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 1.0E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 SUPERFAMILY SSF51445 3 473 2.45E-161 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_17251 a68531479f3a91662d5ba7a714e9afcd 480 Pfam PF00232 Glycosyl hydrolase family 1 3 477 2.1E-136 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEJY3_18001 0f63a80b37125a40f137159be871d936 411 Pfam PF01266 FAD dependent oxidoreductase 6 397 6.0E-69 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_18001 0f63a80b37125a40f137159be871d936 411 SUPERFAMILY SSF51905 5 301 6.91E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_08470 51c24587ccacc70541bb5abb918551ca 154 SUPERFAMILY SSF143744 22 152 1.1E-32 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_08470 51c24587ccacc70541bb5abb918551ca 154 Gene3D G3DSA:3.30.450.150 15 154 1.8E-40 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_08470 51c24587ccacc70541bb5abb918551ca 154 Pfam PF03928 Haem-degrading 25 149 2.6E-25 T 14-10-2018 IPR005624 Haem-degrading VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 Gene3D G3DSA:3.30.450.90 152 288 3.2E-46 T 14-10-2018 VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 Pfam PF00437 Type II/IV secretion system protein 188 455 2.9E-86 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 Gene3D G3DSA:3.30.300.160 68 140 1.1E-10 T 14-10-2018 VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 SUPERFAMILY SSF160246 2 140 2.07E-32 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 142 1.6E-15 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 Gene3D G3DSA:3.40.50.300 290 560 1.1E-105 T 14-10-2018 VEJY3_13030 8dc927e51a965e2a20ba6b87d30d9828 561 SUPERFAMILY SSF52540 173 558 8.63E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 4.9E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 SUPERFAMILY SSF52518 474 700 6.95E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 PIRSF PIRSF000156 1 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 SUPERFAMILY SSF52518 56 469 1.61E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 Gene3D G3DSA:3.40.50.970 472 705 4.3E-110 T 14-10-2018 VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 SUPERFAMILY SSF52922 701 885 2.79E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 Gene3D G3DSA:3.40.50.970 55 471 5.7E-133 T 14-10-2018 VEJY3_13005 1444ab072437f805893d27b247a40b3f 886 Gene3D G3DSA:3.40.50.920 706 886 1.8E-69 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_01225 1cf361860ac9e1bb119f411ef2bcc785 335 PIRSF PIRSF004532 1 331 2.9E-133 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VEJY3_01225 1cf361860ac9e1bb119f411ef2bcc785 335 Gene3D G3DSA:3.40.190.90 109 276 3.1E-124 T 14-10-2018 VEJY3_01225 1cf361860ac9e1bb119f411ef2bcc785 335 Gene3D G3DSA:3.30.540.10 7 319 3.1E-124 T 14-10-2018 VEJY3_01225 1cf361860ac9e1bb119f411ef2bcc785 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.4E-127 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VEJY3_01225 1cf361860ac9e1bb119f411ef2bcc785 335 SUPERFAMILY SSF56655 1 324 1.83E-105 T 14-10-2018 VEJY3_11195 6eefe52b2c8e5975d48655607201077a 82 Pfam PF04226 Transglycosylase associated protein 35 81 5.0E-12 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 VEJY3_20466 15f0a4b4d28546b25abae4ac1a504b07 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 101 2.4E-15 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEJY3_20466 15f0a4b4d28546b25abae4ac1a504b07 156 SUPERFAMILY SSF53927 3 126 3.16E-29 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_20466 15f0a4b4d28546b25abae4ac1a504b07 156 Gene3D G3DSA:3.40.140.10 1 152 7.3E-29 T 14-10-2018 VEJY3_02585 2c1c0b951d3a3647b3b133e20e125f35 466 Pfam PF01136 Peptidase family U32 80 355 1.3E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEJY3_02585 2c1c0b951d3a3647b3b133e20e125f35 466 Gene3D G3DSA:2.40.30.10 367 453 2.6E-8 T 14-10-2018 VEJY3_02585 2c1c0b951d3a3647b3b133e20e125f35 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEJY3_02585 2c1c0b951d3a3647b3b133e20e125f35 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 8.3E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal VEJY3_08015 439b04d85bb352d227f996fb99375256 511 SUPERFAMILY SSF56801 2 483 8.24E-84 T 14-10-2018 VEJY3_08015 439b04d85bb352d227f996fb99375256 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_08015 439b04d85bb352d227f996fb99375256 511 Pfam PF00501 AMP-binding enzyme 9 388 1.8E-61 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_08015 439b04d85bb352d227f996fb99375256 511 Gene3D G3DSA:3.40.50.12780 4 381 1.6E-69 T 14-10-2018 VEJY3_19741 9826a8e3a8dc0e72e2d56d244cf75f78 229 Gene3D G3DSA:1.10.3720.10 3 224 5.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19741 9826a8e3a8dc0e72e2d56d244cf75f78 229 SUPERFAMILY SSF161098 6 214 9.42E-48 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19741 9826a8e3a8dc0e72e2d56d244cf75f78 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 209 3.9E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_10175 3d42feae9b5daa7559b4037ad0eae97c 170 Pfam PF13740 ACT domain 5 67 6.4E-10 T 14-10-2018 VEJY3_10175 3d42feae9b5daa7559b4037ad0eae97c 170 SUPERFAMILY SSF55021 89 167 2.91E-10 T 14-10-2018 VEJY3_10175 3d42feae9b5daa7559b4037ad0eae97c 170 PIRSF PIRSF028103 1 169 8.1E-40 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VEJY3_10175 3d42feae9b5daa7559b4037ad0eae97c 170 Gene3D G3DSA:3.30.70.260 86 169 6.3E-13 T 14-10-2018 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 SUPERFAMILY SSF52540 230 530 4.39E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 SUPERFAMILY SSF52540 421 713 1.06E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Gene3D G3DSA:3.40.50.300 496 740 2.7E-49 T 14-10-2018 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 SMART SM00487 289 510 4.4E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Gene3D G3DSA:3.40.50.300 280 495 2.8E-45 T 14-10-2018 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Pfam PF04851 Type III restriction enzyme, res subunit 274 477 1.2E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Gene3D G3DSA:3.90.1570.50 99 262 4.1E-32 T 14-10-2018 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Pfam PF11867 Domain of unknown function (DUF3387) 730 1070 2.1E-113 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 VEJY3_11755 f72db086b7a878766c4dfc79bf5b5811 1075 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 212 5.8E-44 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 Pfam PF00106 short chain dehydrogenase 5 183 2.2E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 Gene3D G3DSA:3.40.50.720 4 217 8.9E-46 T 14-10-2018 VEJY3_05475 80ad68ed1f39b5f0723853e9c865e7aa 241 SUPERFAMILY SSF51735 5 239 9.11E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 SUPERFAMILY SSF53681 8 108 5.1E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 SUPERFAMILY SSF53681 112 262 1.13E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 Gene3D G3DSA:3.40.50.1860 99 208 5.1E-82 T 14-10-2018 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 Hamap MF_00258 Glutamate racemase [murI]. 7 256 33.061 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 Gene3D G3DSA:3.40.50.1860 11 237 5.1E-82 T 14-10-2018 VEJY3_14840 adcb25d4e20a59570bc56f31cfd86a07 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 8.1E-26 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_21716 86673e27c94ee217a5a8312b70f11e75 323 Gene3D G3DSA:3.30.420.40 7 309 1.9E-109 T 14-10-2018 VEJY3_21716 86673e27c94ee217a5a8312b70f11e75 323 Hamap MF_00524 Glucokinase [glk]. 5 317 33.663 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 VEJY3_21716 86673e27c94ee217a5a8312b70f11e75 323 Gene3D G3DSA:3.40.367.20 101 300 1.9E-109 T 14-10-2018 VEJY3_21716 86673e27c94ee217a5a8312b70f11e75 323 SUPERFAMILY SSF53067 5 317 1.41E-61 T 14-10-2018 VEJY3_21716 86673e27c94ee217a5a8312b70f11e75 323 Pfam PF02685 Glucokinase 7 316 3.5E-114 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 VEJY3_00380 087120490e8ca4c0b5380a6cffd3e613 158 Pfam PF07811 TadE-like protein 10 49 2.1E-5 T 14-10-2018 IPR012495 TadE-like VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 Pfam PF00665 Integrase core domain 134 249 1.6E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 Pfam PF13551 Winged helix-turn helix 385 443 1.0E-8 T 14-10-2018 VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 Gene3D G3DSA:3.30.420.10 131 288 5.6E-11 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 Pfam PF13384 Homeodomain-like domain 17 48 2.7E-6 T 14-10-2018 VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 SUPERFAMILY SSF46689 381 484 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 SUPERFAMILY SSF53098 131 264 1.1E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_21071 f2bbe3734ddea2be79feefa60f64dffa 504 SUPERFAMILY SSF46689 11 111 5.38E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 200 7.2E-13 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 Gene3D G3DSA:1.10.357.10 62 202 2.0E-28 T 14-10-2018 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 SUPERFAMILY SSF46689 6 71 3.59E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 Gene3D G3DSA:1.10.10.60 3 59 1.6E-20 T 14-10-2018 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.4E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_10160 f1ffcabde1718cd4180ed64c1e560d95 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 SUPERFAMILY SSF58104 165 470 7.72E-67 T 14-10-2018 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 439 2.8E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 SMART SM00283 213 474 1.1E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 Gene3D G3DSA:1.10.287.950 149 475 4.5E-66 T 14-10-2018 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20071 3b1bd3fe273b98e7cd2e6aa36d80a3e4 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 SUPERFAMILY SSF52540 72 241 5.2E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF01695 IstB-like ATP binding protein 54 229 4.0E-57 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 1.3E-9 T 14-10-2018 IPR013690 IstB-like ATP binding N-terminal VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 PIRSF PIRSF003073 1 246 1.4E-63 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 SMART SM00382 97 228 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20876 d21c597fa00c2e8f12a1af4afa525a09 246 Gene3D G3DSA:3.40.50.300 60 243 8.5E-44 T 14-10-2018 VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 Pfam PF00266 Aminotransferase class-V 81 401 1.3E-29 T 14-10-2018 IPR000192 Aminotransferase class V domain VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 SUPERFAMILY SSF53383 62 467 3.72E-64 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 Gene3D G3DSA:3.90.1150.10 72 460 7.2E-68 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 273 292 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 4.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEJY3_23526 374a3f1d7be3439ea6fd0f5a8e3f97aa 471 Gene3D G3DSA:3.40.640.10 85 358 7.2E-68 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 Gene3D G3DSA:3.40.1010.10 2 120 6.1E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.8E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 Gene3D G3DSA:3.30.950.10 121 241 7.5E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 PIRSF PIRSF005917 1 286 5.4E-109 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 SUPERFAMILY SSF53790 12 232 8.37E-86 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEJY3_02030 4f8a944f8cbc3cc3cc3d6abb970b8d75 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.641 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 SUPERFAMILY SSF46565 1 72 3.79E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 Gene3D G3DSA:1.10.287.110 1 79 6.6E-23 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 Gene3D G3DSA:1.20.1280.20 80 171 1.0E-27 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 SMART SM00271 1 66 4.8E-10 T 14-10-2018 IPR001623 DnaJ domain VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.209 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 SUPERFAMILY SSF47144 78 170 3.79E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 Pfam PF00226 DnaJ domain 2 70 1.3E-7 T 14-10-2018 IPR001623 DnaJ domain VEJY3_02740 6dfa73257c50c033cc8a434c4d429898 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.9E-19 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 Pfam PF08212 Lipocalin-like domain 32 171 1.9E-39 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 1.4E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 Gene3D G3DSA:2.40.128.20 11 172 2.7E-50 T 14-10-2018 IPR012674 Calycin VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 PIRSF PIRSF036893 1 173 1.2E-44 T 14-10-2018 IPR022271 Lipocalin, ApoD type VEJY3_19456 eb43c6ebb7b8ba86f3278df2f9f9975e 173 SUPERFAMILY SSF50814 7 171 4.68E-47 T 14-10-2018 IPR012674 Calycin VEJY3_03430 06368e7f476d8d11881a377727341190 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.9E-43 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEJY3_03430 06368e7f476d8d11881a377727341190 269 SUPERFAMILY SSF48452 191 257 3.14E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03430 06368e7f476d8d11881a377727341190 269 Pfam PF13371 Tetratricopeptide repeat 187 259 2.9E-23 T 14-10-2018 VEJY3_22101 093477d92d4aa7d057c444a23be22853 263 PIRSF PIRSF016184 1 263 1.0E-47 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEJY3_22101 093477d92d4aa7d057c444a23be22853 263 SUPERFAMILY SSF54506 1 263 2.36E-74 T 14-10-2018 VEJY3_22101 093477d92d4aa7d057c444a23be22853 263 Gene3D G3DSA:3.10.310.10 119 251 9.4E-84 T 14-10-2018 VEJY3_22101 093477d92d4aa7d057c444a23be22853 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 7.9E-55 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEJY3_22101 093477d92d4aa7d057c444a23be22853 263 Gene3D G3DSA:3.10.310.10 5 255 9.4E-84 T 14-10-2018 VEJY3_06390 580d9f2fdc7c650dc5b3a70d08f61a5e 407 Pfam PF07690 Major Facilitator Superfamily 16 352 7.2E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_06390 580d9f2fdc7c650dc5b3a70d08f61a5e 407 SUPERFAMILY SSF103473 9 397 3.01E-53 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_06390 580d9f2fdc7c650dc5b3a70d08f61a5e 407 Gene3D G3DSA:1.20.1250.20 5 388 1.4E-43 T 14-10-2018 VEJY3_04915 65bdb90a63a2953af8ad5e6720571004 139 SUPERFAMILY SSF54637 6 133 2.38E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_04915 65bdb90a63a2953af8ad5e6720571004 139 Pfam PF03061 Thioesterase superfamily 22 106 4.3E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_04915 65bdb90a63a2953af8ad5e6720571004 139 PIRSF PIRSF003230 2 138 2.9E-47 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VEJY3_04915 65bdb90a63a2953af8ad5e6720571004 139 Gene3D G3DSA:3.10.129.10 2 137 1.4E-41 T 14-10-2018 VEJY3_20941 3e48516c3b30e4975986b63c0690de76 230 Pfam PF03483 B3/4 domain 64 192 5.0E-18 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEJY3_20941 3e48516c3b30e4975986b63c0690de76 230 SMART SM00873 62 217 1.3E-12 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEJY3_20941 3e48516c3b30e4975986b63c0690de76 230 SUPERFAMILY SSF56037 49 194 7.06E-24 T 14-10-2018 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 SUPERFAMILY SSF57783 66 110 8.5E-14 T 14-10-2018 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 SUPERFAMILY SSF57783 16 64 5.78E-14 T 14-10-2018 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 5.9E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 0.49 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 8.2E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.3E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Gene3D G3DSA:3.30.65.10 11 62 5.9E-9 T 14-10-2018 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 Gene3D G3DSA:3.30.65.10 63 103 5.2E-8 T 14-10-2018 VEJY3_15300 14ef77cc4e6c9987a4a8ef9165a6f2a9 189 SUPERFAMILY SSF57783 109 147 7.31E-5 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 Gene3D G3DSA:3.90.700.10 248 358 2.5E-153 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 SUPERFAMILY SSF46977 425 524 2.22E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 SUPERFAMILY SSF56425 238 353 2.99E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 7.8E-15 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 PIRSF PIRSF000171 336 536 2.3E-13 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 PIRSF PIRSF000171 1 266 1.8E-27 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 Pfam PF00890 FAD binding domain 10 392 3.1E-99 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 9.9E-9 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 9.9E-9 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 Gene3D G3DSA:1.20.58.100 425 540 2.4E-45 T 14-10-2018 VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 Gene3D G3DSA:3.50.50.60 10 404 2.5E-153 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_13300 91fd2325c42e4015e89a824cef97e4e5 540 SUPERFAMILY SSF51905 5 447 1.67E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06520 ff18a15ffcf1897abeffe987ba610a4a 499 Gene3D G3DSA:1.20.1730.10 34 499 9.9E-85 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_06520 ff18a15ffcf1897abeffe987ba610a4a 499 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 422 442 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site VEJY3_06520 ff18a15ffcf1897abeffe987ba610a4a 499 Pfam PF00474 Sodium:solute symporter family 40 440 1.2E-118 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_23321 58756409c645cdda207da5260951868f 249 SMART SM00382 28 220 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23321 58756409c645cdda207da5260951868f 249 Gene3D G3DSA:3.40.50.300 4 246 1.2E-61 T 14-10-2018 VEJY3_23321 58756409c645cdda207da5260951868f 249 SUPERFAMILY SSF52540 5 235 2.37E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23321 58756409c645cdda207da5260951868f 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23321 58756409c645cdda207da5260951868f 249 Pfam PF00005 ABC transporter 19 174 8.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 SUPERFAMILY SSF48452 34 286 1.17E-70 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 Gene3D G3DSA:1.25.40.10 27 296 2.4E-82 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 PIRSF PIRSF004654 1 296 5.4E-92 T 14-10-2018 IPR023605 Lipoprotein NlpI VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 SMART SM00028 100 133 0.0059 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 SMART SM00028 238 271 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 SMART SM00028 66 99 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_12665 9df8e1a8f89293d4ea4cc35a15659da2 305 SMART SM00028 134 167 92.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_14895 41299af359b362cca4a04d9650dd1e95 284 Gene3D G3DSA:1.20.120.1780 168 284 1.2E-12 T 14-10-2018 VEJY3_14895 41299af359b362cca4a04d9650dd1e95 284 Gene3D G3DSA:1.10.357.140 19 167 2.3E-44 T 14-10-2018 VEJY3_14895 41299af359b362cca4a04d9650dd1e95 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.4E-69 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEJY3_14895 41299af359b362cca4a04d9650dd1e95 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.925 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 Pfam PF00571 CBS domain 79 127 5.6E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 Pfam PF00571 CBS domain 4 58 2.8E-12 T 14-10-2018 IPR000644 CBS domain VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 SMART SM00116 84 131 6.3E-6 T 14-10-2018 IPR000644 CBS domain VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 SMART SM00116 11 59 1.0E-6 T 14-10-2018 IPR000644 CBS domain VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 Gene3D G3DSA:3.10.580.10 1 152 1.2E-50 T 14-10-2018 VEJY3_02675 9f9d4cf5456a68f3461b6d3a45b7cc66 152 SUPERFAMILY SSF54631 1 132 6.44E-33 T 14-10-2018 VEJY3_10470 7d0e458c288e7bffebe884f7228d2ff1 255 Gene3D G3DSA:3.30.70.20 41 247 2.0E-67 T 14-10-2018 VEJY3_10470 7d0e458c288e7bffebe884f7228d2ff1 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.0E-29 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_10470 7d0e458c288e7bffebe884f7228d2ff1 255 SUPERFAMILY SSF54862 47 231 3.98E-66 T 14-10-2018 VEJY3_10470 7d0e458c288e7bffebe884f7228d2ff1 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 SUPERFAMILY SSF54747 3 73 3.53E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 SMART SM00649 9 141 9.6E-83 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 Gene3D G3DSA:3.30.1550.10 2 72 1.4E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VEJY3_14785 827eff69a1b42def3b08f047dab14f45 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 3.0E-14 T 14-10-2018 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Gene3D G3DSA:4.10.860.10 618 676 7.8E-19 T 14-10-2018 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 SUPERFAMILY SSF46600 625 672 1.44E-10 T 14-10-2018 IPR036876 UVR domain superfamily VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 SMART SM00487 9 426 3.4E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Gene3D G3DSA:3.40.50.300 416 597 1.5E-49 T 14-10-2018 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 SUPERFAMILY SSF52540 5 416 2.9E-137 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 9.3E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 SMART SM00490 461 547 2.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Gene3D G3DSA:3.40.50.300 270 415 1.4E-50 T 14-10-2018 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.3E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 SUPERFAMILY SSF52540 37 586 5.75E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Gene3D G3DSA:3.40.50.300 1 233 2.3E-72 T 14-10-2018 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Pfam PF04851 Type III restriction enzyme, res subunit 15 129 9.5E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.869 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VEJY3_10910 f3fa5ce6367e67fe4cc035ccb632e9df 676 Pfam PF02151 UvrB/uvrC motif 636 671 4.5E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 1.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 1.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 1.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 Pfam PF12146 Serine aminopeptidase, S33 56 217 5.7E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 SUPERFAMILY SSF53474 6 232 2.14E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_22836 f5f7298faba06db6edec34c1e3bfa708 237 Gene3D G3DSA:3.40.50.1820 3 235 2.3E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 Gene3D G3DSA:3.90.180.10 8 340 4.0E-134 T 14-10-2018 VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 Pfam PF00107 Zinc-binding dehydrogenase 185 307 2.5E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 Gene3D G3DSA:3.40.50.720 166 320 4.0E-134 T 14-10-2018 VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 SMART SM00829 8 341 2.5E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 SUPERFAMILY SSF51735 148 311 5.99E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 SUPERFAMILY SSF50129 11 173 1.14E-50 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_21496 98c813e444a6c0713c4693b03c27659f 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 143 6.8E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_21381 73bedb1ba81e79b4b7578a6e1dae09e5 313 Gene3D G3DSA:3.40.50.1360 54 311 6.4E-56 T 14-10-2018 VEJY3_21381 73bedb1ba81e79b4b7578a6e1dae09e5 313 Gene3D G3DSA:1.10.10.10 1 53 1.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_21381 73bedb1ba81e79b4b7578a6e1dae09e5 313 SUPERFAMILY SSF100950 59 311 1.09E-54 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_21381 73bedb1ba81e79b4b7578a6e1dae09e5 313 Pfam PF04198 Putative sugar-binding domain 59 311 8.6E-67 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 Gene3D G3DSA:3.40.50.720 7 211 5.6E-57 T 14-10-2018 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 216 304 4.0E-23 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 SUPERFAMILY SSF48179 215 305 1.7E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 PIRSF PIRSF000124 20 436 1.7E-47 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 SUPERFAMILY SSF51735 21 205 3.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 SUPERFAMILY SSF52413 314 431 1.19E-29 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 331 431 2.3E-22 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 21 194 1.6E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 PIRSF PIRSF500136 10 438 8.9E-150 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 Gene3D G3DSA:3.40.50.720 214 437 1.3E-55 T 14-10-2018 VEJY3_01090 317ed5e231b0755eab29746d082e589e 438 SMART SM00984 331 431 4.7E-34 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 SUPERFAMILY SSF63380 2 101 8.09E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 SUPERFAMILY SSF52343 104 235 5.24E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 7.6E-22 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 Gene3D G3DSA:3.40.50.80 103 237 6.9E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 6.6E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 6.6E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 6.6E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 6.6E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 6.6E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEJY3_15100 1fce9b9958fbd7321d0a0703519d3e67 237 Gene3D G3DSA:2.40.30.10 1 102 2.7E-22 T 14-10-2018 VEJY3_16216 5a01ab702510979a945edfbfc69d61a8 461 SUPERFAMILY SSF111283 7 459 2.88E-113 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEJY3_16216 5a01ab702510979a945edfbfc69d61a8 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 1.1E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEJY3_16216 5a01ab702510979a945edfbfc69d61a8 461 Gene3D G3DSA:3.30.2290.10 3 221 8.9E-19 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEJY3_16216 5a01ab702510979a945edfbfc69d61a8 461 PIRSF PIRSF004919 1 461 1.3E-115 T 14-10-2018 IPR025502 TldD VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 Gene3D G3DSA:3.40.190.290 97 295 3.9E-38 T 14-10-2018 VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 SUPERFAMILY SSF46785 6 86 3.81E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 Gene3D G3DSA:1.10.10.10 6 94 1.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 Pfam PF03466 LysR substrate binding domain 96 286 3.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 1.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_05315 4cc36d49050b99947df8bdbb7432d049 306 SUPERFAMILY SSF53850 97 285 3.14E-29 T 14-10-2018 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 SUPERFAMILY SSF50104 1 65 5.78E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 PIRSF PIRSF005901 1 188 2.7E-59 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.6E-19 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 SUPERFAMILY SSF50249 132 188 2.4E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Gene3D G3DSA:2.30.30.30 1 65 4.3E-15 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 SMART SM01185 69 124 2.4E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Gene3D G3DSA:2.40.50.140 131 188 1.2E-19 T 14-10-2018 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.0E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Gene3D G3DSA:2.40.50.140 67 130 5.0E-15 T 14-10-2018 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.336 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 SMART SM00841 132 187 6.6E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEJY3_10220 5540e30ff7f0ce6b5bd4527f9a9d8a3e 188 SUPERFAMILY SSF50249 67 129 3.13E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_03095 5b61d93a29661c0fefc51cff56f77cb3 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.951 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VEJY3_03095 5b61d93a29661c0fefc51cff56f77cb3 154 SUPERFAMILY SSF53271 5 147 1.99E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_03095 5b61d93a29661c0fefc51cff56f77cb3 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 1.8E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_03095 5b61d93a29661c0fefc51cff56f77cb3 154 Gene3D G3DSA:3.40.50.2020 1 152 1.2E-41 T 14-10-2018 VEJY3_07780 58bc19e26f1cf202b659dc487d877fd2 148 Gene3D G3DSA:1.10.760.10 2 127 8.8E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07780 58bc19e26f1cf202b659dc487d877fd2 148 SUPERFAMILY SSF46626 18 121 4.8E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07780 58bc19e26f1cf202b659dc487d877fd2 148 Pfam PF00034 Cytochrome c 20 119 3.5E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_03960 ee2bafec45d6cd065eed4bf6df1fe47c 284 Pfam PF00561 alpha/beta hydrolase fold 27 267 2.8E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_03960 ee2bafec45d6cd065eed4bf6df1fe47c 284 SUPERFAMILY SSF53474 2 282 3.38E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03960 ee2bafec45d6cd065eed4bf6df1fe47c 284 Gene3D G3DSA:3.40.50.1820 1 277 3.1E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.146 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 SUPERFAMILY SSF55060 178 294 4.32E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 SUPERFAMILY SSF54211 3 191 1.82E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PIRSF PIRSF000676 1 316 1.2E-79 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 14-10-2018 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 14-10-2018 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 14-10-2018 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 14-10-2018 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 14-10-2018 VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 Gene3D G3DSA:3.30.70.890 174 283 7.5E-89 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEJY3_02235 584e25eef22fddc2637e17341d9812e0 318 Gene3D G3DSA:3.30.230.10 5 173 7.5E-89 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_02695 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC VEJY3_02695 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC VEJY3_02695 b94fb7376bbc82844226b347d4bc02c0 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 3.3E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC VEJY3_02695 b94fb7376bbc82844226b347d4bc02c0 109 SMART SM01323 17 101 2.3E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC VEJY3_02695 b94fb7376bbc82844226b347d4bc02c0 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.0E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 SMART SM00116 225 272 9.5E-10 T 14-10-2018 IPR000644 CBS domain VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 SMART SM00116 161 208 2.8E-6 T 14-10-2018 IPR000644 CBS domain VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 SUPERFAMILY SSF54631 153 269 1.15E-28 T 14-10-2018 VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 613 2.0E-38 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Gene3D G3DSA:2.60.120.10 10 144 8.0E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 SUPERFAMILY SSF51206 12 142 8.9E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Pfam PF00027 Cyclic nucleotide-binding domain 48 117 4.9E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Gene3D G3DSA:3.10.580.10 149 277 3.0E-29 T 14-10-2018 VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Pfam PF03445 Putative nucleotidyltransferase DUF294 298 432 3.8E-41 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Pfam PF00571 CBS domain 154 205 6.5E-7 T 14-10-2018 IPR000644 CBS domain VEJY3_21326 ddc666b22b880e257a7eb5a2f208aa26 620 Pfam PF00571 CBS domain 219 268 1.1E-10 T 14-10-2018 IPR000644 CBS domain VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 PRINTS PR00160 Glutaredoxin signature 157 170 6.3E-6 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 PRINTS PR00160 Glutaredoxin signature 171 184 6.3E-6 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 PRINTS PR00160 Glutaredoxin signature 108 126 6.3E-6 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 SUPERFAMILY SSF52833 109 187 3.4E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 Pfam PF00462 Glutaredoxin 109 174 5.8E-14 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEJY3_22006 cd6d83383896ca0ee95eee8c0e58c3e6 204 Gene3D G3DSA:3.40.30.10 109 185 1.8E-16 T 14-10-2018 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 Gene3D G3DSA:3.30.70.920 54 150 1.5E-19 T 14-10-2018 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 SUPERFAMILY SSF54909 66 147 5.63E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 Gene3D G3DSA:1.10.10.10 4 53 5.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 5.3E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 SMART SM00344 3 112 2.9E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.0E-18 T 14-10-2018 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_17216 7a158aafc6ac28697da19ed1e660776b 159 SUPERFAMILY SSF46785 2 60 1.09E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12515 31cacd4c6be6e421ef96a68b144e013e 238 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 107 203 8.2E-25 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VEJY3_12515 31cacd4c6be6e421ef96a68b144e013e 238 SMART SM00858 37 99 8.1E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEJY3_12515 31cacd4c6be6e421ef96a68b144e013e 238 Pfam PF08666 SAF domain 38 98 1.1E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEJY3_17426 7413e038b44746a940bcc61770aa766f 218 SUPERFAMILY SSF55821 10 213 1.44E-81 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEJY3_17426 7413e038b44746a940bcc61770aa766f 218 Gene3D G3DSA:3.90.870.10 6 218 6.2E-88 T 14-10-2018 VEJY3_17426 7413e038b44746a940bcc61770aa766f 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 3.4E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_17426 7413e038b44746a940bcc61770aa766f 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.152 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_17426 7413e038b44746a940bcc61770aa766f 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.5E-78 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.85 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Gene3D G3DSA:1.20.1180.10 197 262 6.5E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 SUPERFAMILY SSF51161 1 262 3.14E-73 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 PIRSF PIRSF000456 4 262 2.5E-95 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 7.1E-25 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VEJY3_12015 874f8f7d8506fdf360006d5029670d0d 262 Gene3D G3DSA:2.160.10.10 1 196 3.9E-50 T 14-10-2018 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 7.1E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 7.1E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 7.1E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 7.1E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 Gene3D G3DSA:1.20.5.1030 67 123 1.6E-17 T 14-10-2018 IPR038379 SecE superfamily VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.376 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_14795 316ce70a20d6992bfd50b0b678c68438 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 1.6E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEJY3_07205 3ea93c61b692e03c18c01fa83bdcc668 155 Pfam PF11749 Protein of unknown function (DUF3305) 25 145 9.1E-20 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 VEJY3_13830 52ccafdbbf4aaac7f5f076c53faa32a0 153 SUPERFAMILY SSF54523 7 134 6.43E-13 T 14-10-2018 VEJY3_13830 52ccafdbbf4aaac7f5f076c53faa32a0 153 Gene3D G3DSA:3.30.700.10 7 152 8.8E-14 T 14-10-2018 VEJY3_13830 52ccafdbbf4aaac7f5f076c53faa32a0 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_13830 52ccafdbbf4aaac7f5f076c53faa32a0 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_05875 460080c282620f5c359d635551624fbd 400 Pfam PF07690 Major Facilitator Superfamily 24 364 2.3E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_05875 460080c282620f5c359d635551624fbd 400 SUPERFAMILY SSF103473 8 398 2.75E-61 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_05875 460080c282620f5c359d635551624fbd 400 Gene3D G3DSA:1.20.1720.10 17 396 1.7E-98 T 14-10-2018 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 72.546 T 14-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 SUPERFAMILY SSF51395 7 375 1.71E-98 T 14-10-2018 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 PIRSF PIRSF000138 2 380 3.2E-122 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.2E-125 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEJY3_23471 afac88db6bfef8ee56b30cb5679987d1 380 Gene3D G3DSA:3.20.20.70 3 378 1.1E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_06855 5adfb8a7dfe621c4978be159583aeabf 278 Pfam PF00005 ABC transporter 52 206 2.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06855 5adfb8a7dfe621c4978be159583aeabf 278 SMART SM00382 60 253 0.0052 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06855 5adfb8a7dfe621c4978be159583aeabf 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 254 275 9.4E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEJY3_06855 5adfb8a7dfe621c4978be159583aeabf 278 SUPERFAMILY SSF52540 35 275 1.68E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06855 5adfb8a7dfe621c4978be159583aeabf 278 Gene3D G3DSA:3.40.50.300 33 276 2.9E-50 T 14-10-2018 VEJY3_01925 1266607877fb66d6f89961d518fbf014 215 Pfam PF00293 NUDIX domain 59 178 4.4E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_01925 1266607877fb66d6f89961d518fbf014 215 Gene3D G3DSA:3.90.79.10 1 208 1.6E-64 T 14-10-2018 VEJY3_01925 1266607877fb66d6f89961d518fbf014 215 SUPERFAMILY SSF55811 11 206 9.75E-46 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_01925 1266607877fb66d6f89961d518fbf014 215 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 SUPERFAMILY SSF53800 4 319 6.8E-104 T 14-10-2018 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 Gene3D G3DSA:3.40.50.1400 8 320 3.9E-93 T 14-10-2018 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 Gene3D G3DSA:3.40.50.1400 163 301 3.9E-93 T 14-10-2018 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 Pfam PF00762 Ferrochelatase 6 319 6.6E-110 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEJY3_03740 8307657b9f98aee1231f3d24bbac5d81 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.229 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEJY3_09145 12b16b4956aef427ca22423f8139290d 971 Gene3D G3DSA:3.20.20.80 423 965 1.7E-188 T 14-10-2018 VEJY3_09145 12b16b4956aef427ca22423f8139290d 971 SUPERFAMILY SSF51445 614 955 1.56E-25 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_09145 12b16b4956aef427ca22423f8139290d 971 Pfam PF02449 Beta-galactosidase 679 813 3.8E-4 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEJY3_09145 12b16b4956aef427ca22423f8139290d 971 Gene3D G3DSA:2.60.120.430 230 420 3.9E-46 T 14-10-2018 VEJY3_06725 1a32441b3dc6a4471f1962588ac8e32f 309 Gene3D G3DSA:3.20.20.370 1 308 1.4E-107 T 14-10-2018 VEJY3_06725 1a32441b3dc6a4471f1962588ac8e32f 309 SUPERFAMILY SSF88713 5 307 1.45E-89 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEJY3_06725 1a32441b3dc6a4471f1962588ac8e32f 309 Pfam PF01522 Polysaccharide deacetylase 76 163 5.7E-10 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 SUPERFAMILY SSF47729 1 91 4.86E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 Gene3D G3DSA:4.10.520.10 2 39 5.4E-12 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 Gene3D G3DSA:4.10.520.10 40 92 2.3E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.2E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.253 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 SMART SM00411 1 91 2.8E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_10555 161fe76118a85beeb1f58855e4f8eb65 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 Gene3D G3DSA:3.90.1150.10 4 416 5.1E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 Gene3D G3DSA:3.40.640.10 58 317 5.1E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 SUPERFAMILY SSF53383 20 422 2.48E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 PIRSF PIRSF000521 1 128 3.4E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 PIRSF PIRSF000521 121 422 7.3E-43 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 Pfam PF00202 Aminotransferase class-III 23 419 2.4E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_21556 e959de6c0cb7c117267af8b3fa93aafa 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 Pfam PF00571 CBS domain 6 61 3.6E-7 T 14-10-2018 IPR000644 CBS domain VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 Pfam PF00571 CBS domain 73 127 1.5E-13 T 14-10-2018 IPR000644 CBS domain VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 SUPERFAMILY SSF54631 1 127 6.95E-32 T 14-10-2018 VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 Gene3D G3DSA:3.10.580.10 1 128 8.3E-31 T 14-10-2018 VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 SMART SM00116 13 61 0.57 T 14-10-2018 IPR000644 CBS domain VEJY3_04440 04502eecd7eddd30fe68bc7b3201b466 139 SMART SM00116 80 128 6.4E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_10150 5510c59ff3a2c77e850338f48a28f1e3 330 Gene3D G3DSA:3.40.50.720 1 328 5.3E-72 T 14-10-2018 VEJY3_10150 5510c59ff3a2c77e850338f48a28f1e3 330 SUPERFAMILY SSF51735 2 325 6.67E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10150 5510c59ff3a2c77e850338f48a28f1e3 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 232 1.5E-26 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEJY3_22856 06b4b7008242c054132034fe44a98ad8 249 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 237 9.1E-32 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 VEJY3_22856 06b4b7008242c054132034fe44a98ad8 249 SUPERFAMILY SSF51621 9 244 2.16E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_22856 06b4b7008242c054132034fe44a98ad8 249 Gene3D G3DSA:3.20.20.60 1 249 1.7E-69 T 14-10-2018 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 302 320 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 410 430 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 183 201 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 349 371 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 91 113 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 PRINTS PR00175 Sodium/alanine symporter signature 211 230 3.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_20481 0ece499a81a71c4becb44e80fe17b5e2 475 Pfam PF01235 Sodium:alanine symporter family 52 454 7.4E-137 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 SMART SM00382 42 229 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 Pfam PF03459 TOBE domain 312 375 1.4E-12 T 14-10-2018 IPR005116 Transport-associated OB, type 1 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 Pfam PF00005 ABC transporter 37 179 2.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 Gene3D G3DSA:2.40.50.100 310 377 1.3E-13 T 14-10-2018 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 SUPERFAMILY SSF52540 25 243 5.58E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 Gene3D G3DSA:3.40.50.300 24 256 1.2E-58 T 14-10-2018 VEJY3_18781 4cfc7559cbd6eba314ec74368aae03b1 377 SUPERFAMILY SSF50331 268 376 3.4E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.855 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 Pfam PF03023 MviN-like protein 30 483 7.7E-145 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.0E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02400 e8ce70073939e1018efd7b36c8601ce0 520 PIRSF PIRSF002869 1 517 5.4E-149 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEJY3_02650 25e0b591662088af45ee4abafa1b50fd 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.142 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEJY3_02650 25e0b591662088af45ee4abafa1b50fd 247 Pfam PF03932 CutC family 4 204 4.7E-81 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEJY3_02650 25e0b591662088af45ee4abafa1b50fd 247 Gene3D G3DSA:3.20.20.380 3 247 1.2E-84 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEJY3_02650 25e0b591662088af45ee4abafa1b50fd 247 SUPERFAMILY SSF110395 4 247 4.58E-72 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEJY3_08245 63da3d2cd72a82d50b68eab9f93b0573 118 Gene3D G3DSA:3.90.1150.30 1 116 2.2E-41 T 14-10-2018 IPR038056 YjbR-like superfamily VEJY3_08245 63da3d2cd72a82d50b68eab9f93b0573 118 Pfam PF04237 YjbR 15 102 8.0E-25 T 14-10-2018 IPR007351 Uncharacterised protein YjbR VEJY3_08245 63da3d2cd72a82d50b68eab9f93b0573 118 SUPERFAMILY SSF142906 1 116 1.57E-37 T 14-10-2018 IPR038056 YjbR-like superfamily VEJY3_11920 d13eef8be8a08b0c09032b959ecb33d1 281 Gene3D G3DSA:3.60.20.10 1 258 1.6E-98 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_11920 d13eef8be8a08b0c09032b959ecb33d1 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 9.9E-113 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VEJY3_11920 d13eef8be8a08b0c09032b959ecb33d1 281 SUPERFAMILY SSF56235 2 253 4.34E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 SUPERFAMILY SSF53850 95 301 2.71E-39 T 14-10-2018 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 Gene3D G3DSA:3.40.190.10 169 270 6.0E-59 T 14-10-2018 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 Pfam PF03466 LysR substrate binding domain 94 301 3.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 Gene3D G3DSA:3.40.190.10 98 298 6.0E-59 T 14-10-2018 VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 SUPERFAMILY SSF46785 11 90 6.6E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 Gene3D G3DSA:1.10.10.10 9 97 4.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23556 44ac346b195016b4d5847b08e3426392 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 SUPERFAMILY SSF63562 1 78 7.59E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.353 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 7.1E-28 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.7E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 SMART SM01409 8 61 2.1E-14 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEJY3_00745 30b681223c0056c6c1b5269f2d606e88 90 Gene3D G3DSA:3.90.940.10 1 90 2.7E-29 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEJY3_12835 ce0c892b73728f953892b7da93503243 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_12835 ce0c892b73728f953892b7da93503243 331 Gene3D G3DSA:3.40.50.300 8 331 2.7E-78 T 14-10-2018 VEJY3_12835 ce0c892b73728f953892b7da93503243 331 SUPERFAMILY SSF52540 9 262 8.96E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12835 ce0c892b73728f953892b7da93503243 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_12835 ce0c892b73728f953892b7da93503243 331 SMART SM00382 43 241 4.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12835 ce0c892b73728f953892b7da93503243 331 Pfam PF00005 ABC transporter 35 192 2.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07720 dc8f6dc33b3da94d4633b0613067939d 109 SUPERFAMILY SSF69721 2 109 3.4E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily VEJY3_07720 dc8f6dc33b3da94d4633b0613067939d 109 PIRSF PIRSF006223 2 109 3.9E-40 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VEJY3_07720 dc8f6dc33b3da94d4633b0613067939d 109 Gene3D G3DSA:3.30.1420.10 2 38 2.4E-12 T 14-10-2018 VEJY3_07720 dc8f6dc33b3da94d4633b0613067939d 109 Gene3D G3DSA:1.10.10.370 39 109 1.4E-30 T 14-10-2018 VEJY3_07720 dc8f6dc33b3da94d4633b0613067939d 109 Pfam PF04358 DsrC like protein 4 109 7.5E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 Gene3D G3DSA:1.10.150.240 19 89 2.6E-36 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 Gene3D G3DSA:3.40.50.1000 6 193 2.6E-36 T 14-10-2018 IPR023214 HAD superfamily VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 SUPERFAMILY SSF56784 7 198 4.06E-31 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 89 186 1.8E-10 T 14-10-2018 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 3.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 3.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 3.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 3.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_08355 23db88e654bac59720d8fbf393df2577 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 186 1.7E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 SUPERFAMILY SSF51905 2 452 5.24E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 3.8E-7 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.2E-6 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 5.2E-6 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 1.6E-46 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 SUPERFAMILY SSF54862 454 553 2.99E-28 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 SUPERFAMILY SSF54373 213 310 3.92E-31 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 Gene3D G3DSA:3.30.9.90 80 454 1.0E-182 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 Gene3D G3DSA:3.30.70.20 455 548 1.2E-34 T 14-10-2018 VEJY3_20341 8e5f32e8d781472a870f8755789afdbd 553 Gene3D G3DSA:3.50.50.60 7 386 1.0E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_02985 bc359c04716e2faf05fc782fb9ede71d 294 Pfam PF01513 ATP-NAD kinase 8 273 1.4E-71 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEJY3_02985 bc359c04716e2faf05fc782fb9ede71d 294 SUPERFAMILY SSF111331 8 290 1.83E-93 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VEJY3_02985 bc359c04716e2faf05fc782fb9ede71d 294 Gene3D G3DSA:3.40.50.10330 23 289 7.3E-94 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VEJY3_02985 bc359c04716e2faf05fc782fb9ede71d 294 Gene3D G3DSA:2.60.200.30 129 266 7.3E-94 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEJY3_02985 bc359c04716e2faf05fc782fb9ede71d 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.598 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 Gene3D G3DSA:3.30.300.160 1 78 2.4E-38 T 14-10-2018 VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 Gene3D G3DSA:3.40.50.300 226 500 1.1E-124 T 14-10-2018 VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 Pfam PF00437 Type II/IV secretion system protein 127 392 3.7E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 SUPERFAMILY SSF160246 12 78 6.28E-17 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 Gene3D G3DSA:3.30.450.90 88 225 9.7E-56 T 14-10-2018 VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 SUPERFAMILY SSF52540 107 497 3.46E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00615 bbba1acaba16bd7693baa2d057490791 500 SMART SM00382 253 376 6.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00360 71635b18f6b7af1de43acd2d8c9677d6 433 Pfam PF00437 Type II/IV secretion system protein 84 359 5.5E-85 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_00360 71635b18f6b7af1de43acd2d8c9677d6 433 SUPERFAMILY SSF52540 67 366 8.07E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00360 71635b18f6b7af1de43acd2d8c9677d6 433 Gene3D G3DSA:3.40.50.300 180 432 2.3E-74 T 14-10-2018 VEJY3_00360 71635b18f6b7af1de43acd2d8c9677d6 433 Gene3D G3DSA:3.30.450.380 6 177 4.8E-39 T 14-10-2018 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 SMART SM00354 7 77 1.4E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 Gene3D G3DSA:3.40.50.2300 158 333 3.2E-42 T 14-10-2018 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 Gene3D G3DSA:3.40.50.2300 65 155 2.0E-11 T 14-10-2018 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 9.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 SUPERFAMILY SSF47413 7 65 8.23E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 Pfam PF13377 Periplasmic binding protein-like domain 174 333 2.6E-27 T 14-10-2018 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 Gene3D G3DSA:1.10.260.40 1 64 4.1E-23 T 14-10-2018 VEJY3_22761 80562d30feddc06538063ffcf5baac30 334 SUPERFAMILY SSF53822 65 327 9.42E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_04340 bdbdc9695242c22da81a6f27b77985dd 286 SUPERFAMILY SSF54637 116 283 7.69E-61 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_04340 bdbdc9695242c22da81a6f27b77985dd 286 Pfam PF13622 Thioesterase-like superfamily 33 282 6.3E-62 T 14-10-2018 VEJY3_04340 bdbdc9695242c22da81a6f27b77985dd 286 SUPERFAMILY SSF54637 6 114 6.51E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_04340 bdbdc9695242c22da81a6f27b77985dd 286 Gene3D G3DSA:3.10.129.90 2 286 9.2E-109 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 Gene3D G3DSA:3.40.50.720 393 637 6.3E-64 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 393 645 9.4E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 Gene3D G3DSA:3.50.50.60 488 617 6.3E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 Gene3D G3DSA:3.20.20.70 1 382 1.3E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 394 413 6.2E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 476 494 6.2E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 609 625 6.2E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 SUPERFAMILY SSF51395 4 373 7.33E-101 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 415 2.5E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 661 668 2.5E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 610 624 2.5E-8 T 14-10-2018 VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 SUPERFAMILY SSF51905 382 685 2.2E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21686 fd46ffc1bb52a153e1b0cfc53f3ac1aa 687 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 1.4E-65 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_10520 71c83528e8b1246842ba7dc51f45cee7 249 Pfam PF00535 Glycosyl transferase family 2 6 116 2.8E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_10520 71c83528e8b1246842ba7dc51f45cee7 249 Gene3D G3DSA:3.90.550.10 2 234 2.3E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_10520 71c83528e8b1246842ba7dc51f45cee7 249 SUPERFAMILY SSF53448 1 228 3.45E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_16801 56613916fbae4f80a741a5bf116f402c 462 SUPERFAMILY SSF56935 57 462 1.01E-106 T 14-10-2018 VEJY3_16801 56613916fbae4f80a741a5bf116f402c 462 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 9.5E-12 T 14-10-2018 IPR021570 LamB-type porin N-terminal domain VEJY3_16801 56613916fbae4f80a741a5bf116f402c 462 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 63 458 7.0E-114 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_16801 56613916fbae4f80a741a5bf116f402c 462 Gene3D G3DSA:2.40.170.10 55 462 3.6E-144 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEJY3_16801 56613916fbae4f80a741a5bf116f402c 462 Pfam PF02264 LamB porin 59 462 6.4E-97 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_21871 a4a7eed642b14e6aa4bdda88d6806197 411 Pfam PF12704 MacB-like periplasmic core domain 18 223 2.7E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_21871 a4a7eed642b14e6aa4bdda88d6806197 411 Pfam PF02687 FtsX-like permease family 299 403 8.0E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_14900 205ea55ed3dc3eec6e8162abbd191f2b 183 Gene3D G3DSA:3.40.1410.10 13 178 2.4E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_14900 205ea55ed3dc3eec6e8162abbd191f2b 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.12 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VEJY3_14900 205ea55ed3dc3eec6e8162abbd191f2b 183 SUPERFAMILY SSF64288 11 178 1.88E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_14900 205ea55ed3dc3eec6e8162abbd191f2b 183 Pfam PF04345 Chorismate lyase 18 183 1.4E-55 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VEJY3_16376 6390beb2564fe19fcf61ca78e03e33b6 414 Gene3D G3DSA:3.30.70.270 229 397 2.3E-48 T 14-10-2018 VEJY3_16376 6390beb2564fe19fcf61ca78e03e33b6 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 388 1.8E-38 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16376 6390beb2564fe19fcf61ca78e03e33b6 414 SMART SM00267 223 392 1.1E-48 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16376 6390beb2564fe19fcf61ca78e03e33b6 414 SUPERFAMILY SSF55073 239 393 5.18E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_21786 4c239253feafc8c536b3ccfa9373678c 114 Pfam PF08888 HopJ type III effector protein 3 111 1.4E-49 T 14-10-2018 IPR014984 HopJ type III effector protein VEJY3_21786 4c239253feafc8c536b3ccfa9373678c 114 Gene3D G3DSA:3.20.160.10 1 114 2.0E-52 T 14-10-2018 IPR038604 Type III effector HopJ superfamily VEJY3_02835 45915e0d660772ab251d0eeba4536a79 326 SUPERFAMILY SSF56784 61 310 1.54E-22 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_02835 45915e0d660772ab251d0eeba4536a79 326 Gene3D G3DSA:3.40.50.1000 110 312 1.9E-38 T 14-10-2018 IPR023214 HAD superfamily VEJY3_02835 45915e0d660772ab251d0eeba4536a79 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 264 1.5E-16 T 14-10-2018 VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 9.8E-109 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 SUPERFAMILY SSF54211 3 126 2.2E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 SUPERFAMILY SSF54211 134 278 4.63E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 Gene3D G3DSA:3.30.1700.10 129 305 4.3E-71 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 Gene3D G3DSA:3.30.230.20 1 128 1.4E-51 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEJY3_02105 6ea2e4c35ff3669301a1038eee85cb59 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.838 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 SUPERFAMILY SSF53067 85 391 1.84E-55 T 14-10-2018 VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 Gene3D G3DSA:3.30.420.40 90 384 7.1E-94 T 14-10-2018 VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 Pfam PF00480 ROK family 86 390 1.6E-76 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_03765 8929fe89fa73719f43e0e912f48181d1 404 Gene3D G3DSA:3.30.420.40 207 376 7.1E-94 T 14-10-2018 VEJY3_16771 9f206c3c7a19fcfd0051d5bb6bf6741a 176 Pfam PF04170 NlpE N-terminal domain 81 165 2.4E-31 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE VEJY3_16771 9f206c3c7a19fcfd0051d5bb6bf6741a 176 Gene3D G3DSA:2.40.128.640 68 176 2.6E-41 T 14-10-2018 VEJY3_12160 a595cd4066e48ced961c36f7f46d526f 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 1.0E-21 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEJY3_12160 a595cd4066e48ced961c36f7f46d526f 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 28.963 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEJY3_12160 a595cd4066e48ced961c36f7f46d526f 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 9.2E-36 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 Gene3D G3DSA:3.55.40.10 33 199 3.0E-43 T 14-10-2018 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 Pfam PF12019 Type II transport protein GspH 42 180 7.3E-9 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 SUPERFAMILY SSF54523 7 113 6.91E-9 T 14-10-2018 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 8.0E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 8.0E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEJY3_00630 4bc438dea0419b3a36abf3eba8b5ced2 199 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 8.0E-19 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 Gene3D G3DSA:3.40.930.10 501 646 9.4E-51 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 Pfam PF02378 Phosphotransferase system, EIIC 18 278 1.9E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 643 1.0E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 SUPERFAMILY SSF52794 385 472 4.32E-25 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 SUPERFAMILY SSF55804 505 643 1.19E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 Gene3D G3DSA:3.40.50.2300 372 475 9.4E-36 T 14-10-2018 VEJY3_01770 adc103141f652a37aa61c46e16618e65 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 3.5E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 3.1E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 Gene3D G3DSA:1.20.1740.10 3 399 1.5E-10 T 14-10-2018 VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VEJY3_06930 2a89c3fdd2ffa59d983915d37ea13922 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 380 2.0E-107 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEJY3_23376 c14dc5392a5c9e4dff808577672e5ecb 236 SUPERFAMILY SSF53167 3 234 9.16E-92 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEJY3_23376 c14dc5392a5c9e4dff808577672e5ecb 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.765 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEJY3_23376 c14dc5392a5c9e4dff808577672e5ecb 236 Pfam PF01048 Phosphorylase superfamily 17 222 1.8E-34 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEJY3_23376 c14dc5392a5c9e4dff808577672e5ecb 236 Gene3D G3DSA:3.40.50.1580 1 236 6.0E-76 T 14-10-2018 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 Gene3D G3DSA:3.90.1150.10 31 438 6.6E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 SUPERFAMILY SSF53383 18 444 6.68E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 Gene3D G3DSA:3.40.640.10 67 349 6.6E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 PIRSF PIRSF000521 23 145 0.024 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 PIRSF PIRSF000521 195 445 2.3E-13 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 Pfam PF00202 Aminotransferase class-III 29 441 6.0E-86 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_23911 2077dfb3edff6074ce22e8c299e87ca5 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Gene3D G3DSA:2.150.10.10 2 62 2.6E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Gene3D G3DSA:2.150.10.10 63 187 1.4E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 PRINTS PR00313 NodO calcium binding signature 106 115 2.5E-12 T 14-10-2018 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 PRINTS PR00313 NodO calcium binding signature 70 78 2.5E-12 T 14-10-2018 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 PRINTS PR00313 NodO calcium binding signature 40 51 2.5E-12 T 14-10-2018 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 PRINTS PR00313 NodO calcium binding signature 52 60 2.5E-12 T 14-10-2018 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 SUPERFAMILY SSF51120 11 75 3.27E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.84 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 0.34 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 3.6E-5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 112 0.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 SUPERFAMILY SSF51120 56 180 1.28E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEJY3_23271 be690abf4ee05a615c67423df7b4a4ec 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.84 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 144 173 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 180 202 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 405 421 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 264 280 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 295 311 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 239 257 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PRINTS PR00072 Malic enzyme signature 84 108 1.2E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 SMART SM00919 268 528 1.1E-134 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 Gene3D G3DSA:3.40.50.720 266 562 9.5E-110 T 14-10-2018 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.4E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 SUPERFAMILY SSF53223 4 267 1.51E-109 T 14-10-2018 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 Gene3D G3DSA:3.40.50.10380 13 265 1.7E-115 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 SUPERFAMILY SSF51735 268 559 1.2E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 SMART SM01274 78 258 2.8E-108 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 PIRSF PIRSF000106 2 560 2.5E-225 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEJY3_06070 2d3006edda22d10ddd3cc1e418ade8a0 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.4E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEJY3_18406 afa3e8d1a9693aa551168daa1188fcb5 650 SUPERFAMILY SSF56801 13 606 1.57E-99 T 14-10-2018 VEJY3_18406 afa3e8d1a9693aa551168daa1188fcb5 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_18406 afa3e8d1a9693aa551168daa1188fcb5 650 Pfam PF00501 AMP-binding enzyme 21 471 1.0E-75 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_18406 afa3e8d1a9693aa551168daa1188fcb5 650 Gene3D G3DSA:3.40.50.12780 8 311 1.5E-38 T 14-10-2018 VEJY3_18406 afa3e8d1a9693aa551168daa1188fcb5 650 Gene3D G3DSA:3.40.50.12780 328 467 4.6E-33 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.2E-31 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-31 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 1.2E-31 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.2E-31 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 Gene3D G3DSA:3.40.50.720 1 333 1.6E-101 T 14-10-2018 VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 4.4E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_01085 fedf4ea0a751e797b506e1acf3d5e3ef 333 SUPERFAMILY SSF51735 1 332 2.09E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10680 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_10680 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEJY3_10680 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VEJY3_10680 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_10680 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VEJY3_13495 41a741b350468243074cd5f6df3e64df 306 SUPERFAMILY SSF56601 4 306 2.05E-115 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_13495 41a741b350468243074cd5f6df3e64df 306 Pfam PF04960 Glutaminase 22 306 1.2E-113 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VEJY3_13495 41a741b350468243074cd5f6df3e64df 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.656 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VEJY3_13495 41a741b350468243074cd5f6df3e64df 306 Gene3D G3DSA:3.40.710.10 2 306 1.6E-110 T 14-10-2018 VEJY3_18911 914763089cd382fde55c4260a4f7ba17 178 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEJY3_18911 914763089cd382fde55c4260a4f7ba17 178 SUPERFAMILY SSF52218 1 176 2.17E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_18911 914763089cd382fde55c4260a4f7ba17 178 Pfam PF00258 Flavodoxin 6 168 3.5E-29 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_18911 914763089cd382fde55c4260a4f7ba17 178 Gene3D G3DSA:3.40.50.360 1 178 9.1E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_18911 914763089cd382fde55c4260a4f7ba17 178 PIRSF PIRSF038996 1 178 5.8E-61 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 Pfam PF03466 LysR substrate binding domain 95 260 3.1E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 Gene3D G3DSA:3.40.190.290 94 298 9.3E-19 T 14-10-2018 VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 SUPERFAMILY SSF46785 4 80 8.77E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 SUPERFAMILY SSF53850 95 280 2.71E-15 T 14-10-2018 VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_22676 ec28e4eb188fbb87c83103470a35a59c 302 Gene3D G3DSA:1.10.10.10 1 85 5.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 SMART SM00382 375 594 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 Pfam PF00005 ABC transporter 369 512 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 SUPERFAMILY SSF90123 5 333 2.09E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 Gene3D G3DSA:3.40.50.300 344 593 2.1E-63 T 14-10-2018 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 Pfam PF00664 ABC transporter transmembrane region 24 292 3.4E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 Gene3D G3DSA:1.20.1560.10 1 334 5.2E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_06035 961a0b87867402eae12ec9c46d54d20a 595 SUPERFAMILY SSF52540 346 581 5.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 SUPERFAMILY SSF55021 79 162 1.41E-26 T 14-10-2018 VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 SUPERFAMILY SSF55021 1 75 1.69E-22 T 14-10-2018 VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 Gene3D G3DSA:3.30.70.1150 80 157 2.5E-27 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 Pfam PF13710 ACT domain 11 73 1.9E-17 T 14-10-2018 VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 1.0E-36 T 14-10-2018 VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 Gene3D G3DSA:3.30.70.260 1 78 1.4E-33 T 14-10-2018 VEJY3_01725 e75cd2ec70447ebb9461c2bfb8c65c15 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 3.3E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VEJY3_23606 6d91c0139b25e7c886aa5a91faeb8874 295 Gene3D G3DSA:2.40.50.100 42 120 2.1E-12 T 14-10-2018 VEJY3_23606 6d91c0139b25e7c886aa5a91faeb8874 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 230 1.7E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_23606 6d91c0139b25e7c886aa5a91faeb8874 295 Gene3D G3DSA:2.40.30.170 170 294 7.3E-27 T 14-10-2018 VEJY3_23606 6d91c0139b25e7c886aa5a91faeb8874 295 SUPERFAMILY SSF111369 42 242 4.71E-22 T 14-10-2018 VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 SUPERFAMILY SSF52540 3 237 2.96E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 SMART SM00382 28 231 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.8E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 Pfam PF00005 ABC transporter 20 166 5.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 Gene3D G3DSA:3.40.50.300 2 241 1.2E-71 T 14-10-2018 VEJY3_13690 acacc59f5be8f46589c3af2cab7bebf0 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_15200 79ccbb76809b42cf134e6ddb3b2b4e9e 151 Pfam PF07681 DoxX 27 108 7.9E-18 T 14-10-2018 IPR032808 DoxX family VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Gene3D G3DSA:1.10.10.10 6 98 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 SUPERFAMILY SSF46785 2 83 1.27E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Gene3D G3DSA:1.10.10.10 105 193 8.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Gene3D G3DSA:3.40.190.10 197 384 1.2E-46 T 14-10-2018 VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 SUPERFAMILY SSF53850 196 398 3.19E-33 T 14-10-2018 VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 109 165 5.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Gene3D G3DSA:3.40.190.10 270 372 1.2E-46 T 14-10-2018 VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 Pfam PF03466 LysR substrate binding domain 193 398 5.7E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18051 1b0b00fcc8450bea2cc51e5d0e1ed11a 405 SUPERFAMILY SSF46785 105 190 1.36E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_15435 0877beac39c4548db53a1ff09a51d0a4 286 Gene3D G3DSA:1.10.3720.10 73 282 9.4E-55 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_15435 0877beac39c4548db53a1ff09a51d0a4 286 SUPERFAMILY SSF161098 81 267 1.57E-45 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_15435 0877beac39c4548db53a1ff09a51d0a4 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 282 4.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_08020 66b351f5d183c05ca5b6a0786a2353ed 227 Gene3D G3DSA:1.20.910.10 3 226 2.7E-57 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEJY3_08020 66b351f5d183c05ca5b6a0786a2353ed 227 Pfam PF14518 Iron-containing redox enzyme 40 210 2.1E-25 T 14-10-2018 VEJY3_08020 66b351f5d183c05ca5b6a0786a2353ed 227 SMART SM01236 74 175 1.4E-7 T 14-10-2018 VEJY3_08020 66b351f5d183c05ca5b6a0786a2353ed 227 SUPERFAMILY SSF48613 3 219 4.59E-57 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 Gene3D G3DSA:1.10.230.10 268 376 1.2E-151 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VEJY3_03830 e44abe66799181574dd6fde96b159937 429 Gene3D G3DSA:2.20.28.60 1 50 6.2E-27 T 14-10-2018 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 SUPERFAMILY SSF48256 4 428 2.22E-170 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 Gene3D G3DSA:1.10.580.10 57 411 1.2E-151 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 241 269 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 296 316 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 219 234 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 165 178 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 359 375 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PRINTS PR00143 Citrate synthase signature 379 393 2.5E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEJY3_03830 e44abe66799181574dd6fde96b159937 429 PIRSF PIRSF001369 38 429 1.3E-175 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VEJY3_03830 e44abe66799181574dd6fde96b159937 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.2E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VEJY3_08415 3f16005225e9c433e491081ef8a7355d 79 SUPERFAMILY SSF54928 2 78 3.9E-26 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VEJY3_08415 3f16005225e9c433e491081ef8a7355d 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 9.8E-22 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VEJY3_08415 3f16005225e9c433e491081ef8a7355d 79 SMART SM00360 2 75 5.3E-24 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VEJY3_08415 3f16005225e9c433e491081ef8a7355d 79 Gene3D G3DSA:3.30.70.330 1 79 1.3E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Pfam PF04851 Type III restriction enzyme, res subunit 269 435 5.7E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Pfam PF00271 Helicase conserved C-terminal domain 575 658 1.6E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Pfam PF13091 PLD-like domain 32 178 3.8E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Gene3D G3DSA:3.30.870.10 2 206 3.0E-9 T 14-10-2018 VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 SMART SM00490 578 659 2.3E-10 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Gene3D G3DSA:3.40.50.300 466 685 1.4E-36 T 14-10-2018 VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 SMART SM00487 267 459 3.3E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 Gene3D G3DSA:3.40.50.300 262 452 3.4E-26 T 14-10-2018 VEJY3_05185 08e52f8640489531e471b1ed2daa394e 717 SUPERFAMILY SSF52540 322 671 5.33E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01140 43c964c25eeb29b2d43bda143cf360b0 284 Pfam PF00535 Glycosyl transferase family 2 3 104 3.7E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_01140 43c964c25eeb29b2d43bda143cf360b0 284 Gene3D G3DSA:3.90.550.10 1 235 2.6E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01140 43c964c25eeb29b2d43bda143cf360b0 284 SUPERFAMILY SSF53448 1 224 5.81E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_09290 a9f62099618ce0471cefaa65cd6fd2e0 94 SUPERFAMILY SSF46689 7 92 2.33E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09290 a9f62099618ce0471cefaa65cd6fd2e0 94 Pfam PF01527 Transposase 5 73 2.3E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VEJY3_20676 de0088ec0158d411e410537e98401116 179 Gene3D G3DSA:3.40.30.10 2 162 3.6E-21 T 14-10-2018 VEJY3_20676 de0088ec0158d411e410537e98401116 179 Pfam PF00578 AhpC/TSA family 10 139 1.5E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_20676 de0088ec0158d411e410537e98401116 179 SUPERFAMILY SSF52833 7 176 6.55E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_20361 cbf52912d2b631573712f594be05adef 157 Gene3D G3DSA:3.30.450.150 1 156 8.8E-51 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_20361 cbf52912d2b631573712f594be05adef 157 SUPERFAMILY SSF143744 13 152 1.44E-26 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_20361 cbf52912d2b631573712f594be05adef 157 Pfam PF03928 Haem-degrading 21 147 6.5E-32 T 14-10-2018 IPR005624 Haem-degrading VEJY3_20361 cbf52912d2b631573712f594be05adef 157 PIRSF PIRSF008757 1 157 5.2E-53 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 VEJY3_17791 83a587546a9a48546ab027e6546876d3 302 Gene3D G3DSA:3.20.20.100 1 302 9.1E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_17791 83a587546a9a48546ab027e6546876d3 302 Pfam PF00248 Aldo/keto reductase family 17 291 1.3E-58 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_17791 83a587546a9a48546ab027e6546876d3 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.5E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_17791 83a587546a9a48546ab027e6546876d3 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.5E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_17791 83a587546a9a48546ab027e6546876d3 302 SUPERFAMILY SSF51430 6 293 2.88E-69 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_05000 9316fc78468ad7ce0eaf64631367dd25 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 9.9E-35 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEJY3_05000 9316fc78468ad7ce0eaf64631367dd25 203 SUPERFAMILY SSF101327 15 189 9.15E-30 T 14-10-2018 IPR036255 YgfB-like superfamily VEJY3_00735 d413edf560694501a441c92f5a1b9a68 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 6.7E-25 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VEJY3_00735 d413edf560694501a441c92f5a1b9a68 227 Gene3D G3DSA:3.40.1280.10 1 204 1.6E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_00735 d413edf560694501a441c92f5a1b9a68 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 35.095 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 VEJY3_00735 d413edf560694501a441c92f5a1b9a68 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.3E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEJY3_00735 d413edf560694501a441c92f5a1b9a68 227 SUPERFAMILY SSF75217 4 173 8.9E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 SUPERFAMILY SSF51351 2 250 8.38E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.456 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 Gene3D G3DSA:3.20.20.70 1 256 6.7E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.1E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_01195 70350ef565dc85d354e7574f3af671d6 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.1E-78 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 Gene3D G3DSA:3.40.50.2300 158 325 8.5E-45 T 14-10-2018 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 SUPERFAMILY SSF53822 77 328 2.55E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 Gene3D G3DSA:3.40.50.2300 79 319 8.5E-45 T 14-10-2018 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 Pfam PF13377 Periplasmic binding protein-like domain 173 327 1.0E-30 T 14-10-2018 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 SMART SM00354 1 74 4.7E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 Gene3D G3DSA:1.10.260.40 2 60 4.5E-17 T 14-10-2018 VEJY3_12435 7a8db6f80806fa9cbe23966fee3f0d92 330 SUPERFAMILY SSF47413 3 50 3.24E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09045 22155fb7b543c35ff79a0e60da560f2e 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 2.8E-92 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_09045 22155fb7b543c35ff79a0e60da560f2e 365 Gene3D G3DSA:3.20.20.70 1 365 5.4E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_09045 22155fb7b543c35ff79a0e60da560f2e 365 SUPERFAMILY SSF51395 3 364 3.95E-126 T 14-10-2018 VEJY3_03720 ab78ba57d24be86a33d8d80372c788bb 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 2.0E-89 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VEJY3_03720 ab78ba57d24be86a33d8d80372c788bb 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 1.1E-69 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 PIRSF PIRSF036492 7 494 5.9E-154 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 Gene3D G3DSA:3.40.605.10 38 456 6.3E-146 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 Pfam PF00171 Aldehyde dehydrogenase family 35 456 2.1E-86 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 Gene3D G3DSA:3.40.309.10 238 436 6.3E-146 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_04830 a7f637c5451602318eb6ec01e8c79f33 496 SUPERFAMILY SSF53720 25 481 5.89E-111 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 Gene3D G3DSA:3.30.2300.20 80 177 2.3E-39 T 14-10-2018 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 PIRSF PIRSF028774 1 362 2.0E-191 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 Gene3D G3DSA:3.40.50.150 178 358 4.3E-52 T 14-10-2018 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 Gene3D G3DSA:3.30.70.2810 1 78 5.2E-33 T 14-10-2018 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 SUPERFAMILY SSF53335 186 298 1.56E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.94 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VEJY3_03205 9ad59e9c922ad9923a79c7f458286c9c 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.6E-5 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VEJY3_18646 8ad45aa07843d2143751a30f8a4e74da 287 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 2.9E-30 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 PIRSF PIRSF000521 5 465 4.3E-39 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 Gene3D G3DSA:3.90.1150.10 24 462 1.9E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 Gene3D G3DSA:3.40.640.10 79 354 1.9E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 SUPERFAMILY SSF53383 19 464 1.18E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_24191 6bf74fee3100b6282fad030aea5ccac4 471 Pfam PF00202 Aminotransferase class-III 41 461 5.0E-98 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_18366 ac85796bbf5b4f8ca8a516979e0c6dd9 350 SMART SM00849 81 258 4.7E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_18366 ac85796bbf5b4f8ca8a516979e0c6dd9 350 Gene3D G3DSA:3.60.15.10 66 284 1.0E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_18366 ac85796bbf5b4f8ca8a516979e0c6dd9 350 Pfam PF00753 Metallo-beta-lactamase superfamily 85 230 2.0E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_18366 ac85796bbf5b4f8ca8a516979e0c6dd9 350 SUPERFAMILY SSF56281 62 303 1.31E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 Pfam PF01553 Acyltransferase 435 563 1.5E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 SUPERFAMILY SSF69593 385 598 2.35E-29 T 14-10-2018 VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 Pfam PF07690 Major Facilitator Superfamily 15 377 8.8E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 SMART SM00563 450 566 7.2E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 Gene3D G3DSA:1.20.1250.20 6 415 1.1E-19 T 14-10-2018 VEJY3_17436 bbebf7df508372c2217c7ec7cb245471 620 SUPERFAMILY SSF103473 5 420 1.74E-22 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_07220 875f269d54ec98b92b01e7e1a07ffd63 208 SUPERFAMILY SSF89155 4 189 1.57E-52 T 14-10-2018 IPR036411 TorD-like superfamily VEJY3_07220 875f269d54ec98b92b01e7e1a07ffd63 208 Gene3D G3DSA:1.10.3480.10 2 194 2.8E-40 T 14-10-2018 VEJY3_07220 875f269d54ec98b92b01e7e1a07ffd63 208 Pfam PF02613 Nitrate reductase delta subunit 42 156 1.6E-29 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VEJY3_01065 4d9495de79f688f13a4090d34e7635f6 335 Pfam PF02397 Bacterial sugar transferase 148 330 1.3E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase VEJY3_23086 48861d0637bd019f2f0842a7d4bed020 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 2.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_23086 48861d0637bd019f2f0842a7d4bed020 296 SUPERFAMILY SSF161098 10 296 1.7E-69 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23086 48861d0637bd019f2f0842a7d4bed020 296 Gene3D G3DSA:1.10.3720.10 1 283 2.0E-74 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_14970 5a994cba50b5a72b7f413bdfb936e224 109 Gene3D G3DSA:2.40.50.660 32 109 3.0E-7 T 14-10-2018 VEJY3_14970 5a994cba50b5a72b7f413bdfb936e224 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 2.6E-25 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Gene3D G3DSA:3.30.450.20 199 310 5.3E-22 T 14-10-2018 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 536 7.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Pfam PF00989 PAS fold 216 281 1.0E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SUPERFAMILY SSF55890 322 390 2.22E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Pfam PF17203 Single cache domain 3 37 168 2.9E-20 T 14-10-2018 IPR033463 Single cache domain 3 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SUPERFAMILY SSF103190 40 169 3.18E-37 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Gene3D G3DSA:3.30.450.20 33 164 4.0E-41 T 14-10-2018 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SMART SM00387 418 537 3.8E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 2.0E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 4.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 4.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 4.1E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SUPERFAMILY SSF55874 389 534 1.02E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SMART SM00091 213 279 4.5E-4 T 14-10-2018 IPR000014 PAS domain VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 Gene3D G3DSA:3.30.565.10 382 538 5.2E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_07945 a741f67a06e84976a7c055205e54abb8 539 SUPERFAMILY SSF55785 215 306 1.52E-11 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 SMART SM00316 69 132 1.4 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 SMART SM00316 145 207 5.7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 SMART SM00316 3 64 8.6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 PIRSF PIRSF012524 1 277 5.4E-97 T 14-10-2018 IPR014464 Conserved virulence factor B VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 Pfam PF13509 S1 domain 4 63 1.5E-24 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 Pfam PF13509 S1 domain 71 132 8.7E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VEJY3_07655 990a30476c2c9c363e8394a7f37b7bd4 277 Gene3D G3DSA:1.10.10.10 215 277 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19461 59208bcede1e474b4e556ebfdfd719cc 331 SUPERFAMILY SSF53187 38 330 1.49E-49 T 14-10-2018 VEJY3_19461 59208bcede1e474b4e556ebfdfd719cc 331 PIRSF PIRSF039012 9 331 1.9E-90 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_19461 59208bcede1e474b4e556ebfdfd719cc 331 Gene3D G3DSA:3.40.630.10 14 329 4.2E-71 T 14-10-2018 VEJY3_19461 59208bcede1e474b4e556ebfdfd719cc 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 1.0E-65 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_23826 8c48bd2a5ba16f3559bed0276d286fb7 318 SUPERFAMILY SSF81345 4 313 2.22E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23826 8c48bd2a5ba16f3559bed0276d286fb7 318 Gene3D G3DSA:1.10.3470.10 1 317 7.9E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23826 8c48bd2a5ba16f3559bed0276d286fb7 318 Pfam PF01032 FecCD transport family 11 313 5.5E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_16026 319164f3ac94c7891a6c174e7bdea978 200 Pfam PF01966 HD domain 58 127 6.9E-5 T 14-10-2018 IPR006674 HD domain VEJY3_16026 319164f3ac94c7891a6c174e7bdea978 200 SUPERFAMILY SSF109604 11 135 6.45E-27 T 14-10-2018 VEJY3_16026 319164f3ac94c7891a6c174e7bdea978 200 Gene3D G3DSA:1.10.3210.10 39 192 1.1E-19 T 14-10-2018 VEJY3_16066 3c1a0d774bc55d06d6b20b8597afcdf0 257 Gene3D G3DSA:2.40.30.10 1 119 8.1E-33 T 14-10-2018 VEJY3_16066 3c1a0d774bc55d06d6b20b8597afcdf0 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 1.5E-32 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VEJY3_16066 3c1a0d774bc55d06d6b20b8597afcdf0 257 Pfam PF04954 Siderophore-interacting protein 127 239 9.8E-31 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VEJY3_16066 3c1a0d774bc55d06d6b20b8597afcdf0 257 Gene3D G3DSA:3.40.50.80 122 257 1.4E-44 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEJY3_16066 3c1a0d774bc55d06d6b20b8597afcdf0 257 SUPERFAMILY SSF63380 6 118 1.42E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEJY3_11265 c79a490e6c676004ca689edb4c5e4525 197 Gene3D G3DSA:3.30.70.1070 115 191 2.6E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_11265 c79a490e6c676004ca689edb4c5e4525 197 Pfam PF05036 Sporulation related domain 121 189 6.9E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_11265 c79a490e6c676004ca689edb4c5e4525 197 SUPERFAMILY SSF110997 120 193 4.97E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 1.4E-189 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.336 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 Gene3D G3DSA:3.40.1350.30 45 189 1.9E-137 T 14-10-2018 VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 SUPERFAMILY SSF53335 9 367 6.9E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14855 8ec506529323a9c1031cb2829279672a 368 Gene3D G3DSA:3.40.50.150 13 363 1.9E-137 T 14-10-2018 VEJY3_19521 9e4315cfdc3df32b4c9d1daceef29a5a 309 Gene3D G3DSA:1.40.20.10 9 307 1.3E-56 T 14-10-2018 IPR038186 CHAD domain superfamily VEJY3_19521 9e4315cfdc3df32b4c9d1daceef29a5a 309 SMART SM00880 24 287 1.2E-24 T 14-10-2018 IPR007899 CHAD domain VEJY3_19521 9e4315cfdc3df32b4c9d1daceef29a5a 309 Pfam PF05235 CHAD domain 35 252 3.4E-40 T 14-10-2018 IPR007899 CHAD domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 Pfam PF00571 CBS domain 75 132 1.9E-7 T 14-10-2018 IPR000644 CBS domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 14-10-2018 IPR000644 CBS domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 SMART SM00116 147 195 0.028 T 14-10-2018 IPR000644 CBS domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 SMART SM00116 84 133 0.069 T 14-10-2018 IPR000644 CBS domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 Gene3D G3DSA:3.30.465.10 204 296 2.9E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 SMART SM01091 211 289 2.4E-30 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 SUPERFAMILY SSF54631 65 206 1.52E-33 T 14-10-2018 VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 Gene3D G3DSA:3.10.580.10 57 203 3.9E-54 T 14-10-2018 VEJY3_03360 0cb892833fe01f59de6e1fe70b86bc7d 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 14-10-2018 IPR005170 Transporter-associated domain VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 SUPERFAMILY SSF56925 23 181 1.65E-34 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 Gene3D G3DSA:2.40.160.20 13 197 3.8E-42 T 14-10-2018 VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 PRINTS PR01021 OMPA domain signature 239 254 1.2E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 PRINTS PR01021 OMPA domain signature 254 270 1.2E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 SUPERFAMILY SSF103088 198 309 4.97E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 Pfam PF01389 OmpA-like transmembrane domain 23 180 5.6E-20 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 Gene3D G3DSA:3.30.1330.60 198 310 8.7E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_16606 2f59c67da171a06e0211ae860f7002a8 321 Pfam PF00691 OmpA family 217 303 7.2E-19 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 SUPERFAMILY SSF53633 6 236 1.27E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 Gene3D G3DSA:3.40.1160.10 4 257 1.3E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.0E-74 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 Pfam PF00696 Amino acid kinase family 5 231 1.1E-50 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 PIRSF PIRSF000726 3 63 9.9E-24 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_13145 d4a052d0861e8d93cb937b753c3c5c47 395 PIRSF PIRSF000726 59 386 2.9E-73 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_24241 b82ff31301dc8e27b161c0e50b8297af 185 SUPERFAMILY SSF52833 2 184 4.64E-56 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_24241 b82ff31301dc8e27b161c0e50b8297af 185 PIRSF PIRSF000239 2 185 6.4E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_24241 b82ff31301dc8e27b161c0e50b8297af 185 Pfam PF00578 AhpC/TSA family 3 131 6.1E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_24241 b82ff31301dc8e27b161c0e50b8297af 185 Gene3D G3DSA:3.40.30.10 1 184 4.8E-62 T 14-10-2018 VEJY3_24241 b82ff31301dc8e27b161c0e50b8297af 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_23371 471867287e8ea52ba11c1bc16a6e9cd4 316 PIRSF PIRSF037004 1 316 8.1E-139 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VEJY3_23371 471867287e8ea52ba11c1bc16a6e9cd4 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 8.7E-44 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 VEJY3_23371 471867287e8ea52ba11c1bc16a6e9cd4 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 2.9E-37 T 14-10-2018 IPR007553 Domain of unknown function DUF523 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 3.9E-17 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 PIRSF PIRSF001123 98 186 5.7E-4 T 14-10-2018 IPR008007 Peptidase M42 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 PIRSF PIRSF001123 254 368 7.6E-4 T 14-10-2018 IPR008007 Peptidase M42 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 PIRSF PIRSF001123 6 105 0.042 T 14-10-2018 IPR008007 Peptidase M42 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 Pfam PF07687 Peptidase dimerisation domain 182 273 7.4E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 Gene3D G3DSA:3.30.70.360 176 287 5.2E-113 T 14-10-2018 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 SUPERFAMILY SSF55031 177 289 6.02E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 Gene3D G3DSA:3.40.630.10 16 362 5.2E-113 T 14-10-2018 VEJY3_06485 015d7fdd29881e616a7e7099545b0d18 368 SUPERFAMILY SSF53187 7 367 5.03E-58 T 14-10-2018 VEJY3_08280 787c771419b82fe5c3325b4065897f17 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 3.4E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_08280 787c771419b82fe5c3325b4065897f17 425 Gene3D G3DSA:3.50.50.60 29 381 2.1E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_08280 787c771419b82fe5c3325b4065897f17 425 SUPERFAMILY SSF51905 28 409 1.23E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_08280 787c771419b82fe5c3325b4065897f17 425 Gene3D G3DSA:3.30.9.10 122 342 2.1E-69 T 14-10-2018 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Gene3D G3DSA:1.10.760.10 131 318 3.5E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 SUPERFAMILY SSF46626 239 320 7.31E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 PIRSF PIRSF000006 1 322 3.0E-110 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.2E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 6.1E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Gene3D G3DSA:1.20.58.1490 1 93 6.8E-34 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 SUPERFAMILY SSF46626 55 238 1.4E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 1.9E-22 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 3.5E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 3.5E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEJY3_07355 b2206a5d67bcc1310f63cf78fd385867 324 Gene3D G3DSA:1.10.760.10 209 295 3.5E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_10405 5e909039f4e3e560343cb2f4aaacb11d 171 Gene3D G3DSA:3.40.30.10 33 167 2.3E-19 T 14-10-2018 VEJY3_10405 5e909039f4e3e560343cb2f4aaacb11d 171 SUPERFAMILY SSF52833 41 166 7.35E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10405 5e909039f4e3e560343cb2f4aaacb11d 171 Pfam PF00578 AhpC/TSA family 42 146 1.7E-10 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_10405 5e909039f4e3e560343cb2f4aaacb11d 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_21746 f824993da8b88d24cf29e31e208297ee 280 Gene3D G3DSA:3.40.800.10 42 217 2.0E-8 T 14-10-2018 VEJY3_21746 f824993da8b88d24cf29e31e208297ee 280 SUPERFAMILY SSF52768 5 251 1.98E-20 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VEJY3_21746 f824993da8b88d24cf29e31e208297ee 280 Pfam PF00491 Arginase family 76 212 2.5E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 Gene3D G3DSA:2.160.10.10 1 184 6.9E-63 T 14-10-2018 VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 SUPERFAMILY SSF51161 2 182 1.34E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 160 3.5E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 SMART SM01266 4 56 1.5E-13 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEJY3_16461 3fb9fad540a18d590401d3b23d59afdc 184 Pfam PF12464 Maltose acetyltransferase 6 55 3.2E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 SUPERFAMILY SSF50891 1 162 1.3E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 Gene3D G3DSA:2.40.100.10 1 164 2.8E-66 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 6.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 6.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 6.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 PIRSF PIRSF001467 1 163 5.0E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEJY3_05610 58fa860c7a8f8845c61b7b0d1a764609 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 159 1.0E-48 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEJY3_19346 12661fa3617a598a3db51f58ff6d44b8 87 SUPERFAMILY SSF47473 40 80 3.95E-7 T 14-10-2018 IPR011992 EF-hand domain pair VEJY3_19346 12661fa3617a598a3db51f58ff6d44b8 87 Gene3D G3DSA:1.10.238.10 38 82 5.9E-9 T 14-10-2018 VEJY3_19346 12661fa3617a598a3db51f58ff6d44b8 87 Pfam PF13202 EF hand 40 58 1.7E-5 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 VEJY3_19346 12661fa3617a598a3db51f58ff6d44b8 87 Pfam PF13202 EF hand 61 80 0.0011 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 VEJY3_19346 12661fa3617a598a3db51f58ff6d44b8 87 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VEJY3_18316 dc484de08e73688d377d4d98ee8cff78 248 Gene3D G3DSA:3.20.20.70 1 155 1.8E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_18316 dc484de08e73688d377d4d98ee8cff78 248 SUPERFAMILY SSF102114 2 208 3.73E-25 T 14-10-2018 VEJY3_15285 53d4bc6bd07fcd6fe024a0e92b997346 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.097 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VEJY3_15285 53d4bc6bd07fcd6fe024a0e92b997346 185 Gene3D G3DSA:3.90.870.10 1 183 8.1E-63 T 14-10-2018 VEJY3_15285 53d4bc6bd07fcd6fe024a0e92b997346 185 Pfam PF01300 Telomere recombination 10 185 4.2E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VEJY3_15285 53d4bc6bd07fcd6fe024a0e92b997346 185 SUPERFAMILY SSF55821 2 182 3.36E-58 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEJY3_07820 97da2a0327f3a09238dad5032e2302eb 718 SUPERFAMILY SSF56935 26 718 1.65E-87 T 14-10-2018 VEJY3_07820 97da2a0327f3a09238dad5032e2302eb 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 5.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_07820 97da2a0327f3a09238dad5032e2302eb 718 Pfam PF00593 TonB dependent receptor 242 717 1.2E-27 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_07820 97da2a0327f3a09238dad5032e2302eb 718 Gene3D G3DSA:2.40.170.20 164 718 1.8E-48 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_07820 97da2a0327f3a09238dad5032e2302eb 718 Gene3D G3DSA:2.170.130.10 25 162 1.4E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.948 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 Pfam PF01202 Shikimate kinase 13 169 1.8E-57 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 Gene3D G3DSA:3.40.50.300 1 172 6.4E-58 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 PRINTS PR01100 Shikimate kinase family signature 7 22 2.2E-29 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 PRINTS PR01100 Shikimate kinase family signature 59 67 2.2E-29 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 PRINTS PR01100 Shikimate kinase family signature 98 115 2.2E-29 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 PRINTS PR01100 Shikimate kinase family signature 77 86 2.2E-29 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 PRINTS PR01100 Shikimate kinase family signature 31 44 2.2E-29 T 14-10-2018 VEJY3_14045 746cf581b1fd5ed732fe08e6e4909ea5 172 SUPERFAMILY SSF52540 4 169 3.18E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22096 3cd189b4b139f6435a557c19c60ad3ea 351 PIRSF PIRSF005508 1 351 7.2E-135 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VEJY3_22096 3cd189b4b139f6435a557c19c60ad3ea 351 Gene3D G3DSA:1.20.1530.20 4 342 1.4E-23 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_22096 3cd189b4b139f6435a557c19c60ad3ea 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 3.1E-61 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VEJY3_02090 0a663d9e5e67c7247b26ec80ad89c4b3 273 Pfam PF03799 Cell division protein FtsQ 140 252 3.3E-24 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB VEJY3_02090 0a663d9e5e67c7247b26ec80ad89c4b3 273 Gene3D G3DSA:3.40.50.11690 138 265 5.0E-37 T 14-10-2018 VEJY3_02090 0a663d9e5e67c7247b26ec80ad89c4b3 273 Gene3D G3DSA:3.10.20.310 68 136 1.6E-24 T 14-10-2018 VEJY3_02090 0a663d9e5e67c7247b26ec80ad89c4b3 273 Pfam PF08478 POTRA domain, FtsQ-type 67 136 8.9E-17 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type VEJY3_02090 0a663d9e5e67c7247b26ec80ad89c4b3 273 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 36 260 22.401 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 Pfam PF00912 Transglycosylase 55 229 2.7E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 SUPERFAMILY SSF56601 211 837 4.75E-113 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 SUPERFAMILY SSF53955 43 256 1.55E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 Gene3D G3DSA:3.40.710.10 243 328 2.9E-8 T 14-10-2018 VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 Gene3D G3DSA:1.10.3810.10 48 242 1.4E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 Pfam PF17092 Penicillin-binding protein OB-like domain 317 435 4.4E-34 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_14075 5929c4bd412cc64b2ac434f24f9d72c2 855 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 624 6.6E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEJY3_10730 0d8aa7c0910bd98cfd2adb4b0250b641 519 Pfam PF00916 Sulfate permease family 13 374 4.6E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEJY3_10730 0d8aa7c0910bd98cfd2adb4b0250b641 519 Pfam PF01740 STAS domain 417 503 4.8E-5 T 14-10-2018 IPR002645 STAS domain VEJY3_10730 0d8aa7c0910bd98cfd2adb4b0250b641 519 SUPERFAMILY SSF52091 416 498 2.16E-11 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_10730 0d8aa7c0910bd98cfd2adb4b0250b641 519 Gene3D G3DSA:3.30.750.24 409 499 4.2E-26 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 SUPERFAMILY SSF50494 43 265 3.95E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 Gene3D G3DSA:2.30.42.10 256 354 1.2E-23 T 14-10-2018 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 SMART SM00228 256 338 2.0E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 Gene3D G3DSA:2.40.10.10 143 255 1.4E-35 T 14-10-2018 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 Pfam PF13180 PDZ domain 257 346 4.7E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 SUPERFAMILY SSF50156 239 346 3.81E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 7.2E-33 T 14-10-2018 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 5.3E-167 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VEJY3_01955 db523ff1729274567d5273b59f59e10a 354 Gene3D G3DSA:2.40.10.10 32 142 1.7E-33 T 14-10-2018 VEJY3_01965 4c9ec67badf967a15b39259765e313dc 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 4.5E-47 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VEJY3_01965 4c9ec67badf967a15b39259765e313dc 147 PIRSF PIRSF006318 1 136 7.8E-56 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VEJY3_21171 94b2a01b42e724da7c7310ec12bbb161 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.0E-15 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VEJY3_21171 94b2a01b42e724da7c7310ec12bbb161 92 PIRSF PIRSF028784 1 92 1.6E-29 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 Gene3D G3DSA:1.20.1220.12 421 542 1.3E-50 T 14-10-2018 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 Pfam PF01274 Malate synthase 21 541 1.3E-204 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 SUPERFAMILY SSF51645 7 541 3.27E-189 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 PIRSF PIRSF001363 10 542 1.1E-252 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_02665 c5e6ef04025ddd496453fd2ec050857a 542 Gene3D G3DSA:3.20.20.360 11 420 2.3E-191 T 14-10-2018 VEJY3_16616 4d2410992c8377e3a954b1955598919d 456 SUPERFAMILY SSF143548 16 155 1.65E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_16616 4d2410992c8377e3a954b1955598919d 456 Pfam PF03315 Serine dehydratase beta chain 3 153 8.1E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEJY3_16616 4d2410992c8377e3a954b1955598919d 456 Gene3D G3DSA:3.30.1330.90 10 157 4.4E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_16616 4d2410992c8377e3a954b1955598919d 456 Pfam PF03313 Serine dehydratase alpha chain 190 447 1.8E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEJY3_09615 3957f2d33f6987fc64b81e85ac3633e5 204 Pfam PF13240 zinc-ribbon domain 3 24 3.1E-7 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 SUPERFAMILY SSF52096 5 318 2.11E-105 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.772 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 7.6E-165 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 1.6E-63 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEJY3_11995 20b903de8d4191d368c8f37ff9e532eb 319 Gene3D G3DSA:3.90.226.10 4 319 5.2E-121 T 14-10-2018 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 Gene3D G3DSA:3.40.50.150 75 274 4.8E-60 T 14-10-2018 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 SUPERFAMILY SSF53335 76 269 3.47E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PIRSF PIRSF000410 1 274 1.4E-73 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 SUPERFAMILY SSF47757 3 75 1.05E-14 T 14-10-2018 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 SMART SM00138 8 272 6.3E-132 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 Gene3D G3DSA:1.10.155.10 1 74 2.0E-10 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 3.1E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 2.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEJY3_03540 1e53a3fa290e3dec88489e24994e0d16 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 3.5E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VEJY3_16646 a2047f3dea27220980ea31b174bbe9a2 602 Gene3D G3DSA:3.40.50.720 397 509 8.3E-10 T 14-10-2018 VEJY3_16646 a2047f3dea27220980ea31b174bbe9a2 602 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 1.5E-32 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_16646 a2047f3dea27220980ea31b174bbe9a2 602 Pfam PF02254 TrkA-N domain 399 490 6.1E-8 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_16646 a2047f3dea27220980ea31b174bbe9a2 602 Gene3D G3DSA:1.20.1530.20 6 388 2.3E-13 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_16646 a2047f3dea27220980ea31b174bbe9a2 602 SUPERFAMILY SSF51735 399 494 3.68E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03910 6bd04ff78a6049406466621b866401cc 142 PIRSF PIRSF000714 2 140 1.5E-52 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VEJY3_03910 6bd04ff78a6049406466621b866401cc 142 Pfam PF01230 HIT domain 11 99 1.7E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VEJY3_03910 6bd04ff78a6049406466621b866401cc 142 Gene3D G3DSA:3.30.428.10 1 142 1.2E-41 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_03910 6bd04ff78a6049406466621b866401cc 142 SUPERFAMILY SSF54197 3 133 3.19E-33 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_03255 943958056acfd40ba10a17685cecb176 344 SUPERFAMILY SSF55021 248 343 9.04E-26 T 14-10-2018 VEJY3_03255 943958056acfd40ba10a17685cecb176 344 Gene3D G3DSA:3.30.70.260 244 344 2.0E-41 T 14-10-2018 VEJY3_03255 943958056acfd40ba10a17685cecb176 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_03255 943958056acfd40ba10a17685cecb176 344 SUPERFAMILY SSF52540 1 239 4.28E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03255 943958056acfd40ba10a17685cecb176 344 SMART SM00930 265 340 4.2E-27 T 14-10-2018 IPR018449 NIL domain VEJY3_03255 943958056acfd40ba10a17685cecb176 344 Pfam PF09383 NIL domain 268 339 1.5E-20 T 14-10-2018 IPR018449 NIL domain VEJY3_03255 943958056acfd40ba10a17685cecb176 344 Pfam PF00005 ABC transporter 21 169 1.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_03255 943958056acfd40ba10a17685cecb176 344 SMART SM00382 30 235 7.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_03255 943958056acfd40ba10a17685cecb176 344 Gene3D G3DSA:3.40.50.300 1 232 9.2E-75 T 14-10-2018 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 Gene3D G3DSA:3.10.310.10 5 272 2.6E-106 T 14-10-2018 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.3E-101 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.508 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 SUPERFAMILY SSF54506 2 274 4.45E-53 T 14-10-2018 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 Pfam PF01678 Diaminopimelate epimerase 5 125 5.5E-34 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 Pfam PF01678 Diaminopimelate epimerase 154 269 9.1E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEJY3_15050 26e6ca22e3a5b4c17be936e4a9edc2db 276 Gene3D G3DSA:3.10.310.10 117 263 2.6E-106 T 14-10-2018 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 SUPERFAMILY SSF46785 4 109 1.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 SUPERFAMILY SSF53850 90 289 6.13E-43 T 14-10-2018 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 Gene3D G3DSA:3.40.190.290 90 288 3.2E-48 T 14-10-2018 VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 Pfam PF03466 LysR substrate binding domain 89 287 5.1E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_06395 7d27ed7fca5ae56129503693da4462c7 289 Gene3D G3DSA:1.10.10.10 1 88 6.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 Gene3D G3DSA:1.20.58.340 252 307 5.8E-9 T 14-10-2018 VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 Gene3D G3DSA:3.30.460.20 1 124 3.3E-45 T 14-10-2018 VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 Pfam PF01544 CorA-like Mg2+ transporter protein 30 305 1.2E-43 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 SUPERFAMILY SSF143865 28 236 1.18E-22 T 14-10-2018 VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 SUPERFAMILY SSF144083 245 306 2.35E-13 T 14-10-2018 VEJY3_12410 02f11acf4e6b8c7b8b95e415577e1cec 315 Gene3D G3DSA:1.20.58.340 125 249 5.5E-28 T 14-10-2018 VEJY3_06710 6d1204439d4f2f55117c61318016cc55 194 Pfam PF14065 Protein of unknown function (DUF4255) 12 174 1.6E-23 T 14-10-2018 IPR025351 Protein of unknown function DUF4255 VEJY3_03035 33022ef30a5e07aaeb2337ebc5b9a390 519 Pfam PF03806 AbgT putative transporter family 19 517 2.8E-211 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VEJY3_22721 78949a3f7cb08fef097c2ed9766a78c6 290 SMART SM00062 31 278 7.0E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_22721 78949a3f7cb08fef097c2ed9766a78c6 290 SUPERFAMILY SSF53850 17 277 2.57E-41 T 14-10-2018 VEJY3_22721 78949a3f7cb08fef097c2ed9766a78c6 290 Gene3D G3DSA:3.40.190.10 122 235 4.1E-49 T 14-10-2018 VEJY3_22721 78949a3f7cb08fef097c2ed9766a78c6 290 Gene3D G3DSA:3.40.190.10 29 278 4.1E-49 T 14-10-2018 VEJY3_22721 78949a3f7cb08fef097c2ed9766a78c6 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 277 2.3E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_19046 907eab39667e6159735fe9841a5cc7f1 320 Pfam PF01882 Protein of unknown function DUF58 58 143 8.2E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VEJY3_09930 c2b6e55e64b6a0f16959868dd6975da6 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.5E-72 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 VEJY3_12900 eb3f874fd12c9290f74ea2207303da27 421 Pfam PF02447 GntP family permease 9 414 1.8E-24 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_05480 da270283ce04219efcfe7de263de9686 430 Gene3D G3DSA:3.50.50.60 3 401 1.1E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_05480 da270283ce04219efcfe7de263de9686 430 Gene3D G3DSA:3.30.70.1990 282 363 1.1E-27 T 14-10-2018 VEJY3_05480 da270283ce04219efcfe7de263de9686 430 SUPERFAMILY SSF51905 1 413 9.06E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_05480 da270283ce04219efcfe7de263de9686 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 1.8E-17 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VEJY3_05480 da270283ce04219efcfe7de263de9686 430 Gene3D G3DSA:1.10.405.20 75 199 1.1E-27 T 14-10-2018 VEJY3_02480 07241c810a22fd4e5505208f7086f49d 333 Gene3D G3DSA:2.70.70.10 121 275 5.2E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_02480 07241c810a22fd4e5505208f7086f49d 333 Pfam PF01551 Peptidase family M23 174 269 2.3E-30 T 14-10-2018 IPR016047 Peptidase M23 VEJY3_02480 07241c810a22fd4e5505208f7086f49d 333 SUPERFAMILY SSF51261 81 271 1.14E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_08170 0842e66883e039838cf86e5115b682f8 215 Pfam PF01810 LysE type translocator 18 213 7.4E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_08170 0842e66883e039838cf86e5115b682f8 215 PIRSF PIRSF006324 4 215 7.2E-54 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_15190 414c44f1749cfca701acc97a3e203bcf 290 Gene3D G3DSA:3.20.20.150 6 287 2.6E-87 T 14-10-2018 VEJY3_15190 414c44f1749cfca701acc97a3e203bcf 290 Pfam PF05114 Protein of unknown function (DUF692) 10 274 3.1E-107 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 VEJY3_15190 414c44f1749cfca701acc97a3e203bcf 290 SUPERFAMILY SSF51658 30 254 6.04E-12 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_15190 414c44f1749cfca701acc97a3e203bcf 290 Hamap MF_00697 UPF0276 protein . 10 282 44.336 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 VEJY3_10715 688c4a988ace4cca42a9bc420e2ce106 193 Pfam PF02545 Maf-like protein 5 186 2.7E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_10715 688c4a988ace4cca42a9bc420e2ce106 193 SUPERFAMILY SSF52972 1 186 2.88E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_10715 688c4a988ace4cca42a9bc420e2ce106 193 Gene3D G3DSA:3.90.950.10 5 193 1.4E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_10715 688c4a988ace4cca42a9bc420e2ce106 193 PIRSF PIRSF006305 1 191 5.4E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_10715 688c4a988ace4cca42a9bc420e2ce106 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 28.601 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Gene3D G3DSA:3.40.50.300 2 160 8.8E-43 T 14-10-2018 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Gene3D G3DSA:3.30.300.20 385 467 8.2E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 SMART SM00382 208 355 0.2 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 SMART SM00382 1 174 1.7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 6.1E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Gene3D G3DSA:3.40.50.300 204 382 4.7E-50 T 14-10-2018 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 SUPERFAMILY SSF52540 4 163 2.73E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.291 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 PIRSF PIRSF006485 1 473 6.0E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 SUPERFAMILY SSF52540 207 471 9.17E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 5.5E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_02800 c32e60e297344aaa5da17eb91441fb6f 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.3E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 SUPERFAMILY SSF53850 1 252 1.25E-62 T 14-10-2018 VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 Gene3D G3DSA:3.40.190.10 109 208 5.3E-72 T 14-10-2018 VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 Gene3D G3DSA:3.40.190.10 26 247 5.3E-72 T 14-10-2018 VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 249 4.2E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 SMART SM00062 23 251 7.3E-67 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_17046 ce3a9660d61f21ca2c28ea717f853caf 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_21296 f802a5e2aedd8d6e5a266c6efe46b739 452 Pfam PF04632 Fusaric acid resistance protein family 9 295 9.3E-38 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEJY3_17531 179d2bd76276bdf1dddb98201a7e38f8 365 SUPERFAMILY SSF53822 27 364 1.09E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_17531 179d2bd76276bdf1dddb98201a7e38f8 365 Pfam PF13407 Periplasmic binding protein domain 69 324 5.3E-16 T 14-10-2018 IPR025997 Periplasmic binding protein VEJY3_17531 179d2bd76276bdf1dddb98201a7e38f8 365 Gene3D G3DSA:3.40.50.2300 33 363 2.6E-149 T 14-10-2018 VEJY3_17531 179d2bd76276bdf1dddb98201a7e38f8 365 Gene3D G3DSA:3.40.50.2300 180 359 2.6E-149 T 14-10-2018 VEJY3_14385 d0d64b2c85fa2222aac933c09925ad75 181 Pfam PF00929 Exonuclease 9 170 1.5E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_14385 d0d64b2c85fa2222aac933c09925ad75 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.979 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 VEJY3_14385 d0d64b2c85fa2222aac933c09925ad75 181 SUPERFAMILY SSF53098 3 180 1.43E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_14385 d0d64b2c85fa2222aac933c09925ad75 181 SMART SM00479 7 180 3.0E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_14385 d0d64b2c85fa2222aac933c09925ad75 181 Gene3D G3DSA:3.30.420.10 1 181 2.5E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_15816 6b82f28f89c5e0e1c9a59eb93992a3de 232 SUPERFAMILY SSF52540 1 221 1.29E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15816 6b82f28f89c5e0e1c9a59eb93992a3de 232 SMART SM00382 30 217 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15816 6b82f28f89c5e0e1c9a59eb93992a3de 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_15816 6b82f28f89c5e0e1c9a59eb93992a3de 232 Pfam PF00005 ABC transporter 21 169 7.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_15816 6b82f28f89c5e0e1c9a59eb93992a3de 232 Gene3D G3DSA:3.40.50.300 1 227 6.6E-66 T 14-10-2018 VEJY3_05325 ecb5b24a1344aaa5202c5fc6510040f9 303 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 28 291 3.5E-71 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VEJY3_05325 ecb5b24a1344aaa5202c5fc6510040f9 303 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 303 118.622 T 14-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VEJY3_05325 ecb5b24a1344aaa5202c5fc6510040f9 303 Gene3D G3DSA:1.10.4200.10 169 295 3.5E-8 T 14-10-2018 VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 130 158 4.4E-7 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 268 295 0.0061 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 232 267 1.6E-9 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 88 122 3.8E-7 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 53 86 6.1E-8 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 196 230 0.002 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Pfam PF08238 Sel1 repeat 160 195 1.4E-5 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SUPERFAMILY SSF81901 26 166 1.4E-33 T 14-10-2018 VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Gene3D G3DSA:1.25.40.10 141 329 1.0E-50 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 232 267 2.0E-11 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 160 195 5.7E-6 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 268 303 0.0012 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 196 231 6.5E-6 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 52 87 5.0E-8 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 88 123 4.4E-9 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SMART SM00671 124 159 3.5E-7 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 Gene3D G3DSA:1.25.40.10 18 140 6.9E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_20856 95d83f07754b6b51bb385d1a4ec0c856 341 SUPERFAMILY SSF81901 144 299 1.83E-38 T 14-10-2018 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 SUPERFAMILY SSF50331 250 372 1.59E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 Pfam PF08402 TOBE domain 292 371 5.5E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 SMART SM00382 42 225 1.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 Gene3D G3DSA:2.40.50.940 236 298 1.3E-11 T 14-10-2018 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 SUPERFAMILY SSF52540 18 257 6.14E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 Pfam PF00005 ABC transporter 34 174 3.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 Gene3D G3DSA:3.40.50.300 17 235 2.1E-69 T 14-10-2018 VEJY3_07305 5a9713a8911c9fdb980a975c24277931 377 Gene3D G3DSA:2.40.50.140 299 316 1.3E-11 T 14-10-2018 VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 162 8.3E-4 T 14-10-2018 VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.8E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 SUPERFAMILY SSF51735 4 238 3.01E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.0E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 Gene3D G3DSA:3.40.50.720 1 239 1.6E-82 T 14-10-2018 VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 2.4E-61 T 14-10-2018 VEJY3_17321 b7e946dd7627d8c61286ca0a71cdd605 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 Gene3D G3DSA:1.10.10.60 128 232 2.0E-25 T 14-10-2018 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 SUPERFAMILY SSF46689 182 229 3.09E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 1.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 1.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 Pfam PF12833 Helix-turn-helix domain 153 229 8.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 182 224 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_01795 90a7dc8f700d0391116d2864078ded39 235 SMART SM00342 146 228 2.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 Pfam PF03466 LysR substrate binding domain 94 289 5.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 SUPERFAMILY SSF46785 4 87 2.58E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 SUPERFAMILY SSF53850 95 292 4.16E-35 T 14-10-2018 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 Gene3D G3DSA:3.40.190.10 103 286 1.2E-45 T 14-10-2018 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 Gene3D G3DSA:3.40.190.10 163 259 1.2E-45 T 14-10-2018 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12555 5c2f1c7796b0c972e5fdf1c95de14d3e 308 Gene3D G3DSA:1.10.10.10 7 96 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03595 cd7feb1e7c22fa0a97848242ea59e53e 397 SUPERFAMILY SSF64518 3 397 1.07E-67 T 14-10-2018 VEJY3_03595 cd7feb1e7c22fa0a97848242ea59e53e 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.5E-95 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VEJY3_03595 cd7feb1e7c22fa0a97848242ea59e53e 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 9.9E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_03595 cd7feb1e7c22fa0a97848242ea59e53e 397 Gene3D G3DSA:1.20.1330.10 263 372 1.9E-10 T 14-10-2018 VEJY3_03595 cd7feb1e7c22fa0a97848242ea59e53e 397 Gene3D G3DSA:1.20.1330.10 42 226 2.2E-34 T 14-10-2018 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 Pfam PF00672 HAMP domain 171 217 2.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 6.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 SMART SM00388 222 282 7.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 Gene3D G3DSA:1.10.287.130 167 277 5.2E-23 T 14-10-2018 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 SMART SM00304 169 221 5.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 SMART SM00387 321 430 5.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 Gene3D G3DSA:3.30.565.10 284 430 7.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 428 6.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 3.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_00720 d23bdefd653a1ca3538a4394b0066eff 430 SUPERFAMILY SSF55874 284 429 6.55E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 2.1E-205 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 Pfam PF01228 Glycine radical 628 739 1.7E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 SUPERFAMILY SSF51998 4 757 3.89E-289 T 14-10-2018 VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 VEJY3_04605 91ae70ec3259b2ecf717c00f067507bf 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 PIRSF PIRSF015601 2 242 8.0E-57 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 Pfam PF04452 RNA methyltransferase 20 236 1.9E-75 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 SUPERFAMILY SSF75217 75 242 9.59E-53 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 Gene3D G3DSA:3.40.1280.10 74 243 1.2E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 SUPERFAMILY SSF88697 2 70 6.21E-18 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_13425 e43b172b9dc1bc65ec047470e18548d2 243 Gene3D G3DSA:2.40.240.20 1 70 6.6E-23 T 14-10-2018 VEJY3_07295 ec0abb6f6c39cbfae6139a445074856d 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07295 ec0abb6f6c39cbfae6139a445074856d 256 SUPERFAMILY SSF161098 4 254 1.78E-55 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07295 ec0abb6f6c39cbfae6139a445074856d 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_05625 0f5990a7fd815daceb5bc3ceac473d68 212 Pfam PF02698 DUF218 domain 33 147 6.9E-23 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VEJY3_05625 0f5990a7fd815daceb5bc3ceac473d68 212 Gene3D G3DSA:3.40.50.620 14 151 5.9E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_13955 d2129fd394417557c8aec9f6d0cc2fa5 219 Pfam PF13505 Outer membrane protein beta-barrel domain 8 219 1.9E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_18891 4b044061c6f6b9ab3ce4fcc1940c307f 331 Pfam PF03116 NQR2, RnfD, RnfE family 9 324 2.8E-102 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEJY3_18891 4b044061c6f6b9ab3ce4fcc1940c307f 331 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 4 326 24.019 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 SUPERFAMILY SSF53623 100 313 1.96E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 SUPERFAMILY SSF53244 316 450 2.98E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Gene3D G3DSA:3.40.1390.10 1 80 8.0E-30 T 14-10-2018 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Pfam PF08245 Mur ligase middle domain 105 295 4.7E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.945 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Gene3D G3DSA:3.90.190.20 315 453 3.5E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 SUPERFAMILY SSF63418 1 96 1.27E-26 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Gene3D G3DSA:3.40.1190.10 81 314 9.0E-75 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 1.0E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_02060 d2d890ec39747741c2b88d7bf5ee3c81 454 Pfam PF01225 Mur ligase family, catalytic domain 24 83 2.8E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 Pfam PF03466 LysR substrate binding domain 88 285 8.4E-30 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 Gene3D G3DSA:3.40.190.10 103 285 4.4E-46 T 14-10-2018 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 SUPERFAMILY SSF53850 88 291 1.76E-33 T 14-10-2018 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 SUPERFAMILY SSF46785 1 83 9.98E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 Gene3D G3DSA:3.40.190.10 162 261 4.4E-46 T 14-10-2018 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 Gene3D G3DSA:1.10.10.10 1 88 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16916 6df9f49c774c532fda92bfbfa61723a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 7.3E-132 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 SUPERFAMILY SSF55729 1 338 3.16E-128 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 8.9E-137 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 Gene3D G3DSA:2.40.40.20 277 339 3.8E-5 T 14-10-2018 VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 4.1E-131 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEJY3_14280 8fbf81bc765a0905134cf15848757c70 339 Gene3D G3DSA:3.40.630.30 1 274 1.9E-112 T 14-10-2018 VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 Gene3D G3DSA:3.40.50.300 177 456 1.1E-105 T 14-10-2018 VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 SUPERFAMILY SSF48024 18 129 1.44E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 9.9E-113 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 SUPERFAMILY SSF52540 197 449 2.24E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.5E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VEJY3_13995 3db6922b3ff48bcd3d5c95f10e8a291a 466 Gene3D G3DSA:1.10.860.10 12 176 9.1E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 Pfam PF00202 Aminotransferase class-III 8 435 2.0E-106 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 Gene3D G3DSA:3.90.1150.10 15 435 1.9E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 PIRSF PIRSF000521 1 438 5.0E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 SUPERFAMILY SSF53383 7 438 1.0E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 Gene3D G3DSA:3.40.640.10 48 326 1.9E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_02875 026bdf6b34136d5564a3e836ba503455 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_16741 0772b9a419164c850160ba921afe32f1 241 Pfam PF00293 NUDIX domain 17 142 3.2E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_16741 0772b9a419164c850160ba921afe32f1 241 SUPERFAMILY SSF55811 16 159 1.3E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_16741 0772b9a419164c850160ba921afe32f1 241 Gene3D G3DSA:3.90.79.10 3 161 9.2E-26 T 14-10-2018 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 420 32.912 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 8.2E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 254 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 SUPERFAMILY SSF53720 9 421 1.88E-71 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 PIRSF PIRSF000099 5 423 1.8E-122 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 Gene3D G3DSA:3.40.50.1980 22 223 2.2E-108 T 14-10-2018 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 Gene3D G3DSA:3.40.50.1980 225 342 2.2E-108 T 14-10-2018 VEJY3_22851 7379b34c7c4c2fabe66ab16ad718e290 430 Pfam PF00815 Histidinol dehydrogenase 15 420 6.5E-143 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_23561 b17aa9fcbfc15eefc2ea83d68034fe9e 127 SUPERFAMILY SSF54593 1 126 1.88E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_23561 b17aa9fcbfc15eefc2ea83d68034fe9e 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 3.1E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_23561 b17aa9fcbfc15eefc2ea83d68034fe9e 127 Gene3D G3DSA:3.10.180.10 7 126 3.8E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_12640 67024ff95a35f51d4eab65ae185c67ce 175 PIRSF PIRSF025550 1 174 1.9E-86 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VEJY3_12640 67024ff95a35f51d4eab65ae185c67ce 175 SUPERFAMILY SSF55718 44 139 4.0E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEJY3_12640 67024ff95a35f51d4eab65ae185c67ce 175 Gene3D G3DSA:3.30.1050.10 12 139 2.2E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEJY3_12640 67024ff95a35f51d4eab65ae185c67ce 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 1.8E-18 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 SUPERFAMILY SSF81799 113 216 3.79E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.941 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 SUPERFAMILY SSF53335 7 316 3.31E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 Gene3D G3DSA:1.10.150.170 112 218 4.6E-101 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 Gene3D G3DSA:3.40.50.150 10 315 4.6E-101 T 14-10-2018 VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 Pfam PF01795 MraW methylase family 5 315 2.2E-109 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEJY3_02040 36b78fce5c3756260333a82f63b89399 316 PIRSF PIRSF004486 1 316 9.9E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 Gene3D G3DSA:3.40.640.10 62 337 3.6E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 Pfam PF00202 Aminotransferase class-III 28 435 2.8E-96 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 Gene3D G3DSA:3.90.1150.10 8 440 3.6E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 SUPERFAMILY SSF53383 11 441 1.19E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_04385 edf3ca8deb0be13064602a1e0c4a17a3 449 PIRSF PIRSF000521 28 443 3.9E-31 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_04020 e32060e84dc00cb4871fcb24a5d48f80 353 Pfam PF16872 Putative phage abortive infection protein 210 290 9.5E-23 T 14-10-2018 IPR031709 Putative phage abortive infection protein VEJY3_15140 69c86243bcb18994e0155c090a6bc669 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.382 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VEJY3_15140 69c86243bcb18994e0155c090a6bc669 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.4E-37 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 PIRSF PIRSF000164 10 336 5.5E-106 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.7E-90 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.508 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 Gene3D G3DSA:3.20.20.70 2 336 3.8E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 SUPERFAMILY SSF51395 1 336 1.07E-109 T 14-10-2018 VEJY3_07595 9a61db9058e5868358b680f5cb0ec823 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VEJY3_10995 5e3ca9ebb063585ffdfbddcdbf4f839c 227 SUPERFAMILY SSF51735 1 212 1.46E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10995 5e3ca9ebb063585ffdfbddcdbf4f839c 227 Pfam PF00106 short chain dehydrogenase 7 190 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10995 5e3ca9ebb063585ffdfbddcdbf4f839c 227 Gene3D G3DSA:3.40.50.720 1 218 1.0E-21 T 14-10-2018 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Pfam PF00082 Subtilase family 146 333 1.4E-26 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Gene3D G3DSA:2.60.120.260 561 677 4.0E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Pfam PF02225 PA domain 374 465 1.6E-6 T 14-10-2018 IPR003137 PA domain VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Gene3D G3DSA:3.50.30.30 335 480 4.7E-158 T 14-10-2018 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 SUPERFAMILY SSF52743 123 546 7.11E-104 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Pfam PF05922 Peptidase inhibitor I9 43 120 6.1E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 SUPERFAMILY SSF49785 567 676 5.1E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Pfam PF01483 Proprotein convertase P-domain 597 676 9.2E-22 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Gene3D G3DSA:3.40.50.200 144 545 4.7E-158 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Pfam PF00082 Subtilase family 476 538 9.7E-14 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEJY3_16541 ee1184560bb3a522598d143dc031573d 677 Gene3D G3DSA:3.30.70.80 37 125 8.5E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 Gene3D G3DSA:3.10.105.10 316 531 4.5E-193 T 14-10-2018 VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 481 3.5E-94 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 Gene3D G3DSA:3.90.76.10 91 214 4.5E-193 T 14-10-2018 VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 SUPERFAMILY SSF53850 59 549 4.71E-148 T 14-10-2018 VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 PIRSF PIRSF002741 5 561 8.9E-118 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 107 128 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_10865 041df687e64bb02db859b520a044f1d0 561 Gene3D G3DSA:3.40.190.10 61 543 4.5E-193 T 14-10-2018 VEJY3_20541 29f71d2b8eca1539b4784142d7282127 302 PIRSF PIRSF037505 1 301 8.7E-14 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 VEJY3_20541 29f71d2b8eca1539b4784142d7282127 302 Gene3D G3DSA:3.20.20.330 1 302 2.5E-72 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_20541 29f71d2b8eca1539b4784142d7282127 302 SUPERFAMILY SSF82282 3 301 3.53E-79 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_20541 29f71d2b8eca1539b4784142d7282127 302 Pfam PF02574 Homocysteine S-methyltransferase 7 298 6.9E-57 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 SUPERFAMILY SSF48498 104 193 3.41E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 96.669 T 14-10-2018 IPR017757 Transcriptional repressor BetI VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 7.4E-32 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 SUPERFAMILY SSF46689 4 76 5.64E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_18586 d0aaf69d56e9be3bd647ca4afd0e2e4d 199 Gene3D G3DSA:1.10.357.10 5 197 3.5E-44 T 14-10-2018 VEJY3_14735 a82c7c1b5550c2a85e3b40d318344c33 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 8.3E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEJY3_14735 a82c7c1b5550c2a85e3b40d318344c33 307 SUPERFAMILY SSF52283 22 116 4.36E-7 T 14-10-2018 VEJY3_14735 a82c7c1b5550c2a85e3b40d318344c33 307 SUPERFAMILY SSF51735 93 273 5.34E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14735 a82c7c1b5550c2a85e3b40d318344c33 307 Gene3D G3DSA:3.40.50.720 91 276 8.5E-93 T 14-10-2018 VEJY3_14735 a82c7c1b5550c2a85e3b40d318344c33 307 Gene3D G3DSA:3.40.50.720 33 299 8.5E-93 T 14-10-2018 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 9.5E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 496 2.5E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 Gene3D G3DSA:1.10.8.870 404 475 1.4E-14 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 Gene3D G3DSA:3.30.9.10 94 332 6.2E-142 T 14-10-2018 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.9E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 SUPERFAMILY SSF51905 16 385 5.04E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_12405 f43aa44743dec972093023f00d0c1816 519 Gene3D G3DSA:3.50.50.60 17 378 6.2E-142 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_17221 e429115d1bf7553c3c139c21f8dd2b49 335 Gene3D G3DSA:3.40.630.10 1 330 5.6E-110 T 14-10-2018 VEJY3_17221 e429115d1bf7553c3c139c21f8dd2b49 335 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 47 329 2.4E-70 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_17221 e429115d1bf7553c3c139c21f8dd2b49 335 PIRSF PIRSF039012 1 332 2.4E-81 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_17221 e429115d1bf7553c3c139c21f8dd2b49 335 SUPERFAMILY SSF53187 17 329 2.65E-54 T 14-10-2018 VEJY3_04860 2c87e4214e03b1f315514cfc3131be78 323 SUPERFAMILY SSF53335 91 323 2.39E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_04860 2c87e4214e03b1f315514cfc3131be78 323 Gene3D G3DSA:3.40.50.150 60 292 1.6E-21 T 14-10-2018 VEJY3_04860 2c87e4214e03b1f315514cfc3131be78 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.51 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VEJY3_04860 2c87e4214e03b1f315514cfc3131be78 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.3E-173 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 Gene3D G3DSA:3.40.50.720 1 164 4.9E-57 T 14-10-2018 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 Gene3D G3DSA:1.10.1040.10 165 298 9.3E-44 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 1.2E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 PIRSF PIRSF000103 1 298 5.6E-83 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 SUPERFAMILY SSF51735 3 163 6.17E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.5E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_18576 6c3a0427023bb497d462440af2561d53 298 SUPERFAMILY SSF48179 163 295 6.12E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_00335 720728b0e94fb8daed7e9ae6766e0131 146 Pfam PF01478 Type IV leader peptidase family 12 105 9.2E-7 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VEJY3_17336 cc47affa0d5d80b220c9957fc7f2ad76 157 SUPERFAMILY SSF52833 1 156 3.48E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_17336 cc47affa0d5d80b220c9957fc7f2ad76 157 Gene3D G3DSA:3.40.30.10 2 157 5.1E-60 T 14-10-2018 VEJY3_17336 cc47affa0d5d80b220c9957fc7f2ad76 157 Pfam PF08534 Redoxin 3 154 5.0E-39 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEJY3_01760 0015ebf33d7249d8e43925f9a3ec3656 176 SUPERFAMILY SSF158668 4 170 3.66E-58 T 14-10-2018 IPR038026 MtlR-like superfamily VEJY3_01760 0015ebf33d7249d8e43925f9a3ec3656 176 Gene3D G3DSA:1.20.120.330 1 172 7.8E-72 T 14-10-2018 VEJY3_01760 0015ebf33d7249d8e43925f9a3ec3656 176 Pfam PF05068 Mannitol repressor 7 170 1.3E-61 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like VEJY3_06140 0231306755d610e20efae855ce7c5829 274 PIRSF PIRSF006157 15 273 4.8E-87 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 VEJY3_06140 0231306755d610e20efae855ce7c5829 274 SUPERFAMILY SSF53213 19 271 1.96E-87 T 14-10-2018 VEJY3_06140 0231306755d610e20efae855ce7c5829 274 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 23 248 3.2E-32 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VEJY3_06140 0231306755d610e20efae855ce7c5829 274 Gene3D G3DSA:3.40.830.10 7 272 1.9E-85 T 14-10-2018 VEJY3_10935 b2d4a91bfb824105e63a10b75ee00740 210 Pfam PF04205 FMN-binding domain 99 187 1.8E-18 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_10935 b2d4a91bfb824105e63a10b75ee00740 210 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 193 26.381 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEJY3_10935 b2d4a91bfb824105e63a10b75ee00740 210 PIRSF PIRSF006091 1 204 2.0E-74 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEJY3_10935 b2d4a91bfb824105e63a10b75ee00740 210 SMART SM00900 99 191 8.1E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 Pfam PF00795 Carbon-nitrogen hydrolase 225 485 9.0E-35 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 5.2E-7 T 14-10-2018 IPR000182 GNAT domain VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 Gene3D G3DSA:3.60.110.10 222 508 1.4E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 Gene3D G3DSA:3.40.630.30 4 221 8.7E-49 T 14-10-2018 VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 SUPERFAMILY SSF56317 222 492 9.29E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_02895 cbe0767fb1f4a57dc817768fc1835111 512 SUPERFAMILY SSF55729 5 140 1.53E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_18361 223bd5eb8675668c13f75cfe0b685785 191 Gene3D G3DSA:2.160.10.10 8 190 2.3E-57 T 14-10-2018 VEJY3_18361 223bd5eb8675668c13f75cfe0b685785 191 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 79 114 8.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_18361 223bd5eb8675668c13f75cfe0b685785 191 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 133 168 4.8E-11 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_18361 223bd5eb8675668c13f75cfe0b685785 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_18361 223bd5eb8675668c13f75cfe0b685785 191 SUPERFAMILY SSF51161 51 190 6.93E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 Pfam PF14697 4Fe-4S dicluster domain 102 156 6.8E-13 T 14-10-2018 VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 PIRSF PIRSF005784 1 175 1.3E-53 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 Gene3D G3DSA:3.20.20.20 35 103 3.5E-8 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 Gene3D G3DSA:3.30.70.20 104 170 8.1E-11 T 14-10-2018 VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 Pfam PF04060 Putative Fe-S cluster 42 74 2.5E-9 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 VEJY3_18881 a7a0c80ecc268c6dc9500c57ff642c35 175 SUPERFAMILY SSF54862 36 168 4.84E-23 T 14-10-2018 VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 SUPERFAMILY SSF52540 5 335 8.4E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 Pfam PF00437 Type II/IV secretion system protein 12 270 4.1E-47 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 Gene3D G3DSA:3.40.50.300 101 344 9.9E-102 T 14-10-2018 VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 SMART SM00382 122 247 0.0087 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_13450 18feaa7fd4701a2616f6c07a03df25bf 346 Gene3D G3DSA:3.30.450.90 1 100 1.4E-36 T 14-10-2018 VEJY3_17621 14101f6185c73275bdf24aa6c1860ed2 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.2E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.7E-30 T 14-10-2018 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 SUPERFAMILY SSF75615 109 206 3.01E-25 T 14-10-2018 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 145 5.3E-7 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Gene3D G3DSA:3.30.160.110 114 149 5.3E-14 T 14-10-2018 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Gene3D G3DSA:1.10.8.210 150 211 5.6E-10 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 SUPERFAMILY SSF51735 1 113 4.02E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Gene3D G3DSA:3.40.50.720 1 113 1.6E-34 T 14-10-2018 VEJY3_07680 d7a0a8f6601fcad9fbe0bd3b82df834b 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 199 1.1E-12 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 Gene3D G3DSA:3.30.420.10 2 159 4.2E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.2E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.2E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.2E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.2E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.2E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 SUPERFAMILY SSF53098 3 156 4.8E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.8E-62 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_04880 273e8d94c5fc7b6da837074f72dc32c3 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.956 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 PIRSF PIRSF036917 1 685 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 SUPERFAMILY SSF51445 187 655 3.15E-93 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 Pfam PF00128 Alpha amylase, catalytic domain 236 606 1.2E-52 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 SMART SM00642 203 646 1.8E-94 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 Gene3D G3DSA:3.20.20.80 430 653 4.0E-38 T 14-10-2018 VEJY3_23691 6695ecfb2975c24ffc5f017cc10e070e 687 Gene3D G3DSA:3.20.20.80 186 428 2.5E-57 T 14-10-2018 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Pfam PF07244 Surface antigen variable number repeat 103 159 3.3E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Pfam PF17243 POTRA domain TamA domain 1 26 94 1.1E-18 T 14-10-2018 IPR035243 TamA, POTRA domain 1 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Pfam PF01103 Surface antigen 264 568 6.9E-32 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Gene3D G3DSA:3.10.20.310 186 262 3.7E-18 T 14-10-2018 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Gene3D G3DSA:2.40.160.50 263 571 2.8E-97 T 14-10-2018 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Gene3D G3DSA:3.10.20.310 98 185 3.5E-27 T 14-10-2018 VEJY3_01520 d07f7f5bca96b93009eb380b642a6fea 571 Gene3D G3DSA:3.10.20.310 21 97 9.1E-22 T 14-10-2018 VEJY3_16721 a3a75c1a8a5a96f33bca45c8596019d7 467 Pfam PF13520 Amino acid permease 24 409 1.9E-39 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_16721 a3a75c1a8a5a96f33bca45c8596019d7 467 Gene3D G3DSA:1.20.1740.10 14 459 1.3E-51 T 14-10-2018 VEJY3_16721 a3a75c1a8a5a96f33bca45c8596019d7 467 PIRSF PIRSF006060 1 464 2.8E-66 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_16721 a3a75c1a8a5a96f33bca45c8596019d7 467 TIGRFAM TIGR00908 2A0305: ethanolamine permease 10 450 1.5E-145 T 14-10-2018 IPR004757 Ethanolamine permease VEJY3_16661 7ea9ce8b98ba5d9cfd06b00666dd5cc0 133 Gene3D G3DSA:3.90.1590.10 2 116 3.1E-19 T 14-10-2018 VEJY3_16661 7ea9ce8b98ba5d9cfd06b00666dd5cc0 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 4.7E-19 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_16661 7ea9ce8b98ba5d9cfd06b00666dd5cc0 133 SUPERFAMILY SSF51316 2 131 4.92E-43 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_15500 d6f6678bcb3a992f1ebf731cc6a459ee 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.955 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEJY3_15500 d6f6678bcb3a992f1ebf731cc6a459ee 211 PIRSF PIRSF003078 3 211 3.0E-61 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEJY3_15500 d6f6678bcb3a992f1ebf731cc6a459ee 211 SUPERFAMILY SSF53335 7 209 6.54E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_15500 d6f6678bcb3a992f1ebf731cc6a459ee 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 7.1E-64 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEJY3_15500 d6f6678bcb3a992f1ebf731cc6a459ee 211 Gene3D G3DSA:3.40.50.150 4 210 2.4E-69 T 14-10-2018 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 Gene3D G3DSA:1.10.357.10 2 208 3.4E-54 T 14-10-2018 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 SUPERFAMILY SSF46689 3 74 3.28E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_05940 170a8df1afc52d1860259668ee1813f8 208 SUPERFAMILY SSF48498 80 207 3.34E-42 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_03655 e93ac4d82f7997297ffbd5e7a0de8294 153 SUPERFAMILY SSF141322 113 151 1.2E-5 T 14-10-2018 VEJY3_03655 e93ac4d82f7997297ffbd5e7a0de8294 153 Gene3D G3DSA:2.40.50.140 82 153 3.8E-10 T 14-10-2018 VEJY3_03655 e93ac4d82f7997297ffbd5e7a0de8294 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 8.0E-25 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VEJY3_12005 8503b7e3afcba9f7f5f23b1dc740a9ed 217 Gene3D G3DSA:3.30.420.10 7 216 1.4E-79 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_12005 8503b7e3afcba9f7f5f23b1dc740a9ed 217 Pfam PF01351 Ribonuclease HII 32 208 1.2E-38 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain VEJY3_12005 8503b7e3afcba9f7f5f23b1dc740a9ed 217 Hamap MF_00052_B Ribonuclease HII [rnhB]. 30 209 37.964 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 VEJY3_12005 8503b7e3afcba9f7f5f23b1dc740a9ed 217 SUPERFAMILY SSF53098 24 214 8.5E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 27.825 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 Pfam PF02107 Flagellar L-ring protein 79 256 9.9E-57 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 8.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 8.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 8.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 PRINTS PR01008 Flagellar L-ring protein signature 101 113 8.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_03575 0e787ef25f1e74ad3fc85ea5397c3040 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 8.9E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEJY3_20371 581fe374fcef538dfa81217393cd31d5 229 Gene3D G3DSA:3.90.1340.10 27 88 3.6E-13 T 14-10-2018 IPR037053 Phage tail collar domain superfamily VEJY3_20371 581fe374fcef538dfa81217393cd31d5 229 Pfam PF07484 Phage Tail Collar Domain 36 91 6.0E-23 T 14-10-2018 IPR011083 Phage tail collar domain VEJY3_20371 581fe374fcef538dfa81217393cd31d5 229 SUPERFAMILY SSF88874 34 223 6.02E-40 T 14-10-2018 VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 SUPERFAMILY SSF52540 352 512 3.68E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 Pfam PF00005 ABC transporter 29 170 3.0E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 SUPERFAMILY SSF52540 3 240 3.17E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 Gene3D G3DSA:3.40.50.300 2 267 3.4E-39 T 14-10-2018 VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 Pfam PF00005 ABC transporter 352 480 1.9E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 SMART SM00382 28 212 7.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 SMART SM00382 360 522 2.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20766 7ed88de19777fb5715a7d6b77650e1f9 522 Gene3D G3DSA:3.40.50.300 283 520 1.2E-33 T 14-10-2018 VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 SUPERFAMILY SSF53697 11 316 6.01E-69 T 14-10-2018 VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 SMART SM00116 210 258 0.67 T 14-10-2018 IPR000644 CBS domain VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 SMART SM00116 275 322 2.0 T 14-10-2018 IPR000644 CBS domain VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 Gene3D G3DSA:3.10.580.10 196 320 2.5E-43 T 14-10-2018 VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 Pfam PF00571 CBS domain 211 258 1.3E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 Pfam PF00571 CBS domain 268 320 1.6E-6 T 14-10-2018 IPR000644 CBS domain VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 Pfam PF01380 SIS domain 41 172 2.5E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 Gene3D G3DSA:3.40.50.10490 5 195 1.1E-64 T 14-10-2018 VEJY3_13675 f2015dbd8d4dbaf6feec28b51e36511e 323 PIRSF PIRSF004692 1 323 7.4E-131 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VEJY3_23291 65d44e51e07727ca05a4d145002c5ec4 318 SUPERFAMILY SSF52540 6 290 4.87E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23291 65d44e51e07727ca05a4d145002c5ec4 318 Gene3D G3DSA:3.40.50.300 17 183 3.0E-46 T 14-10-2018 VEJY3_23291 65d44e51e07727ca05a4d145002c5ec4 318 Gene3D G3DSA:1.10.8.300 199 315 2.3E-39 T 14-10-2018 VEJY3_23291 65d44e51e07727ca05a4d145002c5ec4 318 PIRSF PIRSF002849 1 318 2.9E-128 T 14-10-2018 VEJY3_23291 65d44e51e07727ca05a4d145002c5ec4 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 Gene3D G3DSA:2.40.50.140 286 332 5.5E-15 T 14-10-2018 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 Gene3D G3DSA:2.40.50.940 226 285 5.5E-15 T 14-10-2018 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 SMART SM00382 32 215 1.6E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 SUPERFAMILY SSF50331 240 357 5.44E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 Gene3D G3DSA:3.40.50.300 7 225 3.3E-69 T 14-10-2018 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 Pfam PF08402 TOBE domain 279 352 2.9E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 Pfam PF00005 ABC transporter 23 165 2.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16576 9b4a66440089bf12b103bc3db9ef58ca 372 SUPERFAMILY SSF52540 8 247 1.69E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 SUPERFAMILY SSF53850 6 220 8.9E-86 T 14-10-2018 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.2E-79 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Gene3D G3DSA:3.40.190.10 104 203 2.6E-85 T 14-10-2018 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 6.8E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 6.8E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 6.8E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 6.8E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 6.8E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 PIRSF PIRSF001438 1 312 4.4E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Gene3D G3DSA:3.30.160.40 222 307 3.7E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Gene3D G3DSA:3.40.190.10 7 211 2.6E-85 T 14-10-2018 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 SUPERFAMILY SSF54782 221 310 2.48E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.2E-19 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15075 38bb236b30fe83a4af331cb92e894c90 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.158 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 636 653 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 SUPERFAMILY SSF56935 37 653 2.17E-135 T 14-10-2018 VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 6.2E-29 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 Pfam PF00593 TonB dependent receptor 275 651 2.0E-60 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 Gene3D G3DSA:2.40.170.20 172 653 6.9E-111 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_04100 5b6ca463b9e2f2e996a15b631b53ab8a 653 Gene3D G3DSA:2.170.130.10 34 165 7.4E-43 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_01150 d61268de919dfaef40a3edb730cbd413 243 Pfam PF00534 Glycosyl transferases group 1 57 209 3.3E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_01150 d61268de919dfaef40a3edb730cbd413 243 SUPERFAMILY SSF53756 4 241 1.15E-44 T 14-10-2018 VEJY3_01150 d61268de919dfaef40a3edb730cbd413 243 Gene3D G3DSA:3.40.50.2000 47 229 2.6E-34 T 14-10-2018 VEJY3_15230 2aae080f52afca0f13870801d249bc0a 255 Gene3D G3DSA:3.20.20.70 1 253 6.1E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_15230 2aae080f52afca0f13870801d249bc0a 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.5E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VEJY3_15230 2aae080f52afca0f13870801d249bc0a 255 SUPERFAMILY SSF110399 1 236 5.62E-87 T 14-10-2018 VEJY3_15230 2aae080f52afca0f13870801d249bc0a 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.315 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 SMART SM00530 25 80 4.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 SUPERFAMILY SSF47413 19 83 6.7E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 Pfam PF07883 Cupin domain 125 193 3.8E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 Gene3D G3DSA:1.10.260.40 17 97 1.3E-16 T 14-10-2018 VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 SUPERFAMILY SSF51182 34 192 3.16E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 Pfam PF01381 Helix-turn-helix 26 79 2.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20946 014d825cd3af32f07eadfb64c4f01c3d 200 Gene3D G3DSA:2.60.120.10 110 199 2.6E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 6.6E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 611 33.295 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 Pfam PF00593 TonB dependent receptor 191 609 9.0E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 594 611 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 SUPERFAMILY SSF56935 29 611 1.75E-107 T 14-10-2018 VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 Gene3D G3DSA:2.40.170.20 156 611 3.3E-117 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_14850 ca7c08eb31d8bc7635d3b3de8537e318 611 Gene3D G3DSA:2.170.130.10 24 153 2.1E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_02880 20d8197092b18d6616f86b6db766fd84 280 Gene3D G3DSA:3.20.20.70 5 277 3.9E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02880 20d8197092b18d6616f86b6db766fd84 280 Pfam PF05853 beta-keto acid cleavage enzyme 12 275 7.6E-52 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 VEJY3_10315 a3ff30792bc86ba622c2463d4516fda5 187 Pfam PF04279 Intracellular septation protein A 1 174 1.4E-68 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VEJY3_10315 a3ff30792bc86ba622c2463d4516fda5 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.397 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VEJY3_20421 07d759ee8868a86af62fb2f9c71f65e7 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEJY3_20421 07d759ee8868a86af62fb2f9c71f65e7 190 Pfam PF00775 Dioxygenase 32 156 6.4E-23 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEJY3_20421 07d759ee8868a86af62fb2f9c71f65e7 190 SUPERFAMILY SSF49482 6 161 4.32E-47 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEJY3_20421 07d759ee8868a86af62fb2f9c71f65e7 190 Gene3D G3DSA:2.60.130.10 18 164 1.4E-43 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.555 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 SUPERFAMILY SSF52540 243 664 3.83E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 2.1E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 SUPERFAMILY SSF52540 14 666 1.3E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 Pfam PF13307 Helicase C-terminal domain 526 684 6.4E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 SMART SM00491 535 671 2.7E-27 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 Gene3D G3DSA:3.40.50.300 25 305 3.5E-40 T 14-10-2018 VEJY3_04680 16e186aa77fb3cb641de22898918f636 691 Gene3D G3DSA:3.40.50.300 500 689 3.0E-33 T 14-10-2018 VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 147 7.8E-21 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 Pfam PF06445 GyrI-like small molecule binding domain 162 306 1.7E-13 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 SUPERFAMILY SSF55136 161 298 2.54E-16 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 SUPERFAMILY SSF55961 4 147 1.12E-14 T 14-10-2018 VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 SMART SM00871 156 309 8.4E-8 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 Gene3D G3DSA:3.20.80.10 153 307 2.0E-22 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEJY3_20286 a32389b570c81bd2c29e0f310089382d 309 Gene3D G3DSA:3.30.530.20 3 151 1.1E-15 T 14-10-2018 IPR023393 START-like domain superfamily VEJY3_17416 eba2510db46fa48ff908473e678b35b6 148 Pfam PF11911 Protein of unknown function (DUF3429) 6 146 1.0E-26 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 VEJY3_21626 b9a509a9db773133a3e107e4073e5f9e 249 Pfam PF00430 ATP synthase B/B' CF(0) 7 137 6.7E-14 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEJY3_21626 b9a509a9db773133a3e107e4073e5f9e 249 Pfam PF00213 ATP synthase delta (OSCP) subunit 179 239 6.3E-6 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21626 b9a509a9db773133a3e107e4073e5f9e 249 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 10.059 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEJY3_02920 4f6fdfa6c95f7934733930070e9e9b74 107 Gene3D G3DSA:3.30.70.100 2 100 4.0E-40 T 14-10-2018 VEJY3_02920 4f6fdfa6c95f7934733930070e9e9b74 107 SUPERFAMILY SSF54909 5 106 3.97E-39 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_02920 4f6fdfa6c95f7934733930070e9e9b74 107 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 4 107 32.35 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 VEJY3_02920 4f6fdfa6c95f7934733930070e9e9b74 107 Pfam PF05336 L-rhamnose mutarotase 6 106 3.9E-30 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 Pfam PF00230 Major intrinsic protein 2 222 4.1E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 Gene3D G3DSA:1.20.1080.10 1 229 1.6E-85 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 34.991 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VEJY3_11205 3b90658ce67a7973cfeb32d93a7fbec2 232 SUPERFAMILY SSF81338 2 226 9.94E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.9E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 SMART SM00829 14 340 3.1E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 Gene3D G3DSA:3.90.180.10 22 330 2.1E-120 T 14-10-2018 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 SUPERFAMILY SSF50129 3 175 2.59E-53 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 61.142 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 SUPERFAMILY SSF51735 143 307 2.99E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_23506 84bbf2dbfe95b919ff473ca62dc770ad 343 Gene3D G3DSA:3.40.50.720 155 288 2.1E-120 T 14-10-2018 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 PIRSF PIRSF006641 1 363 2.1E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Gene3D G3DSA:3.40.50.300 4 278 1.7E-150 T 14-10-2018 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 6.2E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 SUPERFAMILY SSF52540 3 301 9.25E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Gene3D G3DSA:3.10.20.30 48 361 1.7E-150 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Gene3D G3DSA:1.10.150.300 113 200 1.7E-150 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 SUPERFAMILY SSF81271 279 360 3.27E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.177 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VEJY3_03385 45835849f9fb7c3bca56a6b01dac2595 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 PRINTS PR01035 Tetracycline resistance protein signature 40 59 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 PRINTS PR01035 Tetracycline resistance protein signature 10 26 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 Gene3D G3DSA:1.20.1250.20 3 378 4.6E-52 T 14-10-2018 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 Pfam PF07690 Major Facilitator Superfamily 9 319 5.7E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_16981 8e60b05b7d0eb0dc7a36f2086abd0751 399 SUPERFAMILY SSF103473 3 381 2.09E-64 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 SMART SM00363 7 65 2.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 Gene3D G3DSA:3.30.70.1560 132 205 1.1E-53 T 14-10-2018 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 SUPERFAMILY SSF55120 66 227 3.45E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 Gene3D G3DSA:3.10.290.10 1 61 7.0E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 Pfam PF01479 S4 domain 8 52 4.1E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 Gene3D G3DSA:3.30.70.580 68 227 1.1E-53 T 14-10-2018 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 SUPERFAMILY SSF55174 7 97 7.57E-15 T 14-10-2018 VEJY3_03450 b25900c722c6a47b10d54777e0f78e93 358 Pfam PF00849 RNA pseudouridylate synthase 67 193 9.8E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_21286 ff1f413ce75d429328539bc55d27c95d 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.5E-14 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 Pfam PF01479 S4 domain 18 65 1.0E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 Gene3D G3DSA:3.30.2350.10 85 316 7.4E-73 T 14-10-2018 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 SUPERFAMILY SSF55174 17 68 2.19E-11 T 14-10-2018 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 Gene3D G3DSA:3.10.290.10 2 76 2.6E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 3.1E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 SMART SM00363 18 83 1.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_02525 923dedf65492b8be8799fdb14432020c 325 SUPERFAMILY SSF55120 77 316 3.08E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 396 2.2E-61 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 445 269.514 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 SUPERFAMILY SSF53686 74 435 5.35E-54 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 Gene3D G3DSA:3.40.50.1100 116 238 2.2E-195 T 14-10-2018 VEJY3_06025 fe258010725a4c94e5056df489fbc2c4 445 Gene3D G3DSA:3.40.50.1100 23 438 2.2E-195 T 14-10-2018 VEJY3_23306 01f27ace8a923e014d701c5d500756a2 334 Pfam PF00092 von Willebrand factor type A domain 98 290 3.6E-32 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_23306 01f27ace8a923e014d701c5d500756a2 334 SMART SM00327 96 297 1.6E-20 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_23306 01f27ace8a923e014d701c5d500756a2 334 SUPERFAMILY SSF53300 94 293 1.63E-39 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_23306 01f27ace8a923e014d701c5d500756a2 334 Gene3D G3DSA:3.40.50.410 96 297 7.7E-60 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_01750 1f7bf5a2d45d955fdbd270e83c151c24 458 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_01750 1f7bf5a2d45d955fdbd270e83c151c24 458 Pfam PF00367 phosphotransferase system, EIIB 17 46 5.2E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_01750 1f7bf5a2d45d955fdbd270e83c151c24 458 Gene3D G3DSA:3.30.1360.60 4 82 1.8E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_01750 1f7bf5a2d45d955fdbd270e83c151c24 458 Pfam PF02378 Phosphotransferase system, EIIC 116 390 9.1E-25 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_01750 1f7bf5a2d45d955fdbd270e83c151c24 458 SUPERFAMILY SSF55604 12 82 1.44E-16 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 SMART SM00460 172 248 1.6E-20 T 14-10-2018 IPR002931 Transglutaminase-like VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 Pfam PF01841 Transglutaminase-like superfamily 132 246 5.3E-17 T 14-10-2018 IPR002931 Transglutaminase-like VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 Gene3D G3DSA:3.10.620.30 95 281 4.6E-28 T 14-10-2018 VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 7.9E-27 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1108 0.0 T 14-10-2018 IPR018667 Domain of unknown function DUF2126 VEJY3_10445 8ef5e4db3104567a7083df94e0e47e80 1115 SUPERFAMILY SSF54001 9 337 2.52E-73 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 SUPERFAMILY SSF55904 620 756 4.71E-34 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Gene3D G3DSA:3.90.1150.10 451 640 1.4E-74 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 SUPERFAMILY SSF53383 149 617 1.21E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 29 143 1.7E-20 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 PIRSF PIRSF009393 8 764 2.1E-256 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 600 1.9E-166 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 391 405 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 625 754 1.2E-44 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Gene3D G3DSA:3.40.50.2300 11 148 9.1E-37 T 14-10-2018 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Gene3D G3DSA:3.40.640.10 149 450 2.7E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_22706 032965cf9640bfdeb4183f09c24c6b87 764 Gene3D G3DSA:3.90.100.10 641 764 3.8E-45 T 14-10-2018 VEJY3_05815 28f5770123b61b9e24514036cc9d9737 381 Gene3D G3DSA:3.40.190.10 153 379 3.4E-17 T 14-10-2018 VEJY3_05815 28f5770123b61b9e24514036cc9d9737 381 Gene3D G3DSA:3.40.190.10 69 353 3.4E-17 T 14-10-2018 VEJY3_05815 28f5770123b61b9e24514036cc9d9737 381 SUPERFAMILY SSF53850 33 379 5.2E-42 T 14-10-2018 VEJY3_05815 28f5770123b61b9e24514036cc9d9737 381 PIRSF PIRSF029172 1 381 3.7E-177 T 14-10-2018 IPR027020 Protein ynjB VEJY3_05815 28f5770123b61b9e24514036cc9d9737 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 348 6.3E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_04675 be39c388b7944c3199b7155cf9498e6c 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 3.5E-45 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_16381 8ed254ce4e7fb2e53b59274c46d73a44 420 Pfam PF05525 Branched-chain amino acid transport protein 1 405 1.2E-109 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEJY3_23551 5f52419f5dd1e9865ef82ab6e5ecf695 227 Pfam PF06468 Spondin_N 40 157 4.0E-11 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEJY3_23551 5f52419f5dd1e9865ef82ab6e5ecf695 227 Gene3D G3DSA:2.60.40.2130 17 168 7.0E-14 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEJY3_12315 a90605fc0f847a3373e94ade02f5ac5c 269 SUPERFAMILY SSF69572 9 268 1.96E-64 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEJY3_12315 a90605fc0f847a3373e94ade02f5ac5c 269 Pfam PF00899 ThiF family 23 195 3.9E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEJY3_12315 a90605fc0f847a3373e94ade02f5ac5c 269 Gene3D G3DSA:3.40.50.720 5 269 7.3E-110 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Pfam PF13437 HlyD family secretion protein 292 408 1.4E-20 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Gene3D G3DSA:1.10.287.470 187 292 2.0E-21 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Gene3D G3DSA:1.10.287.470 102 169 3.6E-6 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Gene3D G3DSA:2.40.50.100 71 173 3.6E-6 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 37 60 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.8E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Pfam PF13533 Biotin-lipoyl like 71 105 5.5E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Gene3D G3DSA:2.40.50.100 293 329 2.0E-21 T 14-10-2018 VEJY3_18186 e06db5080346305cd5cb9146134d89a0 441 Gene3D G3DSA:2.40.30.170 330 418 2.0E-21 T 14-10-2018 VEJY3_01780 b3e89481103a4227cab30009aef76503 452 Pfam PF01979 Amidohydrolase family 55 420 2.6E-62 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_01780 b3e89481103a4227cab30009aef76503 452 SUPERFAMILY SSF51338 4 447 3.87E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_01780 b3e89481103a4227cab30009aef76503 452 Gene3D G3DSA:2.30.40.10 21 421 1.7E-120 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_01780 b3e89481103a4227cab30009aef76503 452 SUPERFAMILY SSF51556 58 372 5.9E-93 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_01780 b3e89481103a4227cab30009aef76503 452 Gene3D G3DSA:3.20.20.140 59 373 1.7E-120 T 14-10-2018 VEJY3_22586 9f49a937401af09d3d1504c4f1dfb2e7 413 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 47 406 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_22586 9f49a937401af09d3d1504c4f1dfb2e7 413 Pfam PF02264 LamB porin 31 413 5.4E-85 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_22586 9f49a937401af09d3d1504c4f1dfb2e7 413 Gene3D G3DSA:2.40.170.10 28 413 3.1E-94 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEJY3_22586 9f49a937401af09d3d1504c4f1dfb2e7 413 SUPERFAMILY SSF56935 28 413 9.77E-95 T 14-10-2018 VEJY3_10615 575769f486a9c49c96ad0bfeb499a004 196 SUPERFAMILY SSF56925 24 196 9.94E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_10615 575769f486a9c49c96ad0bfeb499a004 196 Gene3D G3DSA:2.40.160.20 26 196 3.8E-10 T 14-10-2018 VEJY3_10615 575769f486a9c49c96ad0bfeb499a004 196 Pfam PF01389 OmpA-like transmembrane domain 31 196 4.0E-5 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEJY3_18621 01edc8bd4362f9bb7c69991102ffaebe 459 SUPERFAMILY SSF141322 387 453 6.8E-9 T 14-10-2018 VEJY3_18621 01edc8bd4362f9bb7c69991102ffaebe 459 Gene3D G3DSA:3.90.226.10 16 266 1.9E-61 T 14-10-2018 VEJY3_18621 01edc8bd4362f9bb7c69991102ffaebe 459 Gene3D G3DSA:2.40.50.140 390 459 2.3E-13 T 14-10-2018 VEJY3_18621 01edc8bd4362f9bb7c69991102ffaebe 459 Pfam PF01957 NfeD-like C-terminal, partner-binding 315 454 2.3E-35 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VEJY3_18621 01edc8bd4362f9bb7c69991102ffaebe 459 SUPERFAMILY SSF52096 4 216 1.81E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20891 0b1abc2670cf8bd732c709496af81291 292 SUPERFAMILY SSF52402 152 286 9.21E-12 T 14-10-2018 VEJY3_20891 0b1abc2670cf8bd732c709496af81291 292 Pfam PF00582 Universal stress protein family 196 285 7.5E-7 T 14-10-2018 IPR006016 UspA VEJY3_20891 0b1abc2670cf8bd732c709496af81291 292 Gene3D G3DSA:3.40.50.12370 47 291 6.4E-23 T 14-10-2018 VEJY3_22171 0987d4b028688f9ec2c96f0e8aa7d408 179 SUPERFAMILY SSF55729 2 164 5.32E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_22171 0987d4b028688f9ec2c96f0e8aa7d408 179 Gene3D G3DSA:3.40.630.30 5 173 1.1E-49 T 14-10-2018 VEJY3_22171 0987d4b028688f9ec2c96f0e8aa7d408 179 Pfam PF13302 Acetyltransferase (GNAT) domain 6 139 2.1E-19 T 14-10-2018 IPR000182 GNAT domain VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 SUPERFAMILY SSF52540 3 235 1.11E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 Gene3D G3DSA:3.40.50.300 1 242 1.7E-70 T 14-10-2018 VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 Pfam PF00005 ABC transporter 18 170 6.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 SMART SM00382 27 218 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_20501 6983dd58832d3a23be95e90486e697f4 242 PIRSF PIRSF039085 1 242 3.4E-91 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_03685 77aee776ed8dd92d5d805682da8263c7 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 5.1E-70 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 Pfam PF00005 ABC transporter 19 167 9.1E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 Gene3D G3DSA:3.40.50.300 1 242 9.8E-77 T 14-10-2018 VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 PIRSF PIRSF039085 1 242 5.0E-112 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 SUPERFAMILY SSF52540 3 236 1.15E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_19316 9989d1233b7f778c0473b747e268d921 242 SMART SM00382 28 215 1.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_09895 e15f2f698995664f1be9116edcce5607 196 SUPERFAMILY SSF54060 73 159 1.29E-7 T 14-10-2018 VEJY3_09895 e15f2f698995664f1be9116edcce5607 196 Pfam PF13392 HNH endonuclease 114 161 3.0E-8 T 14-10-2018 IPR003615 HNH nuclease VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 1.1E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VEJY3_12885 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEJY3_04870 77b1b5230315b2159da82d437284de3a 288 Gene3D G3DSA:3.20.20.410 2 273 1.7E-46 T 14-10-2018 IPR036520 UPF0759 superfamily VEJY3_04870 77b1b5230315b2159da82d437284de3a 288 Pfam PF01904 Protein of unknown function DUF72 23 261 4.2E-57 T 14-10-2018 IPR002763 Protein of unknown function DUF72 VEJY3_04870 77b1b5230315b2159da82d437284de3a 288 SUPERFAMILY SSF117396 5 265 1.14E-72 T 14-10-2018 IPR036520 UPF0759 superfamily VEJY3_16401 d46722302ec0dfbf27798379b1d0e33b 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 7.2E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEJY3_16401 d46722302ec0dfbf27798379b1d0e33b 402 Pfam PF07670 Nucleoside recognition 90 185 3.3E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEJY3_16401 d46722302ec0dfbf27798379b1d0e33b 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.0E-23 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 Gene3D G3DSA:3.30.1330.60 72 206 3.4E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 PRINTS PR01021 OMPA domain signature 103 125 6.3E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 PRINTS PR01021 OMPA domain signature 148 164 6.3E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 PRINTS PR01021 OMPA domain signature 133 148 6.3E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 Pfam PF00691 OmpA family 103 197 1.5E-17 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_21911 774398c6598d240c673ae5bd96338f3f 207 SUPERFAMILY SSF103088 91 203 2.88E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_11065 34701e8153a1bb3b3fe30b71b4e6001e 285 SUPERFAMILY SSF81345 4 281 6.54E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_11065 34701e8153a1bb3b3fe30b71b4e6001e 285 Pfam PF01032 FecCD transport family 2 281 6.6E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_11065 34701e8153a1bb3b3fe30b71b4e6001e 285 Gene3D G3DSA:1.10.3470.10 1 285 7.3E-88 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 Gene3D G3DSA:3.40.50.720 27 317 1.4E-111 T 14-10-2018 VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 320 6.4E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 Gene3D G3DSA:3.40.50.720 99 288 1.4E-111 T 14-10-2018 VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 7.2E-57 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 SUPERFAMILY SSF51735 103 290 9.44E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_13735 8f2822a3db593b85d5b8ffb9d28bcc89 320 SUPERFAMILY SSF52283 4 139 9.14E-32 T 14-10-2018 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 Pfam PF00005 ABC transporter 363 511 5.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 Gene3D G3DSA:3.40.50.300 336 584 3.9E-94 T 14-10-2018 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 SUPERFAMILY SSF52540 337 582 7.1E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 SUPERFAMILY SSF90123 15 326 2.88E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 Pfam PF00664 ABC transporter transmembrane region 28 291 1.4E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 Gene3D G3DSA:1.20.1560.10 9 332 1.7E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_22496 ef7327928249100fa4cd879b5d54eff2 586 SMART SM00382 371 563 2.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12450 2a6162610fb50f10e6c800973874ce90 411 Pfam PF04932 O-Antigen ligase 197 340 3.0E-20 T 14-10-2018 IPR007016 O-antigen ligase-related VEJY3_22731 a294bc20f862f20075a74ec5970ded13 312 Gene3D G3DSA:1.20.1510.10 9 222 2.3E-11 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_22731 a294bc20f862f20075a74ec5970ded13 312 SUPERFAMILY SSF161111 9 222 6.28E-20 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_22731 a294bc20f862f20075a74ec5970ded13 312 Pfam PF01545 Cation efflux family 15 222 6.5E-20 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEJY3_14155 fcc4dd6018f9d745d3f450dbf18f5151 61 Gene3D G3DSA:1.10.10.1100 1 58 1.1E-18 T 14-10-2018 VEJY3_14155 fcc4dd6018f9d745d3f450dbf18f5151 61 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 52 9.4E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 14-10-2018 VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 14-10-2018 VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.230.10 75 167 5.0E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_01365 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VEJY3_18376 16830e4fa6b6f20ac648f7a6bb9a968d 123 Pfam PF08883 Dopa 4,5-dioxygenase family 14 113 3.5E-30 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VEJY3_18376 16830e4fa6b6f20ac648f7a6bb9a968d 123 SUPERFAMILY SSF143410 6 115 6.41E-41 T 14-10-2018 IPR023389 DOPA-like superfamily VEJY3_18376 16830e4fa6b6f20ac648f7a6bb9a968d 123 Gene3D G3DSA:3.30.70.1240 4 123 8.2E-38 T 14-10-2018 IPR023389 DOPA-like superfamily VEJY3_18376 16830e4fa6b6f20ac648f7a6bb9a968d 123 PIRSF PIRSF028139 4 117 1.2E-40 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 Gene3D G3DSA:2.60.420.10 721 801 2.1E-29 T 14-10-2018 VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.9E-210 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 Gene3D G3DSA:1.50.10.10 311 720 6.0E-135 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 SUPERFAMILY SSF74650 1 269 4.71E-83 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 SMART SM01068 1 63 2.3E-20 T 14-10-2018 IPR009342 Putative carbohydrate binding domain VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 Gene3D G3DSA:2.70.98.40 1 302 3.4E-116 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 SUPERFAMILY SSF48208 274 801 1.29E-109 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEJY3_12855 f44837bfc2d91859ad208f8ed0e99bf3 802 Pfam PF06165 Glycosyltransferase family 36 21 267 6.6E-85 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 VEJY3_22236 81adc4e81ef104eacdad8870477d133e 186 SUPERFAMILY SSF52218 2 161 1.66E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_22236 81adc4e81ef104eacdad8870477d133e 186 Gene3D G3DSA:3.40.50.360 1 162 5.6E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_22236 81adc4e81ef104eacdad8870477d133e 186 Pfam PF02525 Flavodoxin-like fold 6 154 2.1E-38 T 14-10-2018 IPR003680 Flavodoxin-like fold VEJY3_19986 195f4cbaa39b86b8bdc5b700ca2425ff 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 1.9E-127 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VEJY3_19986 195f4cbaa39b86b8bdc5b700ca2425ff 802 SUPERFAMILY SSF53474 441 723 6.91E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_10535 03709bad3c16109dfc66864baa5c27fa 612 Gene3D G3DSA:3.40.190.10 24 328 7.7E-46 T 14-10-2018 VEJY3_10535 03709bad3c16109dfc66864baa5c27fa 612 SUPERFAMILY SSF53850 45 566 9.77E-93 T 14-10-2018 VEJY3_10535 03709bad3c16109dfc66864baa5c27fa 612 Gene3D G3DSA:3.10.105.10 329 545 8.9E-40 T 14-10-2018 VEJY3_10535 03709bad3c16109dfc66864baa5c27fa 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 490 1.3E-60 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_10535 03709bad3c16109dfc66864baa5c27fa 612 PIRSF PIRSF002741 3 573 5.4E-65 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Gene3D G3DSA:3.40.50.1100 62 158 2.0E-135 T 14-10-2018 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.6E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 4.7E-27 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 5.2E-85 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Gene3D G3DSA:3.40.50.1100 26 328 2.0E-135 T 14-10-2018 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 Gene3D G3DSA:3.40.1020.10 339 515 3.1E-72 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 SUPERFAMILY SSF55021 421 514 5.95E-27 T 14-10-2018 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 SUPERFAMILY SSF55021 338 424 1.33E-27 T 14-10-2018 VEJY3_15415 690e6c304492ee07b9c4415af4386ea7 515 SUPERFAMILY SSF53686 16 366 1.03E-108 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 1.3E-130 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 PIRSF PIRSF000429 1 392 1.5E-111 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 8.0E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 Gene3D G3DSA:3.40.47.10 127 389 2.5E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 SUPERFAMILY SSF53901 5 268 5.02E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 3.6E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 SUPERFAMILY SSF53901 270 390 7.92E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_18551 a3080bdefdcf57db5d98d09567adf256 392 Gene3D G3DSA:3.40.47.10 7 275 2.5E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_09680 255de930c2ade7e77863e0aacb598d6c 635 Pfam PF01757 Acyltransferase family 4 316 4.2E-29 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEJY3_03090 510db88fc5c67be1afa017ba4f25e488 429 PIRSF PIRSF005353 1 429 1.7E-188 T 14-10-2018 IPR026033 Purine permease PbuG-like VEJY3_03090 510db88fc5c67be1afa017ba4f25e488 429 Pfam PF00860 Permease family 17 391 8.5E-58 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 SUPERFAMILY SSF159894 5 103 2.62E-31 T 14-10-2018 VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 Pfam PF04994 TfoX C-terminal domain 115 194 2.7E-32 T 14-10-2018 IPR007077 TfoX, C-terminal VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 Gene3D G3DSA:1.10.150.20 115 196 4.6E-24 T 14-10-2018 VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 PIRSF PIRSF028788 1 196 1.2E-50 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 Pfam PF04993 TfoX N-terminal domain 12 103 2.2E-31 T 14-10-2018 IPR007076 TfoX, N-terminal VEJY3_04780 72c95deb5a9bba7d23a89292510bf635 196 Gene3D G3DSA:3.30.1460.30 1 105 1.2E-38 T 14-10-2018 VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 Gene3D G3DSA:1.10.10.10 12 100 4.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 SUPERFAMILY SSF46785 13 121 2.56E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 SUPERFAMILY SSF53850 98 308 1.07E-31 T 14-10-2018 VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 Pfam PF03466 LysR substrate binding domain 97 303 1.1E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 Gene3D G3DSA:3.40.190.290 101 304 4.5E-45 T 14-10-2018 VEJY3_19281 468b245525a595249ef139c5fd61a2e1 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 2.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15951 58f58fb6b00f1c6bec073cfd4722eb33 285 Pfam PF12146 Serine aminopeptidase, S33 83 189 1.6E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VEJY3_15951 58f58fb6b00f1c6bec073cfd4722eb33 285 SUPERFAMILY SSF53474 35 272 2.32E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_15951 58f58fb6b00f1c6bec073cfd4722eb33 285 Gene3D G3DSA:3.40.50.1820 71 282 2.3E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_18991 5d3496a7676e9bb8d4a620d9c0b13e61 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS VEJY3_18991 5d3496a7676e9bb8d4a620d9c0b13e61 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 3.4E-22 T 14-10-2018 VEJY3_18991 5d3496a7676e9bb8d4a620d9c0b13e61 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.9E-243 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VEJY3_18991 5d3496a7676e9bb8d4a620d9c0b13e61 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 7.6E-115 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 SUPERFAMILY SSF52833 3 241 7.24E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 Gene3D G3DSA:3.40.30.10 4 165 1.7E-64 T 14-10-2018 VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 Gene3D G3DSA:3.40.30.10 171 241 3.1E-22 T 14-10-2018 VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 Pfam PF00462 Glutaredoxin 173 231 2.2E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 Pfam PF08534 Redoxin 5 160 4.1E-35 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 PRINTS PR00160 Glutaredoxin signature 173 191 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 PRINTS PR00160 Glutaredoxin signature 214 227 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_14085 e3982cbe486128b402bb5b4dc36bf433 242 PRINTS PR00160 Glutaredoxin signature 228 241 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 SUPERFAMILY SSF50677 203 408 1.05E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 SUPERFAMILY SSF52374 4 652 4.69E-139 T 14-10-2018 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.6E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Gene3D G3DSA:3.90.740.10 195 413 5.0E-242 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.452 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 3.5E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Gene3D G3DSA:3.40.50.620 25 634 5.0E-242 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Gene3D G3DSA:1.10.730.20 645 934 6.3E-85 T 14-10-2018 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 SUPERFAMILY SSF47323 657 933 5.98E-74 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEJY3_02410 f0e1b61ee2b33d8e72f00e4c7535ff81 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 844 6.3E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEJY3_15856 fb9eb16183e4af0c2190c9000f24fe69 408 Pfam PF03616 Sodium/glutamate symporter 5 376 5.9E-151 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEJY3_15856 fb9eb16183e4af0c2190c9000f24fe69 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.839 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 Gene3D G3DSA:2.115.10.20 6 329 3.1E-119 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 394 463 9.5E-5 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 14 321 5.0E-97 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 SUPERFAMILY SSF75005 5 325 3.08E-103 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 14 27 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VEJY3_21426 a0f1a7b62543836c976def9ea7c08123 483 SMART SM00640 14 449 5.5E-109 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 SMART SM00267 154 318 1.7E-30 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 Pfam PF01590 GAF domain 28 158 1.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 Gene3D G3DSA:3.30.70.270 163 318 2.4E-40 T 14-10-2018 VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 317 1.0E-35 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 SUPERFAMILY SSF55073 169 317 9.42E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 SMART SM00065 26 168 2.7E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 SUPERFAMILY SSF55781 28 163 1.1E-25 T 14-10-2018 VEJY3_20886 8ac021e3cfddada6c5ecc789c420c553 318 Gene3D G3DSA:3.30.450.40 9 162 9.0E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_24081 c13c6d8683383ad1d42f708fe82c3591 639 Gene3D G3DSA:3.10.105.10 354 598 1.2E-40 T 14-10-2018 VEJY3_24081 c13c6d8683383ad1d42f708fe82c3591 639 Gene3D G3DSA:3.40.190.10 78 353 3.1E-38 T 14-10-2018 VEJY3_24081 c13c6d8683383ad1d42f708fe82c3591 639 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 130 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEJY3_24081 c13c6d8683383ad1d42f708fe82c3591 639 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 514 3.9E-62 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_24081 c13c6d8683383ad1d42f708fe82c3591 639 SUPERFAMILY SSF53850 85 614 1.34E-74 T 14-10-2018 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SMART SM00257 343 386 2.1E-14 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SMART SM00257 417 461 2.1E-12 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SMART SM00257 474 518 3.9E-9 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SUPERFAMILY SSF54106 472 519 9.42E-10 T 14-10-2018 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Gene3D G3DSA:3.10.350.10 472 520 1.0E-12 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Pfam PF01464 Transglycosylase SLT domain 119 226 4.6E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Gene3D G3DSA:3.10.350.10 400 470 8.7E-15 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Gene3D G3DSA:3.10.350.10 330 399 8.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SUPERFAMILY SSF53955 111 270 3.6E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Pfam PF01476 LysM domain 418 461 1.1E-10 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Pfam PF01476 LysM domain 344 386 4.3E-13 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Pfam PF01476 LysM domain 475 517 2.6E-11 T 14-10-2018 IPR018392 LysM domain VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SUPERFAMILY SSF54106 343 386 1.44E-10 T 14-10-2018 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 SUPERFAMILY SSF54106 416 461 5.23E-11 T 14-10-2018 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 133 161 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEJY3_11965 3d3a4ac93f48f75ee8b9ae68d7bc8a48 526 Gene3D G3DSA:1.10.530.10 109 261 9.9E-29 T 14-10-2018 VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 Pfam PF00581 Rhodanese-like domain 7 123 6.0E-12 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 Pfam PF00581 Rhodanese-like domain 155 267 8.1E-12 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 SUPERFAMILY SSF52821 155 275 2.1E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 Gene3D G3DSA:3.40.250.10 1 139 5.4E-37 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 SMART SM00450 152 272 6.3E-17 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 SMART SM00450 5 128 4.0E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 SUPERFAMILY SSF52821 3 137 5.76E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 ProSitePatterns PS00683 Rhodanese C-terminal signature. 256 266 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 VEJY3_17746 d34f75269ef5641f71db5a582ce85eb6 276 Gene3D G3DSA:3.40.250.10 155 276 1.0E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VEJY3_09285 723585b7cd64e385899e270afc5ad7cc 283 Pfam PF00665 Integrase core domain 121 234 5.5E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_09285 723585b7cd64e385899e270afc5ad7cc 283 Pfam PF13276 HTH-like domain 41 96 4.2E-9 T 14-10-2018 IPR025948 HTH-like domain VEJY3_09285 723585b7cd64e385899e270afc5ad7cc 283 SUPERFAMILY SSF53098 121 282 8.19E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_09285 723585b7cd64e385899e270afc5ad7cc 283 Gene3D G3DSA:3.30.420.10 118 271 5.0E-19 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_13105 6696bfee8b52054c8b8312f562930d2e 522 Gene3D G3DSA:3.30.590.20 17 522 9.2E-191 T 14-10-2018 VEJY3_13105 6696bfee8b52054c8b8312f562930d2e 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 220.096 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEJY3_13105 6696bfee8b52054c8b8312f562930d2e 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 3.6E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEJY3_13105 6696bfee8b52054c8b8312f562930d2e 522 SUPERFAMILY SSF55931 7 513 3.14E-200 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEJY3_04685 de1fa95e7413895eb3c5ec00250fc4ff 332 Gene3D G3DSA:2.40.160.10 21 332 1.4E-21 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_04685 de1fa95e7413895eb3c5ec00250fc4ff 332 Pfam PF13609 Gram-negative porin 7 313 2.1E-21 T 14-10-2018 VEJY3_04685 de1fa95e7413895eb3c5ec00250fc4ff 332 SUPERFAMILY SSF56935 23 332 7.63E-28 T 14-10-2018 VEJY3_12295 f8e47d5a274ffa56473f26cd4f37474f 199 Gene3D G3DSA:3.40.50.880 1 194 1.7E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_12295 f8e47d5a274ffa56473f26cd4f37474f 199 SUPERFAMILY SSF52317 4 190 3.57E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_12295 f8e47d5a274ffa56473f26cd4f37474f 199 Pfam PF01965 DJ-1/PfpI family 4 169 1.7E-40 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 Pfam PF00171 Aldehyde dehydrogenase family 32 487 4.3E-172 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 Gene3D G3DSA:3.40.605.10 22 486 3.8E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 Gene3D G3DSA:3.40.309.10 269 458 3.8E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_08285 e0a0bdb0440bd3202eed89cd66ec7f06 494 SUPERFAMILY SSF53720 7 491 3.53E-167 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 SUPERFAMILY SSF51735 3 229 1.95E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 Pfam PF00106 short chain dehydrogenase 4 190 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_11110 e0b4d3bfa45268783010030ec577e601 229 Gene3D G3DSA:3.40.50.720 2 229 1.1E-62 T 14-10-2018 VEJY3_22681 24d19b9caf4414f4fc229e0e77bef9fe 167 SUPERFAMILY SSF56925 23 167 3.92E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_22681 24d19b9caf4414f4fc229e0e77bef9fe 167 Pfam PF13505 Outer membrane protein beta-barrel domain 9 167 7.3E-17 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_22681 24d19b9caf4414f4fc229e0e77bef9fe 167 Gene3D G3DSA:2.40.160.20 25 167 5.3E-35 T 14-10-2018 VEJY3_22756 24d19b9caf4414f4fc229e0e77bef9fe 167 SUPERFAMILY SSF56925 23 167 3.92E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_22756 24d19b9caf4414f4fc229e0e77bef9fe 167 Pfam PF13505 Outer membrane protein beta-barrel domain 9 167 7.3E-17 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_22756 24d19b9caf4414f4fc229e0e77bef9fe 167 Gene3D G3DSA:2.40.160.20 25 167 5.3E-35 T 14-10-2018 VEJY3_18251 2a5e2d3df197640d5043b83a5fb719f7 314 Gene3D G3DSA:3.60.110.10 2 286 9.8E-91 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_18251 2a5e2d3df197640d5043b83a5fb719f7 314 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 34 49 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 VEJY3_18251 2a5e2d3df197640d5043b83a5fb719f7 314 SUPERFAMILY SSF56317 3 302 6.93E-71 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_18251 2a5e2d3df197640d5043b83a5fb719f7 314 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 162 175 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 VEJY3_18251 2a5e2d3df197640d5043b83a5fb719f7 314 Pfam PF00795 Carbon-nitrogen hydrolase 3 282 7.7E-48 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_17381 185dd2b5ef5736f3882ad20114dd7822 143 Pfam PF03733 Inner membrane component domain 4 54 6.5E-15 T 14-10-2018 IPR005185 Inner membrane component domain VEJY3_17381 185dd2b5ef5736f3882ad20114dd7822 143 Pfam PF03733 Inner membrane component domain 76 126 2.8E-18 T 14-10-2018 IPR005185 Inner membrane component domain VEJY3_17381 185dd2b5ef5736f3882ad20114dd7822 143 PIRSF PIRSF028777 1 138 6.3E-53 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VEJY3_22931 716b5a3a7973fe795c23005dc4b9a0f8 200 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 6 196 1.5E-21 T 14-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 VEJY3_22931 716b5a3a7973fe795c23005dc4b9a0f8 200 Gene3D G3DSA:3.30.70.2540 5 196 1.7E-14 T 14-10-2018 VEJY3_22931 716b5a3a7973fe795c23005dc4b9a0f8 200 Gene3D G3DSA:1.10.8.890 111 144 1.7E-14 T 14-10-2018 VEJY3_03555 ed0d0893a5eb43469be711be34b97833 235 Gene3D G3DSA:2.30.30.910 94 222 1.7E-35 T 14-10-2018 VEJY3_03555 ed0d0893a5eb43469be711be34b97833 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.1E-21 T 14-10-2018 IPR005648 Flagellar hook capping protein VEJY3_03555 ed0d0893a5eb43469be711be34b97833 235 Pfam PF13861 FlgD Tudor-like domain 93 229 5.0E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain VEJY3_03555 ed0d0893a5eb43469be711be34b97833 235 Gene3D G3DSA:2.60.40.4070 110 196 1.7E-35 T 14-10-2018 VEJY3_03555 ed0d0893a5eb43469be711be34b97833 235 Pfam PF13860 FlgD Ig-like domain 118 184 4.9E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain VEJY3_16081 26cd64c7da52ee382cb5895bc19bf59e 205 Gene3D G3DSA:3.40.50.1000 9 196 1.8E-30 T 14-10-2018 IPR023214 HAD superfamily VEJY3_16081 26cd64c7da52ee382cb5895bc19bf59e 205 SUPERFAMILY SSF56784 6 194 7.67E-22 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_16081 26cd64c7da52ee382cb5895bc19bf59e 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 5.7E-29 T 14-10-2018 VEJY3_16081 26cd64c7da52ee382cb5895bc19bf59e 205 Gene3D G3DSA:1.20.1440.100 21 93 1.8E-30 T 14-10-2018 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 SUPERFAMILY SSF46689 15 86 7.28E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 Gene3D G3DSA:1.10.10.60 3 70 8.2E-18 T 14-10-2018 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 SUPERFAMILY SSF48498 90 210 5.78E-35 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 6.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 Pfam PF08362 YcdC-like protein, C-terminal region 71 210 8.0E-42 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 VEJY3_17091 7067d7691b956ba0f512e32aafaea1a5 213 Gene3D G3DSA:1.10.357.10 71 211 1.4E-44 T 14-10-2018 VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 1.2E-17 T 14-10-2018 IPR022569 Ferredoxin, C-terminal VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 3.6E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 SUPERFAMILY SSF54862 3 101 2.16E-23 T 14-10-2018 VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 Gene3D G3DSA:3.30.70.20 2 103 3.2E-26 T 14-10-2018 VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VEJY3_04430 23de1b8c585d7b4b4b7d128b560279bd 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VEJY3_21951 12e49b96242eb46ae8ac32dc58909e2b 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 3.9E-49 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21951 12e49b96242eb46ae8ac32dc58909e2b 294 SUPERFAMILY SSF81452 4 294 1.05E-77 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21951 12e49b96242eb46ae8ac32dc58909e2b 294 Gene3D G3DSA:1.20.120.80 79 294 2.8E-62 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21951 12e49b96242eb46ae8ac32dc58909e2b 294 Gene3D G3DSA:1.10.287.70 1 78 7.4E-17 T 14-10-2018 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 Gene3D G3DSA:1.10.260.40 2 71 1.3E-12 T 14-10-2018 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 Pfam PF08447 PAS fold 105 185 1.3E-6 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 SUPERFAMILY SSF47413 3 64 8.73E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 Pfam PF01381 Helix-turn-helix 18 62 3.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 Gene3D G3DSA:3.30.450.20 91 197 6.3E-16 T 14-10-2018 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 SMART SM00530 8 62 3.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_06960 0338fdb0ae4cbfdfe7d021f147de663c 301 SUPERFAMILY SSF55785 92 194 4.19E-11 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_05975 f1889504cc47211f83938b64055e574c 548 Gene3D G3DSA:3.40.640.10 122 387 2.8E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05975 f1889504cc47211f83938b64055e574c 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 6.8E-59 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VEJY3_05975 f1889504cc47211f83938b64055e574c 548 SUPERFAMILY SSF53383 28 529 3.5E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_05975 f1889504cc47211f83938b64055e574c 548 Gene3D G3DSA:3.90.1150.170 51 523 2.8E-115 T 14-10-2018 VEJY3_22611 1ece6d88c63558faa751b03021208b97 354 Pfam PF01263 Aldose 1-epimerase 25 351 8.6E-94 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEJY3_22611 1ece6d88c63558faa751b03021208b97 354 Gene3D G3DSA:2.70.98.10 14 353 2.7E-119 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_22611 1ece6d88c63558faa751b03021208b97 354 SUPERFAMILY SSF74650 12 352 5.78E-112 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_22611 1ece6d88c63558faa751b03021208b97 354 PIRSF PIRSF005096 7 354 6.1E-117 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_22611 1ece6d88c63558faa751b03021208b97 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.1E-27 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.995 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 SUPERFAMILY SSF143034 2 63 8.24E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 Gene3D G3DSA:2.40.50.530 1 64 9.7E-19 T 14-10-2018 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.9E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.9E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEJY3_06190 267e5aad6a1add6a5bc47665b5a5bf6a 64 Pfam PF01632 Ribosomal protein L35 2 61 1.6E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_16316 2883734c1eff93db3f74a410df122ba2 327 SUPERFAMILY SSF56935 22 327 4.27E-43 T 14-10-2018 VEJY3_16316 2883734c1eff93db3f74a410df122ba2 327 Gene3D G3DSA:2.40.160.10 22 327 1.3E-43 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 SUPERFAMILY SSF100950 10 233 4.89E-76 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 38 502 3.3E-247 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 PIRSF PIRSF009451 15 504 2.0E-251 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 SUPERFAMILY SSF100950 237 502 9.77E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 Gene3D G3DSA:3.40.1080.10 3 233 2.7E-98 T 14-10-2018 VEJY3_17166 ce16bc8b7662acc38043ca0f7438fc1e 504 Gene3D G3DSA:3.40.1080.10 235 504 2.3E-120 T 14-10-2018 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 SUPERFAMILY SSF46626 30 139 1.11E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 Gene3D G3DSA:1.10.760.10 23 129 1.5E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 103 113 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 84 100 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 54 69 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 41 48 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 PRINTS PR00604 Class IA and IB cytochrome C signature 70 80 5.3E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 SUPERFAMILY SSF46626 158 218 1.61E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 Gene3D G3DSA:1.10.760.10 157 217 1.3E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_18446 a5dd4383a47d40fa08856d145cca3b49 219 Pfam PF00034 Cytochrome c 41 128 1.0E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.4E-15 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.4E-15 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.4E-15 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.318 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 1.0E-36 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 SUPERFAMILY SSF50249 6 83 3.9E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01325 e5591bb82ebd4e6a3b8d81c487ceb208 84 Gene3D G3DSA:2.40.50.140 1 84 2.2E-38 T 14-10-2018 VEJY3_19326 86b655e0250d4d79241c7936eda4d967 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 307 7.5E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_19326 86b655e0250d4d79241c7936eda4d967 312 Gene3D G3DSA:1.10.3720.10 89 310 4.9E-21 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19326 86b655e0250d4d79241c7936eda4d967 312 SUPERFAMILY SSF161098 97 294 3.38E-15 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_08390 460f37bcf58a6140b9b63c3430b4a1ed 231 SUPERFAMILY SSF53681 119 229 6.54E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_08390 460f37bcf58a6140b9b63c3430b4a1ed 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 9.2E-62 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_08390 460f37bcf58a6140b9b63c3430b4a1ed 231 Gene3D G3DSA:3.40.50.1860 4 222 3.1E-86 T 14-10-2018 VEJY3_08390 460f37bcf58a6140b9b63c3430b4a1ed 231 SUPERFAMILY SSF53681 1 116 4.32E-35 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_08390 460f37bcf58a6140b9b63c3430b4a1ed 231 Gene3D G3DSA:3.40.50.1860 104 215 3.1E-86 T 14-10-2018 VEJY3_17991 87a0ecd1404831b1472a646f230f35c6 303 SUPERFAMILY SSF103481 49 145 8.76E-9 T 14-10-2018 VEJY3_17991 87a0ecd1404831b1472a646f230f35c6 303 Pfam PF00892 EamA-like transporter family 157 293 1.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_17991 87a0ecd1404831b1472a646f230f35c6 303 Pfam PF00892 EamA-like transporter family 15 144 3.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_17991 87a0ecd1404831b1472a646f230f35c6 303 SUPERFAMILY SSF103481 219 298 1.31E-14 T 14-10-2018 VEJY3_09365 a54040fd2cc9d58c91b6c1455911125b 72 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 68 4.2E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_09365 a54040fd2cc9d58c91b6c1455911125b 72 SUPERFAMILY SSF54593 1 64 5.78E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_09365 a54040fd2cc9d58c91b6c1455911125b 72 Gene3D G3DSA:3.10.180.10 7 72 6.6E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_08045 19ce257025543760501f045bad2bcf47 552 PIRSF PIRSF005091 2 550 5.3E-99 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like VEJY3_08045 19ce257025543760501f045bad2bcf47 552 SUPERFAMILY SSF53649 189 506 5.63E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_08045 19ce257025543760501f045bad2bcf47 552 Gene3D G3DSA:3.30.1120.80 156 550 1.6E-195 T 14-10-2018 VEJY3_08045 19ce257025543760501f045bad2bcf47 552 Gene3D G3DSA:3.40.720.10 182 478 1.6E-195 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_08045 19ce257025543760501f045bad2bcf47 552 Pfam PF00884 Sulfatase 191 461 8.2E-52 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_04790 db0c2747ad32756bc1774fa6bf08ee4b 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 1.0E-35 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VEJY3_04790 db0c2747ad32756bc1774fa6bf08ee4b 215 Gene3D G3DSA:1.20.120.1820 3 126 1.6E-38 T 14-10-2018 VEJY3_04790 db0c2747ad32756bc1774fa6bf08ee4b 215 Gene3D G3DSA:1.20.1280.20 129 214 5.9E-24 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEJY3_04790 db0c2747ad32756bc1774fa6bf08ee4b 215 SUPERFAMILY SSF89155 8 212 2.88E-50 T 14-10-2018 IPR036411 TorD-like superfamily VEJY3_04790 db0c2747ad32756bc1774fa6bf08ee4b 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.661 T 14-10-2018 IPR023069 Chaperone TorD VEJY3_15991 e3a804d020f3cd8cb40f7733c682096b 264 SUPERFAMILY SSF53850 57 263 4.52E-46 T 14-10-2018 VEJY3_15991 e3a804d020f3cd8cb40f7733c682096b 264 Gene3D G3DSA:1.10.10.10 1 57 2.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15991 e3a804d020f3cd8cb40f7733c682096b 264 Pfam PF03466 LysR substrate binding domain 56 258 2.1E-44 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_15991 e3a804d020f3cd8cb40f7733c682096b 264 Gene3D G3DSA:3.40.190.290 59 259 7.7E-61 T 14-10-2018 VEJY3_15991 e3a804d020f3cd8cb40f7733c682096b 264 SUPERFAMILY SSF46785 2 80 5.58E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01830 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_04690 da7a88c160cab074b59b363e1f3cbe1f 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 31 215 2.2E-30 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEJY3_22786 a68ba2b6254caab5d2a32ce790d546dc 456 Pfam PF03315 Serine dehydratase beta chain 3 153 9.1E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEJY3_22786 a68ba2b6254caab5d2a32ce790d546dc 456 SUPERFAMILY SSF143548 16 155 2.88E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_22786 a68ba2b6254caab5d2a32ce790d546dc 456 Pfam PF03313 Serine dehydratase alpha chain 184 447 2.5E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEJY3_22786 a68ba2b6254caab5d2a32ce790d546dc 456 Gene3D G3DSA:3.30.1330.90 10 157 2.0E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 SUPERFAMILY SSF51569 1 315 1.15E-113 T 14-10-2018 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.4E-100 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.907 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 Gene3D G3DSA:3.20.20.70 2 316 1.8E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17726 2dc2ecacbe39322d6f5177121467a882 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Gene3D G3DSA:2.70.98.60 2 274 1.8E-50 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 610 690 1.7E-9 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 206 221 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 323 338 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 295 309 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 431 446 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 479 495 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 373 395 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 504 520 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 257 277 5.1E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Gene3D G3DSA:2.60.40.1180 592 705 4.8E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 PIRSF PIRSF005536 1 704 5.8E-229 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Pfam PF02065 Melibiase 256 593 3.5E-117 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 SUPERFAMILY SSF51445 290 622 6.06E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 236 7.5E-44 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 Gene3D G3DSA:3.20.20.70 275 591 5.1E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_22581 e4c9ec2756d0abfaa201ce4b576164d2 706 ProSitePatterns PS00512 Alpha-galactosidase signature. 324 339 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_19841 b9330610e9eb313382e4ae0fa1497aee 126 Pfam PF11782 Protein of unknown function (DUF3319) 1 88 3.3E-39 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 VEJY3_06500 04355fab1c8b13657a95a7fef6cf20d1 345 SUPERFAMILY SSF56529 83 339 2.75E-55 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_06500 04355fab1c8b13657a95a7fef6cf20d1 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 3.7E-39 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VEJY3_06500 04355fab1c8b13657a95a7fef6cf20d1 345 Gene3D G3DSA:3.90.850.10 1 345 1.2E-133 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_04285 c552f86ca9ac69ec34f6009c0f722e9c 477 Gene3D G3DSA:3.30.300.30 379 476 9.9E-14 T 14-10-2018 VEJY3_04285 c552f86ca9ac69ec34f6009c0f722e9c 477 SUPERFAMILY SSF56801 10 475 2.62E-87 T 14-10-2018 VEJY3_04285 c552f86ca9ac69ec34f6009c0f722e9c 477 Pfam PF00501 AMP-binding enzyme 21 382 1.8E-52 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_04285 c552f86ca9ac69ec34f6009c0f722e9c 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_04285 c552f86ca9ac69ec34f6009c0f722e9c 477 Gene3D G3DSA:3.40.50.12780 15 378 3.6E-66 T 14-10-2018 VEJY3_02570 b76b4ddb64d5bb6d30e0cc4ee3af1547 278 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 275 1.1E-93 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VEJY3_02570 b76b4ddb64d5bb6d30e0cc4ee3af1547 278 PIRSF PIRSF018455 3 278 1.9E-112 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VEJY3_02570 b76b4ddb64d5bb6d30e0cc4ee3af1547 278 SUPERFAMILY SSF55166 20 277 2.98E-96 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_02570 b76b4ddb64d5bb6d30e0cc4ee3af1547 278 Gene3D G3DSA:3.30.1380.10 19 278 7.8E-97 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 1.5E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 SMART SM00344 4 113 3.0E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 8.6E-17 T 14-10-2018 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 Gene3D G3DSA:3.30.70.920 56 148 4.8E-20 T 14-10-2018 VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 Gene3D G3DSA:1.10.10.10 1 55 2.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 SUPERFAMILY SSF46785 4 64 1.73E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20966 34a3cf523c2f80bb18ee4ee0fb933f14 153 SUPERFAMILY SSF54909 64 153 3.08E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 Gene3D G3DSA:1.10.10.10 17 86 1.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 SMART SM00421 21 78 7.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 Pfam PF00196 Bacterial regulatory proteins, luxR family 25 77 6.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 SUPERFAMILY SSF46894 15 80 1.33E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 54 66 4.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_18126 528894c227aa0d86352ef3636ae5066c 87 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 54 4.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_04475 8679207a998c79ee2352ef4071e874f9 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 3.8E-29 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 VEJY3_04475 8679207a998c79ee2352ef4071e874f9 130 Gene3D G3DSA:2.60.40.3230 18 130 1.0E-27 T 14-10-2018 IPR038483 YcfL-like superfamily VEJY3_04900 50424d5babb561510234539fad6d5aad 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.7E-168 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEJY3_04900 50424d5babb561510234539fad6d5aad 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 5.0E-106 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEJY3_04900 50424d5babb561510234539fad6d5aad 378 PIRSF PIRSF000267 2 377 7.2E-122 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEJY3_10670 72fc4de8c9f8234f88aaca9e904824fe 226 Gene3D G3DSA:3.20.10.10 67 226 1.8E-52 T 14-10-2018 VEJY3_10670 72fc4de8c9f8234f88aaca9e904824fe 226 ProSitePatterns PS00770 Aminotransferases class-IV signature. 128 157 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VEJY3_10670 72fc4de8c9f8234f88aaca9e904824fe 226 SUPERFAMILY SSF56752 2 221 8.89E-55 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VEJY3_10670 72fc4de8c9f8234f88aaca9e904824fe 226 Pfam PF01063 Amino-transferase class IV 28 202 1.3E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VEJY3_10670 72fc4de8c9f8234f88aaca9e904824fe 226 Gene3D G3DSA:3.30.470.10 1 66 1.8E-6 T 14-10-2018 VEJY3_08755 f971c39f4be2eca2f0aea941834d5da1 237 SUPERFAMILY SSF51161 120 234 6.15E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_08755 f971c39f4be2eca2f0aea941834d5da1 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_08755 f971c39f4be2eca2f0aea941834d5da1 237 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 121 150 0.05 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_08755 f971c39f4be2eca2f0aea941834d5da1 237 Gene3D G3DSA:2.160.10.10 45 236 5.0E-36 T 14-10-2018 VEJY3_08755 f971c39f4be2eca2f0aea941834d5da1 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 183 216 4.0E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_06060 8d33514e2eb403d53aca7a535fedd24d 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VEJY3_06060 8d33514e2eb403d53aca7a535fedd24d 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 3.8E-59 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEJY3_02045 462d92a888b14abc6c29f8b770cf0834 105 Pfam PF04999 Cell division protein FtsL 8 103 4.2E-36 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VEJY3_02045 462d92a888b14abc6c29f8b770cf0834 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VEJY3_16816 e74cc8bfd8bee5a1018f485a2ab3b314 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 4.2E-12 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 Gene3D G3DSA:3.40.309.10 251 438 7.0E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 Pfam PF00171 Aldehyde dehydrogenase family 12 467 4.4E-147 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 SUPERFAMILY SSF53720 2 471 1.22E-141 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 Gene3D G3DSA:3.40.605.10 8 465 7.0E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_23211 3f7e65fde5c5674c4a3f718c6ac33d74 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_10795 b4c76e74b231633510608b4c9f2517f0 487 Gene3D G3DSA:3.30.70.270 318 486 2.1E-46 T 14-10-2018 VEJY3_10795 b4c76e74b231633510608b4c9f2517f0 487 SMART SM00267 320 486 1.4E-43 T 14-10-2018 IPR000160 GGDEF domain VEJY3_10795 b4c76e74b231633510608b4c9f2517f0 487 SUPERFAMILY SSF55073 336 485 2.59E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_10795 b4c76e74b231633510608b4c9f2517f0 487 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 482 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain VEJY3_20131 3970d95dd29b8a2f18918e00b57bfef1 265 SUPERFAMILY SSF161098 59 245 2.09E-44 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20131 3970d95dd29b8a2f18918e00b57bfef1 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 1.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_20131 3970d95dd29b8a2f18918e00b57bfef1 265 Gene3D G3DSA:1.10.3720.10 50 260 3.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_06795 8b6379f5ecf8c72e37166654bec46c6c 266 SUPERFAMILY SSF56529 4 258 1.57E-80 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_06795 8b6379f5ecf8c72e37166654bec46c6c 266 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 255 2.1E-20 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VEJY3_06795 8b6379f5ecf8c72e37166654bec46c6c 266 Gene3D G3DSA:3.90.850.10 1 264 6.6E-90 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_20786 8408ea13d921da5a7d098e45a3ee7477 210 SUPERFAMILY SSF53335 5 199 3.52E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_20786 8408ea13d921da5a7d098e45a3ee7477 210 Gene3D G3DSA:3.40.50.150 9 207 3.0E-28 T 14-10-2018 VEJY3_20786 8408ea13d921da5a7d098e45a3ee7477 210 Pfam PF13489 Methyltransferase domain 35 190 1.1E-12 T 14-10-2018 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 SMART SM00422 2 71 2.9E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.9E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 SUPERFAMILY SSF46955 2 121 4.4E-35 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_14695 9b54fbd51503b3aa29e69616e768e21c 132 Gene3D G3DSA:1.10.1660.10 1 129 2.4E-37 T 14-10-2018 VEJY3_20276 d3ba72c0151e38cbdd68fee60a16dd4b 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 404 1.2E-15 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEJY3_01490 c31cad09093508d56a37b7dfa271662d 242 Gene3D G3DSA:3.40.50.300 7 232 2.6E-52 T 14-10-2018 VEJY3_01490 c31cad09093508d56a37b7dfa271662d 242 SMART SM00382 35 233 8.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_01490 c31cad09093508d56a37b7dfa271662d 242 SUPERFAMILY SSF52540 8 228 2.03E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01490 c31cad09093508d56a37b7dfa271662d 242 Pfam PF00005 ABC transporter 30 185 3.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 Pfam PF01368 DHH family 2 142 4.0E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 SMART SM01131 178 300 1.8E-34 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 SUPERFAMILY SSF64182 1 298 4.97E-67 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 Pfam PF02833 DHHA2 domain 180 297 2.4E-15 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 Gene3D G3DSA:3.10.310.20 187 301 1.7E-22 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEJY3_05680 2ffe2529e06ad50bb548494a76e9b3fe 301 Gene3D G3DSA:3.90.1640.10 1 186 3.8E-63 T 14-10-2018 VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 Gene3D G3DSA:2.40.30.170 234 278 9.6E-38 T 14-10-2018 VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 Pfam PF13533 Biotin-lipoyl like 44 90 5.0E-15 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 SUPERFAMILY SSF111369 169 243 1.24E-6 T 14-10-2018 VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 Gene3D G3DSA:2.40.50.100 45 233 9.6E-38 T 14-10-2018 VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 Gene3D G3DSA:1.10.287.470 77 199 9.6E-38 T 14-10-2018 VEJY3_17546 5e28caac0ab36f033b773f023e474ca4 352 SUPERFAMILY SSF111369 44 175 7.72E-14 T 14-10-2018 VEJY3_00910 d728bd47565ae1bbdb405e46fd2cbdf6 371 Gene3D G3DSA:3.40.50.2000 13 167 7.1E-80 T 14-10-2018 VEJY3_00910 d728bd47565ae1bbdb405e46fd2cbdf6 371 Pfam PF00534 Glycosyl transferases group 1 183 332 3.2E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_00910 d728bd47565ae1bbdb405e46fd2cbdf6 371 Pfam PF13439 Glycosyltransferase Family 4 13 171 3.2E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_00910 d728bd47565ae1bbdb405e46fd2cbdf6 371 SUPERFAMILY SSF53756 2 362 1.65E-61 T 14-10-2018 VEJY3_00910 d728bd47565ae1bbdb405e46fd2cbdf6 371 Gene3D G3DSA:3.40.50.2000 168 327 7.1E-80 T 14-10-2018 VEJY3_18326 def184b33043018de24148017cbba62b 192 Pfam PF01871 AMMECR1 23 188 1.1E-38 T 14-10-2018 IPR002733 AMMECR1 domain VEJY3_18326 def184b33043018de24148017cbba62b 192 SUPERFAMILY SSF143447 4 191 8.5E-50 T 14-10-2018 IPR036071 AMMECR1 domain superfamily VEJY3_18326 def184b33043018de24148017cbba62b 192 Gene3D G3DSA:3.30.700.20 16 191 3.4E-42 T 14-10-2018 IPR027485 AMMECR1, N-terminal VEJY3_18326 def184b33043018de24148017cbba62b 192 Gene3D G3DSA:3.30.1490.150 117 189 3.4E-42 T 14-10-2018 VEJY3_16391 0bcdea04ec7320b058d904b20a5a3981 414 SUPERFAMILY SSF51905 5 300 3.63E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_16391 0bcdea04ec7320b058d904b20a5a3981 414 Pfam PF01266 FAD dependent oxidoreductase 6 397 1.5E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.1E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.1E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.1E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 SUPERFAMILY SSF143800 1 81 2.55E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 Gene3D G3DSA:2.30.170.50 1 84 1.9E-24 T 14-10-2018 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.066 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_12145 aa7570e9eb059f87172cb95d427b7df8 84 Pfam PF01197 Ribosomal protein L31 1 79 2.0E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 2.6E-27 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Pfam PF10531 SLBB domain 174 225 1.8E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Pfam PF10531 SLBB domain 257 303 4.6E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Gene3D G3DSA:1.20.5.70 345 378 3.5E-19 T 14-10-2018 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Gene3D G3DSA:3.30.1950.10 89 170 5.8E-120 T 14-10-2018 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Gene3D G3DSA:3.10.560.10 256 342 5.8E-120 T 14-10-2018 VEJY3_01070 9a23e405a591dd904e4de946c0e773a2 378 Gene3D G3DSA:3.10.560.10 70 255 5.8E-120 T 14-10-2018 VEJY3_24256 6a569dbbe6d73f4214c7e7e3842ff08a 333 SUPERFAMILY SSF55909 27 321 1.04E-37 T 14-10-2018 VEJY3_24256 6a569dbbe6d73f4214c7e7e3842ff08a 333 Gene3D G3DSA:3.75.10.10 25 321 1.8E-43 T 14-10-2018 VEJY3_24256 6a569dbbe6d73f4214c7e7e3842ff08a 333 Pfam PF02274 Amidinotransferase 31 326 5.3E-64 T 14-10-2018 VEJY3_24256 6a569dbbe6d73f4214c7e7e3842ff08a 333 PIRSF PIRSF028188 7 329 9.1E-156 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 Gene3D G3DSA:3.40.605.10 23 475 2.9E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 Gene3D G3DSA:3.40.309.10 263 452 2.9E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 Pfam PF00171 Aldehyde dehydrogenase family 23 479 1.8E-169 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEJY3_06975 06ba42c05dce0556ac729d5142e86df5 485 SUPERFAMILY SSF53720 9 483 4.19E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_05335 02be91894a0d06a99aefa7afe9b41097 266 Gene3D G3DSA:3.90.226.10 53 255 1.1E-18 T 14-10-2018 VEJY3_05335 02be91894a0d06a99aefa7afe9b41097 266 SUPERFAMILY SSF52096 86 207 8.42E-13 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_05335 02be91894a0d06a99aefa7afe9b41097 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 8 264 4.2E-77 T 14-10-2018 VEJY3_10785 6af2a93026ed832d150e68c2f9f2cd07 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 14-10-2018 IPR004027 SEC-C motif VEJY3_10785 6af2a93026ed832d150e68c2f9f2cd07 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 154 9.9E-7 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEJY3_10785 6af2a93026ed832d150e68c2f9f2cd07 202 Gene3D G3DSA:3.10.450.50 159 202 8.6E-9 T 14-10-2018 VEJY3_10785 6af2a93026ed832d150e68c2f9f2cd07 202 SUPERFAMILY SSF103642 182 201 3.27E-7 T 14-10-2018 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 Gene3D G3DSA:3.40.50.2300 1 131 3.2E-44 T 14-10-2018 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 SUPERFAMILY SSF52172 7 127 9.96E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 SUPERFAMILY SSF46894 130 203 2.11E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 SMART SM00421 139 196 3.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 6.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 6.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 6.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 Pfam PF00072 Response regulator receiver domain 7 116 1.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 1.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 Gene3D G3DSA:1.10.10.10 133 199 3.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_16976 6189d50dce5c82fc18e0ce13f55cb5eb 212 SMART SM00448 5 116 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06665 f06650d15000243fe62e1ff889ade044 99 Pfam PF05488 PAAR motif 24 89 8.7E-23 T 14-10-2018 IPR008727 PAAR motif VEJY3_06665 f06650d15000243fe62e1ff889ade044 99 Gene3D G3DSA:2.60.200.60 57 98 5.0E-11 T 14-10-2018 VEJY3_06665 f06650d15000243fe62e1ff889ade044 99 Gene3D G3DSA:2.60.200.60 1 56 5.2E-9 T 14-10-2018 VEJY3_05910 81d8d3986c3060070dcd13d9737c3af9 480 Pfam PF13460 NAD(P)H-binding 8 150 1.4E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_05910 81d8d3986c3060070dcd13d9737c3af9 480 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 1.9E-13 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 VEJY3_05910 81d8d3986c3060070dcd13d9737c3af9 480 Gene3D G3DSA:3.40.50.720 2 261 2.1E-34 T 14-10-2018 VEJY3_05910 81d8d3986c3060070dcd13d9737c3af9 480 SUPERFAMILY SSF51735 1 294 2.68E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 Gene3D G3DSA:1.10.10.10 9 112 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 SUPERFAMILY SSF46785 23 109 1.49E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 SMART SM00418 28 106 1.9E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 3.5E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_22091 b33477737afb70c5fb02cc73af88df99 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 81 96 8.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_18116 0d575bda729ecc9cff4c2178eaafb125 279 SUPERFAMILY SSF53213 2 277 2.35E-89 T 14-10-2018 VEJY3_18116 0d575bda729ecc9cff4c2178eaafb125 279 Gene3D G3DSA:3.40.830.10 1 279 2.7E-81 T 14-10-2018 VEJY3_18116 0d575bda729ecc9cff4c2178eaafb125 279 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 263 5.6E-63 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VEJY3_11780 987b579f70e28b2f991fda8202501099 913 SUPERFAMILY SSF52540 365 670 6.64E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11780 987b579f70e28b2f991fda8202501099 913 SUPERFAMILY SSF52540 211 376 9.93E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11780 987b579f70e28b2f991fda8202501099 913 Pfam PF08378 Nuclease-related domain 16 115 4.5E-8 T 14-10-2018 IPR011528 Nuclease-related domain, NERD VEJY3_11780 987b579f70e28b2f991fda8202501099 913 Gene3D G3DSA:3.40.50.300 196 413 1.2E-8 T 14-10-2018 VEJY3_03920 52e93166b43d9ffe9f97ec33afb9ebc6 197 SUPERFAMILY SSF54593 3 196 4.95E-67 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_03920 52e93166b43d9ffe9f97ec33afb9ebc6 197 Pfam PF06185 YecM protein 14 196 2.2E-67 T 14-10-2018 IPR010393 Protein of unknown function DUF991 VEJY3_03920 52e93166b43d9ffe9f97ec33afb9ebc6 197 Gene3D G3DSA:3.10.180.10 6 197 1.5E-61 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_06785 76ff2cd47e23ffbe6c67cc64cc7311b6 329 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 2 314 52.898 T 14-10-2018 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 VEJY3_06785 76ff2cd47e23ffbe6c67cc64cc7311b6 329 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 307 2.0E-72 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 VEJY3_06785 76ff2cd47e23ffbe6c67cc64cc7311b6 329 SUPERFAMILY SSF53213 4 325 1.1E-73 T 14-10-2018 VEJY3_13335 aab89b1bdf42e1d61bff0e0309b60b35 192 Gene3D G3DSA:1.20.120.740 4 192 4.4E-49 T 14-10-2018 VEJY3_13335 aab89b1bdf42e1d61bff0e0309b60b35 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.308 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEJY3_13335 aab89b1bdf42e1d61bff0e0309b60b35 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.6E-35 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEJY3_13335 aab89b1bdf42e1d61bff0e0309b60b35 192 SUPERFAMILY SSF101327 6 178 1.83E-44 T 14-10-2018 IPR036255 YgfB-like superfamily VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 Gene3D G3DSA:1.10.357.10 1 208 1.3E-64 T 14-10-2018 VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.8E-43 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR VEJY3_14445 f5af2d9f14d2fdc0a1ae69ef04f59f68 211 SUPERFAMILY SSF46689 2 69 2.04E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05690 55b19336ff3fb881ea3a75f8182aee9b 262 Gene3D G3DSA:3.40.50.300 1 261 6.0E-70 T 14-10-2018 VEJY3_05690 55b19336ff3fb881ea3a75f8182aee9b 262 SMART SM00382 38 227 4.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05690 55b19336ff3fb881ea3a75f8182aee9b 262 Pfam PF00005 ABC transporter 30 178 1.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_05690 55b19336ff3fb881ea3a75f8182aee9b 262 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_05690 55b19336ff3fb881ea3a75f8182aee9b 262 SUPERFAMILY SSF52540 3 253 6.01E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00685 67fc22c5f3c4e8ace51a283122b696a4 255 Pfam PF00561 alpha/beta hydrolase fold 16 241 9.0E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_00685 67fc22c5f3c4e8ace51a283122b696a4 255 SUPERFAMILY SSF53474 3 252 6.6E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_00685 67fc22c5f3c4e8ace51a283122b696a4 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 253 4.5E-103 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VEJY3_00685 67fc22c5f3c4e8ace51a283122b696a4 255 Gene3D G3DSA:3.40.50.1820 1 254 7.4E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_00685 67fc22c5f3c4e8ace51a283122b696a4 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.087 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VEJY3_19146 3d0068c5d97c4c86d2a4b569b521b29b 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 309 453 6.7E-31 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19146 3d0068c5d97c4c86d2a4b569b521b29b 455 SUPERFAMILY SSF55073 312 453 1.73E-29 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_19146 3d0068c5d97c4c86d2a4b569b521b29b 455 SMART SM00267 298 454 2.1E-25 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19146 3d0068c5d97c4c86d2a4b569b521b29b 455 Gene3D G3DSA:3.30.70.270 307 455 1.6E-34 T 14-10-2018 VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 PRINTS PR00069 Aldo-keto reductase signature 171 200 2.2E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 PRINTS PR00069 Aldo-keto reductase signature 41 65 2.2E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 PRINTS PR00069 Aldo-keto reductase signature 137 154 2.2E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 PRINTS PR00069 Aldo-keto reductase signature 106 124 2.2E-10 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 SUPERFAMILY SSF51430 1 318 1.96E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 Pfam PF00248 Aldo/keto reductase family 13 309 3.3E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_18036 96e683327f0839d1900e7874b7a2bac1 343 Gene3D G3DSA:3.20.20.100 3 341 1.5E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 Gene3D G3DSA:1.20.81.30 62 176 2.2E-32 T 14-10-2018 VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 Gene3D G3DSA:1.20.81.30 257 370 4.0E-29 T 14-10-2018 VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 5.9E-31 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.0E-26 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.9E-8 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.9E-8 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.9E-8 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13840 4c582af1ce24c657311a30cca2fa1629 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.9E-8 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_00115 836e6f00361d0ea9cc19cdd5f528f7ef 82 Gene3D G3DSA:3.30.110.40 5 80 3.0E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily VEJY3_00115 836e6f00361d0ea9cc19cdd5f528f7ef 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.4E-22 T 14-10-2018 IPR001455 TusA-like domain VEJY3_00115 836e6f00361d0ea9cc19cdd5f528f7ef 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain VEJY3_00115 836e6f00361d0ea9cc19cdd5f528f7ef 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.883 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VEJY3_00115 836e6f00361d0ea9cc19cdd5f528f7ef 82 SUPERFAMILY SSF64307 9 80 6.54E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily VEJY3_06840 a6b81fcdfbb3bde8928929fb89050fd2 424 SUPERFAMILY SSF53822 25 394 4.91E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_06840 a6b81fcdfbb3bde8928929fb89050fd2 424 Gene3D G3DSA:3.40.50.2300 141 380 1.6E-131 T 14-10-2018 VEJY3_06840 a6b81fcdfbb3bde8928929fb89050fd2 424 Pfam PF13433 Periplasmic binding protein domain 26 393 6.4E-170 T 14-10-2018 VEJY3_06840 a6b81fcdfbb3bde8928929fb89050fd2 424 Gene3D G3DSA:3.40.50.2300 28 361 1.6E-131 T 14-10-2018 VEJY3_20016 814d7e60d0ec823fc4fc23f3bad762ad 161 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 1.3E-37 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 SUPERFAMILY SSF109998 24 196 2.55E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.961 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 SUPERFAMILY SSF54534 278 380 2.42E-29 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Pfam PF09312 SurA N-terminal domain 24 141 1.8E-43 T 14-10-2018 IPR015391 SurA N-terminal VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 5.0E-23 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 3.1E-21 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 SUPERFAMILY SSF54534 172 270 1.57E-24 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Gene3D G3DSA:1.10.4030.30 25 271 5.5E-69 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Gene3D G3DSA:3.10.50.40 275 415 4.0E-39 T 14-10-2018 VEJY3_01655 44bc59323875da9e03c37fb41a7512e2 427 Gene3D G3DSA:3.10.50.40 171 270 5.5E-69 T 14-10-2018 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.555 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.5E-17 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 SUPERFAMILY SSF50249 2 63 4.57E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 SMART SM00278 108 127 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 SMART SM00278 73 92 540.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 SUPERFAMILY SSF47781 66 136 2.11E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 SUPERFAMILY SSF46929 158 203 8.5E-13 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 9.8E-14 T 14-10-2018 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Pfam PF01330 RuvA N terminal domain 2 62 3.5E-21 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Gene3D G3DSA:1.10.8.10 157 204 1.4E-24 T 14-10-2018 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Gene3D G3DSA:1.10.150.20 67 143 7.8E-26 T 14-10-2018 VEJY3_04885 6451eaddd30de70aabda0c75df7810f6 204 Gene3D G3DSA:2.40.50.140 1 65 4.9E-28 T 14-10-2018 VEJY3_05070 b0f79a6a50349084ae4ac86084b832f7 337 SUPERFAMILY SSF56349 45 274 1.26E-8 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_05070 b0f79a6a50349084ae4ac86084b832f7 337 Pfam PF12835 Integrase 156 272 6.6E-7 T 14-10-2018 IPR024456 Integrase catalytic domain, putative VEJY3_05070 b0f79a6a50349084ae4ac86084b832f7 337 Pfam PF13102 Phage integrase SAM-like domain 45 124 1.2E-4 T 14-10-2018 IPR025269 Phage integrase SAM-like domain VEJY3_05070 b0f79a6a50349084ae4ac86084b832f7 337 Gene3D G3DSA:1.10.150.130 31 134 1.6E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_10215 087a553e41bd8aab1d6e89f5d21dd84c 255 SUPERFAMILY SSF81301 10 63 3.15E-7 T 14-10-2018 VEJY3_10215 087a553e41bd8aab1d6e89f5d21dd84c 255 Gene3D G3DSA:3.30.460.10 9 93 4.2E-7 T 14-10-2018 VEJY3_10585 8df3bf7e11ef1d54429a6d94c39490af 467 Gene3D G3DSA:3.30.70.270 69 166 1.3E-7 T 14-10-2018 VEJY3_10585 8df3bf7e11ef1d54429a6d94c39490af 467 SUPERFAMILY SSF56672 22 225 2.22E-31 T 14-10-2018 VEJY3_10585 8df3bf7e11ef1d54429a6d94c39490af 467 Gene3D G3DSA:1.10.150.20 167 207 1.3E-7 T 14-10-2018 VEJY3_10585 8df3bf7e11ef1d54429a6d94c39490af 467 Pfam PF00817 impB/mucB/samB family 23 146 5.8E-7 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEJY3_10585 8df3bf7e11ef1d54429a6d94c39490af 467 Gene3D G3DSA:2.30.40.20 27 68 1.3E-7 T 14-10-2018 VEJY3_01885 5ef655cd59f8f8912697b7b0ee74f9d2 419 Pfam PF01384 Phosphate transporter family 26 407 8.5E-113 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 Gene3D G3DSA:3.40.50.720 1 166 7.1E-52 T 14-10-2018 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 SUPERFAMILY SSF48179 167 290 9.3E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 SUPERFAMILY SSF51735 4 166 1.78E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 PIRSF PIRSF000103 1 292 8.7E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 6.0E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 1.9E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_23181 abce3f74be54357982d5a10cb1e04520 292 Gene3D G3DSA:1.10.1040.10 167 292 6.0E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 Pfam PF00293 NUDIX domain 7 145 6.3E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 Gene3D G3DSA:3.90.79.10 1 159 7.8E-51 T 14-10-2018 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEJY3_02350 09b073b4ddda45747fd25fd130d80866 173 SUPERFAMILY SSF55811 6 152 8.39E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 515 529 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 382 400 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 290 308 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 183 197 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 577 592 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 310 329 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 769 786 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00943 Copper-transporting ATPase signature 865 879 1.1E-13 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 596 602 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 ProSitePatterns PS01047 Heavy-metal-associated domain. 173 202 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF81665 361 857 2.22E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Gene3D G3DSA:3.40.50.1000 575 844 3.6E-95 T 14-10-2018 IPR023214 HAD superfamily VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Pfam PF00403 Heavy-metal-associated domain 6 61 1.3E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Pfam PF00403 Heavy-metal-associated domain 173 232 7.5E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF81653 395 492 5.62E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Pfam PF00702 haloacid dehalogenase-like hydrolase 590 806 1.4E-48 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Pfam PF00122 E1-E2 ATPase 393 573 5.5E-47 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF55008 66 125 5.37E-6 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Gene3D G3DSA:3.30.70.100 6 63 2.8E-8 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF55008 164 237 3.01E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 792 811 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 815 827 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 728 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 442 456 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 749 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 608 1.4E-27 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Gene3D G3DSA:3.30.70.100 160 244 4.1E-20 T 14-10-2018 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF55008 2 62 5.5E-9 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 SUPERFAMILY SSF56784 592 898 1.33E-62 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Gene3D G3DSA:3.40.1110.10 605 724 3.6E-95 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEJY3_03485 b7512428691694bf66b717ef69edd86c 907 Gene3D G3DSA:2.70.150.20 380 496 4.1E-36 T 14-10-2018 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 SUPERFAMILY SSF46894 131 222 6.8E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 SUPERFAMILY SSF52172 2 116 1.18E-34 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 SMART SM00862 145 221 1.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 SMART SM00448 1 110 9.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 Pfam PF00072 Response regulator receiver domain 2 110 3.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 Gene3D G3DSA:1.10.10.10 131 224 3.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 Gene3D G3DSA:3.40.50.2300 1 128 7.3E-31 T 14-10-2018 VEJY3_19356 3f292163b0ef04177f2b8999d084d4d2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.6E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_22241 e40912475b1a29974675bad48f946a95 652 Pfam PF02254 TrkA-N domain 422 534 2.2E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_22241 e40912475b1a29974675bad48f946a95 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.0E-56 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_22241 e40912475b1a29974675bad48f946a95 652 SUPERFAMILY SSF51735 421 547 1.12E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22241 e40912475b1a29974675bad48f946a95 652 Gene3D G3DSA:3.40.50.720 419 579 2.7E-35 T 14-10-2018 VEJY3_22241 e40912475b1a29974675bad48f946a95 652 Gene3D G3DSA:1.20.1530.20 2 399 7.6E-76 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_10325 50daebd4bb096d6c2df479158a910c4f 98 Pfam PF03795 YCII-related domain 1 95 1.9E-30 T 14-10-2018 IPR005545 YCII-related VEJY3_10325 50daebd4bb096d6c2df479158a910c4f 98 SUPERFAMILY SSF54909 1 98 3.49E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_10325 50daebd4bb096d6c2df479158a910c4f 98 Gene3D G3DSA:3.30.70.1060 1 98 2.8E-39 T 14-10-2018 VEJY3_10085 c541ae1a9114775b11241dfe7b1d8924 218 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 1.1E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_10085 c541ae1a9114775b11241dfe7b1d8924 218 Gene3D G3DSA:3.60.15.10 3 213 9.2E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_10085 c541ae1a9114775b11241dfe7b1d8924 218 SMART SM00849 14 195 1.4E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_10085 c541ae1a9114775b11241dfe7b1d8924 218 SUPERFAMILY SSF56281 4 211 1.3E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 1.2E-37 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 Gene3D G3DSA:1.10.10.60 188 293 1.2E-26 T 14-10-2018 VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 SMART SM00342 209 292 5.1E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 SUPERFAMILY SSF46689 245 292 6.09E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 Pfam PF12833 Helix-turn-helix domain 215 292 1.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_20111 51ea2339c15b8fcf2c6a76a0ce8c99d8 293 SUPERFAMILY SSF46689 193 243 5.29E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_14605 0ffb15e41e3b78a65df369bafd65ae43 396 Gene3D G3DSA:1.20.1250.20 195 381 7.8E-34 T 14-10-2018 VEJY3_14605 0ffb15e41e3b78a65df369bafd65ae43 396 Gene3D G3DSA:1.20.1250.20 2 186 1.7E-17 T 14-10-2018 VEJY3_14605 0ffb15e41e3b78a65df369bafd65ae43 396 PIRSF PIRSF004925 1 385 1.7E-104 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VEJY3_14605 0ffb15e41e3b78a65df369bafd65ae43 396 SUPERFAMILY SSF103473 8 373 1.57E-37 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_14605 0ffb15e41e3b78a65df369bafd65ae43 396 Pfam PF12832 MFS_1 like family 13 361 2.6E-40 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain VEJY3_19306 1fddae536a1b11047ce72bc05ef8c3b2 222 Gene3D G3DSA:1.10.3720.10 3 218 2.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19306 1fddae536a1b11047ce72bc05ef8c3b2 222 SUPERFAMILY SSF161098 15 202 1.7E-43 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19306 1fddae536a1b11047ce72bc05ef8c3b2 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 217 3.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 Pfam PF03466 LysR substrate binding domain 89 289 3.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 SUPERFAMILY SSF53850 90 290 2.02E-25 T 14-10-2018 VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 Gene3D G3DSA:3.40.190.290 93 285 1.7E-12 T 14-10-2018 VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 SUPERFAMILY SSF46785 5 87 5.85E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_15420 4aa67d54a17e05ec1e37660c55ae5944 300 Gene3D G3DSA:1.10.10.10 1 89 8.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10060 3a37cc82c18a45b73c13341c5def3d9c 428 PIRSF PIRSF006066 1 427 2.3E-74 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_10060 3a37cc82c18a45b73c13341c5def3d9c 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 7.4E-100 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_03330 7cfc98148718982d4963b1efd645f880 69 SUPERFAMILY SSF81301 1 69 7.19E-27 T 14-10-2018 VEJY3_03330 7cfc98148718982d4963b1efd645f880 69 Gene3D G3DSA:3.30.460.10 1 69 1.0E-26 T 14-10-2018 VEJY3_03330 7cfc98148718982d4963b1efd645f880 69 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 1 68 6.8E-28 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VEJY3_03330 7cfc98148718982d4963b1efd645f880 69 Pfam PF02410 Ribosomal silencing factor during starvation 1 68 3.2E-20 T 14-10-2018 VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 SMART SM00345 7 65 1.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 SUPERFAMILY SSF48008 71 201 3.14E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 Gene3D G3DSA:1.10.10.10 1 66 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 Gene3D G3DSA:1.20.120.530 69 201 2.1E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 SUPERFAMILY SSF46785 5 69 1.19E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 2.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 SMART SM00895 75 198 1.0E-5 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_06735 9c7bbd6685a3a0f40e5f14a9d2c190e3 223 Pfam PF07729 FCD domain 76 196 5.1E-15 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_07825 c1aa2511cbb1c03a96bfe691207f1b9a 447 Pfam PF00293 NUDIX domain 6 76 7.3E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_07825 c1aa2511cbb1c03a96bfe691207f1b9a 447 SUPERFAMILY SSF55811 3 108 8.8E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_07825 c1aa2511cbb1c03a96bfe691207f1b9a 447 Gene3D G3DSA:3.90.79.10 2 83 1.9E-13 T 14-10-2018 VEJY3_07825 c1aa2511cbb1c03a96bfe691207f1b9a 447 SUPERFAMILY SSF48317 139 318 7.46E-10 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEJY3_07825 c1aa2511cbb1c03a96bfe691207f1b9a 447 ProSitePatterns PS00893 Nudix box signature. 23 44 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 SUPERFAMILY SSF53738 250 379 2.04E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 9.8E-25 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Gene3D G3DSA:3.40.120.10 171 365 3.0E-60 T 14-10-2018 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 SUPERFAMILY SSF53738 2 187 1.94E-40 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Gene3D G3DSA:3.30.310.50 369 469 2.9E-16 T 14-10-2018 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 SUPERFAMILY SSF55957 374 466 1.83E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Gene3D G3DSA:3.40.120.10 263 368 3.0E-60 T 14-10-2018 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 406 466 7.2E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 2.7E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Gene3D G3DSA:3.40.120.10 1 170 3.2E-47 T 14-10-2018 VEJY3_12860 64d9124c7a8d895f5c62cc8e39f05844 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 3.2E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEJY3_05705 803cbf3502ea4e6e1cceda77464065c7 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.1E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_05705 803cbf3502ea4e6e1cceda77464065c7 320 SUPERFAMILY SSF161098 70 298 7.52E-20 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 SUPERFAMILY SSF53178 5 194 8.63E-69 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.208 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 Gene3D G3DSA:3.40.50.1470 1 196 6.1E-76 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 8.5E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VEJY3_03390 4d4b35c3ac6af3a5ebb963aa74387f96 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 SUPERFAMILY SSF118215 29 441 1.06E-90 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.9E-31 T 14-10-2018 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 8.2E-99 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEJY3_06325 b63cc053e5e9ddb22be23591022c6de3 459 Gene3D G3DSA:1.10.3860.10 4 457 6.8E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_20391 cd1f8dacb35f3a3dc4c3c02c51afdfa0 81 Pfam PF00550 Phosphopantetheine attachment site 21 75 7.9E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEJY3_20391 cd1f8dacb35f3a3dc4c3c02c51afdfa0 81 SUPERFAMILY SSF47336 14 79 3.01E-11 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_20391 cd1f8dacb35f3a3dc4c3c02c51afdfa0 81 Gene3D G3DSA:1.10.1200.10 1 79 1.4E-11 T 14-10-2018 IPR036736 ACP-like superfamily VEJY3_10570 56ecdbe918c1e7c8f4926ecc461e78d5 353 Pfam PF01343 Peptidase family S49 166 314 3.7E-46 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEJY3_10570 56ecdbe918c1e7c8f4926ecc461e78d5 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.6E-56 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VEJY3_10570 56ecdbe918c1e7c8f4926ecc461e78d5 353 SUPERFAMILY SSF52096 103 303 1.89E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_10570 56ecdbe918c1e7c8f4926ecc461e78d5 353 Gene3D G3DSA:3.90.226.10 109 306 7.4E-44 T 14-10-2018 VEJY3_10570 56ecdbe918c1e7c8f4926ecc461e78d5 353 Gene3D G3DSA:3.40.1750.20 206 270 7.4E-44 T 14-10-2018 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 PIRSF PIRSF000005 4 207 3.4E-30 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 Gene3D G3DSA:1.10.760.10 35 115 9.9E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 SUPERFAMILY SSF46626 37 114 1.48E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 SUPERFAMILY SSF46626 123 206 6.24E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 Gene3D G3DSA:1.10.760.10 119 206 4.6E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_05900 cc6140f39898405cb114ff292f89dba6 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 111 4.5E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 2.6E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Gene3D G3DSA:3.40.50.2300 2 139 2.4E-8 T 14-10-2018 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SUPERFAMILY SSF51206 201 311 2.09E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SUPERFAMILY SSF47384 335 376 8.83E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 367 1.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Gene3D G3DSA:3.30.565.10 489 644 3.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SMART SM00100 181 301 0.0024 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Gene3D G3DSA:2.60.120.10 144 318 1.6E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SUPERFAMILY SSF52172 3 136 2.57E-7 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SMART SM00387 528 641 1.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_06010 99e4d200998cf54c2ef8e4bceeb346bc 646 SUPERFAMILY SSF55874 481 639 3.93E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_10635 400f6f8c4be1f814b9291375b817788b 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 3.3E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_10635 400f6f8c4be1f814b9291375b817788b 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_10635 400f6f8c4be1f814b9291375b817788b 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_10635 400f6f8c4be1f814b9291375b817788b 476 Gene3D G3DSA:3.30.1360.60 396 475 4.7E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_10635 400f6f8c4be1f814b9291375b817788b 476 SUPERFAMILY SSF55604 402 472 3.01E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_13630 63b5308046551cba08788fc9c848d3ce 241 Pfam PF01553 Acyltransferase 59 180 2.6E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_13630 63b5308046551cba08788fc9c848d3ce 241 SMART SM00563 67 182 2.0E-41 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_13630 63b5308046551cba08788fc9c848d3ce 241 SUPERFAMILY SSF69593 5 235 1.96E-57 T 14-10-2018 VEJY3_18536 468f3c81028fe38278aa6f5416838f48 535 SUPERFAMILY SSF52096 24 267 1.25E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_18536 468f3c81028fe38278aa6f5416838f48 535 SUPERFAMILY SSF52096 237 517 4.18E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_18536 468f3c81028fe38278aa6f5416838f48 535 Gene3D G3DSA:3.90.226.10 274 535 1.9E-104 T 14-10-2018 VEJY3_18536 468f3c81028fe38278aa6f5416838f48 535 Pfam PF01039 Carboxyl transferase domain 48 525 5.9E-152 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEJY3_18536 468f3c81028fe38278aa6f5416838f48 535 Gene3D G3DSA:3.90.226.10 1 270 7.4E-98 T 14-10-2018 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 Gene3D G3DSA:3.40.630.20 1 212 4.3E-79 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.866 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PIRSF PIRSF015592 1 210 8.8E-82 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 3.4E-76 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 SUPERFAMILY SSF53182 1 211 3.14E-72 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.5E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.5E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.5E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.5E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 2.5E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEJY3_21761 5e347eb8c0be5cae00180c506cc63db7 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 VEJY3_21501 15b88df8cc7643cb88595c101a6b2f20 370 PIRSF PIRSF038896 12 355 2.1E-85 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 VEJY3_21501 15b88df8cc7643cb88595c101a6b2f20 370 SUPERFAMILY SSF56281 102 352 5.77E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_21501 15b88df8cc7643cb88595c101a6b2f20 370 Pfam PF12706 Beta-lactamase superfamily domain 118 312 1.0E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_21501 15b88df8cc7643cb88595c101a6b2f20 370 Gene3D G3DSA:3.60.15.10 21 352 1.3E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_22866 420e443441d91c5757283b6c6c643c61 324 SUPERFAMILY SSF54427 192 319 1.28E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22866 420e443441d91c5757283b6c6c643c61 324 SUPERFAMILY SSF54427 10 149 2.91E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22866 420e443441d91c5757283b6c6c643c61 324 Gene3D G3DSA:3.10.450.50 191 323 5.2E-17 T 14-10-2018 VEJY3_22866 420e443441d91c5757283b6c6c643c61 324 Gene3D G3DSA:3.10.450.50 18 158 5.1E-17 T 14-10-2018 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 Gene3D G3DSA:3.50.30.80 421 573 3.1E-55 T 14-10-2018 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.033 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 SUPERFAMILY SSF52016 421 608 2.2E-60 T 14-10-2018 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 Pfam PF00920 Dehydratase family 34 604 4.5E-218 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 SUPERFAMILY SSF143975 3 420 2.22E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_15410 ec4d706b01f3d3e8e16e260ac85b12df 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEJY3_13895 15621278cbc46f4e07374a9732984d16 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 1.6E-124 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VEJY3_13895 15621278cbc46f4e07374a9732984d16 290 Pfam PF00483 Nucleotidyl transferase 9 265 3.1E-33 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_13895 15621278cbc46f4e07374a9732984d16 290 Gene3D G3DSA:3.90.550.10 1 278 6.9E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_13895 15621278cbc46f4e07374a9732984d16 290 SUPERFAMILY SSF53448 2 271 1.48E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_11905 82853d9bd54d2af916f842700039c592 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.63 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VEJY3_11905 82853d9bd54d2af916f842700039c592 208 Gene3D G3DSA:3.40.50.2020 1 208 2.5E-74 T 14-10-2018 VEJY3_11905 82853d9bd54d2af916f842700039c592 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 3.3E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VEJY3_11905 82853d9bd54d2af916f842700039c592 208 SUPERFAMILY SSF53271 3 206 4.85E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_11905 82853d9bd54d2af916f842700039c592 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 4.4E-65 T 14-10-2018 VEJY3_05455 7e81a3a121e68dbc07a81b120e9d54e7 227 Pfam PF13500 AAA domain 4 211 6.1E-38 T 14-10-2018 VEJY3_05455 7e81a3a121e68dbc07a81b120e9d54e7 227 SUPERFAMILY SSF52540 1 215 3.76E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05455 7e81a3a121e68dbc07a81b120e9d54e7 227 PIRSF PIRSF006755 1 226 1.6E-79 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VEJY3_05455 7e81a3a121e68dbc07a81b120e9d54e7 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.967 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VEJY3_05455 7e81a3a121e68dbc07a81b120e9d54e7 227 Gene3D G3DSA:3.40.50.300 3 224 1.3E-69 T 14-10-2018 VEJY3_17631 964950880b0479ccd2692bbc6adb6788 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 3.9E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VEJY3_17631 964950880b0479ccd2692bbc6adb6788 151 SUPERFAMILY SSF48695 38 148 1.8E-40 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_17631 964950880b0479ccd2692bbc6adb6788 151 Gene3D G3DSA:1.10.1130.10 65 132 2.2E-28 T 14-10-2018 VEJY3_17631 964950880b0479ccd2692bbc6adb6788 151 PIRSF PIRSF006105 1 151 6.8E-47 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 SUPERFAMILY SSF56235 2 256 8.58E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 Gene3D G3DSA:3.60.20.10 2 411 1.5E-158 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.951 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 Pfam PF00156 Phosphoribosyl transferase domain 279 389 2.6E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 1.5E-16 T 14-10-2018 VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 PIRSF PIRSF000485 1 479 3.7E-170 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 Gene3D G3DSA:3.40.50.2020 276 440 1.5E-158 T 14-10-2018 VEJY3_11255 3af9236b6d9b4b4e3ef49891c05162d7 504 SUPERFAMILY SSF53271 249 482 2.88E-69 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_21041 a835b3163563a69417afffe023ab8371 382 Gene3D G3DSA:3.50.50.60 6 278 9.1E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21041 a835b3163563a69417afffe023ab8371 382 SUPERFAMILY SSF51905 2 303 1.3E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21041 a835b3163563a69417afffe023ab8371 382 Gene3D G3DSA:3.50.50.60 108 242 9.1E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_21041 a835b3163563a69417afffe023ab8371 382 Gene3D G3DSA:3.30.390.120 314 376 3.5E-7 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.3E-18 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.3E-18 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.3E-18 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.3E-18 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.3E-18 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 284 2.7E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 8.5E-13 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 8.5E-13 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 8.5E-13 T 14-10-2018 VEJY3_21041 a835b3163563a69417afffe023ab8371 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 8.5E-13 T 14-10-2018 VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 Pfam PF04542 Sigma-70 region 2 27 93 4.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 49 80 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 SUPERFAMILY SSF88946 21 103 1.14E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 Gene3D G3DSA:1.10.10.10 112 175 2.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 Pfam PF08281 Sigma-70, region 4 117 169 7.5E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 SUPERFAMILY SSF88659 114 174 5.05E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_11385 b7d6c1462e1201d71ed02efcb4c04a09 185 Gene3D G3DSA:1.10.1740.10 13 95 1.4E-17 T 14-10-2018 VEJY3_23196 15725272be364f70d8b84bf9d72b7c07 116 Gene3D G3DSA:2.60.120.10 1 114 4.7E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_23196 15725272be364f70d8b84bf9d72b7c07 116 SUPERFAMILY SSF51182 3 109 3.28E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_23196 15725272be364f70d8b84bf9d72b7c07 116 Pfam PF06249 Ethanolamine utilisation protein EutQ 4 111 5.0E-15 T 14-10-2018 IPR010424 Ethanolamine utilisation EutQ VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Gene3D G3DSA:1.10.287.130 748 851 1.2E-13 T 14-10-2018 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SUPERFAMILY SSF52172 1027 1143 7.83E-18 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SMART SM00387 897 1006 7.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 4.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 4.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 4.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 4.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Gene3D G3DSA:3.30.565.10 861 1011 1.9E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SMART SM00448 1027 1140 5.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 9.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SMART SM00388 788 853 5.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SUPERFAMILY SSF55874 843 1002 7.07E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Pfam PF12860 PAS fold 634 748 3.9E-44 T 14-10-2018 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Gene3D G3DSA:1.20.1730.10 33 509 1.4E-8 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SUPERFAMILY SSF47384 774 854 1.79E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Pfam PF00072 Response regulator receiver domain 1029 1140 6.5E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 SUPERFAMILY SSF55785 626 741 2.3E-9 T 14-10-2018 IPR035965 PAS domain superfamily VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Gene3D G3DSA:3.40.50.2300 1024 1144 6.4E-16 T 14-10-2018 VEJY3_14600 a9c89e3726ba02275c57d5a1ac33cfc3 1144 Gene3D G3DSA:3.30.450.20 616 747 6.4E-12 T 14-10-2018 VEJY3_21211 90fe12003ac702da91419c739522cd33 275 SUPERFAMILY SSF53850 24 270 1.51E-65 T 14-10-2018 VEJY3_21211 90fe12003ac702da91419c739522cd33 275 Gene3D G3DSA:3.40.190.10 26 269 3.7E-81 T 14-10-2018 VEJY3_21211 90fe12003ac702da91419c739522cd33 275 Pfam PF12727 PBP superfamily domain 40 254 1.4E-35 T 14-10-2018 IPR024370 PBP domain VEJY3_21211 90fe12003ac702da91419c739522cd33 275 Gene3D G3DSA:3.40.190.10 97 231 3.7E-81 T 14-10-2018 VEJY3_22311 966c8fb47f8554e20f9232e23082c93c 333 Pfam PF03773 Predicted permease 25 327 5.0E-66 T 14-10-2018 IPR005524 Predicted permease DUF318 VEJY3_15020 e0c08fda9a2162a2944bd976c8e93933 156 Gene3D G3DSA:3.10.590.10 1 153 1.0E-66 T 14-10-2018 VEJY3_15020 e0c08fda9a2162a2944bd976c8e93933 156 SUPERFAMILY SSF88697 1 150 3.84E-63 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_15020 e0c08fda9a2162a2944bd976c8e93933 156 Pfam PF01878 EVE domain 2 147 1.7E-56 T 14-10-2018 IPR002740 EVE domain VEJY3_18241 489393e74310579c180b769f36c3c90e 92 Gene3D G3DSA:3.30.70.100 4 90 5.0E-12 T 14-10-2018 VEJY3_18241 489393e74310579c180b769f36c3c90e 92 SUPERFAMILY SSF54909 4 80 1.11E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_18241 489393e74310579c180b769f36c3c90e 92 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 68 2.2E-8 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 296 35.931 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 SUPERFAMILY SSF53697 8 249 6.47E-60 T 14-10-2018 VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 Gene3D G3DSA:3.40.50.10490 2 219 5.3E-69 T 14-10-2018 VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 186 203 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 Pfam PF13580 SIS domain 47 166 1.8E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_01755 420f4afa64fdff5b9032093dd6f9f437 300 Gene3D G3DSA:1.10.8.1080 220 296 2.0E-16 T 14-10-2018 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Gene3D G3DSA:3.40.640.10 575 843 1.7E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Gene3D G3DSA:1.20.1650.10 463 560 1.2E-46 T 14-10-2018 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Gene3D G3DSA:3.90.1150.10 561 948 1.7E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Pfam PF00202 Aminotransferase class-III 51 464 1.9E-93 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 SUPERFAMILY SSF53383 506 951 2.3E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 4.3E-62 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 SUPERFAMILY SSF53383 41 464 3.94E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Gene3D G3DSA:3.90.1150.10 39 462 4.8E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_10190 405f29134f114b41c8a499d553e2b1ac 958 Gene3D G3DSA:3.40.640.10 87 355 4.8E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 Gene3D G3DSA:1.10.10.10 4 94 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 Gene3D G3DSA:3.40.190.290 101 313 2.2E-16 T 14-10-2018 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 SUPERFAMILY SSF46785 9 91 9.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 Pfam PF03466 LysR substrate binding domain 99 305 1.2E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18466 54ab8e02a4850050bac5af4a8c7ae8e4 327 SUPERFAMILY SSF53850 99 311 8.42E-27 T 14-10-2018 VEJY3_23061 cc29dafb760a9c829745a0170fb0eaa4 545 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 44 539 7.0E-172 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_20796 feb9d9d27a9ee49b15206c12efb78b53 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 8.0E-31 T 14-10-2018 IPR000182 GNAT domain VEJY3_20796 feb9d9d27a9ee49b15206c12efb78b53 181 Gene3D G3DSA:3.40.630.30 2 175 8.3E-47 T 14-10-2018 VEJY3_20796 feb9d9d27a9ee49b15206c12efb78b53 181 SUPERFAMILY SSF55729 3 174 9.28E-49 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_01430 0d6fbd80371703d85030c837b893ee48 153 SUPERFAMILY SSF55729 1 150 2.48E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_01430 0d6fbd80371703d85030c837b893ee48 153 Gene3D G3DSA:3.40.630.30 1 149 9.3E-43 T 14-10-2018 VEJY3_01430 0d6fbd80371703d85030c837b893ee48 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 4.9E-16 T 14-10-2018 IPR000182 GNAT domain VEJY3_01860 a32863eea8f85f38b31327371d05036f 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.689 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEJY3_01860 a32863eea8f85f38b31327371d05036f 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 5.8E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.1E-13 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.1E-13 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.1E-13 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.9E-34 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 Gene3D G3DSA:3.40.50.880 2 193 5.4E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.2E-5 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.2E-5 T 14-10-2018 VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 SUPERFAMILY SSF52317 3 192 5.94E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_10260 3f4f983a8cb6c1bc9dcc0ffc58385d56 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.3E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_14545 958ff71c11c1b4bae30d0518649e4872 159 PIRSF PIRSF029256 1 159 1.1E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VEJY3_14545 958ff71c11c1b4bae30d0518649e4872 159 SUPERFAMILY SSF75217 2 157 1.64E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VEJY3_14545 958ff71c11c1b4bae30d0518649e4872 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 3.1E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEJY3_14545 958ff71c11c1b4bae30d0518649e4872 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.743 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VEJY3_14545 958ff71c11c1b4bae30d0518649e4872 159 Gene3D G3DSA:3.40.1280.10 1 159 6.5E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEJY3_14360 91c7191cec224116c1f41b41d6c0bbac 310 Gene3D G3DSA:3.40.50.300 12 292 5.0E-108 T 14-10-2018 VEJY3_14360 91c7191cec224116c1f41b41d6c0bbac 310 Gene3D G3DSA:1.10.20.140 115 186 5.0E-108 T 14-10-2018 VEJY3_14360 91c7191cec224116c1f41b41d6c0bbac 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 30.113 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VEJY3_14360 91c7191cec224116c1f41b41d6c0bbac 310 SUPERFAMILY SSF52540 10 152 2.98E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14360 91c7191cec224116c1f41b41d6c0bbac 310 Pfam PF01715 IPP transferase 42 287 8.6E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VEJY3_09880 7524bb857df08eae03def36816c7058d 272 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 3 270 2.4E-64 T 14-10-2018 IPR019276 Protein of unkown function DUF2303 VEJY3_13565 ef1972d331b1069908a78ba509a3a5f5 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 7.4E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 Gene3D G3DSA:1.20.1250.20 2 193 3.1E-28 T 14-10-2018 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 Pfam PF07690 Major Facilitator Superfamily 9 320 4.4E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 PRINTS PR01035 Tetracycline resistance protein signature 10 26 6.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 PRINTS PR01035 Tetracycline resistance protein signature 98 119 6.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 PRINTS PR01035 Tetracycline resistance protein signature 40 59 6.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 PRINTS PR01035 Tetracycline resistance protein signature 158 178 6.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 Gene3D G3DSA:1.20.1250.20 194 386 8.9E-23 T 14-10-2018 VEJY3_09080 255ca307c6c6e8adf0fc2e293cf2f357 394 SUPERFAMILY SSF103473 3 380 1.57E-64 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_22481 29fffd601a9dcad3a5c6dd28442d7ef0 204 SUPERFAMILY SSF53098 4 176 4.8E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_22481 29fffd601a9dcad3a5c6dd28442d7ef0 204 Gene3D G3DSA:3.30.420.10 2 176 7.3E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_22481 29fffd601a9dcad3a5c6dd28442d7ef0 204 Pfam PF00929 Exonuclease 8 163 4.8E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_22481 29fffd601a9dcad3a5c6dd28442d7ef0 204 SMART SM00479 6 173 9.2E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_13530 f8e274c151385d8c16c66bfea11535f8 417 SUPERFAMILY SSF109604 159 330 6.02E-28 T 14-10-2018 VEJY3_13530 f8e274c151385d8c16c66bfea11535f8 417 Gene3D G3DSA:1.10.3210.10 21 330 1.6E-55 T 14-10-2018 VEJY3_13530 f8e274c151385d8c16c66bfea11535f8 417 SMART SM00471 164 300 8.4E-7 T 14-10-2018 IPR003607 HD/PDEase domain VEJY3_13530 f8e274c151385d8c16c66bfea11535f8 417 Pfam PF01966 HD domain 170 290 3.7E-15 T 14-10-2018 IPR006674 HD domain VEJY3_13530 f8e274c151385d8c16c66bfea11535f8 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 7.0E-28 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 SMART SM00052 518 763 2.4E-103 T 14-10-2018 IPR001633 EAL domain VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 Gene3D G3DSA:3.20.20.450 521 772 7.5E-91 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 SUPERFAMILY SSF55073 352 510 7.38E-50 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 SUPERFAMILY SSF141868 523 770 1.03E-81 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 SMART SM00267 336 508 6.0E-54 T 14-10-2018 IPR000160 GGDEF domain VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 503 4.6E-46 T 14-10-2018 IPR000160 GGDEF domain VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 Gene3D G3DSA:3.30.70.270 341 520 2.4E-56 T 14-10-2018 VEJY3_23516 766822a1856b5b8e38642ea3fd450e93 774 Pfam PF00563 EAL domain 524 758 1.2E-67 T 14-10-2018 IPR001633 EAL domain VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 PIRSF PIRSF037167 2 307 6.0E-150 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.683 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 Gene3D G3DSA:3.40.50.150 109 281 1.3E-45 T 14-10-2018 VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 SUPERFAMILY SSF53335 16 293 6.54E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 Pfam PF05175 Methyltransferase small domain 135 216 1.6E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEJY3_11350 b75945da7ff55730651e377e595eccd4 310 Gene3D G3DSA:1.10.8.10 16 106 3.2E-5 T 14-10-2018 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 Gene3D G3DSA:1.10.10.10 5 94 6.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 Pfam PF03466 LysR substrate binding domain 87 293 3.9E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 Gene3D G3DSA:3.40.190.10 100 289 3.0E-34 T 14-10-2018 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 SUPERFAMILY SSF46785 2 82 1.03E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 SUPERFAMILY SSF53850 88 293 6.15E-23 T 14-10-2018 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 Gene3D G3DSA:3.40.190.10 159 262 3.0E-34 T 14-10-2018 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16766 db3888980e8946b2e43dfc629354acb7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 Pfam PF00759 Glycosyl hydrolase family 9 99 500 3.2E-25 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 Gene3D G3DSA:2.60.40.10 1 93 1.5E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 SUPERFAMILY SSF48208 88 565 5.53E-90 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 SUPERFAMILY SSF81296 2 83 8.4E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 82 2.9E-11 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VEJY3_12840 16653b5c938aa3039fd1d1445a48c0cc 573 Gene3D G3DSA:1.50.10.10 94 573 3.8E-231 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEJY3_14775 d1b4a1891419932b5cef58219ba7f6fa 164 Gene3D G3DSA:3.30.70.1730 1 124 9.8E-35 T 14-10-2018 VEJY3_14775 d1b4a1891419932b5cef58219ba7f6fa 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.994 T 14-10-2018 IPR022973 Ribosomal protein L10 VEJY3_14775 d1b4a1891419932b5cef58219ba7f6fa 164 Pfam PF00466 Ribosomal protein L10 5 101 7.2E-27 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VEJY3_14775 d1b4a1891419932b5cef58219ba7f6fa 164 SUPERFAMILY SSF160369 4 158 1.96E-44 T 14-10-2018 VEJY3_14775 d1b4a1891419932b5cef58219ba7f6fa 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_17626 26ac64cddf93a4d1846f85d9824c16be 192 Gene3D G3DSA:1.10.3820.10 10 188 1.1E-32 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEJY3_17626 26ac64cddf93a4d1846f85d9824c16be 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 2.2E-69 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEJY3_17626 26ac64cddf93a4d1846f85d9824c16be 192 SUPERFAMILY SSF48695 15 191 1.1E-54 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_17626 26ac64cddf93a4d1846f85d9824c16be 192 PIRSF PIRSF000013 1 192 5.1E-90 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VEJY3_23931 585970741c95bcf78b0b440527351dcb 128 SUPERFAMILY SSF51182 12 114 2.26E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_23931 585970741c95bcf78b0b440527351dcb 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 31.362 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_23931 585970741c95bcf78b0b440527351dcb 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 128 7.0E-50 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_23931 585970741c95bcf78b0b440527351dcb 128 Pfam PF06339 Ectoine synthase 1 122 6.9E-46 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_23931 585970741c95bcf78b0b440527351dcb 128 Gene3D G3DSA:2.60.120.10 1 116 8.0E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 Gene3D G3DSA:3.40.190.10 103 289 7.6E-58 T 14-10-2018 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 SUPERFAMILY SSF53850 96 291 2.9E-25 T 14-10-2018 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 Gene3D G3DSA:1.10.10.10 9 98 6.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 SUPERFAMILY SSF46785 4 117 1.36E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 Gene3D G3DSA:3.40.190.10 166 263 7.6E-58 T 14-10-2018 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02900 4344ee572819c8cfb555240d457acea1 296 Pfam PF03466 LysR substrate binding domain 95 291 3.1E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_06915 62d019c95b5d051fd5473ae54f59a307 157 Gene3D G3DSA:3.40.50.2300 1 134 9.2E-20 T 14-10-2018 VEJY3_06915 62d019c95b5d051fd5473ae54f59a307 157 SUPERFAMILY SSF52172 2 131 1.85E-20 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_06915 62d019c95b5d051fd5473ae54f59a307 157 Pfam PF00072 Response regulator receiver domain 7 125 1.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06915 62d019c95b5d051fd5473ae54f59a307 157 SMART SM00448 4 125 9.6E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_23866 5a1e83841c2a5ed103918062237b1110 115 SUPERFAMILY SSF55298 2 114 1.12E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_23866 5a1e83841c2a5ed103918062237b1110 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 109 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VEJY3_23866 5a1e83841c2a5ed103918062237b1110 115 Pfam PF01042 Endoribonuclease L-PSP 3 114 1.9E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEJY3_23866 5a1e83841c2a5ed103918062237b1110 115 Gene3D G3DSA:3.30.1330.40 1 115 3.0E-41 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEJY3_06270 ea11878038eec7195728944b3ce0e2df 81 Pfam PF03788 LrgA family 1 72 7.1E-19 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.8E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 Gene3D G3DSA:3.30.479.30 118 250 6.4E-22 T 14-10-2018 VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 SUPERFAMILY SSF117892 125 253 2.48E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 SMART SM00244 88 248 2.9E-52 T 14-10-2018 IPR001107 Band 7 domain VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 PRINTS PR00721 Stomatin signature 95 117 1.0E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 PRINTS PR00721 Stomatin signature 198 221 1.0E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 PRINTS PR00721 Stomatin signature 142 163 1.0E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VEJY3_14345 53508a691d7165bead6d7e99bf5c009e 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 3.0E-29 T 14-10-2018 IPR001107 Band 7 domain VEJY3_23036 9eb669ff6dd5fb89ca6a451b61756242 231 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 12 200 2.5E-29 T 14-10-2018 IPR008517 Protein of unknown function DUF799 VEJY3_23036 9eb669ff6dd5fb89ca6a451b61756242 231 Gene3D G3DSA:3.40.50.10610 31 191 1.6E-41 T 14-10-2018 VEJY3_16591 6575dfdc1cec60c12e1895690c234bd5 300 SUPERFAMILY SSF103481 50 139 3.4E-8 T 14-10-2018 VEJY3_16591 6575dfdc1cec60c12e1895690c234bd5 300 SUPERFAMILY SSF103481 200 298 2.48E-7 T 14-10-2018 VEJY3_19431 217c89009ca4fee063b4c807f047700c 365 SUPERFAMILY SSF51905 3 365 7.34E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19431 217c89009ca4fee063b4c807f047700c 365 Gene3D G3DSA:3.50.50.60 6 346 5.2E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_19431 217c89009ca4fee063b4c807f047700c 365 SUPERFAMILY SSF54373 228 306 2.22E-9 T 14-10-2018 VEJY3_19431 217c89009ca4fee063b4c807f047700c 365 Pfam PF01266 FAD dependent oxidoreductase 5 339 1.3E-50 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_19431 217c89009ca4fee063b4c807f047700c 365 Gene3D G3DSA:3.30.9.10 90 309 5.2E-76 T 14-10-2018 VEJY3_16636 6a0322da99197c53f34841c880ceaef6 172 Gene3D G3DSA:3.90.79.10 14 151 7.2E-26 T 14-10-2018 VEJY3_16636 6a0322da99197c53f34841c880ceaef6 172 SUPERFAMILY SSF55811 23 142 3.52E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_16636 6a0322da99197c53f34841c880ceaef6 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_16636 6a0322da99197c53f34841c880ceaef6 172 Pfam PF00293 NUDIX domain 23 143 6.0E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_00965 d8f7d9f8e1d356d6e20bd53581448efc 254 Pfam PF06251 Capsule biosynthesis GfcC 36 244 2.1E-19 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 PIRSF PIRSF004491 1 311 6.4E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 Gene3D G3DSA:3.40.50.620 1 187 2.5E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 SUPERFAMILY SSF52374 16 175 1.99E-36 T 14-10-2018 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 SMART SM00904 183 307 5.3E-64 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 SUPERFAMILY SSF82114 174 309 1.5E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 Pfam PF06574 FAD synthetase 12 167 2.0E-59 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 Gene3D G3DSA:2.40.30.30 188 311 4.5E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VEJY3_02405 6da60773c66d5b68638c6903c80e3149 311 Pfam PF01687 Riboflavin kinase 184 306 4.9E-39 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VEJY3_09480 9bc4b5a618d381e91ab32420ec314b23 133 Pfam PF02371 Transposase IS116/IS110/IS902 family 3 52 1.0E-7 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VEJY3_05555 92f5176087c8065e657862048a953f27 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.0E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 Gene3D G3DSA:3.40.190.10 6 219 1.1E-68 T 14-10-2018 VEJY3_05555 92f5176087c8065e657862048a953f27 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 1.6E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 6.0E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 SUPERFAMILY SSF54913 225 297 4.78E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_05555 92f5176087c8065e657862048a953f27 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.3E-44 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 Gene3D G3DSA:3.30.70.120 225 298 1.2E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEJY3_05555 92f5176087c8065e657862048a953f27 298 Gene3D G3DSA:3.40.190.10 102 191 1.1E-68 T 14-10-2018 VEJY3_05555 92f5176087c8065e657862048a953f27 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.162 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VEJY3_05555 92f5176087c8065e657862048a953f27 298 SUPERFAMILY SSF53850 5 222 4.67E-67 T 14-10-2018 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 Gene3D G3DSA:3.40.50.2000 475 797 5.1E-139 T 14-10-2018 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 SUPERFAMILY SSF53756 8 816 0.0 T 14-10-2018 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 Gene3D G3DSA:3.40.50.2000 5 474 2.0E-194 T 14-10-2018 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 PIRSF PIRSF000460 1 817 1.7E-214 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEJY3_23711 c5fdef3d1f2850673b35cc6be037ff2d 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEJY3_21666 e8a07654b28e261189ec2e054bbae5d0 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 41 527 3.1E-186 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_21666 e8a07654b28e261189ec2e054bbae5d0 535 ProSitePatterns PS01303 BCCT family of transporters signature. 344 353 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VEJY3_18606 53138068f89cfbf73798994c9a250a59 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 253 5.8E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_18606 53138068f89cfbf73798994c9a250a59 266 Gene3D G3DSA:1.10.3720.10 70 260 2.7E-34 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18606 53138068f89cfbf73798994c9a250a59 266 SUPERFAMILY SSF161098 74 258 1.44E-39 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 SUPERFAMILY SSF51658 6 418 7.08E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 244.621 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 10 419 2.0E-168 T 14-10-2018 VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 Gene3D G3DSA:3.20.20.150 1 419 5.5E-179 T 14-10-2018 VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 8 419 1.1E-216 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 VEJY3_02910 067df8e4d588843653b73d10aeb61c56 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 6 419 1.1E-215 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 VEJY3_03300 ab3c8de33ba7f54480e43cae469f488a 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.333 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VEJY3_03300 ab3c8de33ba7f54480e43cae469f488a 92 SUPERFAMILY SSF117991 7 92 7.32E-31 T 14-10-2018 IPR027471 YbeD-like domain superfamily VEJY3_03300 ab3c8de33ba7f54480e43cae469f488a 92 Gene3D G3DSA:3.30.70.260 6 92 7.7E-33 T 14-10-2018 VEJY3_03300 ab3c8de33ba7f54480e43cae469f488a 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 8.9E-29 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VEJY3_16731 e53d688b05bf6d29dcf6f107c52bd683 118 Gene3D G3DSA:3.10.180.10 6 117 1.7E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_16731 e53d688b05bf6d29dcf6f107c52bd683 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 1.0E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_16731 e53d688b05bf6d29dcf6f107c52bd683 118 SUPERFAMILY SSF54593 6 116 2.34E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_01480 be5fd4031ce15fe5f38a19fc7d37d984 165 Gene3D G3DSA:2.40.50.870 23 165 2.3E-45 T 14-10-2018 VEJY3_01480 be5fd4031ce15fe5f38a19fc7d37d984 165 Pfam PF11736 Protein of unknown function (DUF3299) 30 160 3.3E-43 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 VEJY3_13445 da4c9caf2ca89de3c75db5a760cbdf12 368 Gene3D G3DSA:3.40.50.300 99 354 5.9E-87 T 14-10-2018 VEJY3_13445 da4c9caf2ca89de3c75db5a760cbdf12 368 Gene3D G3DSA:3.30.450.90 1 97 2.3E-23 T 14-10-2018 VEJY3_13445 da4c9caf2ca89de3c75db5a760cbdf12 368 SUPERFAMILY SSF52540 4 334 1.16E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13445 da4c9caf2ca89de3c75db5a760cbdf12 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.7E-36 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.7E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 PIRSF PIRSF002401 1 375 7.7E-137 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 SUPERFAMILY SSF82051 2 157 6.8E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 Pfam PF01018 GTP1/OBG 4 156 1.6E-55 T 14-10-2018 IPR006169 GTP1/OBG domain VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 Gene3D G3DSA:3.40.50.300 159 336 1.6E-51 T 14-10-2018 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 SUPERFAMILY SSF52540 151 340 5.47E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.073 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VEJY3_01615 ca297644376b89e6c9bbb9b207e6dd64 391 Gene3D G3DSA:2.70.210.12 1 158 5.2E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VEJY3_08005 f1620bdd28e2be027e49835936aee62f 335 Gene3D G3DSA:3.40.190.10 29 330 1.2E-140 T 14-10-2018 VEJY3_08005 f1620bdd28e2be027e49835936aee62f 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 2.8E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEJY3_08005 f1620bdd28e2be027e49835936aee62f 335 Gene3D G3DSA:3.40.190.100 117 258 1.2E-140 T 14-10-2018 VEJY3_08005 f1620bdd28e2be027e49835936aee62f 335 SUPERFAMILY SSF53850 28 332 2.33E-90 T 14-10-2018 VEJY3_11955 babe668a5b0603539052fa33b9c52d0f 251 Pfam PF08241 Methyltransferase domain 70 125 4.6E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEJY3_11955 babe668a5b0603539052fa33b9c52d0f 251 Gene3D G3DSA:3.40.50.150 53 188 2.1E-14 T 14-10-2018 VEJY3_11955 babe668a5b0603539052fa33b9c52d0f 251 SUPERFAMILY SSF53335 73 212 1.47E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_04295 0de55bae96eca6406bb85dc7ce92eef7 310 Pfam PF03601 Conserved hypothetical protein 698 23 291 1.2E-55 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 Gene3D G3DSA:3.10.20.80 1 33 1.9E-14 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 SUPERFAMILY SSF55200 41 129 1.05E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 4.3E-14 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 SUPERFAMILY SSF54364 1 36 1.83E-13 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 Gene3D G3DSA:3.30.110.10 34 129 1.0E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VEJY3_06185 7f30146a348a5bfbfbdb3b4a3708473e 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 2.2E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VEJY3_08650 a565d59cbf23872ff9881dce247dde4b 295 SUPERFAMILY SSF103481 40 141 6.41E-11 T 14-10-2018 VEJY3_08650 a565d59cbf23872ff9881dce247dde4b 295 Pfam PF00892 EamA-like transporter family 146 278 2.7E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_08650 a565d59cbf23872ff9881dce247dde4b 295 Pfam PF00892 EamA-like transporter family 6 137 1.6E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_08650 a565d59cbf23872ff9881dce247dde4b 295 SUPERFAMILY SSF103481 182 280 6.8E-12 T 14-10-2018 VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Gene3D G3DSA:3.30.1660.40 24 113 1.8E-36 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Gene3D G3DSA:3.40.50.10610 114 290 3.4E-56 T 14-10-2018 VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Gene3D G3DSA:2.40.10.410 291 377 4.8E-37 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.2E-40 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 1.5E-27 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VEJY3_03505 16973f80ff770df2aa6da484f00be6f7 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.3E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VEJY3_02395 b2f006b5570d4096bdb3746500394e07 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 1.0E-35 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_02395 b2f006b5570d4096bdb3746500394e07 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.616 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_02395 b2f006b5570d4096bdb3746500394e07 86 SUPERFAMILY SSF46992 3 86 1.44E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_02395 b2f006b5570d4096bdb3746500394e07 86 Gene3D G3DSA:1.20.58.110 1 86 4.3E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_02395 b2f006b5570d4096bdb3746500394e07 86 Pfam PF01649 Ribosomal protein S20 2 84 6.9E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 Gene3D G3DSA:3.90.1150.10 256 390 5.5E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 9.2E-118 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 SUPERFAMILY SSF53383 22 388 4.79E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 Gene3D G3DSA:3.40.640.10 3 255 2.0E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.1E-172 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_05755 499cf8319f970c02e3e310ee5c033892 401 PIRSF PIRSF001434 1 391 2.9E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_17691 f988dd3239b7ead1b305aa4f9b78f52c 589 SMART SM00304 256 309 0.0018 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_17691 f988dd3239b7ead1b305aa4f9b78f52c 589 SUPERFAMILY SSF58104 277 586 3.75E-69 T 14-10-2018 VEJY3_17691 f988dd3239b7ead1b305aa4f9b78f52c 589 SMART SM00283 324 585 4.2E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_17691 f988dd3239b7ead1b305aa4f9b78f52c 589 Gene3D G3DSA:1.10.287.950 254 587 1.5E-64 T 14-10-2018 VEJY3_17691 f988dd3239b7ead1b305aa4f9b78f52c 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 551 5.2E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_06545 0b5d038e9b18a677b817dbcd89f88162 149 Gene3D G3DSA:2.40.40.10 47 140 3.9E-40 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_06545 0b5d038e9b18a677b817dbcd89f88162 149 Pfam PF03330 Lytic transglycolase 48 136 1.1E-27 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VEJY3_06545 0b5d038e9b18a677b817dbcd89f88162 149 SUPERFAMILY SSF50685 38 139 5.23E-17 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_06545 0b5d038e9b18a677b817dbcd89f88162 149 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 29 139 21.517 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VEJY3_07110 2f4c1e7e6816927bdda51a2f0e18d59e 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 5.8E-44 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 SUPERFAMILY SSF53067 9 129 1.6E-36 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 SUPERFAMILY SSF53067 134 304 2.59E-42 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 Gene3D G3DSA:3.30.420.40 11 299 1.8E-83 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 SUPERFAMILY SSF109604 309 495 1.69E-41 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 Gene3D G3DSA:1.10.3210.10 306 496 9.4E-48 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 Gene3D G3DSA:3.30.420.150 114 291 1.8E-83 T 14-10-2018 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 53.475 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 PIRSF PIRSF001267 1 497 5.5E-180 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VEJY3_15135 8e4b37dece1ae8073177a3c5a6a10d92 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 4.8E-88 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VEJY3_14665 b4189651ad81cacd882bb6a18f30418a 155 Pfam PF14352 Domain of unknown function (DUF4402) 23 136 3.4E-8 T 14-10-2018 IPR025514 Protein of unknown function DUF4402 VEJY3_04725 f95c17269cc7fcf7e88be3f3aa9c1b93 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.568 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VEJY3_04725 f95c17269cc7fcf7e88be3f3aa9c1b93 233 SUPERFAMILY SSF55729 79 231 1.15E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_04725 f95c17269cc7fcf7e88be3f3aa9c1b93 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.1E-20 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VEJY3_04725 f95c17269cc7fcf7e88be3f3aa9c1b93 233 PIRSF PIRSF037208 1 233 3.6E-88 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VEJY3_04725 f95c17269cc7fcf7e88be3f3aa9c1b93 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 226 6.6E-34 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VEJY3_19196 b723d158fd3ef3af7910c8b8a8495c8b 182 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 1.6E-14 T 14-10-2018 IPR000182 GNAT domain VEJY3_19196 b723d158fd3ef3af7910c8b8a8495c8b 182 SUPERFAMILY SSF55729 14 157 1.97E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_19196 b723d158fd3ef3af7910c8b8a8495c8b 182 Gene3D G3DSA:3.40.630.30 2 171 1.9E-28 T 14-10-2018 VEJY3_15185 89324853410011cd1e2a82c3321623fe 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 34 82 3.5E-23 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VEJY3_05895 faa448be98ff2abe7d50cfe69c1431a9 770 SUPERFAMILY SSF48695 292 757 1.22E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_05895 faa448be98ff2abe7d50cfe69c1431a9 770 Pfam PF14522 Cytochrome c7 and related cytochrome c 658 752 6.4E-6 T 14-10-2018 IPR029467 C-type polyheme cytochrome OmcB VEJY3_05895 faa448be98ff2abe7d50cfe69c1431a9 770 Gene3D G3DSA:3.90.10.10 284 387 5.8E-5 T 14-10-2018 VEJY3_05895 faa448be98ff2abe7d50cfe69c1431a9 770 SUPERFAMILY SSF48695 210 250 6.84E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 SUPERFAMILY SSF116726 231 287 1.83E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Pfam PF02080 TrkA-C domain 232 285 1.4E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Gene3D G3DSA:3.30.70.1450 229 291 1.2E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.795 T 14-10-2018 IPR023017 Transport protein YbjL, putative VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.0E-36 T 14-10-2018 IPR006512 YidE/YbjL duplication VEJY3_05955 f8bac7c2712ffa4751098e1627dc557c 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 4.9E-43 T 14-10-2018 IPR006512 YidE/YbjL duplication VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 Pfam PF07690 Major Facilitator Superfamily 34 401 5.4E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 Gene3D G3DSA:1.20.1250.20 18 227 1.0E-57 T 14-10-2018 VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 PIRSF PIRSF002808 5 453 1.0E-168 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 SUPERFAMILY SSF103473 13 447 2.35E-86 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_12385 a4355d17bb76e1c6ae89c796bdc358b0 454 Gene3D G3DSA:1.20.1250.20 241 452 1.8E-62 T 14-10-2018 VEJY3_14615 45d809436bca6d0111e7ba9547bac365 209 Gene3D G3DSA:3.30.420.10 24 201 6.3E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_14615 45d809436bca6d0111e7ba9547bac365 209 SUPERFAMILY SSF53098 27 198 2.82E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_14615 45d809436bca6d0111e7ba9547bac365 209 SMART SM00479 29 202 3.0E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_14615 45d809436bca6d0111e7ba9547bac365 209 Pfam PF00929 Exonuclease 31 193 7.2E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_20561 19a65c67174e3dc6ff55f82e0dfb6210 288 Pfam PF01040 UbiA prenyltransferase family 18 269 1.6E-55 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEJY3_20561 19a65c67174e3dc6ff55f82e0dfb6210 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.978 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEJY3_20561 19a65c67174e3dc6ff55f82e0dfb6210 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site VEJY3_20561 19a65c67174e3dc6ff55f82e0dfb6210 288 Gene3D G3DSA:1.10.357.140 13 182 5.7E-18 T 14-10-2018 VEJY3_16051 63943404804c50797cba49eee43c345c 211 Gene3D G3DSA:3.40.1400.10 1 211 4.1E-99 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEJY3_16051 63943404804c50797cba49eee43c345c 211 SUPERFAMILY SSF89623 1 160 6.67E-34 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEJY3_16051 63943404804c50797cba49eee43c345c 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 4.4E-27 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEJY3_16051 63943404804c50797cba49eee43c345c 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 5.0E-21 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 SUPERFAMILY SSF55120 9 247 5.76E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.4E-56 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 1.4E-19 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Gene3D G3DSA:3.30.2350.10 1 248 3.0E-95 T 14-10-2018 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 SUPERFAMILY SSF88697 250 310 5.96E-15 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.936 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.1E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VEJY3_12680 a007c7c69fc0db2626dc2e57b4e60c11 314 Gene3D G3DSA:2.30.130.10 249 311 3.8E-23 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEJY3_18286 140627d109c46c9ca596cad49e826503 258 Gene3D G3DSA:3.20.20.150 1 258 9.3E-80 T 14-10-2018 VEJY3_18286 140627d109c46c9ca596cad49e826503 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 4.6E-34 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_18286 140627d109c46c9ca596cad49e826503 258 PIRSF PIRSF006241 1 258 3.1E-99 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like VEJY3_18286 140627d109c46c9ca596cad49e826503 258 SUPERFAMILY SSF51658 1 258 5.11E-83 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 Gene3D G3DSA:2.40.30.170 51 301 8.1E-110 T 14-10-2018 VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 6.6E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 Gene3D G3DSA:1.10.287.470 98 171 8.1E-110 T 14-10-2018 VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 Gene3D G3DSA:2.40.50.100 63 207 8.1E-110 T 14-10-2018 VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 SUPERFAMILY SSF111369 51 297 4.32E-82 T 14-10-2018 VEJY3_05365 6aa604352e3c9cdb2f252007fed78cd8 379 Gene3D G3DSA:2.40.420.20 302 371 8.1E-110 T 14-10-2018 VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 Gene3D G3DSA:1.10.10.10 4 91 2.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 SUPERFAMILY SSF46785 8 86 2.35E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 Pfam PF03466 LysR substrate binding domain 94 292 2.5E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 SUPERFAMILY SSF53850 94 293 1.59E-22 T 14-10-2018 VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 Gene3D G3DSA:3.40.190.10 94 274 1.4E-19 T 14-10-2018 VEJY3_20471 6b2e0ef16c40ed26918f61949838f8ee 296 Gene3D G3DSA:3.40.190.10 166 269 1.4E-19 T 14-10-2018 VEJY3_19066 e58a493ddd225610e34ee0b76a490d9e 434 Pfam PF13584 Oxygen tolerance 64 295 7.0E-25 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VEJY3_04255 cb790b9b61653236988cce86d8fbb239 404 Gene3D G3DSA:3.40.640.10 53 294 1.3E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_04255 cb790b9b61653236988cce86d8fbb239 404 Gene3D G3DSA:3.90.1150.10 21 398 1.3E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_04255 cb790b9b61653236988cce86d8fbb239 404 Pfam PF00155 Aminotransferase class I and II 61 391 2.4E-46 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_04255 cb790b9b61653236988cce86d8fbb239 404 SUPERFAMILY SSF53383 5 399 3.5E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 SMART SM00642 203 656 3.6E-79 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 SUPERFAMILY SSF51445 190 665 5.49E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 PIRSF PIRSF036917 1 694 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 Gene3D G3DSA:3.20.20.80 189 437 2.6E-42 T 14-10-2018 VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 9.3E-39 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_00090 e10e8a4c7d410659f6aaa708c9ee2181 694 Gene3D G3DSA:3.20.20.80 438 664 7.2E-38 T 14-10-2018 VEJY3_04530 52a0e0eea6ac4ae54e1c44e18eb908b9 414 Pfam PF12704 MacB-like periplasmic core domain 30 222 1.3E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_04530 52a0e0eea6ac4ae54e1c44e18eb908b9 414 Pfam PF02687 FtsX-like permease family 301 407 2.9E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_23466 fc294b64d699039e491ac87553201934 563 Pfam PF02652 L-lactate permease 7 548 4.4E-106 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VEJY3_11535 1e15d2564899d4e79b940454bde1bcc8 141 Pfam PF04347 Flagellar biosynthesis protein, FliO 58 135 2.2E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VEJY3_11535 1e15d2564899d4e79b940454bde1bcc8 141 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 46 113 1.6E-22 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VEJY3_19621 76f143d11d6266c4b816c912920bb99f 364 SUPERFAMILY SSF53901 7 325 1.27E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_19621 76f143d11d6266c4b816c912920bb99f 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.7E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_19621 76f143d11d6266c4b816c912920bb99f 364 Gene3D G3DSA:3.40.47.10 1 362 4.3E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_19621 76f143d11d6266c4b816c912920bb99f 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 65.974 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_19621 76f143d11d6266c4b816c912920bb99f 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 9.7E-38 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEJY3_05010 c9bd88737f4a702ae23a29d7eccf2b48 149 Pfam PF06610 L-alanine exporter 8 142 1.1E-69 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEJY3_05010 c9bd88737f4a702ae23a29d7eccf2b48 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.181 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEJY3_05010 c9bd88737f4a702ae23a29d7eccf2b48 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 8.0E-66 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEJY3_19581 4859fe0e5090a7da9d4620946604f8c1 146 Pfam PF13778 Domain of unknown function (DUF4174) 26 136 2.9E-24 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 345 355 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 SUPERFAMILY SSF52743 126 375 1.06E-68 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 SUPERFAMILY SSF49299 398 501 1.44E-22 T 14-10-2018 IPR035986 PKD domain superfamily VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Pfam PF00801 PKD domain 434 490 2.0E-11 T 14-10-2018 IPR000601 PKD domain VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 131 142 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 344 360 4.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 182 4.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 126 145 4.5E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 SMART SM00089 421 504 4.0E-18 T 14-10-2018 IPR022409 PKD/Chitinase domain VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Gene3D G3DSA:3.30.70.80 26 90 3.8E-11 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Gene3D G3DSA:3.40.50.200 91 395 1.0E-79 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Gene3D G3DSA:2.60.40.10 414 505 1.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Pfam PF00082 Subtilase family 129 379 2.4E-48 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 173 183 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 SUPERFAMILY SSF54897 29 96 2.72E-9 T 14-10-2018 VEJY3_20426 2a2d660d8454bc05c14faafcc08ea87c 596 Pfam PF05922 Peptidase inhibitor I9 54 97 2.0E-4 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEJY3_00375 fcd496771a8e43c26771aa135bf3e8ca 256 Pfam PF14559 Tetratricopeptide repeat 153 208 1.7E-6 T 14-10-2018 VEJY3_00375 fcd496771a8e43c26771aa135bf3e8ca 256 Pfam PF13428 Tetratricopeptide repeat 36 75 1.4E-5 T 14-10-2018 VEJY3_00375 fcd496771a8e43c26771aa135bf3e8ca 256 Gene3D G3DSA:1.25.40.10 22 139 3.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00375 fcd496771a8e43c26771aa135bf3e8ca 256 Gene3D G3DSA:1.25.40.10 140 249 1.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_00375 fcd496771a8e43c26771aa135bf3e8ca 256 SUPERFAMILY SSF48452 38 233 2.54E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_17501 b8cf403e9fb7b24f82b4f1efb0028865 327 Gene3D G3DSA:3.30.360.10 135 325 5.3E-51 T 14-10-2018 VEJY3_17501 b8cf403e9fb7b24f82b4f1efb0028865 327 SUPERFAMILY SSF55347 127 289 7.85E-21 T 14-10-2018 VEJY3_17501 b8cf403e9fb7b24f82b4f1efb0028865 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.8E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_17501 b8cf403e9fb7b24f82b4f1efb0028865 327 Gene3D G3DSA:3.40.50.720 1 134 5.4E-37 T 14-10-2018 VEJY3_17501 b8cf403e9fb7b24f82b4f1efb0028865 327 SUPERFAMILY SSF51735 2 134 1.97E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22176 424bcec2b7bb6be928a155eb25aadc22 374 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 231 5.9E-28 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_22176 424bcec2b7bb6be928a155eb25aadc22 374 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 232 350 3.1E-16 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_22176 424bcec2b7bb6be928a155eb25aadc22 374 SUPERFAMILY SSF56935 22 371 1.92E-53 T 14-10-2018 VEJY3_22176 424bcec2b7bb6be928a155eb25aadc22 374 Gene3D G3DSA:2.40.160.60 22 374 2.7E-61 T 14-10-2018 VEJY3_12150 a90ee0747f9a45f1973b87f4c91327b1 239 Gene3D G3DSA:3.30.2310.10 143 235 2.9E-20 T 14-10-2018 VEJY3_12150 a90ee0747f9a45f1973b87f4c91327b1 239 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VEJY3_12150 a90ee0747f9a45f1973b87f4c91327b1 239 Pfam PF01980 Uncharacterised protein family UPF0066 22 144 3.5E-39 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VEJY3_12150 a90ee0747f9a45f1973b87f4c91327b1 239 Gene3D G3DSA:2.40.30.70 1 142 9.5E-43 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily VEJY3_12150 a90ee0747f9a45f1973b87f4c91327b1 239 SUPERFAMILY SSF118196 4 234 7.06E-80 T 14-10-2018 IPR036413 YaeB-like superfamily VEJY3_01120 8673247d774c06013d709b0079c95ee4 376 Gene3D G3DSA:3.40.50.2000 7 363 8.7E-75 T 14-10-2018 VEJY3_01120 8673247d774c06013d709b0079c95ee4 376 Gene3D G3DSA:3.40.50.2000 168 362 8.7E-75 T 14-10-2018 VEJY3_01120 8673247d774c06013d709b0079c95ee4 376 SUPERFAMILY SSF53756 5 375 1.6E-71 T 14-10-2018 VEJY3_01120 8673247d774c06013d709b0079c95ee4 376 Pfam PF13439 Glycosyltransferase Family 4 17 171 3.4E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_01120 8673247d774c06013d709b0079c95ee4 376 Pfam PF00534 Glycosyl transferases group 1 179 353 4.2E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_12420 967bd6f6c6c9d0db1f9c810d7ac46e02 183 Gene3D G3DSA:3.10.490.10 1 121 8.7E-8 T 14-10-2018 VEJY3_12420 967bd6f6c6c9d0db1f9c810d7ac46e02 183 SUPERFAMILY SSF110857 1 124 2.22E-16 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VEJY3_12420 967bd6f6c6c9d0db1f9c810d7ac46e02 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 5.1E-8 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VEJY3_13055 14d9caf9612d3198531013817d128c24 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 5.3E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VEJY3_13055 14d9caf9612d3198531013817d128c24 64 SUPERFAMILY SSF57716 2 62 8.55E-21 T 14-10-2018 VEJY3_13055 14d9caf9612d3198531013817d128c24 64 Gene3D G3DSA:3.30.50.10 1 64 2.5E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VEJY3_13055 14d9caf9612d3198531013817d128c24 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.348 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 Gene3D G3DSA:1.20.810.10 1 421 2.2E-149 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 SUPERFAMILY SSF81648 297 412 2.62E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.5E-40 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 8.3E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 SUPERFAMILY SSF81342 6 296 2.04E-92 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEJY3_01990 941232bce8d91c0f21442d5cb0c9583f 421 PIRSF PIRSF038885 1 421 7.6E-152 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 SUPERFAMILY SSF53901 4 263 1.98E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 Gene3D G3DSA:3.40.47.10 8 271 1.4E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 Gene3D G3DSA:3.40.47.10 138 385 1.4E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 SUPERFAMILY SSF53901 266 390 2.08E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 2.0E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.0E-49 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 PIRSF PIRSF000429 2 391 2.3E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 VEJY3_00135 edc1b39ede4362c73fffcbb4f776fb60 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.724 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VEJY3_14860 8d4b33c243dad8736ee61f52de62308e 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 2.0E-57 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VEJY3_14860 8d4b33c243dad8736ee61f52de62308e 123 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 4.7E-50 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 PRINTS PR01438 Universal stress protein signature 102 114 5.2E-7 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 PRINTS PR01438 Universal stress protein signature 3 21 5.2E-7 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 PRINTS PR01438 Universal stress protein signature 119 141 5.2E-7 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 Gene3D G3DSA:3.40.50.620 1 141 3.3E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 Pfam PF00582 Universal stress protein family 4 141 1.5E-12 T 14-10-2018 IPR006016 UspA VEJY3_21561 f477cb0919ba072b978826fee312b0f8 145 SUPERFAMILY SSF52402 1 143 4.6E-16 T 14-10-2018 VEJY3_08310 9b8f35ba4c17d31a4bf7141a99485bbd 184 Pfam PF12570 Protein of unknown function (DUF3750) 50 182 2.1E-49 T 14-10-2018 IPR022224 Protein of unknown function DUF3750 VEJY3_17826 37a78b284741fc6e17e6f1dc074a070c 212 Pfam PF13460 NAD(P)H-binding 8 189 9.9E-53 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_17826 37a78b284741fc6e17e6f1dc074a070c 212 Gene3D G3DSA:3.40.50.720 1 212 5.2E-60 T 14-10-2018 VEJY3_17826 37a78b284741fc6e17e6f1dc074a070c 212 SUPERFAMILY SSF51735 1 191 4.23E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08160 028892e94692ca30da160ff64210ad54 253 SUPERFAMILY SSF53474 3 244 7.09E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_08160 028892e94692ca30da160ff64210ad54 253 Pfam PF00561 alpha/beta hydrolase fold 3 116 1.7E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_08160 028892e94692ca30da160ff64210ad54 253 Gene3D G3DSA:3.40.50.1820 2 247 5.1E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 Gene3D G3DSA:1.10.10.10 2 157 3.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 Pfam PF12802 MarR family 49 110 4.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 SUPERFAMILY SSF46785 17 156 1.2E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 8.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 8.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 8.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 8.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 SMART SM00347 44 146 1.7E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_16991 d10cb86d3814424d91d11869a811f88d 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 Gene3D G3DSA:2.60.120.10 356 467 2.4E-17 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 466 9.2E-221 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 SUPERFAMILY SSF53448 4 282 2.82E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 Gene3D G3DSA:3.90.550.10 3 351 1.9E-117 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 SUPERFAMILY SSF51182 186 469 2.18E-81 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 Pfam PF00483 Nucleotidyl transferase 6 287 2.4E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEJY3_01045 0256a25198cdafe80bb0eed7f846f884 471 Pfam PF01050 Mannose-6-phosphate isomerase 316 466 3.0E-65 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 Gene3D G3DSA:3.40.50.300 33 293 9.4E-81 T 14-10-2018 VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 SUPERFAMILY SSF54631 274 392 3.28E-14 T 14-10-2018 VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 Pfam PF00571 CBS domain 348 393 1.1E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 SMART SM00382 53 242 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 Gene3D G3DSA:3.10.580.10 294 394 7.1E-10 T 14-10-2018 VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 SUPERFAMILY SSF52540 40 272 3.33E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07995 af76f4e73eeebc7e8755d327b964d548 395 Pfam PF00005 ABC transporter 45 192 5.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23811 ced277b20043c91877d6559e5f287150 676 Gene3D G3DSA:2.40.170.20 170 676 1.2E-124 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_23811 ced277b20043c91877d6559e5f287150 676 Pfam PF00593 TonB dependent receptor 204 673 7.9E-54 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_23811 ced277b20043c91877d6559e5f287150 676 SUPERFAMILY SSF56935 33 676 9.68E-127 T 14-10-2018 VEJY3_23811 ced277b20043c91877d6559e5f287150 676 Gene3D G3DSA:2.170.130.10 32 164 5.5E-41 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_23811 ced277b20043c91877d6559e5f287150 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 159 1.3E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_22271 c608445ad7e007b6baa129bf7812bc73 374 SUPERFAMILY SSF54373 217 316 2.24E-17 T 14-10-2018 VEJY3_22271 c608445ad7e007b6baa129bf7812bc73 374 Gene3D G3DSA:3.50.50.60 4 359 3.6E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_22271 c608445ad7e007b6baa129bf7812bc73 374 Pfam PF01266 FAD dependent oxidoreductase 4 355 5.4E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_22271 c608445ad7e007b6baa129bf7812bc73 374 Gene3D G3DSA:3.30.9.10 59 316 3.6E-126 T 14-10-2018 VEJY3_22271 c608445ad7e007b6baa129bf7812bc73 374 SUPERFAMILY SSF51905 2 373 3.88E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06585 fcf28c10a621d71267585128176e476d 318 Pfam PF02574 Homocysteine S-methyltransferase 18 309 2.3E-32 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VEJY3_06585 fcf28c10a621d71267585128176e476d 318 SUPERFAMILY SSF82282 7 310 1.57E-44 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_06585 fcf28c10a621d71267585128176e476d 318 Gene3D G3DSA:3.20.20.330 4 309 2.9E-27 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEJY3_24211 958f2719bf6928bd45840448218b509c 231 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_24211 958f2719bf6928bd45840448218b509c 231 Pfam PF00005 ABC transporter 25 170 5.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24211 958f2719bf6928bd45840448218b509c 231 Gene3D G3DSA:3.40.50.300 4 229 1.6E-58 T 14-10-2018 VEJY3_24211 958f2719bf6928bd45840448218b509c 231 SMART SM00382 34 230 2.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24211 958f2719bf6928bd45840448218b509c 231 SUPERFAMILY SSF52540 5 223 1.26E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14225 60b8f67af2341e29104eb137ba896d42 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 3.1E-21 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 Gene3D G3DSA:3.40.190.10 30 250 1.4E-62 T 14-10-2018 VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 SMART SM00062 33 257 1.9E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 SUPERFAMILY SSF53850 1 256 6.26E-50 T 14-10-2018 VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 Gene3D G3DSA:3.40.190.10 120 215 1.4E-62 T 14-10-2018 VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 1.4E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_15430 3966e24f24f51f096ff60b0f506271ca 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 PIRSF PIRSF003196 1 99 1.4E-39 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 Gene3D G3DSA:1.10.1270.10 1 98 1.1E-33 T 14-10-2018 IPR038116 TrpR-like superfamily VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.839 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 82 1.0E-36 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 SUPERFAMILY SSF48295 2 95 3.19E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEJY3_02495 b5d51f85cc7fd6ee7e524e397111ea3b 99 Pfam PF01371 Trp repressor protein 9 94 3.1E-33 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VEJY3_22351 043bfe957b0a89311a195f2a6dd878e5 247 Gene3D G3DSA:3.40.50.1820 17 244 2.5E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_22351 043bfe957b0a89311a195f2a6dd878e5 247 SUPERFAMILY SSF53474 23 241 1.21E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_22351 043bfe957b0a89311a195f2a6dd878e5 247 Pfam PF01738 Dienelactone hydrolase family 37 242 5.8E-39 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 Gene3D G3DSA:1.25.40.10 31 351 1.7E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 9.2E-33 T 14-10-2018 IPR000160 GGDEF domain VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 SUPERFAMILY SSF48452 34 191 4.55E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 SUPERFAMILY SSF48452 170 314 3.21E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 SUPERFAMILY SSF55073 374 524 1.49E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 Gene3D G3DSA:3.30.70.270 355 526 5.6E-43 T 14-10-2018 VEJY3_23391 02f28b4a0e941844920d966e31b0a073 527 SMART SM00267 358 526 1.9E-31 T 14-10-2018 IPR000160 GGDEF domain VEJY3_22741 cd192eafed9cec24fbb1e213cbaad550 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 62 1.9E-15 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 3.7E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 SUPERFAMILY SSF50129 9 183 6.7E-35 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 Gene3D G3DSA:3.40.50.720 154 289 1.3E-78 T 14-10-2018 VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 SUPERFAMILY SSF51735 143 306 2.84E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 105 5.5E-12 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_17271 85249636b444a7edb6250e760acb78ee 352 Gene3D G3DSA:3.90.180.10 14 329 1.3E-78 T 14-10-2018 VEJY3_19906 ad41f4527476f664f139d8a1f72b7758 230 Gene3D G3DSA:3.40.50.300 9 229 4.3E-70 T 14-10-2018 VEJY3_19906 ad41f4527476f664f139d8a1f72b7758 230 Pfam PF00005 ABC transporter 30 176 4.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_19906 ad41f4527476f664f139d8a1f72b7758 230 SUPERFAMILY SSF52540 12 228 1.49E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19906 ad41f4527476f664f139d8a1f72b7758 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_19906 ad41f4527476f664f139d8a1f72b7758 230 SMART SM00382 39 228 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21721 ad328238929830683e6d7df52c09c4ad 384 SUPERFAMILY SSF56281 123 370 2.38E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_21721 ad328238929830683e6d7df52c09c4ad 384 Gene3D G3DSA:3.60.15.10 113 382 3.3E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_21721 ad328238929830683e6d7df52c09c4ad 384 Pfam PF12706 Beta-lactamase superfamily domain 138 331 2.1E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_02555 96ef46db05de78af3db1b11013de929a 333 Pfam PF09084 NMT1/THI5 like 41 254 1.9E-47 T 14-10-2018 IPR015168 SsuA/THI5-like VEJY3_02555 96ef46db05de78af3db1b11013de929a 333 Gene3D G3DSA:3.40.190.10 111 216 5.0E-63 T 14-10-2018 VEJY3_02555 96ef46db05de78af3db1b11013de929a 333 SUPERFAMILY SSF53850 27 259 1.32E-38 T 14-10-2018 VEJY3_02555 96ef46db05de78af3db1b11013de929a 333 Gene3D G3DSA:3.40.190.10 31 306 5.0E-63 T 14-10-2018 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 SMART SM00422 1 70 8.4E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 Gene3D G3DSA:1.10.1660.10 1 125 1.2E-32 T 14-10-2018 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 SUPERFAMILY SSF46955 1 126 1.79E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.2E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.2E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.2E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18976 ffb27e8d5dfcfd48a61a276575a4571d 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_20956 6ed4db5a84c4506725dd646dc7994fc0 395 Gene3D G3DSA:3.40.50.1100 40 383 1.2E-126 T 14-10-2018 VEJY3_20956 6ed4db5a84c4506725dd646dc7994fc0 395 Gene3D G3DSA:3.40.50.1100 75 193 1.2E-126 T 14-10-2018 VEJY3_20956 6ed4db5a84c4506725dd646dc7994fc0 395 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 42 357 1.0E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_20956 6ed4db5a84c4506725dd646dc7994fc0 395 SUPERFAMILY SSF53686 41 353 1.01E-61 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_05930 2b14a14e7c6e0b463aef5532cf86d6f1 373 SUPERFAMILY SSF159245 55 373 3.79E-93 T 14-10-2018 VEJY3_05930 2b14a14e7c6e0b463aef5532cf86d6f1 373 Pfam PF07143 CrtC N-terminal lipocalin domain 78 247 6.8E-44 T 14-10-2018 IPR010791 AttH domain VEJY3_05930 2b14a14e7c6e0b463aef5532cf86d6f1 373 Gene3D G3DSA:2.40.370.10 66 250 7.9E-54 T 14-10-2018 IPR023374 AttH-like domain superfamily VEJY3_05930 2b14a14e7c6e0b463aef5532cf86d6f1 373 Pfam PF17186 Lipocalin-like domain 251 373 2.5E-33 T 14-10-2018 VEJY3_05930 2b14a14e7c6e0b463aef5532cf86d6f1 373 Gene3D G3DSA:2.40.370.10 252 373 3.1E-23 T 14-10-2018 IPR023374 AttH-like domain superfamily VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 Gene3D G3DSA:3.40.50.300 445 635 1.5E-36 T 14-10-2018 VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 SMART SM00487 17 310 0.0021 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 SUPERFAMILY SSF52540 42 601 1.41E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 SUPERFAMILY SSF52540 14 238 1.32E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 Gene3D G3DSA:3.40.50.300 19 286 4.0E-49 T 14-10-2018 VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 SMART SM00491 477 606 8.7E-46 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 2.7E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEJY3_03940 791f1f65acf388bc8938b564693eb5d2 636 Pfam PF13307 Helicase C-terminal domain 462 619 7.7E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 Pfam PF00664 ABC transporter transmembrane region 17 258 4.7E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 Gene3D G3DSA:3.40.50.300 314 546 2.7E-53 T 14-10-2018 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 SUPERFAMILY SSF90123 5 311 1.23E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 SUPERFAMILY SSF52540 328 543 7.79E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 Gene3D G3DSA:1.20.1560.10 1 313 1.7E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 Pfam PF00005 ABC transporter 349 495 8.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_00410 34ad255739a5a6a95df3c1338b465954 548 SMART SM00382 357 544 3.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23821 c52d2f8b27415fdf8946cb335ce8dddc 306 SUPERFAMILY SSF53807 23 290 1.26E-63 T 14-10-2018 VEJY3_23821 c52d2f8b27415fdf8946cb335ce8dddc 306 Gene3D G3DSA:3.40.50.1980 29 284 1.3E-84 T 14-10-2018 VEJY3_23821 c52d2f8b27415fdf8946cb335ce8dddc 306 Gene3D G3DSA:3.40.50.1980 172 278 1.3E-84 T 14-10-2018 VEJY3_23821 c52d2f8b27415fdf8946cb335ce8dddc 306 Pfam PF01497 Periplasmic binding protein 44 280 7.5E-36 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 Gene3D G3DSA:1.10.10.10 8 99 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 SUPERFAMILY SSF46785 10 115 2.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 Gene3D G3DSA:3.40.190.10 100 288 2.8E-45 T 14-10-2018 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 Gene3D G3DSA:3.40.190.10 170 274 2.8E-45 T 14-10-2018 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 SUPERFAMILY SSF53850 94 301 1.97E-35 T 14-10-2018 VEJY3_20926 79f391f84d62dd046f9365ddc876620a 308 Pfam PF03466 LysR substrate binding domain 93 298 4.3E-33 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 Pfam PF00005 ABC transporter 38 189 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 SUPERFAMILY SSF52540 31 261 2.13E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 SMART SM00382 46 239 1.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 1.3E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_10845 3b69c3c0b6a7eb120f8d80a0e04050a3 330 Gene3D G3DSA:3.40.50.300 6 330 2.4E-98 T 14-10-2018 VEJY3_08185 f221ef4325d31bc0c9d35a74b903b1af 683 Pfam PF04632 Fusaric acid resistance protein family 16 677 6.3E-136 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEJY3_18391 aaab3ca9b486b8d4ca5fdf0f3a0c6b63 250 SUPERFAMILY SSF52402 2 242 2.37E-81 T 14-10-2018 VEJY3_18391 aaab3ca9b486b8d4ca5fdf0f3a0c6b63 250 PIRSF PIRSF000090 1 249 5.1E-82 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VEJY3_18391 aaab3ca9b486b8d4ca5fdf0f3a0c6b63 250 SMART SM00893 23 211 1.5E-66 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_18391 aaab3ca9b486b8d4ca5fdf0f3a0c6b63 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 8.6E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEJY3_18391 aaab3ca9b486b8d4ca5fdf0f3a0c6b63 250 Gene3D G3DSA:3.40.50.620 1 248 9.6E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_23566 fbbcf1c6a9efab2432ffa6557e14ec51 146 Gene3D G3DSA:1.20.120.10 35 143 1.4E-13 T 14-10-2018 VEJY3_23566 fbbcf1c6a9efab2432ffa6557e14ec51 146 Pfam PF07361 Cytochrome b562 41 136 5.4E-29 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VEJY3_23566 fbbcf1c6a9efab2432ffa6557e14ec51 146 SUPERFAMILY SSF47175 41 136 2.82E-29 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Gene3D G3DSA:3.40.1190.10 91 313 5.5E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Pfam PF08245 Mur ligase middle domain 108 291 1.6E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Gene3D G3DSA:3.90.190.20 314 450 1.8E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.2E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 4.4E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Gene3D G3DSA:3.40.50.720 1 90 1.1E-35 T 14-10-2018 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 SUPERFAMILY SSF51984 1 89 1.16E-22 T 14-10-2018 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 SUPERFAMILY SSF53623 97 308 7.98E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.981 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VEJY3_01545 f048ca5e4c2865740280e1b0dece79f7 452 SUPERFAMILY SSF53244 311 448 7.17E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_22876 54d1e7f97f0c27ceb283d05decc0116b 577 Pfam PF00474 Sodium:solute symporter family 36 432 2.6E-55 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_22876 54d1e7f97f0c27ceb283d05decc0116b 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 434 9.0E-77 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_22876 54d1e7f97f0c27ceb283d05decc0116b 577 Gene3D G3DSA:1.20.1730.10 25 500 4.5E-113 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_24181 2fef56e21592420fa7205e38ee65623f 283 Pfam PF00005 ABC transporter 28 183 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_24181 2fef56e21592420fa7205e38ee65623f 283 SMART SM00382 37 234 8.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_24181 2fef56e21592420fa7205e38ee65623f 283 SUPERFAMILY SSF52540 7 241 1.88E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24181 2fef56e21592420fa7205e38ee65623f 283 Gene3D G3DSA:3.40.50.300 4 264 2.1E-59 T 14-10-2018 VEJY3_24181 2fef56e21592420fa7205e38ee65623f 283 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 Gene3D G3DSA:1.10.1060.10 105 236 9.7E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 14-10-2018 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 SUPERFAMILY SSF54292 1 104 4.18E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 Gene3D G3DSA:3.10.20.30 1 104 4.1E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 SUPERFAMILY SSF46548 105 233 4.01E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 2.0E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03850 ce0b0684d7b3ed3a51d67745e0e29cf3 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.4E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 SUPERFAMILY SSF50249 3 68 7.93E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 PIRSF PIRSF002599 1 69 2.2E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 Gene3D G3DSA:2.40.50.140 1 68 2.2E-29 T 14-10-2018 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 SMART SM00357 5 69 2.8E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 1.2E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 PRINTS PR00050 Cold shock protein signature 27 36 2.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 PRINTS PR00050 Cold shock protein signature 42 60 2.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_17356 fa03820565d4e13410e7bc6436bbd5b0 69 PRINTS PR00050 Cold shock protein signature 6 21 2.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_21216 f0bc29c75eda4c54bc033f5ef73474ce 226 SUPERFAMILY SSF54637 81 221 2.11E-30 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_21216 f0bc29c75eda4c54bc033f5ef73474ce 226 Gene3D G3DSA:3.10.129.10 75 225 9.5E-36 T 14-10-2018 VEJY3_21216 f0bc29c75eda4c54bc033f5ef73474ce 226 Pfam PF01575 MaoC like domain 84 201 1.7E-21 T 14-10-2018 IPR002539 MaoC-like dehydratase domain VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 PRINTS PR00207 Flagellin signature 76 95 1.7E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 PRINTS PR00207 Flagellin signature 111 134 1.7E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 PRINTS PR00207 Flagellin signature 37 54 1.7E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Gene3D G3DSA:1.20.1330.10 44 333 7.4E-76 T 14-10-2018 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Gene3D G3DSA:3.30.70.2120 174 282 7.4E-76 T 14-10-2018 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 9.6E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Pfam PF07196 Flagellin hook IN motif 195 252 6.6E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.4E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 Gene3D G3DSA:1.10.8.410 334 384 3.0E-21 T 14-10-2018 VEJY3_03600 37cc7a46f791e4cf655eeeb664b48d24 384 SUPERFAMILY SSF64518 1 384 5.75E-97 T 14-10-2018 VEJY3_08505 784f714a44e084d1041c6e4bd85a0d5e 189 Gene3D G3DSA:3.30.70.1710 1 117 1.6E-31 T 14-10-2018 VEJY3_08505 784f714a44e084d1041c6e4bd85a0d5e 189 SUPERFAMILY SSF143414 6 92 1.09E-23 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08505 784f714a44e084d1041c6e4bd85a0d5e 189 Pfam PF00936 BMC domain 7 82 2.2E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08505 784f714a44e084d1041c6e4bd85a0d5e 189 SMART SM00877 6 83 1.2E-27 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 Pfam PF01979 Amidohydrolase family 51 374 6.0E-35 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 SUPERFAMILY SSF51338 1 53 9.99E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 Gene3D G3DSA:2.30.40.10 6 373 2.9E-142 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 Gene3D G3DSA:3.20.20.140 55 341 2.9E-142 T 14-10-2018 VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 PIRSF PIRSF038994 1 378 2.2E-121 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VEJY3_03770 aeb85e6bc39b98296f69c6e2ddf70bbb 378 SUPERFAMILY SSF51556 54 347 2.59E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_04405 6d8812bf9ac2ee7620bf48e4addcc11f 280 Gene3D G3DSA:1.10.3720.10 16 270 6.0E-48 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04405 6d8812bf9ac2ee7620bf48e4addcc11f 280 SUPERFAMILY SSF161098 11 266 6.35E-54 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04405 6d8812bf9ac2ee7620bf48e4addcc11f 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 270 3.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_14235 c479c7f2770c2a4d1c2ab62234e9e92c 198 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.135 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VEJY3_14235 c479c7f2770c2a4d1c2ab62234e9e92c 198 SUPERFAMILY SSF52218 10 182 5.07E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_14235 c479c7f2770c2a4d1c2ab62234e9e92c 198 Pfam PF02525 Flavodoxin-like fold 10 175 1.0E-40 T 14-10-2018 IPR003680 Flavodoxin-like fold VEJY3_14235 c479c7f2770c2a4d1c2ab62234e9e92c 198 Gene3D G3DSA:3.40.50.360 10 183 6.4E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_11925 09454dfbe60f8432368772ec24a7b8d7 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.788 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VEJY3_11925 09454dfbe60f8432368772ec24a7b8d7 191 Pfam PF13580 SIS domain 12 146 4.4E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_11925 09454dfbe60f8432368772ec24a7b8d7 191 Gene3D G3DSA:3.40.50.10490 1 191 2.9E-71 T 14-10-2018 VEJY3_11925 09454dfbe60f8432368772ec24a7b8d7 191 SUPERFAMILY SSF53697 1 189 8.7E-52 T 14-10-2018 VEJY3_02830 94322bfb2a959c0ec39678ed41e3dc65 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 6.8E-35 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VEJY3_02830 94322bfb2a959c0ec39678ed41e3dc65 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VEJY3_17486 6b745637e0343148ade6f1d6dc9c9266 204 PIRSF PIRSF006324 1 203 8.2E-42 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_17486 6b745637e0343148ade6f1d6dc9c9266 204 Pfam PF01810 LysE type translocator 15 202 1.4E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_10030 9e6b7916d1a1388c55bfacd0c827a378 239 SUPERFAMILY SSF53098 48 227 1.84E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_10030 9e6b7916d1a1388c55bfacd0c827a378 239 Gene3D G3DSA:3.30.420.10 44 231 4.3E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_10030 9e6b7916d1a1388c55bfacd0c827a378 239 SMART SM00479 48 229 5.0E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_10030 9e6b7916d1a1388c55bfacd0c827a378 239 Pfam PF00929 Exonuclease 50 220 1.4E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_10930 6fa5eca89b8f1fdf2d65e66b600865d4 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.065 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VEJY3_10930 6fa5eca89b8f1fdf2d65e66b600865d4 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 7.9E-104 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEJY3_11725 4be98962f31b653adac6af3564f18edb 730 SUPERFAMILY SSF56349 350 540 1.0E-8 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_11725 4be98962f31b653adac6af3564f18edb 730 Pfam PF00589 Phage integrase family 350 538 4.2E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_11725 4be98962f31b653adac6af3564f18edb 730 Gene3D G3DSA:1.10.443.10 332 539 1.4E-8 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_04450 ba149f0c0d473db472169733ed90a1d0 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_04450 ba149f0c0d473db472169733ed90a1d0 252 Pfam PF01048 Phosphorylase superfamily 20 244 1.8E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEJY3_04450 ba149f0c0d473db472169733ed90a1d0 252 Gene3D G3DSA:3.40.50.1580 1 252 5.0E-81 T 14-10-2018 VEJY3_04450 ba149f0c0d473db472169733ed90a1d0 252 SUPERFAMILY SSF53167 6 249 6.02E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEJY3_04450 ba149f0c0d473db472169733ed90a1d0 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.7E-109 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VEJY3_19971 bd6780c1764e7770d3249489c4cd5c0f 262 Pfam PF01435 Peptidase family M48 61 246 8.2E-45 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEJY3_19971 bd6780c1764e7770d3249489c4cd5c0f 262 Gene3D G3DSA:3.30.2010.10 54 139 2.2E-6 T 14-10-2018 VEJY3_03710 9bac23adfe31c3dc967e6e0a0b3b252a 92 Gene3D G3DSA:3.40.30.10 2 92 1.7E-39 T 14-10-2018 VEJY3_03710 9bac23adfe31c3dc967e6e0a0b3b252a 92 Pfam PF10262 Rdx family 6 78 2.0E-31 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VEJY3_03710 9bac23adfe31c3dc967e6e0a0b3b252a 92 SUPERFAMILY SSF52833 4 87 2.08E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_09865 e949f8416bc787670283a4909da380eb 266 SUPERFAMILY SSF51306 130 262 1.48E-18 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VEJY3_09865 e949f8416bc787670283a4909da380eb 266 Gene3D G3DSA:2.10.109.10 139 263 1.6E-5 T 14-10-2018 VEJY3_09865 e949f8416bc787670283a4909da380eb 266 Gene3D G3DSA:1.10.260.40 22 93 1.8E-8 T 14-10-2018 VEJY3_09865 e949f8416bc787670283a4909da380eb 266 SUPERFAMILY SSF47413 48 91 5.07E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09865 e949f8416bc787670283a4909da380eb 266 Pfam PF00717 Peptidase S24-like 180 243 3.4E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VEJY3_09865 e949f8416bc787670283a4909da380eb 266 Pfam PF01381 Helix-turn-helix 48 88 2.1E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20701 362d294927510d8c92a7dd0c6521145b 208 Pfam PF01810 LysE type translocator 21 207 2.8E-27 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_16876 ff0a8bf7c113fabb6a9f4d45a86ad6a0 359 Pfam PF13343 Bacterial extracellular solute-binding protein 96 336 5.8E-34 T 14-10-2018 VEJY3_16876 ff0a8bf7c113fabb6a9f4d45a86ad6a0 359 SUPERFAMILY SSF53850 52 352 1.75E-46 T 14-10-2018 VEJY3_16876 ff0a8bf7c113fabb6a9f4d45a86ad6a0 359 Gene3D G3DSA:3.40.190.10 71 319 1.4E-36 T 14-10-2018 VEJY3_16876 ff0a8bf7c113fabb6a9f4d45a86ad6a0 359 Gene3D G3DSA:3.40.190.10 145 265 1.4E-36 T 14-10-2018 VEJY3_11170 96ae1998e0d986d6dc98e467aee4cd0c 315 Gene3D G3DSA:1.10.8.760 155 219 7.4E-27 T 14-10-2018 VEJY3_11170 96ae1998e0d986d6dc98e467aee4cd0c 315 PIRSF PIRSF020419 2 299 1.4E-72 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VEJY3_11170 96ae1998e0d986d6dc98e467aee4cd0c 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 254 2.3E-58 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VEJY3_11170 96ae1998e0d986d6dc98e467aee4cd0c 315 Gene3D G3DSA:3.40.50.11550 43 268 7.4E-27 T 14-10-2018 VEJY3_11170 96ae1998e0d986d6dc98e467aee4cd0c 315 SUPERFAMILY SSF159501 32 283 4.34E-73 T 14-10-2018 VEJY3_10195 79f44e8b28bbff102a7f02dd7dfd0d3c 185 PIRSF PIRSF000847 1 184 4.0E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VEJY3_10195 79f44e8b28bbff102a7f02dd7dfd0d3c 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEJY3_10195 79f44e8b28bbff102a7f02dd7dfd0d3c 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.8E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEJY3_10195 79f44e8b28bbff102a7f02dd7dfd0d3c 185 Gene3D G3DSA:1.20.120.1760 2 180 1.3E-17 T 14-10-2018 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 SUPERFAMILY SSF47384 266 330 1.2E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 SUPERFAMILY SSF55874 340 479 1.01E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 SMART SM00304 229 281 1.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 479 2.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 Gene3D G3DSA:3.30.565.10 342 480 7.5E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 Pfam PF00672 HAMP domain 230 278 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 SMART SM00387 379 480 1.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 Gene3D G3DSA:1.10.287.130 233 341 1.9E-16 T 14-10-2018 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 441 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 325 2.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_04140 bd0093cba7b99c435eac9414f0212ade 480 SMART SM00388 282 340 0.0028 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEJY3_15250 389f5942dc37c15acc493bbde709d6c8 646 Gene3D G3DSA:3.20.20.540 214 527 1.8E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEJY3_15250 389f5942dc37c15acc493bbde709d6c8 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.425 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEJY3_15250 389f5942dc37c15acc493bbde709d6c8 646 Pfam PF01964 Radical SAM ThiC family 144 592 6.7E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEJY3_15250 389f5942dc37c15acc493bbde709d6c8 646 Pfam PF13667 ThiC-associated domain 22 104 5.5E-34 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEJY3_16691 981e5d12757ec1abfb2d1c81015cc10d 202 PIRSF PIRSF006324 1 202 6.9E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_16691 981e5d12757ec1abfb2d1c81015cc10d 202 Pfam PF01810 LysE type translocator 13 201 2.5E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_06365 e5179ef797303b853cebc0d5cab02f0a 342 PIRSF PIRSF017020 4 336 1.9E-122 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VEJY3_06365 e5179ef797303b853cebc0d5cab02f0a 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 1.2E-65 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_06365 e5179ef797303b853cebc0d5cab02f0a 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 130.638 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VEJY3_06365 e5179ef797303b853cebc0d5cab02f0a 342 SUPERFAMILY SSF53187 9 329 2.74E-74 T 14-10-2018 VEJY3_06365 e5179ef797303b853cebc0d5cab02f0a 342 Gene3D G3DSA:3.40.630.10 1 342 1.5E-117 T 14-10-2018 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Pfam PF01568 Molydopterin dinucleotide binding domain 593 704 1.7E-29 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Gene3D G3DSA:3.40.228.10 142 576 7.3E-169 T 14-10-2018 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 SUPERFAMILY SSF53706 5 578 1.15E-179 T 14-10-2018 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 8 26 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 SUPERFAMILY SSF50692 583 717 2.49E-38 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Gene3D G3DSA:2.20.25.90 1 57 6.8E-15 T 14-10-2018 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Gene3D G3DSA:3.40.50.740 73 573 7.3E-169 T 14-10-2018 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 SMART SM00926 3 58 1.0E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Pfam PF00384 Molybdopterin oxidoreductase 60 484 8.5E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 55 7.5E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEJY3_18691 8cd983ac66c915d1e27f913b6026991f 829 Gene3D G3DSA:2.40.40.20 580 717 1.1E-35 T 14-10-2018 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 SUPERFAMILY SSF46785 3 64 2.05E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 3.9E-16 T 14-10-2018 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 SMART SM00344 5 114 2.8E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 Gene3D G3DSA:3.30.70.920 57 151 4.0E-26 T 14-10-2018 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.3E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 SUPERFAMILY SSF54909 65 150 1.88E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 Gene3D G3DSA:1.10.10.10 1 56 3.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_24271 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 SMART SM00895 99 227 7.1E-20 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 Gene3D G3DSA:1.20.120.530 97 236 4.1E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 Gene3D G3DSA:1.10.10.10 1 74 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 SMART SM00345 15 74 1.8E-27 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 SUPERFAMILY SSF46785 5 76 4.49E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.9E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 Pfam PF07729 FCD domain 99 226 1.9E-19 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_13010 ac35b9e76eb1d0d487aa489b3a719b88 255 SUPERFAMILY SSF48008 97 235 8.63E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 ProSitePatterns PS00769 Transthyretin signature 2. 90 102 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 Gene3D G3DSA:2.60.40.180 1 107 2.0E-31 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 Pfam PF00576 HIUase/Transthyretin family 4 106 1.8E-30 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 PRINTS PR00189 Transthyretin signature 3 23 3.2E-7 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 PRINTS PR00189 Transthyretin signature 85 107 3.2E-7 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_17066 8f88762cd2e9ca5af395ad4ddcff4dd3 107 SUPERFAMILY SSF49472 1 107 1.27E-31 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 VEJY3_06170 11fb1c2c70b8c3a8a1d4e2a31ed142aa 247 Pfam PF07070 SpoOM protein 2 215 7.8E-61 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VEJY3_15070 36873eb373d761b88549cfdf04263fda 841 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.4E-253 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VEJY3_15070 36873eb373d761b88549cfdf04263fda 841 PIRSF PIRSF001444 1 841 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VEJY3_15070 36873eb373d761b88549cfdf04263fda 841 Pfam PF12633 Adenylate cyclase NT domain 5 198 5.6E-78 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VEJY3_10095 d4a7a979b17cd4058445316d55407380 513 Pfam PF01471 Putative peptidoglycan binding domain 212 260 3.2E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like VEJY3_10095 d4a7a979b17cd4058445316d55407380 513 SUPERFAMILY SSF141523 287 448 3.4E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEJY3_10095 d4a7a979b17cd4058445316d55407380 513 SUPERFAMILY SSF47090 191 269 4.79E-13 T 14-10-2018 IPR036365 PGBD-like superfamily VEJY3_10095 d4a7a979b17cd4058445316d55407380 513 Pfam PF03734 L,D-transpeptidase catalytic domain 288 454 2.8E-29 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 Gene3D G3DSA:3.30.450.20 104 172 3.4E-8 T 14-10-2018 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 SMART SM00283 363 624 4.3E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 SUPERFAMILY SSF103190 57 170 5.02E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEJY3_18356 cfba69a7f8977212048085022e12275d 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 589 2.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 Gene3D G3DSA:1.10.287.950 304 625 1.7E-63 T 14-10-2018 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 SUPERFAMILY SSF58104 339 625 3.23E-65 T 14-10-2018 VEJY3_18356 cfba69a7f8977212048085022e12275d 625 Gene3D G3DSA:3.30.450.20 173 265 3.4E-8 T 14-10-2018 VEJY3_22916 367d4058c4728972b91fca13dc7a5ce5 352 Pfam PF01145 SPFH domain / Band 7 family 64 257 3.2E-25 T 14-10-2018 IPR001107 Band 7 domain VEJY3_22916 367d4058c4728972b91fca13dc7a5ce5 352 Gene3D G3DSA:3.30.479.30 127 232 6.0E-19 T 14-10-2018 VEJY3_22916 367d4058c4728972b91fca13dc7a5ce5 352 SMART SM00244 60 242 6.8E-25 T 14-10-2018 IPR001107 Band 7 domain VEJY3_22916 367d4058c4728972b91fca13dc7a5ce5 352 SUPERFAMILY SSF117892 133 249 4.71E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_12260 34a16a1b9c0611623356ff2e9e30f555 450 SUPERFAMILY SSF103473 10 436 2.62E-35 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_12260 34a16a1b9c0611623356ff2e9e30f555 450 Gene3D G3DSA:1.20.1250.20 248 440 5.7E-8 T 14-10-2018 VEJY3_12260 34a16a1b9c0611623356ff2e9e30f555 450 Pfam PF07690 Major Facilitator Superfamily 24 397 2.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_12260 34a16a1b9c0611623356ff2e9e30f555 450 Gene3D G3DSA:1.20.1250.20 11 222 2.4E-12 T 14-10-2018 VEJY3_20726 7e416255efd4d4ab3f9bd3164607a2cf 486 PIRSF PIRSF006247 1 486 2.1E-144 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEJY3_20726 7e416255efd4d4ab3f9bd3164607a2cf 486 Pfam PF02386 Cation transport protein 58 476 1.1E-57 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Gene3D G3DSA:3.40.50.300 25 186 9.8E-41 T 14-10-2018 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 SUPERFAMILY SSF52540 25 256 8.04E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 SUPERFAMILY SSF46785 262 332 1.9E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.739 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Gene3D G3DSA:1.10.8.60 187 260 1.1E-30 T 14-10-2018 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 1.2E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VEJY3_04890 05edeaaafcbd92985bab468e2de4fef8 334 SMART SM00382 56 189 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21316 251ab2268bfe90a04be0d507af7f1287 406 Gene3D G3DSA:3.30.70.270 247 406 3.7E-48 T 14-10-2018 VEJY3_21316 251ab2268bfe90a04be0d507af7f1287 406 SUPERFAMILY SSF55073 254 404 6.28E-41 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_21316 251ab2268bfe90a04be0d507af7f1287 406 SMART SM00267 235 406 7.5E-45 T 14-10-2018 IPR000160 GGDEF domain VEJY3_21316 251ab2268bfe90a04be0d507af7f1287 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 401 2.9E-39 T 14-10-2018 IPR000160 GGDEF domain VEJY3_00010 2659e3415833f7d0e13cdf95e63f444b 144 SUPERFAMILY SSF52218 2 142 3.56E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_00010 2659e3415833f7d0e13cdf95e63f444b 144 Gene3D G3DSA:3.40.50.360 1 144 2.6E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_00010 2659e3415833f7d0e13cdf95e63f444b 144 Pfam PF00258 Flavodoxin 4 136 6.7E-22 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 PIRSF PIRSF000478 1 438 2.7E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 SUPERFAMILY SSF47648 2 70 9.16E-22 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Gene3D G3DSA:3.40.1030.10 70 322 1.8E-127 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 SUPERFAMILY SSF54680 337 437 6.02E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.0E-21 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.598 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 9.9E-24 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 SUPERFAMILY SSF52418 73 334 1.13E-88 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Gene3D G3DSA:1.20.970.10 7 195 1.8E-127 T 14-10-2018 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.9E-48 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 Gene3D G3DSA:3.90.1170.30 337 432 1.2E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_12595 7a21b5af52635146927365d2b5338aa9 442 SMART SM00941 350 424 1.4E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 SUPERFAMILY SSF52283 2 174 1.28E-51 T 14-10-2018 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 SMART SM01003 4 143 1.0E-68 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 SUPERFAMILY SSF51735 143 319 1.4E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 SMART SM01002 152 317 4.0E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 Gene3D G3DSA:3.40.50.720 3 371 1.9E-156 T 14-10-2018 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.1E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 Gene3D G3DSA:3.40.50.720 143 324 1.9E-156 T 14-10-2018 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 PIRSF PIRSF000203 1 516 5.8E-269 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.0E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEJY3_19776 bd42161a7ae032894df136397abd8ad2 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 1.1E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEJY3_19766 62039af6e231102d81d704b7541d0102 118 Pfam PF10719 Late competence development protein ComFB 8 85 4.9E-15 T 14-10-2018 IPR019657 Late competence development protein ComFB VEJY3_23201 c51032cfed2a6a2476ff177a6f2ead93 438 Gene3D G3DSA:3.30.9.10 125 353 8.7E-45 T 14-10-2018 VEJY3_23201 c51032cfed2a6a2476ff177a6f2ead93 438 SUPERFAMILY SSF51905 32 398 1.21E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23201 c51032cfed2a6a2476ff177a6f2ead93 438 Gene3D G3DSA:3.50.50.60 33 391 8.7E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23201 c51032cfed2a6a2476ff177a6f2ead93 438 Pfam PF01266 FAD dependent oxidoreductase 33 390 1.1E-35 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_11945 8b176d9beef2fa95bf69f0d0c386bac3 240 SMART SM00479 11 189 6.4E-50 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_11945 8b176d9beef2fa95bf69f0d0c386bac3 240 Gene3D G3DSA:3.30.420.10 4 194 9.0E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_11945 8b176d9beef2fa95bf69f0d0c386bac3 240 Pfam PF00929 Exonuclease 13 180 1.5E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_11945 8b176d9beef2fa95bf69f0d0c386bac3 240 SUPERFAMILY SSF53098 11 190 1.57E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 SUPERFAMILY SSF51735 3 167 5.02E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 SUPERFAMILY SSF48179 168 298 2.15E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 3.5E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 PIRSF PIRSF000103 1 300 1.7E-75 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 Gene3D G3DSA:3.40.50.720 1 167 2.2E-51 T 14-10-2018 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 Gene3D G3DSA:1.10.1040.10 169 300 5.4E-43 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_20591 588dc8d3a77c53d7fb587b13cd2dd924 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 5.8E-48 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 SUPERFAMILY SSF51182 6 390 8.67E-96 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 Gene3D G3DSA:2.60.120.10 317 397 5.6E-123 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 38 53 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 86 107 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 10 28 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 3.1E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 Pfam PF01238 Phosphomannose isomerase type I 7 367 1.0E-77 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 Gene3D G3DSA:1.10.441.10 155 316 5.6E-123 T 14-10-2018 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 PIRSF PIRSF001480 4 405 3.6E-102 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEJY3_01165 419822e24b4e4fca41f5eeb8ab960d18 405 Gene3D G3DSA:2.60.120.10 12 291 5.6E-123 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_10870 cc63bb10df7b9d1f8c5a6bb3fe44f107 151 Gene3D G3DSA:3.90.1170.40 1 149 1.1E-53 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEJY3_10870 cc63bb10df7b9d1f8c5a6bb3fe44f107 151 SUPERFAMILY SSF54690 4 149 7.85E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEJY3_10870 cc63bb10df7b9d1f8c5a6bb3fe44f107 151 Pfam PF02391 MoaE protein 7 119 1.5E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 Pfam PF00731 AIR carboxylase 2 150 8.3E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 PIRSF PIRSF001338 1 160 1.4E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 SMART SM01001 1 152 8.6E-104 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 Gene3D G3DSA:3.40.50.7700 1 161 2.9E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VEJY3_15290 8cd12974b62ce677a69cb68a926a7cca 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.52 T 14-10-2018 IPR033747 Class I PurE VEJY3_08845 dd7fdd972d4c9d4969401783fc2af3b1 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 2.4E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 SUPERFAMILY SSF52540 304 553 7.83E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 SUPERFAMILY SSF52540 3 253 7.48E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 7.5E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.2E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Pfam PF00005 ABC transporter 330 483 1.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Gene3D G3DSA:3.40.50.300 1 294 3.6E-87 T 14-10-2018 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Gene3D G3DSA:3.40.50.300 301 571 6.7E-86 T 14-10-2018 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 SMART SM00382 338 534 2.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 SMART SM00382 32 231 2.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00210 13b58682c90a5083fefc4bef680f0941 571 Pfam PF00005 ABC transporter 24 181 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 Gene3D G3DSA:2.40.100.10 91 226 1.5E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 SUPERFAMILY SSF50891 93 220 6.45E-35 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 1.1E-54 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 SUPERFAMILY SSF160467 8 97 2.09E-10 T 14-10-2018 VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 Gene3D G3DSA:3.30.1360.40 6 81 1.2E-9 T 14-10-2018 VEJY3_19886 558d31b4913386da6ed64b29d2dc892a 227 SMART SM00796 6 203 3.0E-64 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 PIRSF PIRSF006004 3 366 1.0E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 SUPERFAMILY SSF102114 103 312 3.66E-13 T 14-10-2018 VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 Pfam PF04055 Radical SAM superfamily 109 283 1.7E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.933 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 Gene3D G3DSA:3.20.20.70 68 338 3.4E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02770 342d06137965ab01ce1c73fa635999d8 375 Gene3D G3DSA:1.10.150.530 1 67 3.5E-26 T 14-10-2018 VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 223 1.3E-33 T 14-10-2018 VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 207 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 110 126 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 173 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 76 8.8E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 SUPERFAMILY SSF51735 3 224 7.84E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22186 3fcd108ff6d9ab470667a24dd9a461a2 225 Gene3D G3DSA:3.40.50.720 2 225 7.5E-51 T 14-10-2018 VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.0E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.827 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 Gene3D G3DSA:1.20.120.910 17 147 2.9E-36 T 14-10-2018 VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 SUPERFAMILY SSF109635 8 107 4.58E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VEJY3_12935 f8e35ebe093a1017f4b7a3f16ac34c12 148 SUPERFAMILY SSF57716 108 146 5.84E-10 T 14-10-2018 VEJY3_19691 2d202a3a44db2d64e76894d5ee99d072 290 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 1.5E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEJY3_19691 2d202a3a44db2d64e76894d5ee99d072 290 Gene3D G3DSA:3.60.10.10 15 285 5.8E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_19691 2d202a3a44db2d64e76894d5ee99d072 290 SUPERFAMILY SSF56219 16 288 2.09E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEJY3_16826 070e9651a1ff1d50e1ed86a63b336b6d 156 SUPERFAMILY SSF88697 7 155 7.46E-52 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_16826 070e9651a1ff1d50e1ed86a63b336b6d 156 SMART SM01022 30 153 4.1E-35 T 14-10-2018 IPR007374 ASCH domain VEJY3_16826 070e9651a1ff1d50e1ed86a63b336b6d 156 PIRSF PIRSF021320 2 156 2.9E-47 T 14-10-2018 IPR009326 Protein of unknown function DUF984 VEJY3_16826 070e9651a1ff1d50e1ed86a63b336b6d 156 Gene3D G3DSA:3.10.400.10 1 153 1.8E-57 T 14-10-2018 VEJY3_16826 070e9651a1ff1d50e1ed86a63b336b6d 156 Pfam PF04266 ASCH domain 42 153 6.0E-22 T 14-10-2018 IPR007374 ASCH domain VEJY3_16286 96967a2e148074a9e50b5d30db0e024e 255 Pfam PF11932 Protein of unknown function (DUF3450) 9 248 1.3E-86 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEJY3_16286 96967a2e148074a9e50b5d30db0e024e 255 PIRSF PIRSF028069 1 255 4.1E-110 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEJY3_21281 8f231f0b3cc3f987390857ec09018d37 357 Gene3D G3DSA:3.30.750.24 3 89 7.6E-10 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_21281 8f231f0b3cc3f987390857ec09018d37 357 Pfam PF13466 STAS domain 8 83 5.2E-11 T 14-10-2018 IPR002645 STAS domain VEJY3_21281 8f231f0b3cc3f987390857ec09018d37 357 SUPERFAMILY SSF52091 5 82 5.49E-12 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_21281 8f231f0b3cc3f987390857ec09018d37 357 Pfam PF02405 Permease MlaE 151 355 3.4E-67 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VEJY3_21281 8f231f0b3cc3f987390857ec09018d37 357 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 137 356 1.7E-64 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 SUPERFAMILY SSF53633 14 265 7.59E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.501 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 5.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 5.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 5.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 5.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 5.6E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 Gene3D G3DSA:2.30.130.10 275 377 2.9E-32 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 Pfam PF01472 PUA domain 286 360 7.3E-25 T 14-10-2018 IPR002478 PUA domain GO:0003723 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 PIRSF PIRSF000729 9 378 2.0E-137 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 SUPERFAMILY SSF88697 286 376 1.82E-25 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 Gene3D G3DSA:3.40.1160.10 5 274 2.7E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 5.0E-148 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 Pfam PF00696 Amino acid kinase family 14 243 1.6E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_03110 3812b4fd88294e24b81b62082261fbe5 379 SMART SM00359 286 369 1.2E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 2.8E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 SUPERFAMILY SSF63848 113 218 1.7E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 2.3E-31 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.557 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 Gene3D G3DSA:3.30.750.120 2 113 1.5E-34 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VEJY3_03985 56b6a05f41439f447fe725777fb666a0 220 Gene3D G3DSA:2.160.20.70 114 220 2.3E-31 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VEJY3_23161 dd2309a1e073eb70a903c0147c447eee 108 SUPERFAMILY SSF88697 5 105 1.69E-32 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_23161 dd2309a1e073eb70a903c0147c447eee 108 Pfam PF04266 ASCH domain 9 105 7.8E-15 T 14-10-2018 IPR007374 ASCH domain VEJY3_23161 dd2309a1e073eb70a903c0147c447eee 108 SMART SM01022 8 106 3.5E-25 T 14-10-2018 IPR007374 ASCH domain VEJY3_23161 dd2309a1e073eb70a903c0147c447eee 108 PIRSF PIRSF029143 3 107 3.6E-46 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VEJY3_23161 dd2309a1e073eb70a903c0147c447eee 108 Gene3D G3DSA:2.30.130.30 3 105 2.2E-43 T 14-10-2018 VEJY3_13155 d248f1d894133c201a2c2bc41051586d 155 Gene3D G3DSA:1.10.10.10 11 50 1.4E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13155 d248f1d894133c201a2c2bc41051586d 155 Gene3D G3DSA:1.10.10.10 104 150 3.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13155 d248f1d894133c201a2c2bc41051586d 155 Pfam PF02631 RecX family 34 150 4.3E-29 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VEJY3_13155 d248f1d894133c201a2c2bc41051586d 155 Gene3D G3DSA:1.10.10.10 58 101 9.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13155 d248f1d894133c201a2c2bc41051586d 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.422 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VEJY3_22976 5b0261d306c479be8dac3c3171fb027f 211 Pfam PF08722 TnsA endonuclease N terminal 45 120 1.6E-9 T 14-10-2018 IPR014833 TnsA endonuclease, N-terminal VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 Gene3D G3DSA:3.30.70.1560 122 221 1.2E-39 T 14-10-2018 VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 Gene3D G3DSA:3.30.70.580 45 121 2.0E-26 T 14-10-2018 VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 93 107 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 Pfam PF00849 RNA pseudouridylate synthase 58 202 1.4E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 SUPERFAMILY SSF55120 48 232 1.31E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEJY3_04695 85f8a68d422a625ce3cdc18b6b94b2c2 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 62 232 5.7E-58 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEJY3_23616 aa511d89c28178b3e450e0536fff23d2 382 Pfam PF01594 AI-2E family transporter 24 346 9.6E-34 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 Gene3D G3DSA:3.40.640.10 69 317 7.5E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 SUPERFAMILY SSF53383 2 424 5.62E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.538 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 Pfam PF00202 Aminotransferase class-III 33 396 8.2E-76 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEJY3_12790 88b928df0478dde1b48a3c049a1f90aa 431 Gene3D G3DSA:3.90.1150.10 7 419 7.5E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 Gene3D G3DSA:3.30.300.20 17 107 2.6E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.434 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 SMART SM00322 60 125 7.7E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 Pfam PF07650 KH domain 38 111 4.0E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 SUPERFAMILY SSF54814 2 106 4.97E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01310 c174c506d0f969f87d584c5514d90348 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_10505 669580f9c9cc2313ade9d54e7a06da27 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 186 2.3E-36 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component VEJY3_10505 669580f9c9cc2313ade9d54e7a06da27 189 SUPERFAMILY SSF159594 25 188 1.52E-27 T 14-10-2018 VEJY3_10505 669580f9c9cc2313ade9d54e7a06da27 189 Gene3D G3DSA:3.40.50.10610 16 189 5.6E-10 T 14-10-2018 VEJY3_17131 61d736de0cf9408cd75ca0527759d99e 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 3.8E-154 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEJY3_17131 61d736de0cf9408cd75ca0527759d99e 433 PIRSF PIRSF015658 1 432 6.9E-171 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 Pfam PF02556 Preprotein translocase subunit SecB 7 146 2.7E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 Gene3D G3DSA:3.10.420.10 3 155 4.7E-58 T 14-10-2018 IPR035958 SecB-like superfamily VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 SUPERFAMILY SSF54611 4 143 7.63E-52 T 14-10-2018 IPR035958 SecB-like superfamily VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_14420 20d85d2b92aa1c5ddee3765d6cbe5ddc 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.113 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEJY3_23796 655655ec0f05c16ecaeedc6bc7767d88 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 4.9E-50 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_23796 655655ec0f05c16ecaeedc6bc7767d88 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_23796 655655ec0f05c16ecaeedc6bc7767d88 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 6.5E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_23796 655655ec0f05c16ecaeedc6bc7767d88 479 Gene3D G3DSA:3.30.1360.60 1 78 9.8E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_23796 655655ec0f05c16ecaeedc6bc7767d88 479 SUPERFAMILY SSF55604 6 82 1.7E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.442 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 Gene3D G3DSA:3.40.50.300 103 276 1.9E-49 T 14-10-2018 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 Gene3D G3DSA:2.40.50.140 36 102 1.5E-21 T 14-10-2018 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 Pfam PF03193 RsgA GTPase 100 277 1.8E-57 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 Gene3D G3DSA:1.10.40.50 277 351 9.0E-25 T 14-10-2018 VEJY3_14390 29e62961693db2dc899de485be6a00b1 354 SUPERFAMILY SSF52540 114 337 1.64E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21926 f724d6d671f00001aa0579a973bb43f2 302 Gene3D G3DSA:1.10.357.140 22 181 2.8E-22 T 14-10-2018 VEJY3_21926 f724d6d671f00001aa0579a973bb43f2 302 Pfam PF01040 UbiA prenyltransferase family 32 277 7.9E-65 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEJY3_21926 f724d6d671f00001aa0579a973bb43f2 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site VEJY3_21926 f724d6d671f00001aa0579a973bb43f2 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 4.6E-100 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEJY3_21926 f724d6d671f00001aa0579a973bb43f2 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.35 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEJY3_03775 cec7271235423e2e690a04d519f21702 523 SUPERFAMILY SSF55604 438 510 1.18E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_03775 cec7271235423e2e690a04d519f21702 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_03775 cec7271235423e2e690a04d519f21702 523 Gene3D G3DSA:3.30.1360.60 434 514 1.6E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_03775 cec7271235423e2e690a04d519f21702 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 2.0E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_03775 cec7271235423e2e690a04d519f21702 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-65 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_01060 f5b5905890c46b9d504e4652e1ead94e 258 Pfam PF00535 Glycosyl transferase family 2 15 138 2.1E-38 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_01060 f5b5905890c46b9d504e4652e1ead94e 258 Gene3D G3DSA:3.90.550.10 2 233 1.4E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01060 f5b5905890c46b9d504e4652e1ead94e 258 SUPERFAMILY SSF53448 13 223 2.68E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_11710 05d03cb54b89d84d7dc7969e0db871e4 284 Pfam PF00589 Phage integrase family 150 242 7.4E-6 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_11710 05d03cb54b89d84d7dc7969e0db871e4 284 SUPERFAMILY SSF56349 141 241 9.71E-10 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_11710 05d03cb54b89d84d7dc7969e0db871e4 284 Gene3D G3DSA:1.10.443.10 134 273 4.6E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 SUPERFAMILY SSF53474 3 268 9.67E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 8.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 8.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 8.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 8.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 Pfam PF00561 alpha/beta hydrolase fold 23 253 5.6E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 Gene3D G3DSA:3.40.50.1820 1 271 9.7E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_01840 93d010d9d55a551dbd3fd18ff33735d3 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_08350 629be3cb02a7a823b378988adb6cc3fd 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 1.2E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_08350 629be3cb02a7a823b378988adb6cc3fd 120 Gene3D G3DSA:3.10.180.10 1 119 1.8E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_08350 629be3cb02a7a823b378988adb6cc3fd 120 SUPERFAMILY SSF54593 2 119 2.46E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 Gene3D G3DSA:1.20.120.1380 268 477 6.3E-58 T 14-10-2018 VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 SUPERFAMILY SSF52540 289 480 1.05E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 SMART SM00962 293 486 1.2E-65 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 Gene3D G3DSA:3.40.50.300 288 474 6.3E-58 T 14-10-2018 VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 SMART SM00382 292 445 7.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11505 ad7e2afed5deb8b5e1aeddbdc974bf78 506 Pfam PF00448 SRP54-type protein, GTPase domain 295 482 1.7E-38 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEJY3_12720 1c881db8e40d8d6a5c454e215261b3e8 277 Gene3D G3DSA:3.20.20.20 1 276 2.7E-109 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_12720 1c881db8e40d8d6a5c454e215261b3e8 277 SUPERFAMILY SSF51717 5 275 6.67E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_12720 1c881db8e40d8d6a5c454e215261b3e8 277 Pfam PF00809 Pterin binding enzyme 18 258 2.6E-88 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_12720 1c881db8e40d8d6a5c454e215261b3e8 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_12720 1c881db8e40d8d6a5c454e215261b3e8 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 Pfam PF00119 ATP synthase A chain 7 196 2.0E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 203 13.814 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 Gene3D G3DSA:1.20.120.220 55 202 1.9E-30 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 SUPERFAMILY SSF81336 56 196 4.32E-32 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 ProSitePatterns PS00449 ATP synthase a subunit signature. 142 151 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 PRINTS PR00123 ATP synthase A subunit signature 123 138 4.7E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 PRINTS PR00123 ATP synthase A subunit signature 139 161 4.7E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 PRINTS PR00123 ATP synthase A subunit signature 183 198 4.7E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21636 feefcaeb902710f6b71b8f241fdc68bc 213 PRINTS PR00123 ATP synthase A subunit signature 63 79 4.7E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_02020 545bc2729575d3011231ddfa1e7d7b73 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 1.8E-27 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VEJY3_02020 545bc2729575d3011231ddfa1e7d7b73 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.818 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VEJY3_02020 545bc2729575d3011231ddfa1e7d7b73 122 Gene3D G3DSA:3.40.1350.10 13 122 4.9E-31 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEJY3_02020 545bc2729575d3011231ddfa1e7d7b73 122 SUPERFAMILY SSF52980 7 112 5.82E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 SUPERFAMILY SSF69336 1236 1498 1.27E-95 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.7E-150 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Gene3D G3DSA:2.160.20.60 1239 1510 4.4E-110 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 SUPERFAMILY SSF51395 451 1221 3.91E-268 T 14-10-2018 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Pfam PF01493 GXGXG motif 1267 1452 4.0E-84 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 SUPERFAMILY SSF56235 21 446 2.74E-152 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Pfam PF00310 Glutamine amidotransferases class-II 21 443 5.9E-185 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Pfam PF04898 Glutamate synthase central domain 472 756 3.8E-117 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02190 7dabe87874a4f013970d8fc3a294fd5a 1512 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_07300 92f0635d914fd9a99f6f43d1e602d0b0 286 SUPERFAMILY SSF161098 10 275 1.06E-54 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07300 92f0635d914fd9a99f6f43d1e602d0b0 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 8.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_07300 92f0635d914fd9a99f6f43d1e602d0b0 286 Gene3D G3DSA:1.10.3720.10 7 278 9.0E-54 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_02905 38452ef02dccd748b044c6199dd79e1d 266 Gene3D G3DSA:3.40.225.10 8 257 8.6E-77 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_02905 38452ef02dccd748b044c6199dd79e1d 266 SUPERFAMILY SSF53639 6 262 2.16E-45 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_02905 38452ef02dccd748b044c6199dd79e1d 266 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 240 6.5E-26 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_02905 38452ef02dccd748b044c6199dd79e1d 266 SMART SM01007 13 240 9.1E-11 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 Gene3D G3DSA:1.10.1370.20 219 600 6.6E-110 T 14-10-2018 VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 Pfam PF01432 Peptidase family M3 335 580 4.2E-23 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 Gene3D G3DSA:1.20.140.70 17 168 8.4E-12 T 14-10-2018 VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 SUPERFAMILY SSF55486 5 582 3.66E-93 T 14-10-2018 VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 Pfam PF08439 Oligopeptidase F 106 174 2.2E-11 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VEJY3_06360 65ced2ceee935f79032751806c7e2979 601 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 5.6E-200 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VEJY3_02110 9b300a86544f1c49605f38db4d6c6315 150 Pfam PF05258 Protein of unknown function (DUF721) 11 85 2.9E-12 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VEJY3_00855 e54e4e0bc034da3c142b1a31721ff191 196 Gene3D G3DSA:1.10.357.10 3 196 5.7E-77 T 14-10-2018 VEJY3_00855 e54e4e0bc034da3c142b1a31721ff191 196 SUPERFAMILY SSF48498 81 191 1.63E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEJY3_00855 e54e4e0bc034da3c142b1a31721ff191 196 SUPERFAMILY SSF46689 5 78 1.5E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_00855 e54e4e0bc034da3c142b1a31721ff191 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.323 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VEJY3_00855 e54e4e0bc034da3c142b1a31721ff191 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEJY3_14940 2237d5a649b6afb2f5699edcf4b759a2 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_14940 2237d5a649b6afb2f5699edcf4b759a2 199 PIRSF PIRSF004553 18 198 4.1E-56 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VEJY3_14940 2237d5a649b6afb2f5699edcf4b759a2 199 Gene3D G3DSA:3.40.50.150 6 198 1.6E-64 T 14-10-2018 VEJY3_14940 2237d5a649b6afb2f5699edcf4b759a2 199 SUPERFAMILY SSF53335 19 196 3.07E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14940 2237d5a649b6afb2f5699edcf4b759a2 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 2.2E-62 T 14-10-2018 VEJY3_09070 904f3eeb1aa1b66ad46b62995c0b022a 301 SUPERFAMILY SSF51679 40 301 2.62E-45 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VEJY3_09070 904f3eeb1aa1b66ad46b62995c0b022a 301 Gene3D G3DSA:3.20.20.30 4 301 2.5E-67 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 VEJY3_09070 904f3eeb1aa1b66ad46b62995c0b022a 301 Pfam PF00296 Luciferase-like monooxygenase 26 224 2.8E-28 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 VEJY3_04660 831fd6b41402468120969512df869225 231 Pfam PF04172 LrgB-like family 16 227 2.7E-69 T 14-10-2018 IPR007300 CidB/LrgB family VEJY3_22766 fb2a9527b5158ab88b47c8aceb187d3d 361 SUPERFAMILY SSF56935 26 361 4.19E-46 T 14-10-2018 VEJY3_22766 fb2a9527b5158ab88b47c8aceb187d3d 361 Gene3D G3DSA:2.40.160.10 24 361 6.3E-58 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_12065 dbffcc3697425b42057839ea501d34a0 243 Gene3D G3DSA:3.40.1160.10 3 243 1.9E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_12065 dbffcc3697425b42057839ea501d34a0 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.084 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VEJY3_12065 dbffcc3697425b42057839ea501d34a0 243 Pfam PF00696 Amino acid kinase family 11 219 6.2E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_12065 dbffcc3697425b42057839ea501d34a0 243 PIRSF PIRSF005650 4 243 4.1E-89 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VEJY3_12065 dbffcc3697425b42057839ea501d34a0 243 SUPERFAMILY SSF53633 7 239 6.41E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_14650 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_14650 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 VEJY3_09415 c96fa4586c850859f10dcae723672ef1 156 Gene3D G3DSA:2.60.120.370 1 154 8.4E-34 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VEJY3_09415 c96fa4586c850859f10dcae723672ef1 156 Pfam PF04074 Domain of unknown function (DUF386) 1 151 2.8E-35 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VEJY3_09415 c96fa4586c850859f10dcae723672ef1 156 SUPERFAMILY SSF51197 1 153 1.21E-33 T 14-10-2018 VEJY3_00275 2bd3c9815bb71b0d84101b8788347014 680 Gene3D G3DSA:1.10.1370.40 13 675 6.8E-270 T 14-10-2018 VEJY3_00275 2bd3c9815bb71b0d84101b8788347014 680 SUPERFAMILY SSF55486 1 677 5.49E-213 T 14-10-2018 VEJY3_00275 2bd3c9815bb71b0d84101b8788347014 680 Gene3D G3DSA:1.10.1370.10 140 610 6.8E-270 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VEJY3_00275 2bd3c9815bb71b0d84101b8788347014 680 Pfam PF01432 Peptidase family M3 222 677 4.0E-164 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEJY3_19851 c14419d9e0e97936d8be183b551b1216 189 Pfam PF05036 Sporulation related domain 99 172 1.8E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_19851 c14419d9e0e97936d8be183b551b1216 189 SUPERFAMILY SSF110997 99 162 1.7E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_19851 c14419d9e0e97936d8be183b551b1216 189 Gene3D G3DSA:3.30.70.1070 89 180 7.0E-22 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 Pfam PF03150 Di-haem cytochrome c peroxidase 61 210 1.3E-34 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 SUPERFAMILY SSF46626 209 371 3.85E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 SUPERFAMILY SSF46626 47 203 5.42E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 Gene3D G3DSA:1.10.760.10 53 202 9.8E-75 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 Gene3D G3DSA:1.10.760.10 203 367 9.8E-75 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_04985 26aa89ceb280f30f2d96aa838d3300ab 387 PIRSF PIRSF000294 41 380 2.0E-60 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VEJY3_17341 9b3120bf369122a4f553d27c7883c59f 337 SUPERFAMILY SSF51556 4 322 1.24E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_17341 9b3120bf369122a4f553d27c7883c59f 337 Hamap MF_01962 Adenine deaminase. 4 316 86.198 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 VEJY3_17341 9b3120bf369122a4f553d27c7883c59f 337 Gene3D G3DSA:3.20.20.140 1 336 2.5E-107 T 14-10-2018 VEJY3_17341 9b3120bf369122a4f553d27c7883c59f 337 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.3E-74 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 SUPERFAMILY SSF56014 435 572 4.06E-33 T 14-10-2018 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 4.4E-5 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 SUPERFAMILY SSF56014 154 350 6.67E-59 T 14-10-2018 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Gene3D G3DSA:3.30.413.10 146 354 2.2E-82 T 14-10-2018 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.332 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 1.0E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 SUPERFAMILY SSF55124 18 150 2.78E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 SUPERFAMILY SSF55124 352 428 1.96E-19 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Gene3D G3DSA:3.30.413.10 432 575 1.8E-35 T 14-10-2018 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Gene3D G3DSA:3.90.480.20 21 413 2.2E-82 T 14-10-2018 VEJY3_13940 fee343de0d2979a6852523d8a38a0302 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 5.4E-46 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEJY3_16866 c9ffc33a9531709de1dbdd4c36afae7b 298 Gene3D G3DSA:1.10.3720.10 24 287 9.3E-33 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16866 c9ffc33a9531709de1dbdd4c36afae7b 298 SUPERFAMILY SSF161098 26 294 6.07E-40 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16866 c9ffc33a9531709de1dbdd4c36afae7b 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 285 2.3E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 Gene3D G3DSA:3.30.590.10 110 441 2.3E-105 T 14-10-2018 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 Pfam PF00120 Glutamine synthetase, catalytic domain 108 437 3.4E-110 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 243 258 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 SMART SM01230 107 362 5.0E-111 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 SUPERFAMILY SSF55931 107 440 1.67E-113 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 Gene3D G3DSA:3.10.20.70 1 108 1.0E-8 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_04380 a7673dd7ce37d7c92767c4b441998bff 443 SUPERFAMILY SSF54368 2 106 3.79E-24 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEJY3_14120 326dc711e708db4b3d6362738a12fede 179 Pfam PF10400 Virulence activator alpha C-term 92 176 4.0E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal VEJY3_14120 326dc711e708db4b3d6362738a12fede 179 SUPERFAMILY SSF46785 3 176 5.65E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_14120 326dc711e708db4b3d6362738a12fede 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_14120 326dc711e708db4b3d6362738a12fede 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal VEJY3_08230 566ce69b2f79beee09b555641fb9e233 363 Gene3D G3DSA:2.40.160.10 136 363 5.6E-10 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_08230 566ce69b2f79beee09b555641fb9e233 363 SUPERFAMILY SSF56935 26 363 1.19E-27 T 14-10-2018 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.7E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 1.8E-62 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 SUPERFAMILY SSF55347 131 320 2.17E-78 T 14-10-2018 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 SMART SM00859 6 121 1.9E-40 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 Gene3D G3DSA:3.40.50.720 7 330 1.6E-152 T 14-10-2018 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.44 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 Gene3D G3DSA:3.30.360.10 130 316 1.6E-152 T 14-10-2018 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 PIRSF PIRSF000148 4 337 4.6E-134 T 14-10-2018 VEJY3_11290 058d11ba51936ce69832e4624172effc 337 SUPERFAMILY SSF51735 5 159 2.15E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19806 3f9d294daf893eb40101dcb445d07a81 54 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-16 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEJY3_19806 3f9d294daf893eb40101dcb445d07a81 54 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 16.938 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEJY3_19806 3f9d294daf893eb40101dcb445d07a81 54 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.5E-24 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 SUPERFAMILY SSF52540 316 518 1.41E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 Pfam PF00005 ABC transporter 340 473 1.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 SUPERFAMILY SSF90123 13 289 1.44E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 Pfam PF00664 ABC transporter transmembrane region 45 251 7.9E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 Gene3D G3DSA:1.20.1560.10 4 311 1.9E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 SMART SM00382 349 518 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 Gene3D G3DSA:3.40.50.300 316 532 7.1E-51 T 14-10-2018 VEJY3_00405 bedaa349a38d17a617653686ccc8eb20 532 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16061 ebf62953a6bf8decba80f678c7bda25c 207 Gene3D G3DSA:3.20.20.70 1 207 3.9E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_16061 ebf62953a6bf8decba80f678c7bda25c 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_16061 ebf62953a6bf8decba80f678c7bda25c 207 Pfam PF01081 KDPG and KHG aldolase 6 196 5.9E-71 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_16061 ebf62953a6bf8decba80f678c7bda25c 207 SUPERFAMILY SSF51569 3 205 4.21E-65 T 14-10-2018 VEJY3_16061 ebf62953a6bf8decba80f678c7bda25c 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_15485 9936cf4684bf7aa1aef3ee623ef778b5 129 Pfam PF03899 ATP synthase I chain 16 111 8.2E-21 T 14-10-2018 IPR005598 ATP synthase protein I VEJY3_15005 7adc5137fc82cdff9b4fd45dfc42d746 205 PIRSF PIRSF006324 1 205 1.6E-54 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_15005 7adc5137fc82cdff9b4fd45dfc42d746 205 Pfam PF01810 LysE type translocator 15 202 3.4E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.5E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Gene3D G3DSA:3.40.50.970 1 324 2.3E-132 T 14-10-2018 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 SUPERFAMILY SSF52518 332 525 1.03E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 SUPERFAMILY SSF52518 5 328 1.21E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 2.0E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 SUPERFAMILY SSF52922 532 663 6.54E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Gene3D G3DSA:3.40.50.970 325 536 6.7E-85 T 14-10-2018 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Pfam PF02780 Transketolase, C-terminal domain 542 654 2.6E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 SMART SM00861 353 524 2.0E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 Gene3D G3DSA:3.40.50.920 537 663 4.6E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEJY3_17721 82c7627dcd004c4d38ffd5c3d3707c50 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEJY3_10240 9352e8befb59e08be2421b7d99faaf4c 206 SUPERFAMILY SSF55821 1 203 7.63E-65 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEJY3_10240 9352e8befb59e08be2421b7d99faaf4c 206 Pfam PF01300 Telomere recombination 23 198 3.0E-47 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VEJY3_10240 9352e8befb59e08be2421b7d99faaf4c 206 Gene3D G3DSA:3.90.870.10 1 205 2.8E-69 T 14-10-2018 VEJY3_04230 3193f73f9db25ab69db76a6538f51fba 97 Gene3D G3DSA:1.10.150.280 24 96 7.7E-23 T 14-10-2018 VEJY3_04230 3193f73f9db25ab69db76a6538f51fba 97 SUPERFAMILY SSF47781 22 97 1.22E-26 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_04230 3193f73f9db25ab69db76a6538f51fba 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 3.8E-22 T 14-10-2018 VEJY3_01855 429ab49a7fb77d9dd5a28eaefe8d1f2b 160 SUPERFAMILY SSF55083 1 148 7.06E-38 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_01855 429ab49a7fb77d9dd5a28eaefe8d1f2b 160 Gene3D G3DSA:3.30.70.560 1 153 6.2E-33 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_01855 429ab49a7fb77d9dd5a28eaefe8d1f2b 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 6.9E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEJY3_07880 30dfb0f2677deedb86b9ecbaf9972857 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 7.0E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VEJY3_18111 49b80155c2f897233bfd110d86240bc8 117 Gene3D G3DSA:1.10.700.10 1 117 3.8E-47 T 14-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily VEJY3_18111 49b80155c2f897233bfd110d86240bc8 117 SUPERFAMILY SSF48076 3 116 5.75E-42 T 14-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily VEJY3_18111 49b80155c2f897233bfd110d86240bc8 117 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 27 112 3.2E-37 T 14-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit VEJY3_02470 5cf6933f602467003b030bdecf404cb0 357 Pfam PF00793 DAHP synthetase I family 42 340 3.7E-104 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEJY3_02470 5cf6933f602467003b030bdecf404cb0 357 Gene3D G3DSA:3.20.20.70 3 348 1.6E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_02470 5cf6933f602467003b030bdecf404cb0 357 SUPERFAMILY SSF51569 8 345 2.66E-138 T 14-10-2018 VEJY3_02470 5cf6933f602467003b030bdecf404cb0 357 PIRSF PIRSF001361 1 354 1.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEJY3_16166 26d4f8afb9dedf4b02d08d8c5de2bc94 320 SUPERFAMILY SSF48695 1 132 7.82E-39 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_16166 26d4f8afb9dedf4b02d08d8c5de2bc94 320 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 1 130 7.2E-52 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEJY3_16166 26d4f8afb9dedf4b02d08d8c5de2bc94 320 Gene3D G3DSA:1.10.3820.10 1 136 2.2E-22 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEJY3_08550 78fbb1c791d2f2b003a9a7cd200a5fb6 159 SUPERFAMILY SSF55729 11 138 7.33E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_08550 78fbb1c791d2f2b003a9a7cd200a5fb6 159 Pfam PF13302 Acetyltransferase (GNAT) domain 37 132 2.3E-13 T 14-10-2018 IPR000182 GNAT domain VEJY3_08550 78fbb1c791d2f2b003a9a7cd200a5fb6 159 Gene3D G3DSA:3.40.630.30 9 158 5.1E-19 T 14-10-2018 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 5.3E-205 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 5.9E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 9.4E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 Gene3D G3DSA:3.30.1360.60 3 78 1.0E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 SUPERFAMILY SSF55604 9 82 2.75E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_03270 e572613afb47ea6b814b4619d52698f4 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.2E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 Pfam PF00083 Sugar (and other) transporter 25 477 2.2E-103 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 SUPERFAMILY SSF103473 14 477 3.66E-68 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 Gene3D G3DSA:1.20.1250.20 14 478 4.3E-120 T 14-10-2018 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 PRINTS PR00171 Sugar transporter signature 32 42 7.0E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 PRINTS PR00171 Sugar transporter signature 397 409 7.0E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 PRINTS PR00171 Sugar transporter signature 115 134 7.0E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 PRINTS PR00171 Sugar transporter signature 374 395 7.0E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 PRINTS PR00171 Sugar transporter signature 280 290 7.0E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 VEJY3_08670 309285e4a1563d1f4f7c2b962b638e58 484 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_02980 0da4de7e0a182caca1e3e6fb15916c23 554 PIRSF PIRSF003128 1 554 9.8E-163 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VEJY3_02980 0da4de7e0a182caca1e3e6fb15916c23 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 509 2.0E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VEJY3_02980 0da4de7e0a182caca1e3e6fb15916c23 554 Gene3D G3DSA:3.40.50.300 331 553 1.9E-45 T 14-10-2018 VEJY3_02980 0da4de7e0a182caca1e3e6fb15916c23 554 Gene3D G3DSA:3.40.50.300 1 222 9.1E-43 T 14-10-2018 VEJY3_02980 0da4de7e0a182caca1e3e6fb15916c23 554 SUPERFAMILY SSF52540 1 509 2.66E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10755 8364027f84a16cdbd3e67d23bdae9a03 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 VEJY3_10755 8364027f84a16cdbd3e67d23bdae9a03 358 SUPERFAMILY SSF52540 96 343 2.9E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10755 8364027f84a16cdbd3e67d23bdae9a03 358 Gene3D G3DSA:3.40.50.300 80 336 7.5E-85 T 14-10-2018 VEJY3_10755 8364027f84a16cdbd3e67d23bdae9a03 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 6.5E-100 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VEJY3_10755 8364027f84a16cdbd3e67d23bdae9a03 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.438 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VEJY3_00025 7563458ab3c61051b4f3ce574939d81c 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 5.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEJY3_00025 7563458ab3c61051b4f3ce574939d81c 85 Pfam PF01809 Haemolytic domain 10 75 1.6E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEJY3_00025 7563458ab3c61051b4f3ce574939d81c 85 SMART SM01234 8 75 1.9E-41 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEJY3_00025 7563458ab3c61051b4f3ce574939d81c 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.437 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEJY3_03620 fb4ac32bfc05ddfccd5abf867bd8cd0e 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.1E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_03620 fb4ac32bfc05ddfccd5abf867bd8cd0e 322 Gene3D G3DSA:3.40.50.1100 12 306 4.3E-125 T 14-10-2018 VEJY3_03620 fb4ac32bfc05ddfccd5abf867bd8cd0e 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VEJY3_03620 fb4ac32bfc05ddfccd5abf867bd8cd0e 322 SUPERFAMILY SSF53686 3 313 4.45E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_03620 fb4ac32bfc05ddfccd5abf867bd8cd0e 322 Gene3D G3DSA:3.40.50.1100 43 145 4.3E-125 T 14-10-2018 VEJY3_09305 3aa55d5a5f614ec1de7e79e60d450a53 325 SUPERFAMILY SSF56112 14 299 6.81E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_09305 3aa55d5a5f614ec1de7e79e60d450a53 325 Gene3D G3DSA:3.30.200.20 2 100 4.7E-11 T 14-10-2018 VEJY3_09305 3aa55d5a5f614ec1de7e79e60d450a53 325 Pfam PF01636 Phosphotransferase enzyme family 19 243 1.1E-17 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VEJY3_09305 3aa55d5a5f614ec1de7e79e60d450a53 325 Gene3D G3DSA:3.90.1200.10 138 320 1.6E-19 T 14-10-2018 VEJY3_01255 030747357d4af647ace336e686ab4b31 181 Gene3D G3DSA:3.30.70.1070 101 179 8.5E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_01255 030747357d4af647ace336e686ab4b31 181 SUPERFAMILY SSF110997 106 177 3.27E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_01255 030747357d4af647ace336e686ab4b31 181 Pfam PF05036 Sporulation related domain 107 176 7.6E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.3E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 Gene3D G3DSA:3.40.50.1370 151 319 1.4E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 Gene3D G3DSA:3.40.50.1370 5 329 1.4E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 SUPERFAMILY SSF53671 4 333 7.33E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.5E-56 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEJY3_13610 23b0fce084301bd69fe3888453dab51d 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.159 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VEJY3_03790 f6d2c680f4bc89896ee6317bd2e7a908 167 Pfam PF14539 Domain of unknown function (DUF4442) 19 151 1.1E-22 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VEJY3_03790 f6d2c680f4bc89896ee6317bd2e7a908 167 SUPERFAMILY SSF54637 11 156 1.14E-22 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_03790 f6d2c680f4bc89896ee6317bd2e7a908 167 Gene3D G3DSA:3.10.129.10 21 157 6.0E-24 T 14-10-2018 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 SMART SM00345 10 69 3.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 Pfam PF07702 UTRA domain 95 229 3.1E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 SUPERFAMILY SSF64288 57 236 2.51E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 SMART SM00866 90 229 3.0E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 4.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 Gene3D G3DSA:1.10.10.10 4 74 1.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 SUPERFAMILY SSF46785 2 80 7.17E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 Gene3D G3DSA:3.40.1410.10 75 233 2.7E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_09105 0989b0a8de1e8a69e5c753a79b626853 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_03700 91848c22c92427c37aac5ef12b7aa8f2 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 55 0.002 T 14-10-2018 VEJY3_11240 a14620b6b255b2216f8602bd8c793c1d 365 SUPERFAMILY SSF52172 21 137 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_11240 a14620b6b255b2216f8602bd8c793c1d 365 SMART SM00448 20 132 6.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_11240 a14620b6b255b2216f8602bd8c793c1d 365 Gene3D G3DSA:3.60.40.10 164 347 1.3E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEJY3_11240 a14620b6b255b2216f8602bd8c793c1d 365 Gene3D G3DSA:3.40.50.2300 8 148 6.0E-34 T 14-10-2018 VEJY3_11240 a14620b6b255b2216f8602bd8c793c1d 365 Pfam PF00072 Response regulator receiver domain 22 132 4.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Pfam PF08245 Mur ligase middle domain 113 279 9.6E-32 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 SUPERFAMILY SSF53244 299 436 1.88E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 SUPERFAMILY SSF51984 9 97 8.89E-17 T 14-10-2018 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.15 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Gene3D G3DSA:3.40.50.720 6 96 2.3E-19 T 14-10-2018 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 SUPERFAMILY SSF53623 98 297 6.02E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 353 5.3E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Gene3D G3DSA:3.40.1190.10 97 299 1.3E-67 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEJY3_02070 f73e8ada7d1ad635fdbc8e2f88b757a7 437 Gene3D G3DSA:3.90.190.20 300 433 8.9E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEJY3_23736 f72e6574c6ddb467c1ac7f691cf009cd 100 Gene3D G3DSA:3.30.1360.60 18 99 3.1E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_23736 f72e6574c6ddb467c1ac7f691cf009cd 100 Pfam PF00367 phosphotransferase system, EIIB 26 57 3.7E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_23736 f72e6574c6ddb467c1ac7f691cf009cd 100 SUPERFAMILY SSF55604 23 96 2.35E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_22526 11fb41d83f99c65111bccc20f75ac50a 334 PIRSF PIRSF006470 1 330 1.4E-98 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEJY3_22526 11fb41d83f99c65111bccc20f75ac50a 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 285 2.8E-73 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEJY3_22526 11fb41d83f99c65111bccc20f75ac50a 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 314 3.2E-85 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_22526 11fb41d83f99c65111bccc20f75ac50a 334 Gene3D G3DSA:3.40.190.170 26 327 1.7E-98 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 PIRSF PIRSF000437 19 808 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 SUPERFAMILY SSF69593 241 488 4.32E-25 T 14-10-2018 VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 PIRSF PIRSF500064 2 808 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 Pfam PF01553 Acyltransferase 289 424 3.9E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.421 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VEJY3_14890 eb018fec0618490b8a978d65c7e4959a 808 SMART SM00563 300 427 9.3E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_00680 0d76844794a53e275584f51978531833 175 Gene3D G3DSA:3.40.50.2020 40 173 1.9E-16 T 14-10-2018 VEJY3_00680 0d76844794a53e275584f51978531833 175 SUPERFAMILY SSF53271 2 171 8.13E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_00680 0d76844794a53e275584f51978531833 175 Pfam PF00156 Phosphoribosyl transferase domain 80 172 1.7E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 SUPERFAMILY SSF53383 1 392 1.14E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 Gene3D G3DSA:3.90.1150.10 11 389 1.4E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 Gene3D G3DSA:3.40.640.10 45 312 1.4E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 Pfam PF00155 Aminotransferase class I and II 27 389 1.5E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 3.5E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 3.5E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 3.5E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_19716 b169a664b67500e5c8b0dd40b550c681 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 3.5E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEJY3_16346 1fc9c486e7641a1de6ed0d1f74ae157a 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 1.2E-33 T 14-10-2018 VEJY3_16346 1fc9c486e7641a1de6ed0d1f74ae157a 142 SUPERFAMILY SSF50630 6 140 1.01E-43 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_16346 1fc9c486e7641a1de6ed0d1f74ae157a 142 Gene3D G3DSA:2.40.70.10 3 133 1.2E-33 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 Pfam PF02272 DHHA1 domain 319 451 8.5E-27 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 Gene3D G3DSA:3.10.310.30 325 452 1.4E-30 T 14-10-2018 VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 Gene3D G3DSA:2.40.50.460 453 579 2.3E-9 T 14-10-2018 VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 Gene3D G3DSA:3.90.1640.30 45 323 2.6E-89 T 14-10-2018 VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 Pfam PF01368 DHH family 71 204 2.5E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEJY3_02310 59f84d4fe62ce8c6475bed5509fd9993 579 SUPERFAMILY SSF64182 45 464 5.36E-119 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VEJY3_16701 e956c12de3e134cfa31f00d2d50e6100 120 SUPERFAMILY SSF54593 12 119 9.26E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_16701 e956c12de3e134cfa31f00d2d50e6100 120 Gene3D G3DSA:3.10.180.10 8 120 2.1E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_16701 e956c12de3e134cfa31f00d2d50e6100 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 4.3E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_21066 2b4f9bb9183be1a7c5743645dcd15f43 110 SUPERFAMILY SSF103481 10 108 1.02E-7 T 14-10-2018 VEJY3_21066 2b4f9bb9183be1a7c5743645dcd15f43 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 25.094 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 VEJY3_21066 2b4f9bb9183be1a7c5743645dcd15f43 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 5 108 4.4E-40 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 VEJY3_12965 27825433b55ecbe74a9f0f4e995747bc 256 Pfam PF01061 ABC-2 type transporter 8 218 2.6E-39 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VEJY3_12965 27825433b55ecbe74a9f0f4e995747bc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_12965 27825433b55ecbe74a9f0f4e995747bc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_12965 27825433b55ecbe74a9f0f4e995747bc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_12965 27825433b55ecbe74a9f0f4e995747bc 256 PIRSF PIRSF006648 7 252 1.6E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEJY3_01220 c4940e5f0e4be4d9f89902327c70449e 204 SUPERFAMILY SSF46785 5 183 3.46E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_01220 c4940e5f0e4be4d9f89902327c70449e 204 Gene3D G3DSA:1.10.10.10 2 85 1.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_01220 c4940e5f0e4be4d9f89902327c70449e 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 4.7E-6 T 14-10-2018 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 Gene3D G3DSA:3.40.190.290 90 292 1.1E-41 T 14-10-2018 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 Pfam PF03466 LysR substrate binding domain 89 288 1.6E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_18341 c965a74e5541a1304620f4f412527917 292 SUPERFAMILY SSF46785 1 110 3.89E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18341 c965a74e5541a1304620f4f412527917 292 SUPERFAMILY SSF53850 90 290 1.21E-40 T 14-10-2018 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 Gene3D G3DSA:1.10.10.10 1 88 3.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18341 c965a74e5541a1304620f4f412527917 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_18341 c965a74e5541a1304620f4f412527917 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14945 e24fc6f857dc3e224f58bdd03e34827d 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 2.3E-19 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 VEJY3_11880 892f7d36a2ee52e8e2dc57c36bc31685 116 SUPERFAMILY SSF52833 2 116 1.95E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_11880 892f7d36a2ee52e8e2dc57c36bc31685 116 Pfam PF03960 ArsC family 6 115 2.5E-19 T 14-10-2018 IPR006660 Arsenate reductase-like VEJY3_11880 892f7d36a2ee52e8e2dc57c36bc31685 116 Gene3D G3DSA:3.40.30.10 1 116 7.0E-49 T 14-10-2018 VEJY3_21616 32496ff7bdbbd61b888526bbab81022b 283 Pfam PF00231 ATP synthase 6 270 6.3E-29 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21616 32496ff7bdbbd61b888526bbab81022b 283 SUPERFAMILY SSF52943 6 272 2.22E-29 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21616 32496ff7bdbbd61b888526bbab81022b 283 Gene3D G3DSA:1.10.287.80 8 267 4.7E-25 T 14-10-2018 VEJY3_21616 32496ff7bdbbd61b888526bbab81022b 283 Gene3D G3DSA:3.40.1380.10 61 196 4.7E-25 T 14-10-2018 VEJY3_05670 c4082e698bc8d427d37e85d359fdd3a7 579 Gene3D G3DSA:3.20.20.70 189 495 1.4E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_05670 c4082e698bc8d427d37e85d359fdd3a7 579 Pfam PF02065 Melibiase 160 352 8.2E-19 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEJY3_05670 c4082e698bc8d427d37e85d359fdd3a7 579 SUPERFAMILY SSF51445 193 534 3.41E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_07120 aa9198c13a0a3690419847bae350bb60 668 Gene3D G3DSA:1.10.287.950 341 668 6.2E-58 T 14-10-2018 VEJY3_07120 aa9198c13a0a3690419847bae350bb60 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 633 3.1E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_07120 aa9198c13a0a3690419847bae350bb60 668 SUPERFAMILY SSF58104 359 667 1.7E-59 T 14-10-2018 VEJY3_07120 aa9198c13a0a3690419847bae350bb60 668 SMART SM00283 405 667 1.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 8.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 8.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 8.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 SUPERFAMILY SSF54909 72 155 2.68E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 SMART SM00344 7 116 5.8E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 Gene3D G3DSA:1.10.10.10 8 59 3.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 Gene3D G3DSA:3.30.70.920 63 154 2.9E-13 T 14-10-2018 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 Pfam PF01037 Lrp/AsnC ligand binding domain 75 147 1.0E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 6.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEJY3_11080 99f6fb6549f64da6e2b60e4f9ea76298 157 SUPERFAMILY SSF46785 6 61 3.3E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 237 251 3.8E-19 T 14-10-2018 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 214 230 3.8E-19 T 14-10-2018 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 353 377 3.8E-19 T 14-10-2018 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 331 3.8E-19 T 14-10-2018 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 SUPERFAMILY SSF53335 10 566 5.79E-137 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 Pfam PF02384 N-6 DNA Methylase 190 526 1.0E-114 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 Gene3D G3DSA:3.40.50.150 191 510 2.3E-124 T 14-10-2018 VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 Gene3D G3DSA:1.20.1260.30 1 181 1.1E-57 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VEJY3_11790 6ed32348fc8d4e01c0a8b7b77725bc62 567 Pfam PF12161 HsdM N-terminal domain 12 178 5.6E-24 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VEJY3_14245 72a25e31d8a7c54519b2c171d19925f5 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 2.5E-28 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VEJY3_07560 296e8fb6f21d357749ae140726caa70e 172 Gene3D G3DSA:3.10.129.10 2 172 2.9E-66 T 14-10-2018 VEJY3_07560 296e8fb6f21d357749ae140726caa70e 172 Pfam PF07977 FabA-like domain 29 158 9.1E-55 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_07560 296e8fb6f21d357749ae140726caa70e 172 SUPERFAMILY SSF54637 4 169 2.92E-57 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_07560 296e8fb6f21d357749ae140726caa70e 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.643 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 7.7E-68 T 14-10-2018 VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 SUPERFAMILY SSF51735 4 243 5.09E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 4.8E-5 T 14-10-2018 VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 Gene3D G3DSA:3.40.50.720 1 244 1.3E-89 T 14-10-2018 VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 9.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_10685 47a9287df0e69d65dec3960c6fc4b662 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 9.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_22031 5f867374a1754b55285318d7baa2fb39 427 Pfam PF01551 Peptidase family M23 295 388 1.5E-31 T 14-10-2018 IPR016047 Peptidase M23 VEJY3_22031 5f867374a1754b55285318d7baa2fb39 427 Gene3D G3DSA:3.10.450.350 160 264 2.5E-32 T 14-10-2018 VEJY3_22031 5f867374a1754b55285318d7baa2fb39 427 SUPERFAMILY SSF51261 143 390 5.18E-67 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_22031 5f867374a1754b55285318d7baa2fb39 427 Gene3D G3DSA:2.70.70.10 265 395 4.5E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_22031 5f867374a1754b55285318d7baa2fb39 427 Gene3D G3DSA:3.10.450.350 66 158 2.8E-32 T 14-10-2018 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 285 4.9E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.157 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Gene3D G3DSA:3.30.1370.170 294 377 1.7E-31 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 SUPERFAMILY SSF52283 1 109 1.45E-23 T 14-10-2018 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 4.1E-27 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 1.3E-33 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Gene3D G3DSA:3.40.50.720 93 258 9.5E-113 T 14-10-2018 VEJY3_11295 56465258966ce254875861b2bd5128dd 377 SUPERFAMILY SSF51735 93 258 2.53E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_11295 56465258966ce254875861b2bd5128dd 377 Gene3D G3DSA:3.40.50.720 1 279 9.5E-113 T 14-10-2018 VEJY3_09350 a5e4a6f06d42bc0b62b0bdd6e21945c0 142 Pfam PF01872 RibD C-terminal domain 6 128 2.4E-10 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VEJY3_09350 a5e4a6f06d42bc0b62b0bdd6e21945c0 142 SUPERFAMILY SSF53597 3 136 3.27E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_09350 a5e4a6f06d42bc0b62b0bdd6e21945c0 142 Gene3D G3DSA:3.40.430.10 1 138 2.3E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEJY3_11795 c0f2445eb4fafbcff4fbf8575f816275 198 Gene3D G3DSA:1.10.443.10 12 184 7.3E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_11795 c0f2445eb4fafbcff4fbf8575f816275 198 Pfam PF00589 Phage integrase family 36 183 2.0E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_11795 c0f2445eb4fafbcff4fbf8575f816275 198 SUPERFAMILY SSF56349 11 194 5.89E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_20486 f6be746ba4c13be071dbbffe873bad46 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 7.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_20486 f6be746ba4c13be071dbbffe873bad46 222 SUPERFAMILY SSF161098 9 202 4.06E-31 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20486 f6be746ba4c13be071dbbffe873bad46 222 Gene3D G3DSA:1.10.3720.10 3 217 5.4E-41 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09725 837bfa9332d17cdd391330d43b41de4c 174 Pfam PF16461 Lambda phage tail tube protein, TTP 7 168 6.6E-13 T 14-10-2018 IPR032494 Lambda phage tail tube protein VEJY3_09725 837bfa9332d17cdd391330d43b41de4c 174 Gene3D G3DSA:2.30.110.60 1 167 5.0E-48 T 14-10-2018 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 Pfam PF00520 Ion transport protein 24 233 3.6E-32 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 SUPERFAMILY SSF81324 23 234 9.99E-54 T 14-10-2018 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 58 81 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 207 233 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 120 146 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 84 104 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 149 172 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 178 200 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 PRINTS PR00169 Potassium channel signature 16 44 4.0E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEJY3_11015 dbcb5654d5156231b377335a52edb4cd 285 Gene3D G3DSA:1.10.287.70 23 236 1.2E-58 T 14-10-2018 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 SUPERFAMILY SSF81442 38 545 2.62E-193 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 Gene3D G3DSA:1.20.210.10 28 546 2.2E-219 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 545 4.8E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 5.9E-151 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_21961 932f870966ab349fa391b00b3d3c3a89 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_06695 cc6f6c33ce198f6c8c592e95c24777e7 159 Pfam PF06841 T4-like virus tail tube protein gp19 17 155 2.7E-44 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 188 307 1.5E-23 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 SUPERFAMILY SSF51735 1 114 8.59E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 157 7.1E-30 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 Gene3D G3DSA:1.10.1040.10 188 314 1.2E-27 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 Gene3D G3DSA:3.40.50.720 1 187 1.8E-42 T 14-10-2018 VEJY3_08180 6ae621ecaa83ad35f150488fe1b8a72e 320 SUPERFAMILY SSF48179 188 309 4.08E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_08790 6b33c0ea148aead6dafedbc0340757a7 173 Gene3D G3DSA:3.40.630.30 1 161 2.9E-22 T 14-10-2018 VEJY3_08790 6b33c0ea148aead6dafedbc0340757a7 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 124 6.0E-10 T 14-10-2018 VEJY3_08790 6b33c0ea148aead6dafedbc0340757a7 173 SUPERFAMILY SSF55729 9 132 2.03E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 Gene3D G3DSA:3.90.70.10 352 467 7.2E-33 T 14-10-2018 VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 Gene3D G3DSA:1.10.101.10 468 535 1.2E-22 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 Pfam PF01471 Putative peptidoglycan binding domain 479 530 4.5E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 Pfam PF13401 AAA domain 42 171 7.3E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 SUPERFAMILY SSF52540 6 264 7.01E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 SMART SM00382 42 195 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 SUPERFAMILY SSF47090 464 535 2.04E-11 T 14-10-2018 IPR036365 PGBD-like superfamily VEJY3_01870 9fc2bca41701f335fe170ec94a5c6404 549 Gene3D G3DSA:3.40.50.300 25 184 6.5E-14 T 14-10-2018 VEJY3_20491 152ada383078325cf9bea62624c3d027 229 SUPERFAMILY SSF161098 10 202 3.92E-38 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20491 152ada383078325cf9bea62624c3d027 229 Gene3D G3DSA:1.10.3720.10 2 218 2.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20491 152ada383078325cf9bea62624c3d027 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 217 2.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_10810 e4135c24d96ddff31519357ed89df4c4 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 269 1.2E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_10665 3a35be1f3247909d006689bb0779cf49 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.02 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VEJY3_10665 3a35be1f3247909d006689bb0779cf49 338 Gene3D G3DSA:3.30.160.60 302 338 7.0E-17 T 14-10-2018 VEJY3_10665 3a35be1f3247909d006689bb0779cf49 338 Gene3D G3DSA:1.10.8.1150 38 111 3.0E-9 T 14-10-2018 VEJY3_10665 3a35be1f3247909d006689bb0779cf49 338 Pfam PF02618 YceG-like family 43 328 1.4E-82 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VEJY3_06810 1451130c2ea800547e7d29d16a28d8a9 452 SUPERFAMILY SSF103473 8 436 1.96E-62 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_06810 1451130c2ea800547e7d29d16a28d8a9 452 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 319 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_06810 1451130c2ea800547e7d29d16a28d8a9 452 Gene3D G3DSA:1.20.1250.20 18 451 2.5E-60 T 14-10-2018 VEJY3_06810 1451130c2ea800547e7d29d16a28d8a9 452 Pfam PF00083 Sugar (and other) transporter 25 433 2.3E-23 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 VEJY3_16176 58a6e90f380cacc271e4505a3e3ebdc9 166 Pfam PF01569 PAP2 superfamily 8 154 2.0E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEJY3_16176 58a6e90f380cacc271e4505a3e3ebdc9 166 SUPERFAMILY SSF48317 7 149 2.62E-18 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEJY3_16176 58a6e90f380cacc271e4505a3e3ebdc9 166 Gene3D G3DSA:1.20.144.10 2 160 3.3E-39 T 14-10-2018 VEJY3_16176 58a6e90f380cacc271e4505a3e3ebdc9 166 SMART SM00014 2 150 8.9E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 SUPERFAMILY SSF52540 351 601 2.77E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 SUPERFAMILY SSF90123 19 516 7.59E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 SMART SM00382 386 577 6.1E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 Gene3D G3DSA:1.20.1560.10 8 334 1.1E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 Pfam PF00005 ABC transporter 378 531 5.4E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 Gene3D G3DSA:3.40.50.300 351 604 9.6E-93 T 14-10-2018 VEJY3_23231 2c5019d0cca6662281d89e6dd820f5d4 608 Pfam PF00664 ABC transporter transmembrane region 39 308 4.3E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEJY3_09330 d75c27167b44c38c18add828f18a21cc 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_09330 d75c27167b44c38c18add828f18a21cc 314 Pfam PF00294 pfkB family carbohydrate kinase 1 295 2.5E-65 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_09330 d75c27167b44c38c18add828f18a21cc 314 Gene3D G3DSA:3.40.1190.20 2 311 3.0E-79 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_09330 d75c27167b44c38c18add828f18a21cc 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_09330 d75c27167b44c38c18add828f18a21cc 314 SUPERFAMILY SSF53613 1 303 4.21E-71 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 Gene3D G3DSA:3.40.50.300 1 209 1.7E-76 T 14-10-2018 VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 499 50.604 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 SMART SM00490 257 338 8.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 SMART SM00487 20 221 5.1E-64 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.9E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 Gene3D G3DSA:3.40.50.300 214 412 2.6E-45 T 14-10-2018 VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 SUPERFAMILY SSF52540 73 359 8.61E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_17286 673ba3f8bb5cfdb7932ddaa94485f855 506 Pfam PF00271 Helicase conserved C-terminal domain 233 338 5.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal VEJY3_10065 efd4e6a6a2160ebac0ec6ea1bd3a942b 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.4E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 PIRSF PIRSF002741 415 583 7.1E-6 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 PIRSF PIRSF002741 90 322 4.6E-30 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 312 3.0E-21 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 2.0E-34 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 Gene3D G3DSA:3.40.190.10 119 335 1.1E-31 T 14-10-2018 VEJY3_22086 73686dc1c1f61f61167ea476854b18ca 585 SUPERFAMILY SSF53850 117 583 1.38E-63 T 14-10-2018 VEJY3_20446 3bd5d722f2668538e686c48d6f2f1716 733 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 42 732 7.4E-151 T 14-10-2018 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22 VEJY3_20446 3bd5d722f2668538e686c48d6f2f1716 733 SUPERFAMILY SSF53474 287 641 3.57E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_08710 7d7ea6dc882c73ddca9122d301d9f1a8 231 Gene3D G3DSA:3.40.50.300 3 199 4.7E-20 T 14-10-2018 VEJY3_08710 7d7ea6dc882c73ddca9122d301d9f1a8 231 SUPERFAMILY SSF52540 25 205 8.55E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00445 e75b274a3ede6c4f2dc48d28f3393967 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.225 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VEJY3_00445 e75b274a3ede6c4f2dc48d28f3393967 544 Pfam PF03109 ABC1 family 112 230 3.2E-35 T 14-10-2018 IPR004147 UbiB domain VEJY3_00445 e75b274a3ede6c4f2dc48d28f3393967 544 SUPERFAMILY SSF56112 94 436 8.44E-47 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_00865 3e2c76b4eec7a7ddad1b1eb6b538dae5 224 SUPERFAMILY SSF47781 17 91 3.11E-11 T 14-10-2018 IPR010994 RuvA domain 2-like VEJY3_00865 3e2c76b4eec7a7ddad1b1eb6b538dae5 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VEJY3_00865 3e2c76b4eec7a7ddad1b1eb6b538dae5 224 Pfam PF04002 RadC-like JAB domain 104 222 8.7E-45 T 14-10-2018 IPR025657 RadC-like JAB domain VEJY3_00865 3e2c76b4eec7a7ddad1b1eb6b538dae5 224 Gene3D G3DSA:3.40.140.10 101 224 4.8E-43 T 14-10-2018 VEJY3_19126 b3a145ab09233248b06655da814710ea 314 SUPERFAMILY SSF52540 12 186 1.81E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19126 b3a145ab09233248b06655da814710ea 314 Gene3D G3DSA:1.10.1580.10 177 268 1.0E-28 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VEJY3_19126 b3a145ab09233248b06655da814710ea 314 Pfam PF01926 50S ribosome-binding GTPase 120 185 3.9E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_19126 b3a145ab09233248b06655da814710ea 314 PIRSF PIRSF006230 2 280 2.2E-106 T 14-10-2018 IPR016478 GTPase, MTG1 VEJY3_19126 b3a145ab09233248b06655da814710ea 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 7.3E-108 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VEJY3_19126 b3a145ab09233248b06655da814710ea 314 Gene3D G3DSA:3.40.50.300 6 174 2.4E-43 T 14-10-2018 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 Gene3D G3DSA:1.10.3080.10 29 467 1.2E-142 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 PRINTS PR00762 Chloride channel signature 181 200 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 PRINTS PR00762 Chloride channel signature 385 401 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 PRINTS PR00762 Chloride channel signature 403 422 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 PRINTS PR00762 Chloride channel signature 350 370 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 PRINTS PR00762 Chloride channel signature 100 117 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 SUPERFAMILY SSF81340 27 451 3.4E-114 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 53.198 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VEJY3_17776 3ca3531fd4ff0e608feb52072a7b425f 467 Pfam PF00654 Voltage gated chloride channel 88 435 2.2E-94 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEJY3_19706 acabab1b856906fec0d3c9952ef0285a 461 PIRSF PIRSF006603 1 460 4.8E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_19706 acabab1b856906fec0d3c9952ef0285a 461 Pfam PF01554 MatE 22 180 3.8E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_19706 acabab1b856906fec0d3c9952ef0285a 461 Pfam PF01554 MatE 249 411 4.1E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_18431 b891bb4ad60dd36f47cd4255b09b4faa 397 SUPERFAMILY SSF56801 112 337 1.96E-28 T 14-10-2018 VEJY3_18431 b891bb4ad60dd36f47cd4255b09b4faa 397 Gene3D G3DSA:3.40.50.12780 2 313 9.4E-63 T 14-10-2018 VEJY3_18431 b891bb4ad60dd36f47cd4255b09b4faa 397 Pfam PF00501 AMP-binding enzyme 117 272 3.8E-12 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_13660 22da4f380a95824d48d39f70a47d9091 263 Pfam PF02405 Permease MlaE 48 259 2.7E-73 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VEJY3_07840 46aad96dd2284aa8e1e33794ea0af326 398 Gene3D G3DSA:3.10.310.10 16 390 1.0E-148 T 14-10-2018 VEJY3_07840 46aad96dd2284aa8e1e33794ea0af326 398 Pfam PF04303 PrpF protein 11 393 1.0E-174 T 14-10-2018 IPR007400 PrpF protein VEJY3_07840 46aad96dd2284aa8e1e33794ea0af326 398 Gene3D G3DSA:3.10.310.10 186 376 1.0E-148 T 14-10-2018 VEJY3_07840 46aad96dd2284aa8e1e33794ea0af326 398 SUPERFAMILY SSF54506 191 396 1.48E-75 T 14-10-2018 VEJY3_07840 46aad96dd2284aa8e1e33794ea0af326 398 SUPERFAMILY SSF54506 8 187 2.59E-71 T 14-10-2018 VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 SMART SM00382 31 229 1.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 PIRSF PIRSF039085 3 256 7.3E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 Pfam PF00005 ABC transporter 22 181 2.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 SUPERFAMILY SSF52540 7 251 6.34E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04620 3a9c393cefb91d615feed8987b0bfef0 256 Gene3D G3DSA:3.40.50.300 4 255 1.9E-74 T 14-10-2018 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 Pfam PF01435 Peptidase family M48 69 251 7.5E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 482 39.896 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 SUPERFAMILY SSF48452 310 454 2.09E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 Gene3D G3DSA:1.25.40.10 278 472 1.3E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 Pfam PF14559 Tetratricopeptide repeat 351 416 2.9E-9 T 14-10-2018 VEJY3_11875 68f2b8bc490bd60e587a250d901253a4 483 Gene3D G3DSA:3.30.2010.10 75 147 1.2E-6 T 14-10-2018 VEJY3_07175 0e7fa2a5e462835e4965d85cbf6908aa 272 Gene3D G3DSA:3.40.190.10 106 218 8.3E-97 T 14-10-2018 VEJY3_07175 0e7fa2a5e462835e4965d85cbf6908aa 272 Pfam PF12849 PBP superfamily domain 31 247 2.1E-27 T 14-10-2018 IPR024370 PBP domain VEJY3_07175 0e7fa2a5e462835e4965d85cbf6908aa 272 SUPERFAMILY SSF53850 29 257 2.5E-31 T 14-10-2018 VEJY3_07175 0e7fa2a5e462835e4965d85cbf6908aa 272 Gene3D G3DSA:3.40.190.10 31 255 8.3E-97 T 14-10-2018 VEJY3_12890 de8c26d5cf2dac1e16b083c2b48f93cd 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 3.8E-40 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEJY3_12890 de8c26d5cf2dac1e16b083c2b48f93cd 122 PIRSF PIRSF006287 1 122 5.3E-45 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEJY3_12890 de8c26d5cf2dac1e16b083c2b48f93cd 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 28.524 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEJY3_12890 de8c26d5cf2dac1e16b083c2b48f93cd 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-46 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 SMART SM00359 3 86 3.1E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 Gene3D G3DSA:2.30.130.10 1 72 8.7E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 376 1.0E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 Gene3D G3DSA:3.30.750.80 73 180 1.0E-35 T 14-10-2018 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 SUPERFAMILY SSF88697 4 73 5.04E-17 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 SUPERFAMILY SSF53335 78 393 9.97E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.384 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VEJY3_07730 25a8b6b68496ab473fec4cc595fa31b5 397 Gene3D G3DSA:3.40.50.150 181 396 1.7E-69 T 14-10-2018 VEJY3_22256 0a2fbcfc1311d0b7aad1676dc14c15be 334 Pfam PF12833 Helix-turn-helix domain 253 330 2.0E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_22256 0a2fbcfc1311d0b7aad1676dc14c15be 334 SUPERFAMILY SSF46689 281 331 1.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_22256 0a2fbcfc1311d0b7aad1676dc14c15be 334 SMART SM00342 249 328 7.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_22256 0a2fbcfc1311d0b7aad1676dc14c15be 334 Gene3D G3DSA:1.10.10.60 231 333 1.6E-22 T 14-10-2018 VEJY3_22256 0a2fbcfc1311d0b7aad1676dc14c15be 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_06715 f9b627960f36b2680a46170fc7b5e9d6 76 Pfam PF09016 Pas factor saposin fold 1 76 7.3E-41 T 14-10-2018 IPR015106 Pas factor saposin domain VEJY3_06715 f9b627960f36b2680a46170fc7b5e9d6 76 Gene3D G3DSA:1.20.1280.100 1 73 7.8E-38 T 14-10-2018 VEJY3_22746 0acdf9bdb7e68602547c05b417bca174 287 Gene3D G3DSA:2.40.50.100 41 111 3.5E-13 T 14-10-2018 VEJY3_22746 0acdf9bdb7e68602547c05b417bca174 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 228 6.5E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_22746 0acdf9bdb7e68602547c05b417bca174 287 Gene3D G3DSA:2.40.30.170 168 287 5.9E-28 T 14-10-2018 VEJY3_22746 0acdf9bdb7e68602547c05b417bca174 287 SUPERFAMILY SSF111369 38 237 8.37E-26 T 14-10-2018 VEJY3_23946 de3e1e3a32ba2581f60b0535fee3b2ae 466 Pfam PF00324 Amino acid permease 31 459 3.0E-30 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 VEJY3_23946 de3e1e3a32ba2581f60b0535fee3b2ae 466 PIRSF PIRSF006060 3 466 3.6E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_23946 de3e1e3a32ba2581f60b0535fee3b2ae 466 Gene3D G3DSA:1.20.1740.10 19 462 1.2E-56 T 14-10-2018 VEJY3_16191 c184a9410cbbf048fe26ae53a7c222ba 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 9.3E-45 T 14-10-2018 IPR004305 Thiaminase-2/PQQC VEJY3_16191 c184a9410cbbf048fe26ae53a7c222ba 222 SUPERFAMILY SSF48613 3 216 3.15E-66 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEJY3_16191 c184a9410cbbf048fe26ae53a7c222ba 222 Gene3D G3DSA:1.20.910.10 2 221 1.5E-61 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEJY3_05585 223bb766d28f9d9a6acf0ec636b9ec52 257 SUPERFAMILY SSF51366 1 256 1.26E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_05585 223bb766d28f9d9a6acf0ec636b9ec52 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.972 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VEJY3_05585 223bb766d28f9d9a6acf0ec636b9ec52 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.8E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VEJY3_05585 223bb766d28f9d9a6acf0ec636b9ec52 257 Gene3D G3DSA:3.20.20.70 1 257 2.6E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_05585 223bb766d28f9d9a6acf0ec636b9ec52 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.8E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 Gene3D G3DSA:3.40.190.10 162 267 2.2E-37 T 14-10-2018 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 SUPERFAMILY SSF46785 3 82 7.4E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 Pfam PF03466 LysR substrate binding domain 92 296 3.6E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 Gene3D G3DSA:3.40.190.10 100 293 2.2E-37 T 14-10-2018 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 Gene3D G3DSA:1.10.10.10 6 89 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17036 e78d1b30aff384c8f38fcc1ff584a2b5 304 SUPERFAMILY SSF53850 98 298 8.01E-22 T 14-10-2018 VEJY3_06370 8c927c3327f26b79199bc3d95cf0255c 331 Gene3D G3DSA:1.10.3470.10 5 328 3.8E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_06370 8c927c3327f26b79199bc3d95cf0255c 331 SUPERFAMILY SSF81345 7 326 5.23E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_06370 8c927c3327f26b79199bc3d95cf0255c 331 Pfam PF01032 FecCD transport family 25 326 2.1E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_06370 8c927c3327f26b79199bc3d95cf0255c 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.535 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VEJY3_24376 bd44c5de1a594e907b1ec30f2b138942 324 SUPERFAMILY SSF110849 72 150 1.02E-7 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEJY3_24376 bd44c5de1a594e907b1ec30f2b138942 324 SMART SM00470 53 149 1.7E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VEJY3_24376 bd44c5de1a594e907b1ec30f2b138942 324 Gene3D G3DSA:1.10.10.2830 153 270 3.9E-15 T 14-10-2018 VEJY3_24376 bd44c5de1a594e907b1ec30f2b138942 324 Pfam PF02195 ParB-like nuclease domain 78 147 5.0E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VEJY3_01805 1b26ef7e79eaca18c596e5165cdf1829 267 SUPERFAMILY SSF53850 31 267 7.24E-84 T 14-10-2018 VEJY3_01805 1b26ef7e79eaca18c596e5165cdf1829 267 Gene3D G3DSA:3.40.190.10 112 217 3.8E-93 T 14-10-2018 VEJY3_01805 1b26ef7e79eaca18c596e5165cdf1829 267 Gene3D G3DSA:3.40.190.10 32 262 3.8E-93 T 14-10-2018 VEJY3_01805 1b26ef7e79eaca18c596e5165cdf1829 267 PIRSF PIRSF002854 3 267 1.2E-90 T 14-10-2018 IPR004872 Lipoprotein NlpA family VEJY3_01805 1b26ef7e79eaca18c596e5165cdf1829 267 Pfam PF03180 NLPA lipoprotein 31 267 2.2E-87 T 14-10-2018 IPR004872 Lipoprotein NlpA family VEJY3_04845 27579eb25d1dc28da6ca332c2410a4a0 322 SUPERFAMILY SSF56059 43 279 1.61E-19 T 14-10-2018 VEJY3_04845 27579eb25d1dc28da6ca332c2410a4a0 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 3.5E-114 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 154 2.1E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 Pfam PF00593 TonB dependent receptor 256 697 5.7E-58 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 14-10-2018 IPR010916 TonB box, conserved site VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 Gene3D G3DSA:2.40.170.20 165 698 8.6E-130 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 Gene3D G3DSA:2.170.130.10 31 164 1.6E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 SUPERFAMILY SSF56935 31 698 8.14E-132 T 14-10-2018 VEJY3_23236 cd60b965fe0105614dbde6b96a989234 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 697 1.4E-103 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEJY3_11460 21c8e510a6f7f90f5fa8dac2292db979 164 SMART SM00260 16 153 9.1E-49 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_11460 21c8e510a6f7f90f5fa8dac2292db979 164 Gene3D G3DSA:2.40.50.180 39 148 1.8E-42 T 14-10-2018 VEJY3_11460 21c8e510a6f7f90f5fa8dac2292db979 164 Pfam PF01584 CheW-like domain 20 155 8.5E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEJY3_11460 21c8e510a6f7f90f5fa8dac2292db979 164 SUPERFAMILY SSF50341 15 158 2.49E-41 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEJY3_11460 21c8e510a6f7f90f5fa8dac2292db979 164 Gene3D G3DSA:2.30.30.40 22 147 1.8E-42 T 14-10-2018 VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.223 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 Pfam PF01327 Polypeptide deformylase 4 152 1.1E-50 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 Gene3D G3DSA:3.90.45.10 1 169 2.2E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 PIRSF PIRSF004749 1 171 4.5E-57 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 SUPERFAMILY SSF56420 3 165 6.02E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 PRINTS PR01576 Peptide deformylase signature 101 119 1.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 PRINTS PR01576 Peptide deformylase signature 120 149 1.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_15320 b5bdfa11d8f1181937a42e7a34afe616 172 PRINTS PR01576 Peptide deformylase signature 89 100 1.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VEJY3_18916 d0e9fd2fb099600e0d8031c0a50c37da 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 8.2E-25 T 14-10-2018 IPR025411 Domain of unknown function DUF4136 VEJY3_18916 d0e9fd2fb099600e0d8031c0a50c37da 172 Gene3D G3DSA:3.30.160.670 13 170 2.0E-25 T 14-10-2018 VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 Pfam PF12464 Maltose acetyltransferase 12 53 2.3E-5 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 SUPERFAMILY SSF51161 34 183 1.05E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 Gene3D G3DSA:2.160.10.10 7 181 3.4E-53 T 14-10-2018 VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 91 102 0.053 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_07250 609c43b64b649370f91a801a54d6c798 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 2.1E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_03905 6200d47131d698bb011edf75f5a4de12 76 Gene3D G3DSA:1.10.10.10 1 72 1.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_03905 6200d47131d698bb011edf75f5a4de12 76 SUPERFAMILY SSF46785 1 55 2.07E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_03905 6200d47131d698bb011edf75f5a4de12 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 3.8E-13 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VEJY3_00845 122e171a44e10d7a01e37e9105e3d408 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.225 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEJY3_00845 122e171a44e10d7a01e37e9105e3d408 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 9.6E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_00845 122e171a44e10d7a01e37e9105e3d408 213 SUPERFAMILY SSF53271 2 211 4.26E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_00845 122e171a44e10d7a01e37e9105e3d408 213 Gene3D G3DSA:3.40.50.2020 1 213 6.1E-80 T 14-10-2018 VEJY3_19761 9f7cb540f9ff018e28db260b04d6eb71 350 Gene3D G3DSA:3.30.70.270 159 343 3.0E-43 T 14-10-2018 VEJY3_19761 9f7cb540f9ff018e28db260b04d6eb71 350 SMART SM00267 157 341 2.5E-35 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19761 9f7cb540f9ff018e28db260b04d6eb71 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 268 1.8E-19 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19761 9f7cb540f9ff018e28db260b04d6eb71 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 336 5.9E-7 T 14-10-2018 IPR000160 GGDEF domain VEJY3_19761 9f7cb540f9ff018e28db260b04d6eb71 350 SUPERFAMILY SSF55073 173 343 2.04E-32 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_05985 71189d079a3e65f820a71248e0d95445 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 2.0E-76 T 14-10-2018 IPR005642 Lysine exporter LysO VEJY3_05985 71189d079a3e65f820a71248e0d95445 301 Pfam PF03956 Lysine exporter LysO 112 297 3.6E-53 T 14-10-2018 IPR005642 Lysine exporter LysO VEJY3_16021 59e93cd8edc7ced332118dd21d888bc2 249 SUPERFAMILY SSF53639 13 214 1.22E-61 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_16021 59e93cd8edc7ced332118dd21d888bc2 249 SMART SM01007 18 198 1.3E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_16021 59e93cd8edc7ced332118dd21d888bc2 249 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 198 2.3E-46 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_16021 59e93cd8edc7ced332118dd21d888bc2 249 Gene3D G3DSA:3.40.225.10 3 249 2.1E-76 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 SMART SM00846 3 150 1.6E-93 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 SUPERFAMILY SSF55347 149 312 5.3E-76 T 14-10-2018 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 Gene3D G3DSA:3.30.360.10 149 314 2.9E-152 T 14-10-2018 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.8E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 SUPERFAMILY SSF51735 3 166 3.58E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.1E-67 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 Gene3D G3DSA:3.40.50.720 4 326 2.9E-152 T 14-10-2018 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PIRSF PIRSF000149 1 331 9.7E-132 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_11155 014a46c005ba2e72f814ec3fd1f01a12 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_19966 19d4dda1fd18d2acf92de90009e80ea4 142 SUPERFAMILY SSF54637 1 137 9.84E-30 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_19966 19d4dda1fd18d2acf92de90009e80ea4 142 Gene3D G3DSA:3.10.129.10 1 142 2.5E-57 T 14-10-2018 VEJY3_19966 19d4dda1fd18d2acf92de90009e80ea4 142 Pfam PF03061 Thioesterase superfamily 52 128 9.5E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_19086 be1c078a0534631b0f43f0444bf08df2 410 Gene3D G3DSA:1.20.1250.20 3 401 4.3E-58 T 14-10-2018 VEJY3_19086 be1c078a0534631b0f43f0444bf08df2 410 Pfam PF07690 Major Facilitator Superfamily 15 295 3.9E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_19086 be1c078a0534631b0f43f0444bf08df2 410 SUPERFAMILY SSF103473 9 401 7.32E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_03165 a274907b7a0d61ecbb34394cd0ba825e 294 Gene3D G3DSA:1.10.600.10 1 294 1.1E-112 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEJY3_03165 a274907b7a0d61ecbb34394cd0ba825e 294 Pfam PF00348 Polyprenyl synthetase 32 270 1.9E-57 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VEJY3_03165 a274907b7a0d61ecbb34394cd0ba825e 294 SUPERFAMILY SSF48576 3 285 4.16E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEJY3_03165 a274907b7a0d61ecbb34394cd0ba825e 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEJY3_03165 a274907b7a0d61ecbb34394cd0ba825e 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEJY3_16406 1961ca43e22cad944358d03f7aebbd16 364 Pfam PF12060 Domain of unknown function (DUF3541) 31 253 4.4E-111 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 VEJY3_08360 f436fc966180f31edde69b0978aea558 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.7E-18 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_08360 f436fc966180f31edde69b0978aea558 138 SUPERFAMILY SSF54593 3 129 2.15E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_08360 f436fc966180f31edde69b0978aea558 138 Gene3D G3DSA:3.10.180.10 2 133 7.0E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_10185 75766789c2d0204761ffab83fb3d6600 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 8.2E-30 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VEJY3_10185 75766789c2d0204761ffab83fb3d6600 417 Gene3D G3DSA:3.40.50.720 4 398 2.4E-143 T 14-10-2018 VEJY3_10185 75766789c2d0204761ffab83fb3d6600 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 8.4E-33 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VEJY3_10185 75766789c2d0204761ffab83fb3d6600 417 Gene3D G3DSA:3.30.360.10 159 355 2.4E-143 T 14-10-2018 VEJY3_10185 75766789c2d0204761ffab83fb3d6600 417 SUPERFAMILY SSF51735 3 179 1.14E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19471 36f3e242ba5a20f0391c4835a322df83 334 PIRSF PIRSF017617 1 334 1.8E-135 T 14-10-2018 IPR023603 Threonine aldolase VEJY3_19471 36f3e242ba5a20f0391c4835a322df83 334 SUPERFAMILY SSF53383 1 332 1.63E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_19471 36f3e242ba5a20f0391c4835a322df83 334 Pfam PF01212 Beta-eliminating lyase 2 283 2.9E-101 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VEJY3_19471 36f3e242ba5a20f0391c4835a322df83 334 Gene3D G3DSA:3.40.640.10 1 242 1.8E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_19471 36f3e242ba5a20f0391c4835a322df83 334 Gene3D G3DSA:3.90.1150.10 244 334 2.2E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_17701 627a6e01c67e8cb770bca30d3f8d78a6 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 7.4E-27 T 14-10-2018 VEJY3_17701 627a6e01c67e8cb770bca30d3f8d78a6 200 SUPERFAMILY SSF56784 8 193 2.97E-43 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_17701 627a6e01c67e8cb770bca30d3f8d78a6 200 Gene3D G3DSA:3.40.50.1000 10 190 2.3E-42 T 14-10-2018 IPR023214 HAD superfamily VEJY3_17701 627a6e01c67e8cb770bca30d3f8d78a6 200 Gene3D G3DSA:1.10.150.240 22 92 2.3E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 Gene3D G3DSA:3.40.50.720 103 298 3.4E-132 T 14-10-2018 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.0E-49 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 9.9E-33 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 Gene3D G3DSA:3.40.50.720 4 317 3.4E-132 T 14-10-2018 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 SUPERFAMILY SSF52283 1 136 2.76E-41 T 14-10-2018 VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 SUPERFAMILY SSF51735 103 299 8.0E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16251 11543b44522728fb91c7b7e56086c06a 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEJY3_12550 e2c777f73fc385d9711e1d31edc69a4d 69 Pfam PF06568 Domain of unknown function (DUF1127) 25 54 6.2E-9 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 VEJY3_14525 36c01c554697c159b174b02b54a29472 302 Gene3D G3DSA:3.30.70.1350 207 290 1.1E-29 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VEJY3_14525 36c01c554697c159b174b02b54a29472 302 Gene3D G3DSA:1.20.1510.10 8 206 3.3E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_14525 36c01c554697c159b174b02b54a29472 302 SUPERFAMILY SSF161111 8 207 4.71E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_14525 36c01c554697c159b174b02b54a29472 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 8.8E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VEJY3_14525 36c01c554697c159b174b02b54a29472 302 SUPERFAMILY SSF160240 210 288 4.05E-23 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VEJY3_14525 36c01c554697c159b174b02b54a29472 302 Pfam PF01545 Cation efflux family 15 206 3.0E-42 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEJY3_01040 32d96f7bcdc46befe7b53aa42396aad6 379 SUPERFAMILY SSF53756 60 376 4.6E-28 T 14-10-2018 VEJY3_01040 32d96f7bcdc46befe7b53aa42396aad6 379 Pfam PF13439 Glycosyltransferase Family 4 69 175 1.8E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_01040 32d96f7bcdc46befe7b53aa42396aad6 379 Gene3D G3DSA:3.40.50.2000 31 185 4.3E-10 T 14-10-2018 VEJY3_01040 32d96f7bcdc46befe7b53aa42396aad6 379 Gene3D G3DSA:3.40.50.2000 186 377 3.3E-9 T 14-10-2018 VEJY3_11050 da3011e9066a357b24b3f237e4cb993b 602 PIRSF PIRSF004950 6 600 3.8E-250 T 14-10-2018 IPR012159 Inner membrane protein YejM VEJY3_11050 da3011e9066a357b24b3f237e4cb993b 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 2.1E-98 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VEJY3_11050 da3011e9066a357b24b3f237e4cb993b 602 SUPERFAMILY SSF53649 257 585 1.45E-50 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_11050 da3011e9066a357b24b3f237e4cb993b 602 Pfam PF00884 Sulfatase 274 515 1.3E-21 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_11050 da3011e9066a357b24b3f237e4cb993b 602 Gene3D G3DSA:3.40.720.10 248 548 6.9E-38 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_06355 31ae88adb7b437d62b8635aa8d3ba2f4 205 SMART SM00855 5 154 1.6E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEJY3_06355 31ae88adb7b437d62b8635aa8d3ba2f4 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 1.1E-36 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEJY3_06355 31ae88adb7b437d62b8635aa8d3ba2f4 205 PIRSF PIRSF000709 2 184 3.8E-7 T 14-10-2018 VEJY3_06355 31ae88adb7b437d62b8635aa8d3ba2f4 205 Gene3D G3DSA:3.40.50.1240 1 205 2.0E-57 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_06355 31ae88adb7b437d62b8635aa8d3ba2f4 205 SUPERFAMILY SSF53254 1 189 4.71E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_05515 4dd65f722bb0cf4dedaa84715b3e37f4 205 Gene3D G3DSA:1.10.3890.10 1 205 1.2E-77 T 14-10-2018 IPR035932 HflD-like superfamily VEJY3_05515 4dd65f722bb0cf4dedaa84715b3e37f4 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.0E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VEJY3_05515 4dd65f722bb0cf4dedaa84715b3e37f4 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 7.0E-101 T 14-10-2018 VEJY3_05515 4dd65f722bb0cf4dedaa84715b3e37f4 205 SUPERFAMILY SSF101322 2 204 7.45E-80 T 14-10-2018 IPR035932 HflD-like superfamily VEJY3_05515 4dd65f722bb0cf4dedaa84715b3e37f4 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.843 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VEJY3_17931 94890b3a2cb60416023e9a7377b946bf 440 Gene3D G3DSA:1.20.1250.20 17 427 1.4E-76 T 14-10-2018 VEJY3_17931 94890b3a2cb60416023e9a7377b946bf 440 SUPERFAMILY SSF103473 8 430 2.62E-85 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_17931 94890b3a2cb60416023e9a7377b946bf 440 Pfam PF07690 Major Facilitator Superfamily 28 314 2.6E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_17931 94890b3a2cb60416023e9a7377b946bf 440 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEJY3_03065 703935f94d430f96149c49b6aa941933 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 3.4E-35 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 VEJY3_08275 59b368179db841b94adfed89961ff5db 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 3.3E-59 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEJY3_08275 59b368179db841b94adfed89961ff5db 288 Gene3D G3DSA:3.60.110.10 1 286 1.5E-107 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_08275 59b368179db841b94adfed89961ff5db 288 SUPERFAMILY SSF56317 4 281 8.37E-84 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEJY3_06045 db461db3497e602e823c2bb2bffafe0b 219 Gene3D G3DSA:2.60.120.620 1 216 2.2E-53 T 14-10-2018 VEJY3_06045 db461db3497e602e823c2bb2bffafe0b 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 2.0E-54 T 14-10-2018 IPR018724 2OG-Fe dioxygenase VEJY3_12195 a126be2329d28b4c3f8a609c24493f99 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.7E-30 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 VEJY3_12195 a126be2329d28b4c3f8a609c24493f99 77 Gene3D G3DSA:1.10.10.1130 1 77 1.1E-30 T 14-10-2018 VEJY3_14210 1594b9d3345775ab7cdc140461fbcf66 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.372 T 14-10-2018 IPR007236 SlyX VEJY3_14210 1594b9d3345775ab7cdc140461fbcf66 75 Pfam PF04102 SlyX 9 75 3.0E-23 T 14-10-2018 IPR007236 SlyX VEJY3_14210 1594b9d3345775ab7cdc140461fbcf66 75 Gene3D G3DSA:1.20.5.300 1 52 1.8E-6 T 14-10-2018 VEJY3_19596 f516a6f89fe673149bb960e358c73a00 249 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.1E-5 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 SUPERFAMILY SSF46689 459 507 6.27E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 SMART SM00382 214 358 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Pfam PF00158 Sigma-54 interaction domain 194 361 1.4E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 SUPERFAMILY SSF52540 193 429 5.61E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Gene3D G3DSA:3.40.50.300 180 364 3.6E-64 T 14-10-2018 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Gene3D G3DSA:1.10.8.60 365 430 2.3E-15 T 14-10-2018 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Pfam PF02954 Bacterial regulatory protein, Fis family 470 500 2.9E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Gene3D G3DSA:3.30.450.40 7 175 3.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 SUPERFAMILY SSF55781 7 163 1.98E-17 T 14-10-2018 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 Gene3D G3DSA:1.10.10.60 448 509 7.2E-10 T 14-10-2018 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 5.2E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 5.2E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEJY3_05790 a8921ee75a1603fffaded609e04ff1d7 509 SMART SM00065 21 170 2.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 Gene3D G3DSA:3.90.25.10 194 329 4.6E-144 T 14-10-2018 VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.8E-58 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 SUPERFAMILY SSF51735 2 335 8.98E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 Gene3D G3DSA:3.40.50.720 3 274 4.6E-144 T 14-10-2018 VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.7E-6 T 14-10-2018 VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.7E-6 T 14-10-2018 VEJY3_22631 510f54664c16ecb79107970ddbc8c4a4 336 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 5.7E-6 T 14-10-2018 VEJY3_03695 23b7ae3529470bec3b4d0fcacafd222f 133 SMART SM00116 83 130 4.2E-4 T 14-10-2018 IPR000644 CBS domain VEJY3_03695 23b7ae3529470bec3b4d0fcacafd222f 133 SMART SM00116 16 65 27.0 T 14-10-2018 IPR000644 CBS domain VEJY3_03695 23b7ae3529470bec3b4d0fcacafd222f 133 Pfam PF00571 CBS domain 78 125 1.1E-9 T 14-10-2018 IPR000644 CBS domain VEJY3_03695 23b7ae3529470bec3b4d0fcacafd222f 133 SUPERFAMILY SSF54631 7 126 5.81E-24 T 14-10-2018 VEJY3_03695 23b7ae3529470bec3b4d0fcacafd222f 133 Gene3D G3DSA:3.10.580.10 1 132 3.2E-26 T 14-10-2018 VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 Pfam PF00698 Acyl transferase domain 3 279 3.9E-16 T 14-10-2018 IPR014043 Acyl transferase VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 SUPERFAMILY SSF55048 118 187 1.03E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 2 294 6.2E-16 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 PIRSF PIRSF000446 1 300 1.2E-54 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 Gene3D G3DSA:3.40.366.10 2 275 4.7E-57 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 SUPERFAMILY SSF52151 2 291 6.02E-40 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_05345 abd04264baa68a9af893fa3ad46b8862 303 Gene3D G3DSA:3.30.70.250 115 187 4.7E-57 T 14-10-2018 VEJY3_02655 5d2b48f976c961eddc1685342bdd3370 201 Gene3D G3DSA:3.40.30.10 1 197 1.9E-71 T 14-10-2018 VEJY3_02655 5d2b48f976c961eddc1685342bdd3370 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_02655 5d2b48f976c961eddc1685342bdd3370 201 PIRSF PIRSF000239 1 199 2.6E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_02655 5d2b48f976c961eddc1685342bdd3370 201 SUPERFAMILY SSF52833 1 194 1.43E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_02655 5d2b48f976c961eddc1685342bdd3370 201 Pfam PF00578 AhpC/TSA family 4 139 1.4E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEJY3_14380 2bf9c203e22775579b4f3b6e505ddae1 375 SUPERFAMILY SSF54862 165 319 1.0E-19 T 14-10-2018 VEJY3_14380 2bf9c203e22775579b4f3b6e505ddae1 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.652 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VEJY3_14380 2bf9c203e22775579b4f3b6e505ddae1 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.0E-19 T 14-10-2018 VEJY3_14380 2bf9c203e22775579b4f3b6e505ddae1 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.5E-22 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VEJY3_14380 2bf9c203e22775579b4f3b6e505ddae1 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_19246 cd218a4ea539a21f7d78a297f2481899 129 SUPERFAMILY SSF101386 3 102 2.24E-14 T 14-10-2018 VEJY3_19246 cd218a4ea539a21f7d78a297f2481899 129 Gene3D G3DSA:1.10.287.1080 8 125 5.4E-14 T 14-10-2018 VEJY3_19246 cd218a4ea539a21f7d78a297f2481899 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.6E-18 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEJY3_15495 070dcbb06dbd0f2e8f78809a54afe795 257 PIRSF PIRSF009320 2 79 1.4E-13 T 14-10-2018 VEJY3_15495 070dcbb06dbd0f2e8f78809a54afe795 257 PIRSF PIRSF009320 87 251 6.3E-9 T 14-10-2018 VEJY3_15495 070dcbb06dbd0f2e8f78809a54afe795 257 Pfam PF13614 AAA domain 2 178 2.9E-62 T 14-10-2018 IPR025669 AAA domain VEJY3_15495 070dcbb06dbd0f2e8f78809a54afe795 257 SUPERFAMILY SSF52540 2 254 4.28E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15495 070dcbb06dbd0f2e8f78809a54afe795 257 Gene3D G3DSA:3.40.50.300 1 255 1.7E-76 T 14-10-2018 VEJY3_17291 c9a8daf698a43d877dc15b4e3a0438aa 142 Gene3D G3DSA:3.10.180.10 5 141 5.1E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_17291 c9a8daf698a43d877dc15b4e3a0438aa 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 42 125 7.1E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_17291 c9a8daf698a43d877dc15b4e3a0438aa 142 SUPERFAMILY SSF54593 3 129 3.47E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_13280 02efcaff85d55d8a3807d0e55dd6f3e7 156 PIRSF PIRSF004923 1 156 8.2E-38 T 14-10-2018 IPR026268 Protein RseC VEJY3_13280 02efcaff85d55d8a3807d0e55dd6f3e7 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 20 149 5.9E-30 T 14-10-2018 VEJY3_21036 a120fe27cb0c05ab95d355db93b5fc4b 114 PIRSF PIRSF020632 3 112 1.4E-59 T 14-10-2018 IPR014510 Tellurite resistance predicted, YeaR VEJY3_21036 a120fe27cb0c05ab95d355db93b5fc4b 114 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 2.1E-26 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 VEJY3_21036 a120fe27cb0c05ab95d355db93b5fc4b 114 Gene3D G3DSA:2.60.120.10 1 114 1.4E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_21036 a120fe27cb0c05ab95d355db93b5fc4b 114 SUPERFAMILY SSF51197 4 101 6.04E-33 T 14-10-2018 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 376 559 7.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 SUPERFAMILY SSF58104 284 593 3.14E-68 T 14-10-2018 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 SMART SM00304 262 316 3.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 SMART SM00304 512 568 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 SMART SM00283 331 592 5.4E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_09400 33e908b87fa952f0b8ea4571e2ab4bc1 594 Gene3D G3DSA:1.10.287.950 263 594 1.8E-67 T 14-10-2018 VEJY3_05195 0a279c57dd44c83151e055be717c5f29 687 Gene3D G3DSA:3.40.50.300 1 314 1.2E-23 T 14-10-2018 VEJY3_05195 0a279c57dd44c83151e055be717c5f29 687 SUPERFAMILY SSF52540 1 303 1.53E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_05195 0a279c57dd44c83151e055be717c5f29 687 Pfam PF13476 AAA domain 5 239 3.0E-14 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VEJY3_19216 a6b5bec4914fdb3418203ce5e3e92de9 230 Pfam PF00072 Response regulator receiver domain 4 115 2.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19216 a6b5bec4914fdb3418203ce5e3e92de9 230 PIRSF PIRSF006171 1 227 1.4E-70 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VEJY3_19216 a6b5bec4914fdb3418203ce5e3e92de9 230 Gene3D G3DSA:3.40.50.12740 2 209 4.1E-24 T 14-10-2018 VEJY3_19216 a6b5bec4914fdb3418203ce5e3e92de9 230 SMART SM00448 2 115 8.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19216 a6b5bec4914fdb3418203ce5e3e92de9 230 SUPERFAMILY SSF52172 1 127 6.83E-29 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_23366 79ef69ceb1e705bcc16b404b84e99796 271 Pfam PF13411 MerR HTH family regulatory protein 10 76 7.2E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_23366 79ef69ceb1e705bcc16b404b84e99796 271 Gene3D G3DSA:1.10.1660.10 4 76 8.2E-25 T 14-10-2018 VEJY3_23366 79ef69ceb1e705bcc16b404b84e99796 271 SUPERFAMILY SSF46955 10 85 9.61E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VEJY3_23366 79ef69ceb1e705bcc16b404b84e99796 271 SMART SM00422 10 79 1.1E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEJY3_18281 e915583ae15418dfac64905c4cfa42d7 215 Gene3D G3DSA:3.40.225.10 7 213 1.9E-61 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_18281 e915583ae15418dfac64905c4cfa42d7 215 SMART SM01007 13 192 1.0E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_18281 e915583ae15418dfac64905c4cfa42d7 215 SUPERFAMILY SSF53639 5 210 7.26E-63 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_18281 e915583ae15418dfac64905c4cfa42d7 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 191 1.5E-48 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_12630 2afed19f222ac9ac63068013592b64d3 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 1.0E-37 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12630 2afed19f222ac9ac63068013592b64d3 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 7.0E-6 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12630 2afed19f222ac9ac63068013592b64d3 132 SUPERFAMILY SSF102220 31 131 5.89E-31 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12630 2afed19f222ac9ac63068013592b64d3 132 Gene3D G3DSA:3.40.50.10220 35 132 9.2E-30 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_12630 2afed19f222ac9ac63068013592b64d3 132 PIRSF PIRSF029225 2 132 2.4E-44 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 34.058 T 14-10-2018 IPR009662 Malonate decarboxylase delta subunit VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 Pfam PF01039 Carboxyl transferase domain 117 330 6.6E-12 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 87 6.0E-16 T 14-10-2018 IPR009662 Malonate decarboxylase delta subunit VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 94 1.7E-20 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 Gene3D G3DSA:3.90.226.10 85 346 1.3E-43 T 14-10-2018 VEJY3_05330 e5eca5daf620ae70d426babc89a2ac4e 384 SUPERFAMILY SSF52096 110 329 2.69E-32 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_04670 db83f72edc23faa34ba84338f62b55b7 181 Gene3D G3DSA:1.20.1270.340 1 98 1.3E-15 T 14-10-2018 IPR038338 PriB/PriC superfamily VEJY3_04670 db83f72edc23faa34ba84338f62b55b7 181 Pfam PF07445 Primosomal replication protein priC 5 178 1.3E-50 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC VEJY3_22736 c984de6bfba5f94ce9d924f578f8728b 296 SUPERFAMILY SSF103481 178 279 7.72E-5 T 14-10-2018 VEJY3_22736 c984de6bfba5f94ce9d924f578f8728b 296 Pfam PF00892 EamA-like transporter family 148 273 3.6E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_22736 c984de6bfba5f94ce9d924f578f8728b 296 Pfam PF00892 EamA-like transporter family 6 138 9.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_22736 c984de6bfba5f94ce9d924f578f8728b 296 SUPERFAMILY SSF103481 45 141 2.75E-8 T 14-10-2018 VEJY3_21011 843602bfae64d00d6a5a5d8f9d07ea2e 457 Pfam PF07690 Major Facilitator Superfamily 42 369 5.3E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_21011 843602bfae64d00d6a5a5d8f9d07ea2e 457 Gene3D G3DSA:1.20.1250.20 226 455 1.2E-70 T 14-10-2018 VEJY3_21011 843602bfae64d00d6a5a5d8f9d07ea2e 457 SUPERFAMILY SSF103473 32 447 2.09E-40 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_21011 843602bfae64d00d6a5a5d8f9d07ea2e 457 Gene3D G3DSA:1.20.1250.20 2 225 4.6E-75 T 14-10-2018 VEJY3_18311 b55e67ab5de52400a4e6d3362f94350c 124 Pfam PF02082 Transcriptional regulator 1 58 4.1E-14 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VEJY3_18311 b55e67ab5de52400a4e6d3362f94350c 124 SUPERFAMILY SSF46785 2 112 9.85E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18311 b55e67ab5de52400a4e6d3362f94350c 124 Gene3D G3DSA:1.10.10.10 1 123 9.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 6.4E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 SUPERFAMILY SSF51344 5 87 2.88E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 6.1E-12 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 Gene3D G3DSA:2.60.15.10 4 91 1.9E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.795 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 Gene3D G3DSA:1.20.5.440 92 135 1.8E-19 T 14-10-2018 VEJY3_15445 6fd3f0fcb8b5960c552d0a392fe482aa 140 SUPERFAMILY SSF46604 89 138 9.68E-15 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 Gene3D G3DSA:3.40.50.1000 5 218 8.2E-64 T 14-10-2018 IPR023214 HAD superfamily VEJY3_16506 db6035b19a48f82ee176349013706e43 224 Gene3D G3DSA:1.10.150.240 16 95 8.2E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_16506 db6035b19a48f82ee176349013706e43 224 SUPERFAMILY SSF56784 2 222 3.4E-49 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_16506 db6035b19a48f82ee176349013706e43 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 6.1E-23 T 14-10-2018 VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 Pfam PF06719 AraC-type transcriptional regulator N-terminus 32 182 6.6E-50 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 SUPERFAMILY SSF46689 247 294 5.82E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 Pfam PF12833 Helix-turn-helix domain 217 292 2.2E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 SMART SM00342 211 294 9.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 Gene3D G3DSA:1.10.10.60 194 298 1.7E-23 T 14-10-2018 VEJY3_21421 226c331ee9c6a427f8ec5127d0653173 303 SUPERFAMILY SSF46689 194 245 2.27E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17076 af93208e259bdead6e0ef2262e04523d 303 Gene3D G3DSA:3.40.50.720 117 264 1.2E-32 T 14-10-2018 VEJY3_17076 af93208e259bdead6e0ef2262e04523d 303 Pfam PF02625 XdhC and CoxI family 25 81 1.1E-13 T 14-10-2018 IPR003777 XdhC- CoxI VEJY3_17076 af93208e259bdead6e0ef2262e04523d 303 SUPERFAMILY SSF51735 117 208 5.76E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17076 af93208e259bdead6e0ef2262e04523d 303 Pfam PF13478 XdhC Rossmann domain 118 260 9.1E-33 T 14-10-2018 IPR027051 XdhC Rossmann domain VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PIRSF PIRSF500210 1 333 8.1E-129 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 SUPERFAMILY SSF56655 3 328 1.2E-113 T 14-10-2018 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 43.127 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PIRSF PIRSF000904 1 334 5.1E-126 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 1.0E-74 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 Gene3D G3DSA:3.30.540.10 1 195 2.4E-76 T 14-10-2018 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 Gene3D G3DSA:3.40.190.80 197 334 3.4E-60 T 14-10-2018 VEJY3_01540 7b05a1bf4c8ed99bf37091a9d28f658a 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 1.9E-75 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEJY3_07605 e414e110307397327837129429710eb5 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 2.5E-26 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 VEJY3_13140 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VEJY3_13140 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEJY3_13140 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VEJY3_13140 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEJY3_13140 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEJY3_15866 b041080b72606b71197f688bd31e4d95 285 SMART SM00382 30 208 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_15866 b041080b72606b71197f688bd31e4d95 285 Gene3D G3DSA:3.40.50.300 1 247 5.4E-46 T 14-10-2018 VEJY3_15866 b041080b72606b71197f688bd31e4d95 285 SUPERFAMILY SSF52540 5 222 3.74E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_15866 b041080b72606b71197f688bd31e4d95 285 Pfam PF00005 ABC transporter 21 158 5.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_14980 68b2f7cd83695e1127a5b5f302b5e290 405 Pfam PF07690 Major Facilitator Superfamily 18 340 5.0E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_14980 68b2f7cd83695e1127a5b5f302b5e290 405 Gene3D G3DSA:1.20.1250.20 8 201 5.1E-15 T 14-10-2018 VEJY3_14980 68b2f7cd83695e1127a5b5f302b5e290 405 Gene3D G3DSA:1.20.1250.20 207 403 8.8E-11 T 14-10-2018 VEJY3_14980 68b2f7cd83695e1127a5b5f302b5e290 405 SUPERFAMILY SSF103473 9 399 1.31E-33 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_14035 d23e6180402fb1d9a8d3ec7996e02ed2 497 Gene3D G3DSA:3.40.50.300 8 158 6.8E-7 T 14-10-2018 VEJY3_14035 d23e6180402fb1d9a8d3ec7996e02ed2 497 Pfam PF05036 Sporulation related domain 410 483 7.9E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_14035 d23e6180402fb1d9a8d3ec7996e02ed2 497 SUPERFAMILY SSF52540 13 226 1.36E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14035 d23e6180402fb1d9a8d3ec7996e02ed2 497 Pfam PF13401 AAA domain 27 128 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_14035 d23e6180402fb1d9a8d3ec7996e02ed2 497 Gene3D G3DSA:3.30.70.1070 397 494 2.8E-23 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_03665 e447622262794692deee2674fb23171a 284 Gene3D G3DSA:1.25.40.10 197 284 3.6E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03665 e447622262794692deee2674fb23171a 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.8E-28 T 14-10-2018 VEJY3_03665 e447622262794692deee2674fb23171a 284 SUPERFAMILY SSF52833 3 113 5.13E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_03665 e447622262794692deee2674fb23171a 284 Pfam PF00085 Thioredoxin 6 109 9.6E-16 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEJY3_03665 e447622262794692deee2674fb23171a 284 Gene3D G3DSA:3.40.30.10 2 111 2.0E-22 T 14-10-2018 VEJY3_03665 e447622262794692deee2674fb23171a 284 Gene3D G3DSA:1.25.40.10 112 196 8.7E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_03665 e447622262794692deee2674fb23171a 284 Pfam PF14559 Tetratricopeptide repeat 124 190 6.4E-11 T 14-10-2018 VEJY3_20836 5b5bbb10708fa080d96af4e5fe5d50d2 811 SUPERFAMILY SSF52540 105 299 1.06E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20836 5b5bbb10708fa080d96af4e5fe5d50d2 811 Gene3D G3DSA:3.40.50.300 186 341 3.6E-8 T 14-10-2018 VEJY3_08295 6683b784d1b8b3deeaca28403833d236 248 SUPERFAMILY SSF52317 5 246 1.99E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_08295 6683b784d1b8b3deeaca28403833d236 248 Gene3D G3DSA:3.40.50.880 3 248 5.1E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_08295 6683b784d1b8b3deeaca28403833d236 248 Pfam PF07722 Peptidase C26 7 226 1.4E-67 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 Pfam PF02254 TrkA-N domain 402 512 1.6E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.976 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 Gene3D G3DSA:1.20.1530.20 4 384 3.8E-82 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 SUPERFAMILY SSF51735 401 528 1.54E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 Gene3D G3DSA:3.40.50.720 399 559 1.9E-35 T 14-10-2018 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 371 4.9E-66 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_14230 2d2bea41892b37323be65d0eaff241aa 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 4.0E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEJY3_11870 0853fea96e33534cadb26f92a3186ecd 78 SUPERFAMILY SSF64307 2 72 4.06E-8 T 14-10-2018 IPR036868 TusA-like domain superfamily VEJY3_11870 0853fea96e33534cadb26f92a3186ecd 78 Gene3D G3DSA:3.30.110.40 1 74 1.6E-5 T 14-10-2018 IPR036868 TusA-like domain superfamily VEJY3_11870 0853fea96e33534cadb26f92a3186ecd 78 Pfam PF01206 Sulfurtransferase TusA 3 72 1.3E-10 T 14-10-2018 IPR001455 TusA-like domain VEJY3_24001 38db4ae5649d7960084238584c0e0790 523 Pfam PF02435 Levansucrase/Invertase 49 497 2.7E-138 T 14-10-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 VEJY3_24001 38db4ae5649d7960084238584c0e0790 523 SUPERFAMILY SSF75005 43 495 1.45E-65 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_24001 38db4ae5649d7960084238584c0e0790 523 Gene3D G3DSA:2.115.10.20 27 509 1.6E-205 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEJY3_02925 774ed4a6be212718146928382489862c 573 Gene3D G3DSA:1.10.4160.10 7 486 1.9E-16 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VEJY3_08810 759a61f060c37b5d7122313d5c85a6b7 135 Pfam PF02566 OsmC-like protein 30 126 2.1E-14 T 14-10-2018 IPR003718 OsmC/Ohr family VEJY3_08810 759a61f060c37b5d7122313d5c85a6b7 135 SUPERFAMILY SSF82784 1 130 6.28E-31 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VEJY3_08810 759a61f060c37b5d7122313d5c85a6b7 135 Gene3D G3DSA:3.30.300.20 1 132 6.2E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 Gene3D G3DSA:3.30.70.260 125 196 1.6E-79 T 14-10-2018 VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 SUPERFAMILY SSF75445 127 198 3.4E-24 T 14-10-2018 VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 Gene3D G3DSA:3.40.50.1360 7 207 1.6E-79 T 14-10-2018 VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 SUPERFAMILY SSF100950 1 146 2.61E-47 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.7E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.863 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEJY3_13350 4fff300fb4af65c52f1b292eb44f5204 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.1E-69 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 5.8E-23 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 SUPERFAMILY SSF52540 6 241 3.15E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 194.377 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 SUPERFAMILY SSF52317 255 447 9.02E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 436 3.8E-57 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 Gene3D G3DSA:3.40.50.880 255 431 9.4E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_19731 c50e2a4b3b3cc0ef4145564eb70e721a 483 Gene3D G3DSA:3.40.50.300 5 247 2.8E-57 T 14-10-2018 VEJY3_21841 037b9d05b184106acc119ab634afc017 358 SUPERFAMILY SSF50952 19 350 1.44E-38 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VEJY3_21841 037b9d05b184106acc119ab634afc017 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 5.1E-109 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase VEJY3_21841 037b9d05b184106acc119ab634afc017 358 Gene3D G3DSA:2.120.10.30 15 358 1.6E-99 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.4E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.4E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.4E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 SUPERFAMILY SSF54292 5 107 1.94E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.8E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_02750 fbac1db66e72e859a47d5e9a4daaa537 112 Gene3D G3DSA:3.10.20.30 1 112 3.1E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_22216 00b25dddcb4cd9286e503bfcdbf7c812 378 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 369 4.5E-95 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_22216 00b25dddcb4cd9286e503bfcdbf7c812 378 Gene3D G3DSA:1.20.1090.10 178 376 1.9E-58 T 14-10-2018 VEJY3_22216 00b25dddcb4cd9286e503bfcdbf7c812 378 SUPERFAMILY SSF56796 23 375 5.23E-95 T 14-10-2018 VEJY3_22216 00b25dddcb4cd9286e503bfcdbf7c812 378 Gene3D G3DSA:3.40.50.1970 6 177 7.0E-38 T 14-10-2018 VEJY3_05420 d17b1a99944177bfe9bcf0f26f94eb8d 208 SUPERFAMILY SSF89392 30 207 4.32E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEJY3_05420 d17b1a99944177bfe9bcf0f26f94eb8d 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.706 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VEJY3_05420 d17b1a99944177bfe9bcf0f26f94eb8d 208 Gene3D G3DSA:2.50.20.10 26 207 3.7E-47 T 14-10-2018 VEJY3_05420 d17b1a99944177bfe9bcf0f26f94eb8d 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 196 4.4E-55 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 6.4E-123 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.2E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 Gene3D G3DSA:3.30.70.260 1 80 7.7E-15 T 14-10-2018 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 SUPERFAMILY SSF53328 82 276 3.53E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 Pfam PF01842 ACT domain 5 66 6.2E-7 T 14-10-2018 IPR002912 ACT domain VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 Pfam PF00551 Formyl transferase 82 259 5.8E-49 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 SUPERFAMILY SSF55021 4 55 2.62E-8 T 14-10-2018 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 PIRSF PIRSF036480 1 277 2.5E-112 T 14-10-2018 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 Gene3D G3DSA:3.40.50.170 81 277 4.2E-67 T 14-10-2018 VEJY3_03935 f989df3f2f3ecbd16c541caf43dd8052 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.078 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEJY3_07130 6314a7ec5f75585eb6e9d95ee2703a48 240 Pfam PF04116 Fatty acid hydroxylase superfamily 56 192 1.1E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEJY3_21051 852964291235957207fb3e071b69bf9a 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Gene3D G3DSA:3.40.50.300 175 358 3.5E-63 T 14-10-2018 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Pfam PF01590 GAF domain 22 154 1.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Pfam PF00158 Sigma-54 interaction domain 188 354 2.4E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 SUPERFAMILY SSF55781 7 166 3.05E-16 T 14-10-2018 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Gene3D G3DSA:1.10.10.60 460 510 1.0E-9 T 14-10-2018 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 SUPERFAMILY SSF52540 187 422 1.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Gene3D G3DSA:1.10.8.60 359 425 1.9E-20 T 14-10-2018 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 Gene3D G3DSA:3.30.450.40 4 172 1.2E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_21051 852964291235957207fb3e071b69bf9a 510 SUPERFAMILY SSF46689 401 509 2.33E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_21051 852964291235957207fb3e071b69bf9a 510 SMART SM00382 208 351 6.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21051 852964291235957207fb3e071b69bf9a 510 SMART SM00065 20 168 1.0E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 Gene3D G3DSA:3.40.190.10 175 273 7.0E-47 T 14-10-2018 VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 Gene3D G3DSA:3.40.190.10 96 297 7.0E-47 T 14-10-2018 VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 SUPERFAMILY SSF53850 94 300 1.01E-35 T 14-10-2018 VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 6.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 Gene3D G3DSA:1.10.10.10 4 91 3.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 Pfam PF03466 LysR substrate binding domain 97 300 1.2E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_12440 643354299e1103076b88c8e9b43df2c2 305 SUPERFAMILY SSF46785 7 84 6.46E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 Gene3D G3DSA:1.10.10.10 4 89 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 Gene3D G3DSA:3.40.190.10 164 262 2.5E-58 T 14-10-2018 VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 SUPERFAMILY SSF46785 5 112 1.06E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 Pfam PF03466 LysR substrate binding domain 90 290 1.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 Gene3D G3DSA:3.40.190.10 92 287 2.5E-58 T 14-10-2018 VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 5.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_09075 bb8cfff81012a111c8abe990070c1027 294 SUPERFAMILY SSF53850 91 291 2.17E-39 T 14-10-2018 VEJY3_05530 1088170f1d9221e83247d17ce7a46388 434 Pfam PF00294 pfkB family carbohydrate kinase 77 291 9.7E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_05530 1088170f1d9221e83247d17ce7a46388 434 SUPERFAMILY SSF53613 31 417 2.96E-44 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 SMART SM01004 10 334 3.2E-245 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 Gene3D G3DSA:3.20.20.70 2 338 1.7E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 1.7E-140 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 7.9E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 SUPERFAMILY SSF51569 8 336 3.96E-144 T 14-10-2018 VEJY3_00475 dd2ec70745e27a6f3ecb83008c50bd0e 354 PIRSF PIRSF001415 3 337 7.2E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEJY3_00220 a17555d36f1e4656bb42790a2556700c 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.1E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_00220 a17555d36f1e4656bb42790a2556700c 325 SUPERFAMILY SSF161098 89 302 1.64E-17 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00220 a17555d36f1e4656bb42790a2556700c 325 Gene3D G3DSA:1.10.3720.10 84 314 7.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_21571 17be1d105394f3994e2234824cbf96f3 192 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 161 4.9E-23 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_00170 7334a47cea0905866f99996c4bad525b 83 Pfam PF04380 Membrane fusogenic activity 1 78 4.9E-28 T 14-10-2018 IPR007475 Membrane fusogenic activity VEJY3_08865 1bfbecba674e7d3317d9099a570a8cd1 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 7.0E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 SUPERFAMILY SSF81338 7 253 3.92E-75 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 Gene3D G3DSA:1.20.1080.10 2 257 1.1E-96 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 Pfam PF00230 Major intrinsic protein 5 248 5.1E-64 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 6.7E-66 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 182 204 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 232 252 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.6E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEJY3_08500 fc00ed1d0fbe535a923897a509f7e774 273 ProSitePatterns PS00221 MIP family signature. 64 72 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 8.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 8.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 8.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 8.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 SUPERFAMILY SSF53474 5 253 1.61E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 Gene3D G3DSA:3.40.50.1820 3 254 1.4E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03805 e853732d8a37caac51a06c2cfcd9a025 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 7.5E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_08950 074aefc3afa471e65f033c028bbac6af 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 4.0E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_08950 074aefc3afa471e65f033c028bbac6af 347 Gene3D G3DSA:3.30.360.10 122 336 2.7E-114 T 14-10-2018 VEJY3_08950 074aefc3afa471e65f033c028bbac6af 347 Gene3D G3DSA:3.40.50.720 5 313 2.7E-114 T 14-10-2018 VEJY3_08950 074aefc3afa471e65f033c028bbac6af 347 SUPERFAMILY SSF51735 3 196 4.23E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08950 074aefc3afa471e65f033c028bbac6af 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 239 4.2E-14 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEJY3_22201 8bfffc9c414f171749ed0994076f7bfc 627 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 109 533 4.2E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 SUPERFAMILY SSF56925 18 170 4.71E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 269 3.7E-5 T 14-10-2018 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 270 289 3.7E-5 T 14-10-2018 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 290 310 3.7E-5 T 14-10-2018 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01021 OMPA domain signature 237 252 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01021 OMPA domain signature 252 268 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 PRINTS PR01021 OMPA domain signature 207 229 1.3E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 Gene3D G3DSA:3.30.1330.60 182 314 1.2E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 Gene3D G3DSA:2.40.160.20 5 181 2.4E-40 T 14-10-2018 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 Pfam PF01389 OmpA-like transmembrane domain 18 170 2.6E-33 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 SUPERFAMILY SSF103088 186 307 3.92E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_03495 30d9aa95e14fcf4000feebf01fa02520 316 Pfam PF00691 OmpA family 207 301 7.8E-25 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_16996 97327fe0b4dd586fffd95fc164d06740 305 Pfam PF00892 EamA-like transporter family 146 280 6.1E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_16996 97327fe0b4dd586fffd95fc164d06740 305 Pfam PF00892 EamA-like transporter family 11 136 3.6E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_16996 97327fe0b4dd586fffd95fc164d06740 305 SUPERFAMILY SSF103481 46 139 4.97E-14 T 14-10-2018 VEJY3_16996 97327fe0b4dd586fffd95fc164d06740 305 SUPERFAMILY SSF103481 182 281 1.57E-13 T 14-10-2018 VEJY3_14195 644babe59e9acff2334a8f4cadba1d03 240 Pfam PF08348 YheO-like PAS domain 31 139 9.5E-36 T 14-10-2018 IPR013559 YheO-like VEJY3_14195 644babe59e9acff2334a8f4cadba1d03 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 14-10-2018 IPR013559 YheO-like VEJY3_14195 644babe59e9acff2334a8f4cadba1d03 240 Pfam PF13309 HTH domain 174 231 1.8E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VEJY3_08420 b369c70f1a7d37b0ff2cde4e6364d4d1 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 119 8.2E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_08420 b369c70f1a7d37b0ff2cde4e6364d4d1 126 Gene3D G3DSA:3.10.180.10 1 125 7.5E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_08420 b369c70f1a7d37b0ff2cde4e6364d4d1 126 SUPERFAMILY SSF54593 2 124 6.62E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 5.5E-19 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 Gene3D G3DSA:1.10.10.60 223 337 3.0E-22 T 14-10-2018 VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 Pfam PF12833 Helix-turn-helix domain 251 328 2.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 SMART SM00342 245 327 4.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 SUPERFAMILY SSF46689 280 331 7.77E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 7.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_17256 a14988ef120c70308673e8cb3ffeea10 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 7.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_00760 99051e06b99f759bd5303bdb2e4c5c28 210 Gene3D G3DSA:3.30.1150.10 114 209 7.2E-19 T 14-10-2018 VEJY3_00760 99051e06b99f759bd5303bdb2e4c5c28 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 2.3E-14 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEJY3_00760 99051e06b99f759bd5303bdb2e4c5c28 210 SUPERFAMILY SSF74653 122 207 1.83E-16 T 14-10-2018 VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 SUPERFAMILY SSF53822 260 599 1.88E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Gene3D G3DSA:1.25.40.10 23 146 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Gene3D G3DSA:3.40.50.2300 261 596 1.5E-63 T 14-10-2018 VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Gene3D G3DSA:3.40.50.2300 369 597 1.5E-63 T 14-10-2018 VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.63 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Pfam PF04348 LppC putative lipoprotein 40 599 2.1E-160 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VEJY3_02025 ffd713c5cb723aa703da17ba4618b10d 604 Gene3D G3DSA:1.25.40.650 149 254 9.1E-17 T 14-10-2018 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 SMART SM00342 1032 1114 9.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 Gene3D G3DSA:2.130.10.10 175 398 7.2E-22 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 SUPERFAMILY SSF46689 1068 1113 9.86E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 Gene3D G3DSA:2.130.10.10 411 615 7.6E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 SUPERFAMILY SSF63829 121 352 4.9E-5 T 14-10-2018 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1069 1110 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1083 1098 1.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1098 1114 1.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 SUPERFAMILY SSF63829 248 436 1.18E-11 T 14-10-2018 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 Gene3D G3DSA:3.30.565.10 848 989 2.6E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 SUPERFAMILY SSF63829 383 577 5.36E-8 T 14-10-2018 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 Pfam PF12833 Helix-turn-helix domain 1039 1113 1.6E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_03890 6dccc89dffc0a3d2c3d0ccc8cbc880b9 1120 Gene3D G3DSA:1.10.10.60 1011 1120 1.3E-24 T 14-10-2018 VEJY3_16431 5fa4ba54ff3eae09f51c62c55cedbefd 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 2.2E-41 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16431 5fa4ba54ff3eae09f51c62c55cedbefd 337 SUPERFAMILY SSF55073 183 335 6.28E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_16431 5fa4ba54ff3eae09f51c62c55cedbefd 337 SMART SM00267 167 337 7.2E-51 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16431 5fa4ba54ff3eae09f51c62c55cedbefd 337 Gene3D G3DSA:3.30.70.270 164 336 7.1E-51 T 14-10-2018 VEJY3_19116 bc7f5fe5adf859209c6bffa916e2c0f1 182 Gene3D G3DSA:3.40.630.30 2 166 1.1E-29 T 14-10-2018 VEJY3_19116 bc7f5fe5adf859209c6bffa916e2c0f1 182 SUPERFAMILY SSF55729 1 154 2.23E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_19116 bc7f5fe5adf859209c6bffa916e2c0f1 182 Pfam PF00583 Acetyltransferase (GNAT) family 46 141 5.6E-14 T 14-10-2018 IPR000182 GNAT domain VEJY3_02170 8eb36a8e55de99a9e5a23bf15076c8a2 142 PIRSF PIRSF026426 1 142 6.8E-47 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VEJY3_02170 8eb36a8e55de99a9e5a23bf15076c8a2 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 8.6E-24 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VEJY3_18641 3cfd3b870728f08b01d8e9535dd6aa17 336 Pfam PF10974 Protein of unknown function (DUF2804) 16 335 2.6E-85 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 VEJY3_16851 5e540414012cdd518604417dec8866ad 219 Gene3D G3DSA:1.20.1440.100 17 90 1.7E-55 T 14-10-2018 VEJY3_16851 5e540414012cdd518604417dec8866ad 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 3.7E-27 T 14-10-2018 VEJY3_16851 5e540414012cdd518604417dec8866ad 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 4.6E-52 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VEJY3_16851 5e540414012cdd518604417dec8866ad 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 1.1E-24 T 14-10-2018 VEJY3_16851 5e540414012cdd518604417dec8866ad 219 SUPERFAMILY SSF56784 1 211 2.23E-28 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_16851 5e540414012cdd518604417dec8866ad 219 Gene3D G3DSA:3.40.50.1000 6 216 1.7E-55 T 14-10-2018 IPR023214 HAD superfamily VEJY3_16621 14f75ca8b1674affe3a3a4fa78402cce 282 Pfam PF02698 DUF218 domain 6 135 5.3E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VEJY3_23151 96598b3f2a0560c6edf8df34a9adfa75 435 Pfam PF01943 Polysaccharide biosynthesis protein 20 296 4.8E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VEJY3_01135 aa23fb3e884112c123b1aa9ff050dcce 341 Pfam PF14897 EpsG family 8 333 1.3E-26 T 14-10-2018 VEJY3_22911 a0497337d74e02eda03088b42add95e4 329 PIRSF PIRSF005651 1 324 5.7E-92 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VEJY3_22911 a0497337d74e02eda03088b42add95e4 329 SMART SM00244 22 214 3.9E-19 T 14-10-2018 IPR001107 Band 7 domain VEJY3_22911 a0497337d74e02eda03088b42add95e4 329 SUPERFAMILY SSF117892 55 219 2.09E-20 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VEJY3_22911 a0497337d74e02eda03088b42add95e4 329 Pfam PF01145 SPFH domain / Band 7 family 26 224 4.2E-25 T 14-10-2018 IPR001107 Band 7 domain VEJY3_17736 f65d0d1ae7bf9853390746859f7dc57e 300 Gene3D G3DSA:3.40.190.10 18 298 3.0E-91 T 14-10-2018 VEJY3_17736 f65d0d1ae7bf9853390746859f7dc57e 300 SUPERFAMILY SSF53850 14 298 4.53E-68 T 14-10-2018 VEJY3_17736 f65d0d1ae7bf9853390746859f7dc57e 300 Gene3D G3DSA:3.40.190.10 100 236 3.0E-91 T 14-10-2018 VEJY3_17736 f65d0d1ae7bf9853390746859f7dc57e 300 Pfam PF16868 NMT1-like family 18 298 4.8E-82 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 Gene3D G3DSA:3.40.190.10 95 300 7.4E-53 T 14-10-2018 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 Gene3D G3DSA:1.10.10.10 8 92 6.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 SUPERFAMILY SSF53850 93 301 1.47E-34 T 14-10-2018 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 Pfam PF03466 LysR substrate binding domain 93 301 1.5E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 SUPERFAMILY SSF46785 11 116 8.25E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_17811 002729e469d58488e857c90c1e6d5e2b 310 Gene3D G3DSA:3.40.190.10 168 274 7.4E-53 T 14-10-2018 VEJY3_00455 ab86d3d3d6b063f8257079a2948dc9e6 132 Pfam PF02416 mttA/Hcf106 family 4 32 5.6E-5 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VEJY3_00455 ab86d3d3d6b063f8257079a2948dc9e6 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 17.863 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VEJY3_00455 ab86d3d3d6b063f8257079a2948dc9e6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.8E-27 T 14-10-2018 VEJY3_00455 ab86d3d3d6b063f8257079a2948dc9e6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.8E-27 T 14-10-2018 VEJY3_00455 ab86d3d3d6b063f8257079a2948dc9e6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.8E-27 T 14-10-2018 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 3.8E-11 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 SUPERFAMILY SSF47648 8 72 3.53E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 Gene3D G3DSA:3.40.1030.10 72 316 1.2E-42 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 Gene3D G3DSA:1.20.970.10 3 71 5.2E-16 T 14-10-2018 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 Pfam PF00591 Glycosyl transferase family, a/b domain 98 253 9.1E-7 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_20271 1200264db6a012a5d74e2057db583a9a 317 SUPERFAMILY SSF52418 75 312 1.46E-43 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEJY3_20526 b699531c31b5ec5e7b8a46aa0a614ab0 345 Pfam PF01975 Survival protein SurE 40 246 1.5E-42 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEJY3_20526 b699531c31b5ec5e7b8a46aa0a614ab0 345 Gene3D G3DSA:3.40.1210.10 38 291 2.8E-46 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEJY3_20526 b699531c31b5ec5e7b8a46aa0a614ab0 345 SUPERFAMILY SSF64167 38 326 2.88E-43 T 14-10-2018 VEJY3_15080 83c779737283b02a4f2b1b1eb6286b82 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 4.2E-32 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_15080 83c779737283b02a4f2b1b1eb6286b82 242 Gene3D G3DSA:3.40.50.10090 4 240 9.7E-68 T 14-10-2018 VEJY3_15080 83c779737283b02a4f2b1b1eb6286b82 242 Gene3D G3DSA:3.40.50.10090 32 161 9.7E-68 T 14-10-2018 VEJY3_15080 83c779737283b02a4f2b1b1eb6286b82 242 SUPERFAMILY SSF69618 1 241 1.57E-49 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEJY3_12350 4eb2170e21e096efdcf7dd2869f0ef3f 607 Gene3D G3DSA:3.40.720.10 239 528 2.7E-51 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_12350 4eb2170e21e096efdcf7dd2869f0ef3f 607 Pfam PF11893 Domain of unknown function (DUF3413) 4 242 1.0E-50 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VEJY3_12350 4eb2170e21e096efdcf7dd2869f0ef3f 607 PIRSF PIRSF004950 1 606 9.5E-230 T 14-10-2018 IPR012159 Inner membrane protein YejM VEJY3_12350 4eb2170e21e096efdcf7dd2869f0ef3f 607 SUPERFAMILY SSF53649 250 571 1.01E-59 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_12350 4eb2170e21e096efdcf7dd2869f0ef3f 607 Pfam PF00884 Sulfatase 250 521 1.0E-31 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEJY3_20991 a1d1c47f7e108c340cab0df418909e99 225 Gene3D G3DSA:1.20.950.20 1 216 1.9E-80 T 14-10-2018 VEJY3_20991 a1d1c47f7e108c340cab0df418909e99 225 Pfam PF02665 Nitrate reductase gamma subunit 6 224 3.2E-79 T 14-10-2018 IPR023234 NarG-like domain VEJY3_20991 a1d1c47f7e108c340cab0df418909e99 225 SUPERFAMILY SSF103501 1 224 8.89E-68 T 14-10-2018 IPR036197 NarG-like superfamily VEJY3_09325 87d896501e448ba793e886758340d7d5 272 PIRSF PIRSF001359 1 271 6.8E-70 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_09325 87d896501e448ba793e886758340d7d5 272 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 266 1.7E-77 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_09325 87d896501e448ba793e886758340d7d5 272 SUPERFAMILY SSF51569 3 263 1.21E-74 T 14-10-2018 VEJY3_09325 87d896501e448ba793e886758340d7d5 272 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 82 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEJY3_09325 87d896501e448ba793e886758340d7d5 272 Gene3D G3DSA:3.20.20.70 1 272 3.0E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 PIRSF PIRSF004669 1 89 2.5E-30 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEJY3_11525 3e191652fed285c200cb50207f26103a 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.5E-33 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 Pfam PF00005 ABC transporter 20 164 7.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 SMART SM00382 29 220 3.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 SUPERFAMILY SSF52540 5 242 4.06E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 Gene3D G3DSA:3.40.50.300 1 240 1.0E-73 T 14-10-2018 VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 Pfam PF08402 TOBE domain 276 342 1.5E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_12865 338faee8b9857383bc3ae1cc43795e62 343 SUPERFAMILY SSF50331 257 342 6.8E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.4E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Pfam PF00501 AMP-binding enzyme 83 522 3.8E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.457 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 SUPERFAMILY SSF56801 9 643 2.22E-182 T 14-10-2018 VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.8E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Gene3D G3DSA:3.40.50.12780 50 515 2.6E-104 T 14-10-2018 VEJY3_14620 6fe71a7dcd7c46b5156c694423b8743a 649 Gene3D G3DSA:3.30.300.30 518 649 5.4E-31 T 14-10-2018 VEJY3_02720 fb13430e95fcbcbf80835055ef3c7308 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.169 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VEJY3_02720 fb13430e95fcbcbf80835055ef3c7308 168 Gene3D G3DSA:1.10.10.10 1 144 3.7E-55 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02720 fb13430e95fcbcbf80835055ef3c7308 168 SUPERFAMILY SSF46785 2 133 2.79E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02720 fb13430e95fcbcbf80835055ef3c7308 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VEJY3_02720 fb13430e95fcbcbf80835055ef3c7308 168 Pfam PF02082 Transcriptional regulator 1 83 4.4E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VEJY3_02965 bc33fa627bf774fc2effd7854ff6ea79 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.3E-30 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VEJY3_02965 bc33fa627bf774fc2effd7854ff6ea79 147 Gene3D G3DSA:3.30.530.20 1 143 5.0E-37 T 14-10-2018 IPR023393 START-like domain superfamily VEJY3_02965 bc33fa627bf774fc2effd7854ff6ea79 147 SUPERFAMILY SSF55961 1 143 2.0E-34 T 14-10-2018 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 1.7E-38 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 Gene3D G3DSA:3.30.300.30 151 246 1.7E-10 T 14-10-2018 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 3.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 3.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 3.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 3.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 3.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 PIRSF PIRSF004862 27 580 5.7E-159 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEJY3_11580 2add7774dc5c4cacc83bd6d5642df139 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 3.9E-54 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF VEJY3_19466 90b0ac4f88b1fb8654a94b674419d368 105 Gene3D G3DSA:1.10.760.10 21 104 1.2E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_19466 90b0ac4f88b1fb8654a94b674419d368 105 SUPERFAMILY SSF46626 32 102 7.09E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_19466 90b0ac4f88b1fb8654a94b674419d368 105 Pfam PF00034 Cytochrome c 33 98 8.6E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_12480 73900aa2303d7e7c725040fb189a6e55 479 Gene3D G3DSA:3.30.450.380 5 223 2.2E-43 T 14-10-2018 VEJY3_12480 73900aa2303d7e7c725040fb189a6e55 479 Gene3D G3DSA:3.40.50.300 224 447 1.6E-70 T 14-10-2018 VEJY3_12480 73900aa2303d7e7c725040fb189a6e55 479 Pfam PF00437 Type II/IV secretion system protein 128 405 1.1E-84 T 14-10-2018 IPR001482 Type II/IV secretion system protein VEJY3_12480 73900aa2303d7e7c725040fb189a6e55 479 SUPERFAMILY SSF52540 108 444 2.39E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 Gene3D G3DSA:3.30.420.40 82 211 3.8E-16 T 14-10-2018 VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 Gene3D G3DSA:3.30.420.40 212 361 2.6E-31 T 14-10-2018 VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 Pfam PF00480 ROK family 89 384 5.2E-37 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 SUPERFAMILY SSF46785 17 73 9.85E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 SUPERFAMILY SSF53067 87 384 1.2E-35 T 14-10-2018 VEJY3_24056 aaa0ca49d290d004692df89cfb43f333 389 Gene3D G3DSA:1.10.10.10 7 74 6.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 Pfam PF00248 Aldo/keto reductase family 22 262 3.1E-43 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 SUPERFAMILY SSF51430 3 265 1.18E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 231 246 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PIRSF PIRSF000097 113 279 3.1E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PIRSF PIRSF000097 1 116 7.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PRINTS PR00069 Aldo-keto reductase signature 96 114 1.1E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PRINTS PR00069 Aldo-keto reductase signature 125 142 1.1E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PRINTS PR00069 Aldo-keto reductase signature 159 188 1.1E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.1E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.1E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEJY3_21656 ab23473b3c153cc6c7f9e382c53df36d 289 Gene3D G3DSA:3.20.20.100 1 281 4.8E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_04815 645b4de95892c6d612eebd232c9fcff4 241 Pfam PF04288 MukE-like family 10 234 3.0E-118 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VEJY3_04815 645b4de95892c6d612eebd232c9fcff4 241 Gene3D G3DSA:1.10.10.2250 1 78 2.3E-34 T 14-10-2018 VEJY3_04815 645b4de95892c6d612eebd232c9fcff4 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.619 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VEJY3_04815 645b4de95892c6d612eebd232c9fcff4 241 Gene3D G3DSA:1.10.10.2260 88 194 2.3E-49 T 14-10-2018 VEJY3_07460 4e0bc905417fe73447e5e1cd6d6e4997 227 Gene3D G3DSA:3.40.50.300 1 202 2.5E-9 T 14-10-2018 VEJY3_20086 22548e9766e4b50809bcd88afbd5d73f 157 PIRSF PIRSF003174 1 155 5.8E-50 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VEJY3_20086 22548e9766e4b50809bcd88afbd5d73f 157 Pfam PF05981 CreA protein 22 144 3.0E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VEJY3_14515 0437567fb4fe82bf1b67fa93dd5fb6f0 461 Pfam PF01554 MatE 32 191 7.8E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_14515 0437567fb4fe82bf1b67fa93dd5fb6f0 461 Pfam PF01554 MatE 255 416 5.9E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_14515 0437567fb4fe82bf1b67fa93dd5fb6f0 461 PIRSF PIRSF006603 6 459 2.5E-129 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 PIRSF PIRSF001434 1 385 1.9E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 SUPERFAMILY SSF53383 9 382 2.56E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 Gene3D G3DSA:3.40.640.10 3 248 1.4E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 2.1E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 Gene3D G3DSA:3.90.1150.10 249 386 4.6E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_14135 a702c0b0c3f797ea0aa7ec63544e5766 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 Gene3D G3DSA:3.30.950.10 127 253 1.6E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 5.6E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 Gene3D G3DSA:3.40.1010.10 10 126 3.0E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEJY3_19576 d8a7745ad1179f1c8e54592fe0467113 256 SUPERFAMILY SSF53790 6 250 2.36E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEJY3_01625 dfe0eb5954a3b7d4878eb43fb6743331 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 9.0E-39 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VEJY3_21691 b08f5b386a84c32eb0c0c5bf1e4ebbbd 177 Gene3D G3DSA:3.30.1380.20 21 176 3.2E-5 T 14-10-2018 VEJY3_21691 b08f5b386a84c32eb0c0c5bf1e4ebbbd 177 SUPERFAMILY SSF111126 9 174 1.15E-14 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VEJY3_21691 b08f5b386a84c32eb0c0c5bf1e4ebbbd 177 SMART SM00989 107 175 2.2E-4 T 14-10-2018 IPR004096 4-vinyl reductase, 4VR VEJY3_01590 81f316fe125def85da31890186bf4006 311 Gene3D G3DSA:3.40.50.720 1 146 1.0E-65 T 14-10-2018 VEJY3_01590 81f316fe125def85da31890186bf4006 311 Gene3D G3DSA:3.90.110.10 147 311 9.6E-56 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_01590 81f316fe125def85da31890186bf4006 311 SUPERFAMILY SSF51735 1 145 1.25E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01590 81f316fe125def85da31890186bf4006 311 SUPERFAMILY SSF56327 146 309 9.11E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEJY3_01590 81f316fe125def85da31890186bf4006 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.9E-50 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VEJY3_01590 81f316fe125def85da31890186bf4006 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.4E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VEJY3_01590 81f316fe125def85da31890186bf4006 311 PIRSF PIRSF000102 1 308 1.6E-63 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEJY3_01590 81f316fe125def85da31890186bf4006 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VEJY3_01590 81f316fe125def85da31890186bf4006 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.477 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 4.9E-4 T 14-10-2018 VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.6E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 8.3E-59 T 14-10-2018 VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 SUPERFAMILY SSF51735 2 245 3.15E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 Gene3D G3DSA:3.40.50.720 1 245 3.2E-76 T 14-10-2018 VEJY3_17601 c0def785fcf426fd16d825d4051a9db7 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_22301 6516d1dd57fe6c91d108ebbe6da9e6e2 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 430 1.0E-77 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_22301 6516d1dd57fe6c91d108ebbe6da9e6e2 441 PIRSF PIRSF006066 5 441 1.5E-74 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_23781 405e38ac684c5e2de4e759124b23b6bd 425 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 44 420 6.0E-173 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_23781 405e38ac684c5e2de4e759124b23b6bd 425 SUPERFAMILY SSF56935 23 425 5.92E-129 T 14-10-2018 VEJY3_23781 405e38ac684c5e2de4e759124b23b6bd 425 Pfam PF02264 LamB porin 25 425 1.6E-121 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_23781 405e38ac684c5e2de4e759124b23b6bd 425 Hamap MF_01301 Maltoporin [lamB]. 1 425 47.09 T 14-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 VEJY3_23781 405e38ac684c5e2de4e759124b23b6bd 425 Gene3D G3DSA:2.40.170.10 23 425 7.3E-133 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEJY3_09965 58c72c011143ef4805e489b99e2a21bc 505 SUPERFAMILY SSF117457 317 489 1.7E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VEJY3_09965 58c72c011143ef4805e489b99e2a21bc 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VEJY3_09965 58c72c011143ef4805e489b99e2a21bc 505 PIRSF PIRSF001394 1 505 1.5E-216 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VEJY3_09965 58c72c011143ef4805e489b99e2a21bc 505 Gene3D G3DSA:3.20.130.10 309 490 2.1E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VEJY3_09965 58c72c011143ef4805e489b99e2a21bc 505 Pfam PF05683 Fumarase C-terminus 289 490 2.8E-83 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VEJY3_20601 1dd0f2078be5a3362f8bac738ccf18c5 261 Gene3D G3DSA:1.10.12.10 202 260 2.8E-18 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEJY3_20601 1dd0f2078be5a3362f8bac738ccf18c5 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 6.8E-55 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_20601 1dd0f2078be5a3362f8bac738ccf18c5 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEJY3_20601 1dd0f2078be5a3362f8bac738ccf18c5 261 SUPERFAMILY SSF52096 5 260 6.87E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20601 1dd0f2078be5a3362f8bac738ccf18c5 261 Gene3D G3DSA:3.90.226.10 5 200 3.1E-59 T 14-10-2018 VEJY3_23621 193bd8cab4186caf1e244329982e0500 221 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 215 1.4E-50 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEJY3_23621 193bd8cab4186caf1e244329982e0500 221 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 220 28.667 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEJY3_05470 37764de354d88cea6246d8666ca1ce91 139 Pfam PF12680 SnoaL-like domain 8 108 1.9E-12 T 14-10-2018 IPR037401 SnoaL-like domain VEJY3_05470 37764de354d88cea6246d8666ca1ce91 139 Gene3D G3DSA:3.10.450.50 5 125 3.4E-20 T 14-10-2018 VEJY3_05470 37764de354d88cea6246d8666ca1ce91 139 SUPERFAMILY SSF54427 5 130 1.72E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_20256 5b839ea1a5e92b22b612e3452934fffb 247 Gene3D G3DSA:3.30.20.10 141 186 1.8E-10 T 14-10-2018 VEJY3_20256 5b839ea1a5e92b22b612e3452934fffb 247 SUPERFAMILY SSF53955 108 231 1.33E-20 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_20256 5b839ea1a5e92b22b612e3452934fffb 247 Pfam PF00182 Chitinase class I 152 188 9.9E-5 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEJY3_20256 5b839ea1a5e92b22b612e3452934fffb 247 SUPERFAMILY SSF47090 19 76 3.3E-7 T 14-10-2018 IPR036365 PGBD-like superfamily VEJY3_20256 5b839ea1a5e92b22b612e3452934fffb 247 Gene3D G3DSA:1.10.101.10 19 87 3.8E-7 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VEJY3_05800 c369e4d75c9ea3994ba50b334d30c623 203 Gene3D G3DSA:1.20.120.1760 3 199 2.1E-19 T 14-10-2018 VEJY3_05800 c369e4d75c9ea3994ba50b334d30c623 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 4.3E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEJY3_05800 c369e4d75c9ea3994ba50b334d30c623 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 116 135 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 214 230 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 389 404 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 27 52 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 334 352 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 97 115 1.8E-22 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 Gene3D G3DSA:1.10.246.130 230 335 1.1E-12 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 Gene3D G3DSA:3.60.20.40 336 518 9.0E-60 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 Pfam PF01019 Gamma-glutamyltranspeptidase 20 515 2.5E-130 T 14-10-2018 VEJY3_06750 a3cda88334b8fc58b5aef905304d562d 522 SUPERFAMILY SSF56235 5 515 3.86E-142 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_14725 ff9ed10cb39d3febd01c9ab56c9b0c1b 375 Pfam PF01595 Domain of unknown function DUF21 9 177 4.8E-29 T 14-10-2018 IPR002550 CNNM, transmembrane domain VEJY3_14725 ff9ed10cb39d3febd01c9ab56c9b0c1b 375 Pfam PF00571 CBS domain 260 313 4.7E-5 T 14-10-2018 IPR000644 CBS domain VEJY3_14725 ff9ed10cb39d3febd01c9ab56c9b0c1b 375 SUPERFAMILY SSF54631 181 315 5.31E-26 T 14-10-2018 VEJY3_14725 ff9ed10cb39d3febd01c9ab56c9b0c1b 375 Gene3D G3DSA:3.10.580.10 186 315 1.4E-41 T 14-10-2018 VEJY3_19956 b326fd098e076c4144ee95443c130307 565 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 1.7E-36 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEJY3_19956 b326fd098e076c4144ee95443c130307 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.8E-19 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_19956 b326fd098e076c4144ee95443c130307 565 Gene3D G3DSA:3.40.190.10 122 322 7.6E-39 T 14-10-2018 VEJY3_19956 b326fd098e076c4144ee95443c130307 565 SUPERFAMILY SSF53850 117 559 5.25E-61 T 14-10-2018 VEJY3_15315 423edb16df55db3fe4c30613525c3dc2 364 Gene3D G3DSA:3.10.350.10 38 85 3.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily VEJY3_15315 423edb16df55db3fe4c30613525c3dc2 364 Pfam PF01476 LysM domain 40 85 1.5E-12 T 14-10-2018 IPR018392 LysM domain VEJY3_15315 423edb16df55db3fe4c30613525c3dc2 364 SMART SM00257 39 87 0.0039 T 14-10-2018 IPR018392 LysM domain VEJY3_15315 423edb16df55db3fe4c30613525c3dc2 364 SUPERFAMILY SSF54106 38 86 7.98E-7 T 14-10-2018 VEJY3_20116 d018a8be7ad7279214db7b6cc1d56144 382 Gene3D G3DSA:1.20.1090.10 181 380 1.6E-31 T 14-10-2018 VEJY3_20116 d018a8be7ad7279214db7b6cc1d56144 382 SUPERFAMILY SSF56796 2 361 1.31E-98 T 14-10-2018 VEJY3_20116 d018a8be7ad7279214db7b6cc1d56144 382 Gene3D G3DSA:3.40.50.1970 1 180 3.1E-51 T 14-10-2018 VEJY3_20116 d018a8be7ad7279214db7b6cc1d56144 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 354 1.9E-82 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_10775 f77ac22d03768e0bd39909b012e204b8 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 9.0E-302 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VEJY3_10775 f77ac22d03768e0bd39909b012e204b8 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 373.587 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VEJY3_09435 72e5e32befcdc131773b2a31484d5662 91 SUPERFAMILY SSF54913 1 65 6.89E-8 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEJY3_09435 72e5e32befcdc131773b2a31484d5662 91 Pfam PF09413 Putative prokaryotic signal transducing protein 6 65 6.2E-8 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 VEJY3_23976 c273edbc2b2c02d9c9f35283acb4f372 514 Pfam PF05547 Immune inhibitor A peptidase M6 89 285 7.6E-25 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VEJY3_23976 c273edbc2b2c02d9c9f35283acb4f372 514 SUPERFAMILY SSF55486 218 291 2.42E-8 T 14-10-2018 VEJY3_15035 8a19fded7a7964719666f9164d183346 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.7E-10 T 14-10-2018 VEJY3_15035 8a19fded7a7964719666f9164d183346 238 Gene3D G3DSA:1.20.120.1600 24 110 1.2E-55 T 14-10-2018 VEJY3_15035 8a19fded7a7964719666f9164d183346 238 SUPERFAMILY SSF56784 9 238 1.12E-35 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_15035 8a19fded7a7964719666f9164d183346 238 Gene3D G3DSA:3.40.50.1000 11 231 1.2E-55 T 14-10-2018 IPR023214 HAD superfamily VEJY3_24281 3eafc1c2abea418a4fd230548288a071 497 Gene3D G3DSA:1.20.1730.10 13 495 1.8E-95 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_24281 3eafc1c2abea418a4fd230548288a071 497 Pfam PF00474 Sodium:solute symporter family 36 437 1.5E-105 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 SUPERFAMILY SSF56796 5 381 2.36E-136 T 14-10-2018 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 7.5E-127 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 Gene3D G3DSA:1.20.1090.10 184 382 4.9E-78 T 14-10-2018 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 Gene3D G3DSA:3.40.50.1970 2 183 1.3E-56 T 14-10-2018 VEJY3_21836 3fdc542ccacd6863fe569f2f7e2c8457 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_13600 2f0463b24e54a21121982ce9d368d516 138 PIRSF PIRSF018193 8 138 4.9E-59 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VEJY3_13600 2f0463b24e54a21121982ce9d368d516 138 SUPERFAMILY SSF89946 8 126 3.27E-39 T 14-10-2018 IPR036701 RraB-like superfamily VEJY3_13600 2f0463b24e54a21121982ce9d368d516 138 Gene3D G3DSA:3.30.70.970 1 132 8.2E-59 T 14-10-2018 IPR036701 RraB-like superfamily VEJY3_13600 2f0463b24e54a21121982ce9d368d516 138 Pfam PF06877 Regulator of ribonuclease activity B 18 120 2.8E-34 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain VEJY3_13600 2f0463b24e54a21121982ce9d368d516 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.881 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VEJY3_08130 a82a35559b1ccdd1094fc32103e3f467 294 Gene3D G3DSA:1.10.443.10 129 292 5.1E-27 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_08130 a82a35559b1ccdd1094fc32103e3f467 294 Pfam PF00589 Phage integrase family 131 285 2.6E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_08130 a82a35559b1ccdd1094fc32103e3f467 294 SUPERFAMILY SSF56349 26 288 8.05E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_08130 a82a35559b1ccdd1094fc32103e3f467 294 Gene3D G3DSA:1.10.150.130 18 123 5.3E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 200 2.6E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 Gene3D G3DSA:3.40.30.10 1 77 4.8E-21 T 14-10-2018 VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 SUPERFAMILY SSF52833 1 87 1.66E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 SUPERFAMILY SSF47616 82 203 3.9E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 6.4E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_20241 c4741a1f1f200dbdececd2bc2a56760e 204 Gene3D G3DSA:1.20.1050.10 83 199 1.2E-31 T 14-10-2018 VEJY3_14810 14d75b9fae84c2a562e8c47d6477d351 307 PIRSF PIRSF000545 1 307 4.1E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VEJY3_14810 14d75b9fae84c2a562e8c47d6477d351 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 234 1.9E-12 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEJY3_14810 14d75b9fae84c2a562e8c47d6477d351 307 SUPERFAMILY SSF52540 3 306 1.18E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_14810 14d75b9fae84c2a562e8c47d6477d351 307 Gene3D G3DSA:3.40.50.300 1 307 1.2E-93 T 14-10-2018 VEJY3_14810 14d75b9fae84c2a562e8c47d6477d351 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 176.822 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VEJY3_08030 65a1ce3d2632a12e93abf0ec5f921243 211 SUPERFAMILY SSF48452 49 180 1.77E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_08030 65a1ce3d2632a12e93abf0ec5f921243 211 Gene3D G3DSA:1.25.40.10 17 190 2.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_08030 65a1ce3d2632a12e93abf0ec5f921243 211 Pfam PF13181 Tetratricopeptide repeat 137 155 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_01190 bcb0304aba779d79d804dd95a7d3b0a9 214 SUPERFAMILY SSF56112 6 185 6.96E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_01190 bcb0304aba779d79d804dd95a7d3b0a9 214 Pfam PF10707 PhoP regulatory network protein YrbL 11 183 7.8E-29 T 14-10-2018 IPR019647 PhoP regulatory network protein YrbL VEJY3_17071 453fadf4f76fa2310bf0cce2fa230c03 163 SUPERFAMILY SSF158694 17 163 4.19E-34 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VEJY3_17071 453fadf4f76fa2310bf0cce2fa230c03 163 Pfam PF09349 OHCU decarboxylase 13 159 1.8E-33 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VEJY3_17071 453fadf4f76fa2310bf0cce2fa230c03 163 Gene3D G3DSA:1.10.3330.10 11 163 2.7E-50 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 Pfam PF03734 L,D-transpeptidase catalytic domain 97 231 4.5E-21 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 Gene3D G3DSA:2.40.440.10 20 299 1.0E-82 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 SMART SM00257 40 84 9.7E-4 T 14-10-2018 IPR018392 LysM domain VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 SUPERFAMILY SSF54106 40 84 8.24E-7 T 14-10-2018 VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 SUPERFAMILY SSF141523 95 231 3.27E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEJY3_23356 a817349dd1a28eaa872ca702c2f65d75 301 Pfam PF01476 LysM domain 41 84 2.7E-6 T 14-10-2018 IPR018392 LysM domain VEJY3_22376 54f97143e2a939ffee9afc49d1c4b51b 113 Pfam PF11777 Protein of unknown function (DUF3316) 2 106 3.0E-16 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEJY3_22376 54f97143e2a939ffee9afc49d1c4b51b 113 PIRSF PIRSF028299 1 110 5.4E-20 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEJY3_23006 be529230e7f9f1569cea11ddcf932cb5 500 Gene3D G3DSA:3.50.50.60 314 456 8.4E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23006 be529230e7f9f1569cea11ddcf932cb5 500 Gene3D G3DSA:3.50.50.60 1 156 3.9E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23006 be529230e7f9f1569cea11ddcf932cb5 500 Gene3D G3DSA:3.50.50.60 157 237 5.5E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23006 be529230e7f9f1569cea11ddcf932cb5 500 SUPERFAMILY SSF51905 1 390 3.08E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_23006 be529230e7f9f1569cea11ddcf932cb5 500 Pfam PF00743 Flavin-binding monooxygenase-like 60 216 9.7E-11 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 VEJY3_22701 e3c98ca0b384415cfec5ca2bab6d65e7 285 Gene3D G3DSA:3.40.1190.20 2 285 4.8E-88 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_22701 e3c98ca0b384415cfec5ca2bab6d65e7 285 SUPERFAMILY SSF53613 2 275 3.27E-68 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_22701 e3c98ca0b384415cfec5ca2bab6d65e7 285 Pfam PF08543 Phosphomethylpyrimidine kinase 78 253 4.5E-22 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEJY3_22531 af28cf91aa459f9664a6b5b065d30334 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 153 1.6E-31 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_12200 2e902645c5f50f9f4eb7bd7ae77ad118 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 7.9E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VEJY3_04070 5895b5980fd60de7cfb66b2ddc7a9961 394 Pfam PF00425 chorismate binding enzyme 115 374 1.4E-72 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEJY3_04070 5895b5980fd60de7cfb66b2ddc7a9961 394 SUPERFAMILY SSF56322 21 385 6.67E-88 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_04070 5895b5980fd60de7cfb66b2ddc7a9961 394 Gene3D G3DSA:3.60.120.10 1 390 4.8E-123 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 SUPERFAMILY SSF103088 190 303 2.09E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 SUPERFAMILY SSF56925 29 178 4.71E-24 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 Gene3D G3DSA:3.30.1330.60 194 307 5.7E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 2.7E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 Gene3D G3DSA:2.40.160.20 15 193 2.6E-22 T 14-10-2018 VEJY3_23941 6c6dc8eec67a6f4cb785b25c3ca5dff9 307 Pfam PF00691 OmpA family 209 297 7.0E-16 T 14-10-2018 IPR006665 OmpA-like domain VEJY3_14215 6f80ce61ca2d33f2b9d577868f7e0248 313 Gene3D G3DSA:3.60.20.30 178 313 4.8E-46 T 14-10-2018 VEJY3_14215 6f80ce61ca2d33f2b9d577868f7e0248 313 SUPERFAMILY SSF56235 5 308 3.86E-96 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEJY3_14215 6f80ce61ca2d33f2b9d577868f7e0248 313 Pfam PF01112 Asparaginase 7 310 3.2E-109 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VEJY3_00305 bab8e8172d341c847141dc122801e466 175 Gene3D G3DSA:1.20.1260.10 1 175 6.1E-54 T 14-10-2018 IPR012347 Ferritin-like VEJY3_00305 bab8e8172d341c847141dc122801e466 175 SUPERFAMILY SSF47240 1 160 4.79E-59 T 14-10-2018 IPR009078 Ferritin-like superfamily VEJY3_00305 bab8e8172d341c847141dc122801e466 175 Pfam PF00210 Ferritin-like domain 8 143 1.0E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEJY3_14355 2bb93bf8ada8bb8fba1ea1c2b57e427e 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEJY3_14355 2bb93bf8ada8bb8fba1ea1c2b57e427e 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 14-10-2018 VEJY3_14355 2bb93bf8ada8bb8fba1ea1c2b57e427e 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEJY3_14355 2bb93bf8ada8bb8fba1ea1c2b57e427e 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEJY3_14355 2bb93bf8ada8bb8fba1ea1c2b57e427e 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 Gene3D G3DSA:3.40.190.290 90 291 8.9E-62 T 14-10-2018 VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 Gene3D G3DSA:1.10.10.10 1 85 2.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 Pfam PF03466 LysR substrate binding domain 88 291 2.5E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 SUPERFAMILY SSF46785 1 87 2.12E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_23461 e6bab1fc5634f987e019a0ee482a0757 299 SUPERFAMILY SSF53850 88 292 3.44E-42 T 14-10-2018 VEJY3_04630 eab6e97b596feff244f68524e1d3b6d3 246 SUPERFAMILY SSF161098 11 233 2.62E-39 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04630 eab6e97b596feff244f68524e1d3b6d3 246 Gene3D G3DSA:1.10.3720.10 3 243 1.4E-48 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04630 eab6e97b596feff244f68524e1d3b6d3 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 6.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 Gene3D G3DSA:3.40.720.10 6 508 1.5E-209 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 6.7E-81 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 PIRSF PIRSF001492 1 510 3.6E-202 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.8E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 Gene3D G3DSA:3.40.1450.10 78 310 1.5E-209 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.459 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 SUPERFAMILY SSF53649 4 508 1.31E-75 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEJY3_14410 48d48cbaffce357f29cfb78580a50f7c 510 SUPERFAMILY SSF64158 78 308 3.27E-81 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEJY3_18946 6cf43b9822c8fc6b4e6d6e0a14576de3 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.206 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 VEJY3_18946 6cf43b9822c8fc6b4e6d6e0a14576de3 139 SUPERFAMILY SSF102546 1 139 5.62E-45 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEJY3_18946 6cf43b9822c8fc6b4e6d6e0a14576de3 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.5E-49 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEJY3_18946 6cf43b9822c8fc6b4e6d6e0a14576de3 139 Gene3D G3DSA:3.40.1650.10 8 136 4.2E-38 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 SUPERFAMILY SSF81901 65 178 2.35E-20 T 14-10-2018 VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 SMART SM00671 72 107 0.0025 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 SMART SM00671 108 143 6.9E-5 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 SMART SM00671 144 179 31.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 Gene3D G3DSA:1.25.40.10 53 211 1.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 Pfam PF08238 Sel1 repeat 74 106 0.011 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 Pfam PF08238 Sel1 repeat 109 143 2.6E-4 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_14325 caf256e8739cffb0c70023347d2f72fb 211 Pfam PF08238 Sel1 repeat 149 171 190.0 T 14-10-2018 IPR006597 Sel1-like repeat VEJY3_19426 3869d453a926db3e062c6078aa1525c3 341 Gene3D G3DSA:3.40.190.170 32 340 1.8E-57 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_19426 3869d453a926db3e062c6078aa1525c3 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 318 1.5E-36 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_22661 3fb62f76323610b8f04715414a720b82 268 SMART SM00382 38 237 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_22661 3fb62f76323610b8f04715414a720b82 268 Gene3D G3DSA:3.40.50.300 13 267 5.5E-58 T 14-10-2018 VEJY3_22661 3fb62f76323610b8f04715414a720b82 268 SUPERFAMILY SSF52540 15 251 3.27E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22661 3fb62f76323610b8f04715414a720b82 268 Pfam PF00005 ABC transporter 29 178 2.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_22661 3fb62f76323610b8f04715414a720b82 268 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 PIRSF PIRSF003107 4 223 7.9E-70 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 Gene3D G3DSA:1.20.58.220 2 117 5.2E-41 T 14-10-2018 IPR038078 PhoU-like domain superfamily VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 Pfam PF01895 PhoU domain 23 108 5.2E-23 T 14-10-2018 IPR026022 PhoU domain VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 Pfam PF01895 PhoU domain 128 210 1.9E-16 T 14-10-2018 IPR026022 PhoU domain VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 Gene3D G3DSA:1.20.58.220 118 230 1.5E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily VEJY3_02640 b12c5f815b15173725fff9660b6aa53a 232 SUPERFAMILY SSF109755 10 225 2.3E-69 T 14-10-2018 VEJY3_09710 8e7a96d9f97222064de2e1a29d230f72 783 Pfam PF06791 Prophage tail length tape measure protein 56 229 8.3E-11 T 14-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal VEJY3_08980 c51003d0544a9d342b3bd6239b313b78 285 Pfam PF04321 RmlD substrate binding domain 4 282 1.1E-48 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VEJY3_08980 c51003d0544a9d342b3bd6239b313b78 285 Gene3D G3DSA:3.40.50.720 2 284 1.4E-64 T 14-10-2018 VEJY3_08980 c51003d0544a9d342b3bd6239b313b78 285 SUPERFAMILY SSF51735 4 282 3.0E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_16736 c3498b4d98279297f090a8da335fcce7 217 Pfam PF00857 Isochorismatase family 10 208 1.5E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VEJY3_16736 c3498b4d98279297f090a8da335fcce7 217 SUPERFAMILY SSF52499 4 210 1.03E-25 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_16736 c3498b4d98279297f090a8da335fcce7 217 Gene3D G3DSA:3.40.50.850 7 212 5.9E-35 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 6.4E-44 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 SMART SM00846 127 288 2.5E-53 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.3E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.3E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.3E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.3E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 4.7E-22 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 SUPERFAMILY SSF51735 128 304 7.55E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 Gene3D G3DSA:3.40.50.720 129 462 2.1E-113 T 14-10-2018 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 Gene3D G3DSA:3.30.360.10 287 452 2.1E-113 T 14-10-2018 VEJY3_17496 95e4297a71d33a49d6b058243be9f91d 477 SUPERFAMILY SSF55347 288 451 4.05E-52 T 14-10-2018 VEJY3_00150 966f128726457620cc6b4c1c2517c81c 485 Pfam PF02386 Cation transport protein 39 477 4.5E-89 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEJY3_00150 966f128726457620cc6b4c1c2517c81c 485 PIRSF PIRSF006247 1 485 5.6E-176 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEJY3_07580 fb39a0f80da4b4f2f00ac12cab9c0b35 80 Gene3D G3DSA:3.40.30.10 1 80 2.5E-21 T 14-10-2018 VEJY3_07580 fb39a0f80da4b4f2f00ac12cab9c0b35 80 SUPERFAMILY SSF52833 1 74 1.15E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_07580 fb39a0f80da4b4f2f00ac12cab9c0b35 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 2.6E-20 T 14-10-2018 IPR008554 Glutaredoxin-like VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 Gene3D G3DSA:3.40.190.290 92 287 9.3E-69 T 14-10-2018 VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 Pfam PF03466 LysR substrate binding domain 88 288 3.0E-48 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 Gene3D G3DSA:1.10.10.10 3 91 6.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 SUPERFAMILY SSF53850 89 289 5.07E-49 T 14-10-2018 VEJY3_16031 12ad9baf8620db7c189283b65d0476d5 289 SUPERFAMILY SSF46785 3 87 6.17E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_12705 a75c9ae5df7f6fa510862871f873e12c 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 6.1E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEJY3_12705 a75c9ae5df7f6fa510862871f873e12c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 9.4E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEJY3_12705 a75c9ae5df7f6fa510862871f873e12c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.4E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEJY3_12705 a75c9ae5df7f6fa510862871f873e12c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 9.4E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEJY3_12705 a75c9ae5df7f6fa510862871f873e12c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.4E-45 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEJY3_03605 ae18f4e8903b5a4e8a152568a4a32d30 169 Gene3D G3DSA:2.70.70.10 9 169 6.4E-62 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_03605 ae18f4e8903b5a4e8a152568a4a32d30 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEJY3_03605 ae18f4e8903b5a4e8a152568a4a32d30 169 SUPERFAMILY SSF51261 18 166 3.49E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_03605 ae18f4e8903b5a4e8a152568a4a32d30 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.7E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEJY3_15265 b13dc59d2b9468b2ec6123555ca01340 182 Gene3D G3DSA:2.160.10.10 3 180 5.4E-54 T 14-10-2018 VEJY3_15265 b13dc59d2b9468b2ec6123555ca01340 182 SUPERFAMILY SSF51161 4 175 6.93E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_15265 b13dc59d2b9468b2ec6123555ca01340 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 2.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_15265 b13dc59d2b9468b2ec6123555ca01340 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 0.0016 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_06530 ee38caab8af5fa5a5b917c611333591a 127 SUPERFAMILY SSF74653 60 124 4.84E-11 T 14-10-2018 VEJY3_06530 ee38caab8af5fa5a5b917c611333591a 127 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 60 124 1.1E-9 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEJY3_06530 ee38caab8af5fa5a5b917c611333591a 127 Gene3D G3DSA:3.30.2420.10 57 122 1.4E-7 T 14-10-2018 VEJY3_10145 f25e80ab50874706da0acb13baecfad5 93 Gene3D G3DSA:3.10.20.30 2 90 3.5E-15 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VEJY3_10145 f25e80ab50874706da0acb13baecfad5 93 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 74 1.7E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEJY3_10145 f25e80ab50874706da0acb13baecfad5 93 SUPERFAMILY SSF54292 3 81 1.7E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_10145 f25e80ab50874706da0acb13baecfad5 93 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEJY3_00365 e2702dc1d6ed6287298fdda2d14fa732 299 Pfam PF00482 Type II secretion system (T2SS), protein F 135 256 2.0E-16 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_00365 e2702dc1d6ed6287298fdda2d14fa732 299 Gene3D G3DSA:1.20.81.30 120 234 5.1E-9 T 14-10-2018 VEJY3_12365 fc3a37ead6e17ab38fec5ef3b958c007 98 Pfam PF07130 YebG protein 1 72 2.3E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG VEJY3_12365 fc3a37ead6e17ab38fec5ef3b958c007 98 Gene3D G3DSA:1.10.10.710 21 98 9.4E-7 T 14-10-2018 IPR038627 YebG-like superfamily VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.417 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 Pfam PF01546 Peptidase family M20/M25/M40 139 401 1.2E-12 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 1.1E-159 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 Gene3D G3DSA:3.40.630.10 4 400 9.8E-171 T 14-10-2018 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 SUPERFAMILY SSF55031 209 320 5.58E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 Pfam PF07687 Peptidase dimerisation domain 206 305 1.2E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 Gene3D G3DSA:3.30.70.360 209 319 9.8E-171 T 14-10-2018 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 PIRSF PIRSF037215 1 408 1.3E-180 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEJY3_17671 7938b4e4a5e19dbfcc979eb1f7acb91a 410 SUPERFAMILY SSF53187 1 406 6.81E-78 T 14-10-2018 VEJY3_00450 4436138274c50a1486e6749edb237d72 88 Pfam PF02416 mttA/Hcf106 family 4 55 1.0E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VEJY3_00450 4436138274c50a1486e6749edb237d72 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 87 25.183 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 SMART SM01097 3 133 8.7E-92 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 SUPERFAMILY SSF52317 153 377 2.45E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 SUPERFAMILY SSF52021 5 142 3.14E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 Gene3D G3DSA:3.40.50.880 152 378 1.0E-75 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.2E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.578 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 Gene3D G3DSA:3.50.30.20 3 151 1.4E-61 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 14-10-2018 VEJY3_02130 1cd7e5789d32b8f785c154a0b96fc3e2 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.2E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PIRSF PIRSF000345 5 326 7.4E-101 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 Pfam PF00487 Fatty acid desaturase 46 262 2.7E-20 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 2.4E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 2.4E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 2.4E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 2.4E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEJY3_19111 d1a40a7a95efcbc1d3291f9f6b5e46f8 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 2.4E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 SUPERFAMILY SSF53328 5 207 1.05E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 SUPERFAMILY SSF50486 208 310 9.22E-33 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 Gene3D G3DSA:3.10.25.10 210 314 2.4E-37 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.1E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 Pfam PF00551 Formyl transferase 6 182 3.2E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.849 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VEJY3_15325 ef098dec3e8cb4c1de84765e7faa7182 315 Gene3D G3DSA:3.40.50.170 1 209 4.2E-87 T 14-10-2018 VEJY3_23631 271a060d3a4b29d710dacd98097b245d 150 Gene3D G3DSA:3.10.129.10 2 138 1.2E-39 T 14-10-2018 VEJY3_23631 271a060d3a4b29d710dacd98097b245d 150 SUPERFAMILY SSF54637 7 134 4.64E-35 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_23631 271a060d3a4b29d710dacd98097b245d 150 Pfam PF13279 Thioesterase-like superfamily 16 134 1.3E-18 T 14-10-2018 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 Gene3D G3DSA:3.90.870.10 1 205 3.6E-89 T 14-10-2018 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 PIRSF PIRSF001259 3 369 2.3E-130 T 14-10-2018 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 Gene3D G3DSA:3.40.50.10990 206 368 4.4E-33 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 SUPERFAMILY SSF142695 205 367 1.31E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 SUPERFAMILY SSF55821 3 202 6.41E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.429 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 4.5E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEJY3_03135 cacd8bddd2ee432a6711c28c5f36d73b 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.3E-40 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEJY3_02940 929e6cbbae3a2789c242732f1fd40493 817 SUPERFAMILY SSF55486 44 254 2.07E-10 T 14-10-2018 VEJY3_02735 1a4d5867838f010ff8521c651cc5aae1 108 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 1.5E-26 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEJY3_02735 1a4d5867838f010ff8521c651cc5aae1 108 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 89 106 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VEJY3_02735 1a4d5867838f010ff8521c651cc5aae1 108 SUPERFAMILY SSF89360 1 97 4.32E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_02735 1a4d5867838f010ff8521c651cc5aae1 108 Gene3D G3DSA:2.60.300.12 2 108 1.7E-37 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEJY3_20936 e2eaf369a7b5997a5fd73fe4d449f02f 208 Pfam PF01810 LysE type translocator 14 201 1.9E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_07065 449682a613b164fc0ab72fdee62ef877 129 Gene3D G3DSA:3.40.50.300 3 129 1.3E-29 T 14-10-2018 VEJY3_07065 449682a613b164fc0ab72fdee62ef877 129 SUPERFAMILY SSF52540 4 105 2.91E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07065 449682a613b164fc0ab72fdee62ef877 129 Pfam PF13671 AAA domain 6 106 4.4E-14 T 14-10-2018 VEJY3_18461 7b7d3c230f72ee52b6897e5f27b25d32 347 Pfam PF03060 Nitronate monooxygenase 3 339 1.0E-73 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 VEJY3_18461 7b7d3c230f72ee52b6897e5f27b25d32 347 SUPERFAMILY SSF51412 1 334 4.12E-63 T 14-10-2018 VEJY3_18461 7b7d3c230f72ee52b6897e5f27b25d32 347 Gene3D G3DSA:3.20.20.70 1 345 3.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17916 cc89776d078c18468d8a6ce082fac534 163 Gene3D G3DSA:3.10.450.50 1 163 1.8E-43 T 14-10-2018 VEJY3_17916 cc89776d078c18468d8a6ce082fac534 163 Pfam PF00866 Ring hydroxylating beta subunit 14 155 2.1E-40 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 VEJY3_17916 cc89776d078c18468d8a6ce082fac534 163 SUPERFAMILY SSF54427 5 163 2.79E-49 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_23661 db701e8925405e1cb4804332cf51a6c7 290 SUPERFAMILY SSF52151 3 241 1.02E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_23661 db701e8925405e1cb4804332cf51a6c7 290 Pfam PF01734 Patatin-like phospholipase 7 170 7.3E-13 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEJY3_23661 db701e8925405e1cb4804332cf51a6c7 290 Gene3D G3DSA:3.40.1090.10 2 89 1.2E-10 T 14-10-2018 VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 Gene3D G3DSA:3.90.1150.10 289 422 7.3E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 3.5E-144 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 PIRSF PIRSF001434 1 422 2.0E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 SUPERFAMILY SSF53383 1 421 1.28E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 Gene3D G3DSA:3.40.640.10 1 285 2.6E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_02870 3bc1b9c6eccf9b866ac8a2f77b725d61 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEJY3_03525 436d710cea4b7691e9cd3e3c40d06e51 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 1.6E-18 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VEJY3_03525 436d710cea4b7691e9cd3e3c40d06e51 105 SUPERFAMILY SSF101498 2 97 1.7E-20 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 Pfam PF00813 FliP family 92 283 1.2E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_11530 f762e1ae8b33d52f72527f268129fd95 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEJY3_21651 676a300a0b856324df4837482554b72e 461 Gene3D G3DSA:1.10.1140.10 351 460 1.3E-34 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21651 676a300a0b856324df4837482554b72e 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 346 3.4E-57 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21651 676a300a0b856324df4837482554b72e 461 SUPERFAMILY SSF50615 7 79 3.14E-14 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21651 676a300a0b856324df4837482554b72e 461 SUPERFAMILY SSF52540 82 353 4.15E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21651 676a300a0b856324df4837482554b72e 461 Gene3D G3DSA:3.40.50.300 81 350 3.3E-91 T 14-10-2018 VEJY3_21651 676a300a0b856324df4837482554b72e 461 Gene3D G3DSA:2.40.10.170 2 80 7.6E-14 T 14-10-2018 VEJY3_21651 676a300a0b856324df4837482554b72e 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 78 5.4E-6 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_21651 676a300a0b856324df4837482554b72e 461 SUPERFAMILY SSF47917 351 458 6.8E-33 T 14-10-2018 VEJY3_14440 e438f420db67e6a5373ac101c32f4e2f 318 SUPERFAMILY SSF64182 5 317 7.06E-43 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VEJY3_15090 4bb1e0c340b28b38e2b372e5a8ecd313 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 8.2E-109 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VEJY3_15090 4bb1e0c340b28b38e2b372e5a8ecd313 393 SUPERFAMILY SSF48452 85 293 8.01E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_15090 4bb1e0c340b28b38e2b372e5a8ecd313 393 Pfam PF07219 HemY protein N-terminus 26 132 6.5E-27 T 14-10-2018 IPR010817 HemY, N-terminal VEJY3_15090 4bb1e0c340b28b38e2b372e5a8ecd313 393 SUPERFAMILY SSF48452 259 390 5.69E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 Gene3D G3DSA:2.60.40.10 716 817 3.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 Gene3D G3DSA:2.60.40.10 599 699 8.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 Pfam PF05548 Gametolysin peptidase M11 339 489 2.6E-10 T 14-10-2018 IPR008752 Peptidase M11, gametolysin VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 SUPERFAMILY SSF55486 294 448 3.44E-10 T 14-10-2018 VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 727 801 4.4E-7 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain VEJY3_19541 ac3b41d10d7014ece325935143daaff4 926 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 613 684 3.0E-9 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.539 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 Gene3D G3DSA:3.40.50.1980 30 229 8.8E-127 T 14-10-2018 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 5.5E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 Pfam PF00815 Histidinol dehydrogenase 27 424 4.7E-172 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 SUPERFAMILY SSF53720 4 424 1.2E-93 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 PIRSF PIRSF000099 1 427 2.7E-171 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEJY3_05560 48b953cd3d47cfe265d41f6c43a0dc6c 430 Gene3D G3DSA:3.40.50.1980 231 346 8.8E-127 T 14-10-2018 VEJY3_14060 fbff2f693bd021e1761689a3e0b66b74 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 1.0E-44 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VEJY3_14060 fbff2f693bd021e1761689a3e0b66b74 197 Gene3D G3DSA:3.30.70.60 92 197 5.6E-26 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VEJY3_14060 fbff2f693bd021e1761689a3e0b66b74 197 PIRSF PIRSF016482 1 197 1.0E-64 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 Gene3D G3DSA:1.10.3730.10 165 272 1.1E-33 T 14-10-2018 VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 SUPERFAMILY SSF51735 4 160 4.67E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 PIRSF PIRSF000193 3 270 2.7E-76 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.5E-25 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 Gene3D G3DSA:3.40.50.720 2 164 2.5E-51 T 14-10-2018 VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 2.3E-29 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 SUPERFAMILY SSF48179 163 270 1.7E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_13460 eaa239e83aff24fd584596f67617aacc 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.137 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 348 1.1E-61 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 Gene3D G3DSA:3.30.428.10 177 349 2.0E-65 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 Gene3D G3DSA:3.30.428.10 45 176 6.8E-56 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 SUPERFAMILY SSF54197 5 177 3.09E-73 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 177 1.2E-69 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 SUPERFAMILY SSF54197 180 347 1.09E-50 T 14-10-2018 IPR036265 HIT-like superfamily VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_24036 c873460b02181b21c41c21e7aaf64651 349 PIRSF PIRSF000808 1 343 2.6E-121 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEJY3_10820 4d7eeeac3ca9c0dfbe21f04575c9d8cb 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.656 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VEJY3_10820 4d7eeeac3ca9c0dfbe21f04575c9d8cb 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 6.9E-58 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 Gene3D G3DSA:4.10.430.10 92 135 6.5E-26 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 Pfam PF00816 H-NS histone family 33 129 3.8E-20 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 SMART SM00528 88 135 2.2E-25 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 SUPERFAMILY SSF81273 93 135 2.75E-12 T 14-10-2018 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 Gene3D G3DSA:1.10.287.1050 1 84 6.3E-29 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 SUPERFAMILY SSF81273 2 58 1.28E-16 T 14-10-2018 VEJY3_05535 e161695d23013ed7a9629633692fc055 135 PIRSF PIRSF002096 1 135 2.8E-55 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEJY3_19436 38f4fb600d03727c9f594e251a2adf5c 61 Gene3D G3DSA:3.10.20.440 1 61 3.2E-13 T 14-10-2018 VEJY3_19436 38f4fb600d03727c9f594e251a2adf5c 61 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 60 1.9E-18 T 14-10-2018 VEJY3_19436 38f4fb600d03727c9f594e251a2adf5c 61 SUPERFAMILY SSF54292 3 59 7.87E-13 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 203 384 5.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 Gene3D G3DSA:1.10.287.950 89 418 3.5E-68 T 14-10-2018 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 4.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 4.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 4.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 SMART SM00283 156 417 1.2E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEJY3_01905 82b76ba07037f739f49dbbca2e7d1af0 418 SUPERFAMILY SSF58104 109 418 2.09E-74 T 14-10-2018 VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 SMART SM00448 14 126 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 Gene3D G3DSA:3.40.1550.10 154 335 2.3E-20 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 SUPERFAMILY SSF103039 156 335 5.23E-28 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 Pfam PF00072 Response regulator receiver domain 16 122 3.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 Gene3D G3DSA:3.40.50.2300 10 134 1.1E-28 T 14-10-2018 VEJY3_07100 44e162b0029e4ad0a603a6b8e95596fd 337 SUPERFAMILY SSF52172 12 129 1.1E-28 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_10020 ef5bbf3e9d28043cb14bf3e5ed770732 213 SUPERFAMILY SSF56925 32 176 7.32E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_10020 ef5bbf3e9d28043cb14bf3e5ed770732 213 Gene3D G3DSA:2.40.160.20 30 213 1.2E-6 T 14-10-2018 VEJY3_16716 dbe0813dd3a4ce51606dec58376f4819 292 Gene3D G3DSA:1.10.30.40 8 63 5.0E-11 T 14-10-2018 VEJY3_16716 dbe0813dd3a4ce51606dec58376f4819 292 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 19 266 3.5E-88 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEJY3_16716 dbe0813dd3a4ce51606dec58376f4819 292 PIRSF PIRSF018982 6 276 2.9E-86 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEJY3_16716 dbe0813dd3a4ce51606dec58376f4819 292 Gene3D G3DSA:3.40.50.11240 80 265 4.0E-63 T 14-10-2018 VEJY3_00390 25c62bd7b1b77a39594602425bb332cd 467 Gene3D G3DSA:3.40.50.410 313 464 1.9E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_00390 25c62bd7b1b77a39594602425bb332cd 467 SUPERFAMILY SSF53300 126 442 6.53E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_05270 8980ebf162ba19143447b76670fcd7c9 567 Pfam PF00350 Dynamin family 95 178 1.9E-7 T 14-10-2018 IPR022812 Dynamin superfamily VEJY3_05270 8980ebf162ba19143447b76670fcd7c9 567 Gene3D G3DSA:3.40.50.300 1 279 1.8E-70 T 14-10-2018 VEJY3_05270 8980ebf162ba19143447b76670fcd7c9 567 SUPERFAMILY SSF52540 35 188 6.19E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 6.4E-44 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01300 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_19406 9264ab367c239eb381b456cf7893d921 283 SUPERFAMILY SSF51735 2 249 5.83E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19406 9264ab367c239eb381b456cf7893d921 283 Pfam PF05368 NmrA-like family 2 220 1.6E-24 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 VEJY3_19406 9264ab367c239eb381b456cf7893d921 283 Gene3D G3DSA:3.90.25.10 137 269 3.2E-85 T 14-10-2018 VEJY3_19406 9264ab367c239eb381b456cf7893d921 283 Gene3D G3DSA:3.40.50.720 3 268 3.2E-85 T 14-10-2018 VEJY3_04325 722fef4c8d138c0ba1f04581bd77eaf7 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 1.8E-35 T 14-10-2018 IPR023163 SMc04008-like domain VEJY3_04325 722fef4c8d138c0ba1f04581bd77eaf7 105 SUPERFAMILY SSF158757 8 85 1.57E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily VEJY3_04325 722fef4c8d138c0ba1f04581bd77eaf7 105 Gene3D G3DSA:1.10.3340.10 4 105 1.1E-45 T 14-10-2018 IPR036810 SMc04008-like superfamily VEJY3_22111 19bcb2ca501d07f6cae8b8295add5457 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_22111 19bcb2ca501d07f6cae8b8295add5457 308 SMART SM00382 30 212 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_22111 19bcb2ca501d07f6cae8b8295add5457 308 Gene3D G3DSA:3.40.50.300 1 243 2.6E-71 T 14-10-2018 VEJY3_22111 19bcb2ca501d07f6cae8b8295add5457 308 SUPERFAMILY SSF52540 4 227 1.52E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22111 19bcb2ca501d07f6cae8b8295add5457 308 Pfam PF00005 ABC transporter 22 165 4.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_15225 2b2b2637cc8478c956f05b9823566857 375 SUPERFAMILY SSF102114 37 366 9.81E-55 T 14-10-2018 VEJY3_15225 2b2b2637cc8478c956f05b9823566857 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.1E-26 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_15225 2b2b2637cc8478c956f05b9823566857 375 Gene3D G3DSA:3.20.20.70 8 368 3.7E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_15225 2b2b2637cc8478c956f05b9823566857 375 SMART SM00876 256 364 1.7E-35 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEJY3_15225 2b2b2637cc8478c956f05b9823566857 375 Pfam PF04055 Radical SAM superfamily 81 222 1.0E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEJY3_06775 1a6d4e90e5458f44b0c27653ff4351d7 175 Pfam PF02417 Chromate transporter 6 171 4.4E-30 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEJY3_08345 f3502d2c03cb51448f22d4622b045d75 141 SUPERFAMILY SSF55729 9 135 2.74E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_08345 f3502d2c03cb51448f22d4622b045d75 141 Gene3D G3DSA:3.40.630.30 3 139 8.8E-20 T 14-10-2018 VEJY3_08345 f3502d2c03cb51448f22d4622b045d75 141 Pfam PF13673 Acetyltransferase (GNAT) domain 53 130 9.9E-10 T 14-10-2018 IPR000182 GNAT domain VEJY3_19421 b8c2f89560f4e92bdc35e6b3a8f145f6 432 PIRSF PIRSF006066 2 432 3.1E-109 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_19421 b8c2f89560f4e92bdc35e6b3a8f145f6 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 418 1.6E-83 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_19421 b8c2f89560f4e92bdc35e6b3a8f145f6 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 427 2.9E-97 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_07535 cf9a977232a266e16e536c09f5dad434 188 Pfam PF10881 Protein of unknown function (DUF2726) 60 147 1.6E-18 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 VEJY3_18321 6a1d92aec27f0eedabc3008c94506d9f 267 Hamap MF_00055 MEMO1 family protein . 2 267 46.133 T 14-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 VEJY3_18321 6a1d92aec27f0eedabc3008c94506d9f 267 Pfam PF01875 Memo-like protein 5 247 5.4E-52 T 14-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 VEJY3_18321 6a1d92aec27f0eedabc3008c94506d9f 267 Gene3D G3DSA:3.40.830.10 2 267 7.4E-62 T 14-10-2018 VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 Pfam PF00106 short chain dehydrogenase 6 191 5.5E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 Gene3D G3DSA:3.40.50.720 2 276 1.1E-77 T 14-10-2018 VEJY3_17831 ee67bc7bbd972a0c113b67c151fe38ae 276 SUPERFAMILY SSF51735 2 234 9.55E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_12800 5c770d140f67d97c7e7641713f510baa 361 Pfam PF01594 AI-2E family transporter 14 347 1.3E-52 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VEJY3_08240 c7d1a5421a980a4d8172519cd297192b 144 Pfam PF06127 Protein of unknown function (DUF962) 1 141 9.4E-20 T 14-10-2018 IPR009305 Protein of unknown function DUF962 VEJY3_13125 425a14eb8337c089f2322d4234f4b99c 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 5.7E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEJY3_13125 425a14eb8337c089f2322d4234f4b99c 376 PIRSF PIRSF015658 1 376 1.7E-178 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEJY3_22306 eeee79c35855398a8b1d0970df2cdffd 78 Pfam PF13192 Thioredoxin domain 4 76 5.8E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold VEJY3_22306 eeee79c35855398a8b1d0970df2cdffd 78 Gene3D G3DSA:3.40.30.10 1 76 4.9E-27 T 14-10-2018 VEJY3_22306 eeee79c35855398a8b1d0970df2cdffd 78 PIRSF PIRSF037031 1 78 1.5E-30 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 VEJY3_22306 eeee79c35855398a8b1d0970df2cdffd 78 SUPERFAMILY SSF52833 2 76 6.94E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10900 ab965fbff520e3c96d697a0a876623b7 114 SUPERFAMILY SSF47226 2 112 8.64E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_10900 ab965fbff520e3c96d697a0a876623b7 114 Pfam PF01627 Hpt domain 26 103 3.1E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_10900 ab965fbff520e3c96d697a0a876623b7 114 Gene3D G3DSA:1.20.120.160 1 114 2.7E-25 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_18961 2566d0788383370064cbcb70752aa652 292 Gene3D G3DSA:3.40.50.2300 29 278 1.1E-97 T 14-10-2018 VEJY3_18961 2566d0788383370064cbcb70752aa652 292 SUPERFAMILY SSF53822 6 292 5.27E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_18961 2566d0788383370064cbcb70752aa652 292 Pfam PF13407 Periplasmic binding protein domain 28 278 1.7E-60 T 14-10-2018 IPR025997 Periplasmic binding protein VEJY3_18961 2566d0788383370064cbcb70752aa652 292 Gene3D G3DSA:3.40.50.2300 125 259 1.1E-97 T 14-10-2018 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 SUPERFAMILY SSF55811 1 127 8.8E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 Pfam PF00293 NUDIX domain 7 125 4.2E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 Gene3D G3DSA:3.90.79.10 1 132 4.7E-42 T 14-10-2018 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 PRINTS PR00502 NUDIX hydrolase family signature 34 48 8.9E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEJY3_02120 da6f00b00ef1572563c88eb24604f186 133 PRINTS PR00502 NUDIX hydrolase family signature 48 63 8.9E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEJY3_22041 a90fcdeb09e308a9684aec17e4433bb4 110 SUPERFAMILY SSF51316 2 109 3.35E-24 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_22041 a90fcdeb09e308a9684aec17e4433bb4 110 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 5 94 1.7E-19 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_22041 a90fcdeb09e308a9684aec17e4433bb4 110 Gene3D G3DSA:3.90.1590.10 1 93 2.8E-6 T 14-10-2018 VEJY3_20636 e4abff08c7000f6992f4efb67e16b5f8 281 SUPERFAMILY SSF52096 16 275 7.26E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20636 e4abff08c7000f6992f4efb67e16b5f8 281 Gene3D G3DSA:3.90.226.10 14 215 3.0E-59 T 14-10-2018 VEJY3_20636 e4abff08c7000f6992f4efb67e16b5f8 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 3.8E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_20636 e4abff08c7000f6992f4efb67e16b5f8 281 Gene3D G3DSA:1.10.12.10 217 280 6.3E-24 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEJY3_10915 2c87920732eb14e974f2122d48c66716 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.192 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VEJY3_10915 2c87920732eb14e974f2122d48c66716 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.9E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_10915 2c87920732eb14e974f2122d48c66716 192 PIRSF PIRSF006102 1 192 2.5E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_10915 2c87920732eb14e974f2122d48c66716 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.6E-89 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VEJY3_21321 98ffac0d73522ded332d2d6c6f8153da 241 SUPERFAMILY SSF53098 46 221 1.72E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_21321 98ffac0d73522ded332d2d6c6f8153da 241 SMART SM00479 51 223 1.5E-16 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_21321 98ffac0d73522ded332d2d6c6f8153da 241 Pfam PF00929 Exonuclease 53 213 1.1E-11 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEJY3_21321 98ffac0d73522ded332d2d6c6f8153da 241 Gene3D G3DSA:3.30.420.10 49 225 1.3E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_21026 c2af9b2cd1cb53afd4eda483c0dd4b6a 215 Gene3D G3DSA:1.20.120.520 72 215 8.3E-23 T 14-10-2018 VEJY3_21026 c2af9b2cd1cb53afd4eda483c0dd4b6a 215 Pfam PF01814 Hemerythrin HHE cation binding domain 81 213 8.0E-19 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VEJY3_22996 a36e3d0bc37bfa84f9333baa15669950 140 SUPERFAMILY SSF49764 12 139 1.44E-36 T 14-10-2018 IPR008978 HSP20-like chaperone VEJY3_22996 a36e3d0bc37bfa84f9333baa15669950 140 Gene3D G3DSA:2.60.40.790 3 139 5.3E-37 T 14-10-2018 IPR008978 HSP20-like chaperone VEJY3_22996 a36e3d0bc37bfa84f9333baa15669950 140 Pfam PF00011 Hsp20/alpha crystallin family 37 139 4.4E-24 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VEJY3_14925 7d4fc90479db0a61571eedd396e94eb4 322 PIRSF PIRSF003097 25 318 4.3E-60 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VEJY3_00765 53a2d23f89a8687ed5693c6b24869e6d 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 132 4.9E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEJY3_00765 53a2d23f89a8687ed5693c6b24869e6d 135 Gene3D G3DSA:3.30.420.270 61 129 7.2E-10 T 14-10-2018 VEJY3_09530 b5b61b964d7ececf1b076d518081b22b 589 Gene3D G3DSA:1.20.1730.10 23 579 7.0E-118 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_09530 b5b61b964d7ececf1b076d518081b22b 589 Pfam PF00474 Sodium:solute symporter family 35 442 1.5E-49 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_12975 4a36948ee3caafc3f4f278997704f547 556 Gene3D G3DSA:3.30.750.24 428 550 1.9E-14 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_12975 4a36948ee3caafc3f4f278997704f547 556 Pfam PF00916 Sulfate permease family 11 376 2.1E-85 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEJY3_12975 4a36948ee3caafc3f4f278997704f547 556 SUPERFAMILY SSF52091 439 541 1.63E-11 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_12975 4a36948ee3caafc3f4f278997704f547 556 Pfam PF01740 STAS domain 440 532 7.1E-12 T 14-10-2018 IPR002645 STAS domain VEJY3_11035 5f7676749c154823a80248e20cd65c55 430 Pfam PF01627 Hpt domain 334 410 1.7E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_11035 5f7676749c154823a80248e20cd65c55 430 Gene3D G3DSA:1.20.120.160 310 423 9.3E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_11035 5f7676749c154823a80248e20cd65c55 430 SUPERFAMILY SSF47226 301 419 4.45E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_22426 1f6102bf24744fe1f1e459f660a00149 199 Gene3D G3DSA:3.80.10.10 23 195 4.6E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VEJY3_19321 f724cab16667b089d87f9bd8db5eb114 530 SUPERFAMILY SSF53850 45 524 6.88E-100 T 14-10-2018 VEJY3_19321 f724cab16667b089d87f9bd8db5eb114 530 Gene3D G3DSA:3.40.190.10 50 284 4.2E-51 T 14-10-2018 VEJY3_19321 f724cab16667b089d87f9bd8db5eb114 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 422 1.1E-65 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VEJY3_19321 f724cab16667b089d87f9bd8db5eb114 530 Gene3D G3DSA:3.10.105.10 285 498 1.5E-38 T 14-10-2018 VEJY3_19321 f724cab16667b089d87f9bd8db5eb114 530 PIRSF PIRSF002741 7 529 7.5E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEJY3_07725 202d39c1eb63fa0dd42a8831721db2f8 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEJY3_07725 202d39c1eb63fa0dd42a8831721db2f8 90 SUPERFAMILY SSF54975 4 89 1.96E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEJY3_07725 202d39c1eb63fa0dd42a8831721db2f8 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEJY3_07725 202d39c1eb63fa0dd42a8831721db2f8 90 Pfam PF00708 Acylphosphatase 7 89 9.7E-25 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEJY3_07725 202d39c1eb63fa0dd42a8831721db2f8 90 Gene3D G3DSA:3.30.70.100 1 90 3.4E-30 T 14-10-2018 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 SMART SM00028 75 108 0.065 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 SMART SM00028 109 142 5.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 SMART SM00028 246 279 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 SUPERFAMILY SSF48452 42 294 3.8E-60 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 Pfam PF13181 Tetratricopeptide repeat 247 276 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 Pfam PF13181 Tetratricopeptide repeat 75 107 0.0086 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 Pfam PF13181 Tetratricopeptide repeat 110 142 0.0025 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_06570 1e9d02b4e192d58247ac9e29fe4d8baa 313 Gene3D G3DSA:1.25.40.10 34 305 7.7E-77 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_07060 c67de3d08be27cd9f801510ff398737f 527 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 75 522 1.4E-136 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_07060 c67de3d08be27cd9f801510ff398737f 527 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 34 521 1.5E-172 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_07060 c67de3d08be27cd9f801510ff398737f 527 ProSitePatterns PS01303 BCCT family of transporters signature. 337 346 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VEJY3_19866 fe711f4be0af8c79ebcdd0fd87594157 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.4E-61 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_19866 fe711f4be0af8c79ebcdd0fd87594157 339 SUPERFAMILY SSF51735 1 335 2.67E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19866 fe711f4be0af8c79ebcdd0fd87594157 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.1E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VEJY3_19866 fe711f4be0af8c79ebcdd0fd87594157 339 Gene3D G3DSA:3.90.25.10 193 328 4.2E-142 T 14-10-2018 VEJY3_19866 fe711f4be0af8c79ebcdd0fd87594157 339 Gene3D G3DSA:3.40.50.720 3 273 4.2E-142 T 14-10-2018 VEJY3_00465 36ed85e8a16f32070b117bd727062b33 400 Pfam PF00999 Sodium/hydrogen exchanger family 12 393 4.2E-37 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_20641 fa2cf6298acb77893b947124267ac87a 300 Pfam PF00682 HMGL-like 6 276 1.4E-50 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_20641 fa2cf6298acb77893b947124267ac87a 300 Gene3D G3DSA:3.20.20.70 1 299 4.4E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_20641 fa2cf6298acb77893b947124267ac87a 300 SUPERFAMILY SSF51569 1 296 1.06E-73 T 14-10-2018 VEJY3_20641 fa2cf6298acb77893b947124267ac87a 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 SUPERFAMILY SSF46785 4 89 8.71E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 Gene3D G3DSA:3.40.190.290 93 284 1.0E-37 T 14-10-2018 VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 SUPERFAMILY SSF53850 89 286 3.1E-31 T 14-10-2018 VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 Pfam PF03466 LysR substrate binding domain 89 285 9.8E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_10385 8d1a4da77c10ce13f8e01f3159370b7a 286 Gene3D G3DSA:1.10.10.10 3 92 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.3E-12 T 14-10-2018 VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 SUPERFAMILY SSF52833 31 150 3.2E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 Gene3D G3DSA:1.20.1050.10 171 316 1.8E-71 T 14-10-2018 VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 PIRSF PIRSF015753 5 312 4.6E-136 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 Gene3D G3DSA:3.40.30.130 1 170 9.2E-67 T 14-10-2018 VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 SUPERFAMILY SSF47616 163 313 1.32E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_10840 2f891a2ec89137c042bafe159e312278 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.1E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_06575 9310a655dac2d741aa29780a66a17ae3 113 Pfam PF11777 Protein of unknown function (DUF3316) 2 107 6.0E-10 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEJY3_04775 8165866a2592e0d1bde0fbe06914eb12 230 Pfam PF09335 SNARE associated Golgi protein 66 181 4.7E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein VEJY3_16001 3b70f3fcc7998a5e2757f27d6bd0bdab 365 SUPERFAMILY SSF55073 222 363 1.57E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_16001 3b70f3fcc7998a5e2757f27d6bd0bdab 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 363 4.1E-34 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16001 3b70f3fcc7998a5e2757f27d6bd0bdab 365 SMART SM00267 205 365 1.5E-29 T 14-10-2018 IPR000160 GGDEF domain VEJY3_16001 3b70f3fcc7998a5e2757f27d6bd0bdab 365 Gene3D G3DSA:3.30.70.270 213 365 1.2E-39 T 14-10-2018 VEJY3_13540 8b51abae350e8c3c1790bf4fe6168e55 312 Gene3D G3DSA:1.20.1530.20 1 307 5.3E-104 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VEJY3_13540 8b51abae350e8c3c1790bf4fe6168e55 312 Pfam PF01758 Sodium Bile acid symporter family 36 212 7.4E-36 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 SUPERFAMILY SSF118215 15 403 1.83E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 2.6E-45 T 14-10-2018 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.6E-118 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEJY3_10295 f28181b43eca7bb1f919b3b9d3a94cdc 422 Gene3D G3DSA:1.10.3860.10 2 421 2.1E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 Pfam PF00561 alpha/beta hydrolase fold 5 109 4.0E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 Gene3D G3DSA:3.40.50.1820 3 242 3.8E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 31 46 3.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 3.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 86 3.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_23871 c016b8d1e9184d6cb7dac47ff7b54b1c 250 SUPERFAMILY SSF53474 3 241 1.11E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_22221 45af60e876953147cbda6e086d55e3dd 433 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 421 1.4E-27 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain VEJY3_22221 45af60e876953147cbda6e086d55e3dd 433 SUPERFAMILY SSF142764 10 428 3.14E-77 T 14-10-2018 VEJY3_22221 45af60e876953147cbda6e086d55e3dd 433 Pfam PF07005 Putative sugar-binding N-terminal domain 10 229 2.9E-48 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain VEJY3_22221 45af60e876953147cbda6e086d55e3dd 433 Gene3D G3DSA:3.40.50.10840 9 235 1.9E-52 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily VEJY3_22221 45af60e876953147cbda6e086d55e3dd 433 Gene3D G3DSA:3.40.980.20 240 430 2.5E-23 T 14-10-2018 VEJY3_21341 453010be6a275069fd2c05e86039526a 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 294 2.2E-118 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 VEJY3_21341 453010be6a275069fd2c05e86039526a 298 Gene3D G3DSA:3.20.20.150 2 295 3.2E-79 T 14-10-2018 VEJY3_21341 453010be6a275069fd2c05e86039526a 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 53.285 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 VEJY3_21341 453010be6a275069fd2c05e86039526a 298 Pfam PF01261 Xylose isomerase-like TIM barrel 36 248 1.8E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_21341 453010be6a275069fd2c05e86039526a 298 SUPERFAMILY SSF51658 7 296 1.93E-58 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08635 5c1c1c544e1e11b75fa51d2f024a6f86 246 Pfam PF01925 Sulfite exporter TauE/SafE 15 240 3.8E-28 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 Gene3D G3DSA:2.20.150.10 15 110 1.7E-90 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 326 634 2.1E-136 T 14-10-2018 IPR018659 Protein of unknown function DUF2090 VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 SUPERFAMILY SSF53613 6 330 2.18E-71 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 Pfam PF00294 pfkB family carbohydrate kinase 8 323 3.9E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 Gene3D G3DSA:3.20.20.70 343 635 2.9E-47 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_08615 5c8bf0b68422a812b7c3a4f7b94bcaea 635 Gene3D G3DSA:3.40.1190.20 10 313 1.7E-90 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_22321 c64d13564adc3a313537ba368a090d19 696 Pfam PF00999 Sodium/hydrogen exchanger family 15 410 1.1E-59 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_01125 b2bfff2173221a2fc634a39bf385d2b1 318 SUPERFAMILY SSF53448 10 264 3.56E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01125 b2bfff2173221a2fc634a39bf385d2b1 318 Pfam PF00535 Glycosyl transferase family 2 11 173 4.8E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_01125 b2bfff2173221a2fc634a39bf385d2b1 318 Gene3D G3DSA:3.90.550.10 1 222 2.7E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_21756 09e98a7a8a251ecafd7a1bfb98741652 328 SMART SM00833 241 324 0.0023 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VEJY3_21756 09e98a7a8a251ecafd7a1bfb98741652 328 Gene3D G3DSA:3.40.50.300 2 197 2.2E-46 T 14-10-2018 VEJY3_21756 09e98a7a8a251ecafd7a1bfb98741652 328 SUPERFAMILY SSF52540 4 169 4.69E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21756 09e98a7a8a251ecafd7a1bfb98741652 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 1.3E-43 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VEJY3_08685 52ce073acbb81c466a5cf1dae20f8f99 267 PIRSF PIRSF036778 1 267 3.4E-100 T 14-10-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type VEJY3_08685 52ce073acbb81c466a5cf1dae20f8f99 267 Pfam PF01261 Xylose isomerase-like TIM barrel 24 193 5.1E-15 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_08685 52ce073acbb81c466a5cf1dae20f8f99 267 SUPERFAMILY SSF51658 2 264 9.69E-62 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08685 52ce073acbb81c466a5cf1dae20f8f99 267 Gene3D G3DSA:3.20.20.150 2 265 9.9E-58 T 14-10-2018 VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 Gene3D G3DSA:1.20.81.30 259 370 9.6E-28 T 14-10-2018 VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 Gene3D G3DSA:1.20.81.30 58 174 5.7E-28 T 14-10-2018 VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.4E-18 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.4E-18 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.4E-18 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.4E-18 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.8E-30 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_13035 97150c3a95b89c3596bbd564e07a3b36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 2.8E-27 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_15155 8c889c096c6e16fc09bc5c55928397d9 304 Pfam PF00892 EamA-like transporter family 12 145 1.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_15155 8c889c096c6e16fc09bc5c55928397d9 304 SUPERFAMILY SSF103481 49 145 1.96E-13 T 14-10-2018 VEJY3_15155 8c889c096c6e16fc09bc5c55928397d9 304 SUPERFAMILY SSF103481 190 291 5.49E-8 T 14-10-2018 VEJY3_15155 8c889c096c6e16fc09bc5c55928397d9 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 1.8E-87 T 14-10-2018 IPR004626 RarD protein GO:0005887 VEJY3_06600 2f4fcf914e6f00c3b19eb1c640024ea8 105 SUPERFAMILY SSF50022 1 103 1.19E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_06600 2f4fcf914e6f00c3b19eb1c640024ea8 105 Gene3D G3DSA:2.102.10.10 1 105 4.1E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_06600 2f4fcf914e6f00c3b19eb1c640024ea8 105 Pfam PF00355 Rieske [2Fe-2S] domain 4 89 1.3E-16 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 1.7E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 Gene3D G3DSA:3.40.50.1820 7 265 5.1E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 2.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 2.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 2.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEJY3_04765 5397b8b09f06a7d9358c734b4a3659f4 267 SUPERFAMILY SSF53474 14 261 6.33E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_20921 957bd96fbb6661cbf5271eb9e7e71b50 127 SUPERFAMILY SSF54593 3 122 3.03E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_20921 957bd96fbb6661cbf5271eb9e7e71b50 127 Gene3D G3DSA:3.10.180.10 7 126 1.8E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_20921 957bd96fbb6661cbf5271eb9e7e71b50 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 1.3E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_03980 65ac87246b7c3163cd2ff7e9266c77b3 270 PIRSF PIRSF003092 1 270 2.0E-92 T 14-10-2018 IPR025501 ATP binding protein MinD VEJY3_03980 65ac87246b7c3163cd2ff7e9266c77b3 270 Gene3D G3DSA:3.40.50.300 1 260 1.2E-71 T 14-10-2018 VEJY3_03980 65ac87246b7c3163cd2ff7e9266c77b3 270 SUPERFAMILY SSF52540 1 268 5.0E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03980 65ac87246b7c3163cd2ff7e9266c77b3 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 7.6E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VEJY3_08965 b6e395ecece6ccf9bfb78d23a256165e 107 Gene3D G3DSA:3.40.50.2300 1 106 1.5E-39 T 14-10-2018 VEJY3_08965 b6e395ecece6ccf9bfb78d23a256165e 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 1.7E-20 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEJY3_08965 b6e395ecece6ccf9bfb78d23a256165e 107 SUPERFAMILY SSF52794 4 101 7.15E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEJY3_13725 69d0d11cbb228aae6e9f80b5f50ec3d7 447 Gene3D G3DSA:3.30.2290.10 7 232 2.6E-83 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEJY3_13725 69d0d11cbb228aae6e9f80b5f50ec3d7 447 SUPERFAMILY SSF111283 12 447 6.02E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEJY3_13725 69d0d11cbb228aae6e9f80b5f50ec3d7 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 7.2E-60 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEJY3_03545 df5017c2597372a80337737b6d3fd21c 131 PIRSF PIRSF002889 1 131 3.1E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEJY3_03545 df5017c2597372a80337737b6d3fd21c 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.2E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 SUPERFAMILY SSF51161 90 323 7.35E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 7.5E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Gene3D G3DSA:3.30.60.70 131 171 2.3E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Gene3D G3DSA:3.30.70.2010 1 130 2.8E-39 T 14-10-2018 VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.0 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.0E-12 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_12375 3a41a0774198b368c24afbef597051ab 343 Gene3D G3DSA:2.160.10.10 172 343 4.9E-70 T 14-10-2018 VEJY3_21266 79ddd29c11695c988381813b4bd5eed8 199 SUPERFAMILY SSF159594 45 196 2.48E-22 T 14-10-2018 VEJY3_21266 79ddd29c11695c988381813b4bd5eed8 199 Gene3D G3DSA:3.40.50.10610 26 195 3.3E-13 T 14-10-2018 VEJY3_05915 e85371f64a3eb0eb0f497db32e232312 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 3.2E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_05915 e85371f64a3eb0eb0f497db32e232312 458 PIRSF PIRSF006603 10 458 8.9E-67 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_05915 e85371f64a3eb0eb0f497db32e232312 458 Pfam PF01554 MatE 252 413 5.8E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_05915 e85371f64a3eb0eb0f497db32e232312 458 Pfam PF01554 MatE 25 185 3.3E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_00525 e7d7523ed89eea0fc9b67b8ce7a302fe 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 8.4E-91 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VEJY3_00525 e7d7523ed89eea0fc9b67b8ce7a302fe 334 Gene3D G3DSA:3.20.20.140 1 334 3.1E-97 T 14-10-2018 VEJY3_00525 e7d7523ed89eea0fc9b67b8ce7a302fe 334 SUPERFAMILY SSF51556 3 325 1.32E-76 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_00525 e7d7523ed89eea0fc9b67b8ce7a302fe 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.145 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VEJY3_09860 777f318c13d6ea5e5c9a678c15b14757 169 Pfam PF06892 Phage regulatory protein CII (CP76) 8 158 6.6E-17 T 14-10-2018 IPR009679 Bacteriophage 186, CII VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 382 1.6E-75 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_22066 79b855ae4c0a2476bfee94f049a8474a 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 2.3E-36 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 SUPERFAMILY SSF52833 122 261 4.79E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 4.5E-13 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 Pfam PF13098 Thioredoxin-like domain 131 258 3.2E-22 T 14-10-2018 IPR012336 Thioredoxin-like fold VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 Gene3D G3DSA:3.40.30.10 103 262 2.5E-42 T 14-10-2018 VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 SUPERFAMILY SSF54423 44 100 3.66E-14 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VEJY3_02305 a2ec162ae63af5e678ac472db35dff3d 262 Gene3D G3DSA:3.10.450.70 38 102 1.0E-18 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 5.1E-71 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 SUPERFAMILY SSF52218 4 172 1.51E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 Pfam PF00258 Flavodoxin 6 162 1.9E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 Gene3D G3DSA:3.40.50.360 3 176 4.5E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_03795 11186afc66bc669f4fc0b64df8126d69 177 PIRSF PIRSF038996 1 174 3.2E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 Gene3D G3DSA:3.90.25.10 193 334 1.6E-114 T 14-10-2018 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 263 1.5E-56 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 SUPERFAMILY SSF51735 1 336 1.64E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 3.3E-7 T 14-10-2018 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 PRINTS PR01713 Nucleotide sugar epimerase signature 301 318 3.3E-7 T 14-10-2018 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 3.3E-7 T 14-10-2018 VEJY3_01095 df1f5d674d93fdbc7adb8a7484b8a9ae 340 Gene3D G3DSA:3.40.50.720 19 322 1.6E-114 T 14-10-2018 VEJY3_16106 22684e8c8092240a582b2e4d30f8b3a7 171 Gene3D G3DSA:3.40.220.10 1 171 4.8E-58 T 14-10-2018 VEJY3_16106 22684e8c8092240a582b2e4d30f8b3a7 171 Pfam PF01661 Macro domain 20 136 1.1E-36 T 14-10-2018 IPR002589 Macro domain VEJY3_16106 22684e8c8092240a582b2e4d30f8b3a7 171 SUPERFAMILY SSF52949 4 168 2.52E-51 T 14-10-2018 VEJY3_16106 22684e8c8092240a582b2e4d30f8b3a7 171 SMART SM00506 3 136 8.5E-42 T 14-10-2018 IPR002589 Macro domain VEJY3_20261 a1ea1af7be485d4b20cedb12988244e9 523 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 146 242 7.3E-21 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 VEJY3_20261 a1ea1af7be485d4b20cedb12988244e9 523 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 5 136 1.5E-10 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 VEJY3_11150 601596eea6b6959ddcc18c01683cb4b0 179 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 54 177 37.495 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEJY3_11150 601596eea6b6959ddcc18c01683cb4b0 179 Pfam PF01641 SelR domain 58 175 2.8E-53 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEJY3_11150 601596eea6b6959ddcc18c01683cb4b0 179 Gene3D G3DSA:2.170.150.20 35 179 1.7E-60 T 14-10-2018 VEJY3_11150 601596eea6b6959ddcc18c01683cb4b0 179 SUPERFAMILY SSF51316 51 178 6.28E-58 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_05950 c2a376f9dd539fcba9c0389ae8cd7bbd 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.1E-113 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_05950 c2a376f9dd539fcba9c0389ae8cd7bbd 400 Gene3D G3DSA:3.40.50.720 1 399 2.3E-181 T 14-10-2018 VEJY3_05950 c2a376f9dd539fcba9c0389ae8cd7bbd 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 4.5E-31 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_05950 c2a376f9dd539fcba9c0389ae8cd7bbd 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_05950 c2a376f9dd539fcba9c0389ae8cd7bbd 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.364 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 SUPERFAMILY SSF116726 291 349 1.06E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 Pfam PF02080 TrkA-C domain 293 349 2.8E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 Pfam PF02080 TrkA-C domain 209 276 3.9E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 Gene3D G3DSA:3.30.70.1450 290 359 1.8E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 Gene3D G3DSA:3.30.70.1450 206 279 1.3E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 SUPERFAMILY SSF116726 206 282 1.57E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEJY3_01465 7b0d29f47d4d8157c9f1c4c009da3305 574 Pfam PF03600 Citrate transporter 30 518 4.5E-31 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VEJY3_06005 760a717f2c954d3f695b2b3c67a1cfea 165 SUPERFAMILY SSF52172 1 141 7.97E-20 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_06005 760a717f2c954d3f695b2b3c67a1cfea 165 Gene3D G3DSA:3.40.50.2300 3 144 3.1E-17 T 14-10-2018 VEJY3_06005 760a717f2c954d3f695b2b3c67a1cfea 165 SMART SM00448 4 125 8.1E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_06005 760a717f2c954d3f695b2b3c67a1cfea 165 Pfam PF00072 Response regulator receiver domain 6 125 6.6E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 Pfam PF13407 Periplasmic binding protein domain 62 312 1.9E-36 T 14-10-2018 IPR025997 Periplasmic binding protein VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 Gene3D G3DSA:3.40.50.2300 164 335 1.0E-42 T 14-10-2018 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 SUPERFAMILY SSF53822 58 318 1.12E-34 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 Gene3D G3DSA:1.10.260.40 1 46 1.5E-11 T 14-10-2018 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 SMART SM00354 3 56 4.5E-4 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 46 2.8E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 Gene3D G3DSA:3.40.50.2300 68 326 1.0E-42 T 14-10-2018 VEJY3_08690 3781bd9770eae07eccaa1ead53948611 336 SUPERFAMILY SSF47413 2 46 9.19E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_08760 e94c64dcc7d4a216148fe47fbdfef59d 371 Pfam PF13692 Glycosyl transferases group 1 229 340 9.1E-9 T 14-10-2018 VEJY3_08760 e94c64dcc7d4a216148fe47fbdfef59d 371 Gene3D G3DSA:3.40.50.11010 128 202 2.7E-5 T 14-10-2018 VEJY3_08760 e94c64dcc7d4a216148fe47fbdfef59d 371 Gene3D G3DSA:3.40.50.2000 203 352 1.1E-35 T 14-10-2018 VEJY3_08760 e94c64dcc7d4a216148fe47fbdfef59d 371 SUPERFAMILY SSF53756 72 355 6.8E-20 T 14-10-2018 VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 Gene3D G3DSA:1.10.10.10 1 82 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 SUPERFAMILY SSF53850 91 279 9.77E-15 T 14-10-2018 VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 SUPERFAMILY SSF46785 1 81 6.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 Pfam PF03466 LysR substrate binding domain 124 277 2.0E-9 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_15896 e9c9edadd3a287725db47aa7d66b3c2c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_00830 2446285f9e00e1c71d64ef31f6a06c43 654 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 131 540 1.3E-8 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VEJY3_23586 91d0b11624b2d2e9360edf5bb13ed948 285 SUPERFAMILY SSF103481 178 279 5.1E-9 T 14-10-2018 VEJY3_23586 91d0b11624b2d2e9360edf5bb13ed948 285 Pfam PF00892 EamA-like transporter family 145 275 9.1E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_23586 91d0b11624b2d2e9360edf5bb13ed948 285 SUPERFAMILY SSF103481 38 139 4.18E-8 T 14-10-2018 VEJY3_15355 db706759632443a7a4c9f38d6903555e 270 Pfam PF07070 SpoOM protein 4 219 1.1E-74 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 4.3E-76 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 Gene3D G3DSA:3.40.50.10300 187 399 3.8E-83 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 SUPERFAMILY SSF52507 1 182 4.45E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 Gene3D G3DSA:3.40.50.1950 1 186 4.1E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 Pfam PF02441 Flavoprotein 7 179 3.2E-42 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VEJY3_00860 8fe71e72e82db714620410dd81f08790 399 SUPERFAMILY SSF102645 184 397 1.44E-79 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 SUPERFAMILY SSF51569 3 202 1.81E-67 T 14-10-2018 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 Gene3D G3DSA:3.20.20.70 1 204 4.6E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 Pfam PF01081 KDPG and KHG aldolase 5 195 5.0E-74 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_00255 57821a4cadd2e09f2060321752b42de1 204 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 7.0E-84 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 Gene3D G3DSA:3.40.50.300 1 139 1.1E-48 T 14-10-2018 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 SUPERFAMILY SSF48019 211 331 1.21E-31 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 3.2E-46 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 Gene3D G3DSA:1.20.272.10 213 337 2.5E-38 T 14-10-2018 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 SUPERFAMILY SSF52540 1 208 5.31E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.1E-31 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_03335 bbd86f0f93135cfe0cad330cc0d05c31 339 Gene3D G3DSA:1.10.8.60 143 212 5.4E-20 T 14-10-2018 VEJY3_20971 bf56967344f0af65900ebbe754861ec4 109 Gene3D G3DSA:3.30.420.10 7 107 6.0E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_20971 bf56967344f0af65900ebbe754861ec4 109 SUPERFAMILY SSF53098 17 103 2.88E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 SUPERFAMILY SSF53067 86 395 3.65E-55 T 14-10-2018 VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 Pfam PF00480 ROK family 88 389 4.6E-69 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 Gene3D G3DSA:1.10.10.10 2 81 3.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 Gene3D G3DSA:3.30.420.40 91 387 1.1E-109 T 14-10-2018 VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 Gene3D G3DSA:3.30.420.40 208 377 1.1E-109 T 14-10-2018 VEJY3_10595 0889577b3ab928705b055984ee39ba46 405 SUPERFAMILY SSF46785 10 76 2.73E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16181 e2d02b109566258982ebb13104d89dd8 204 Gene3D G3DSA:3.20.20.70 1 204 1.6E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_16181 e2d02b109566258982ebb13104d89dd8 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 26.263 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16181 e2d02b109566258982ebb13104d89dd8 204 SUPERFAMILY SSF51391 3 202 3.01E-64 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_16181 e2d02b109566258982ebb13104d89dd8 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 1.4E-62 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 208 357 1.9E-17 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 Gene3D G3DSA:3.30.70.270 190 365 6.5E-20 T 14-10-2018 VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 SUPERFAMILY SSF55073 211 359 5.73E-21 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 SMART SM00267 195 365 6.0E-8 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 Pfam PF00563 EAL domain 381 614 1.7E-65 T 14-10-2018 IPR001633 EAL domain VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 310 1.2E-15 T 14-10-2018 IPR000160 GGDEF domain VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 SUPERFAMILY SSF141868 382 627 2.09E-76 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 SMART SM00052 375 619 6.3E-80 T 14-10-2018 IPR001633 EAL domain VEJY3_07805 d86564154f7c352e6e560a1e9806a947 645 Gene3D G3DSA:3.20.20.450 366 621 1.1E-81 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_10320 fe6b30613ce696a3f798dab63997a46c 131 SUPERFAMILY SSF54637 9 129 8.82E-37 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_10320 fe6b30613ce696a3f798dab63997a46c 131 Gene3D G3DSA:3.10.129.10 1 131 5.1E-38 T 14-10-2018 VEJY3_10320 fe6b30613ce696a3f798dab63997a46c 131 Pfam PF03061 Thioesterase superfamily 26 98 4.0E-19 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_10090 2c3a14c34722aceabe0537df8c8774e5 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 182 3.1E-66 T 14-10-2018 IPR010275 Protein of unknown function DUF882 VEJY3_10090 2c3a14c34722aceabe0537df8c8774e5 182 Gene3D G3DSA:3.30.1380.10 64 182 1.9E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_10090 2c3a14c34722aceabe0537df8c8774e5 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 1.7E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEJY3_10090 2c3a14c34722aceabe0537df8c8774e5 182 SUPERFAMILY SSF55166 58 182 9.94E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_23336 6ee6a21eff71c1b1fd3ffd858d5291e7 273 SUPERFAMILY SSF53850 16 272 9.51E-71 T 14-10-2018 VEJY3_23336 6ee6a21eff71c1b1fd3ffd858d5291e7 273 Gene3D G3DSA:3.40.190.10 30 270 7.3E-81 T 14-10-2018 VEJY3_23336 6ee6a21eff71c1b1fd3ffd858d5291e7 273 Pfam PF12849 PBP superfamily domain 23 258 2.7E-39 T 14-10-2018 IPR024370 PBP domain VEJY3_23336 6ee6a21eff71c1b1fd3ffd858d5291e7 273 Gene3D G3DSA:3.40.190.10 99 233 7.3E-81 T 14-10-2018 VEJY3_14185 f796df255e3225afec4d26773e51f01f 118 SUPERFAMILY SSF75169 3 118 4.45E-36 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_14185 f796df255e3225afec4d26773e51f01f 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.3E-24 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VEJY3_14185 f796df255e3225afec4d26773e51f01f 118 Gene3D G3DSA:3.40.1260.10 1 118 2.4E-38 T 14-10-2018 IPR027396 DsrEFH-like VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 PIRSF PIRSF005962 15 398 4.8E-118 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 SUPERFAMILY SSF53187 19 395 6.6E-84 T 14-10-2018 VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 Gene3D G3DSA:3.30.70.360 188 302 4.4E-128 T 14-10-2018 VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 Pfam PF01546 Peptidase family M20/M25/M40 80 392 6.7E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 Pfam PF07687 Peptidase dimerisation domain 193 284 9.3E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 SUPERFAMILY SSF55031 190 303 1.05E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEJY3_02845 e1f65c83720ec3a4962af16f5a7da369 398 Gene3D G3DSA:3.40.630.10 22 378 4.4E-128 T 14-10-2018 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 997 5.1E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Gene3D G3DSA:3.20.20.140 1 247 2.2E-37 T 14-10-2018 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.7E-150 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Pfam PF02811 PHP domain 8 99 9.5E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.24 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 SMART SM00481 4 73 1.4E-7 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEJY3_10590 02da0bc4a77f64bac140fefda1b8d48e 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 1.6E-14 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 SUPERFAMILY SSF81345 10 323 2.75E-55 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 Gene3D G3DSA:1.10.3470.10 3 328 6.9E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 SUPERFAMILY SSF81345 355 651 7.59E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 Pfam PF01032 FecCD transport family 13 323 1.6E-61 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 Pfam PF01032 FecCD transport family 374 651 2.5E-66 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEJY3_23251 58cde1ddbcc91f62a3eed1de10dd8749 655 Gene3D G3DSA:1.10.3470.10 333 653 4.3E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VEJY3_04420 1994fabe9c537cecdd07936a4f39a7f9 246 Pfam PF00117 Glutamine amidotransferase class-I 17 188 2.1E-12 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_04420 1994fabe9c537cecdd07936a4f39a7f9 246 SUPERFAMILY SSF52317 46 194 2.29E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_04420 1994fabe9c537cecdd07936a4f39a7f9 246 Gene3D G3DSA:3.40.50.880 15 244 8.4E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 Pfam PF06725 3D domain 272 348 1.1E-19 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 Gene3D G3DSA:2.40.240.50 119 257 3.7E-133 T 14-10-2018 VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 Pfam PF03562 MltA specific insert domain 96 251 2.8E-38 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 SMART SM00925 119 252 1.7E-68 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 SUPERFAMILY SSF50685 24 350 1.53E-101 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_12320 1030497163acff9b51ec9c09b61ce6a8 367 Gene3D G3DSA:2.40.40.10 51 348 3.7E-133 T 14-10-2018 IPR036908 RlpA-like domain superfamily VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 SUPERFAMILY SSF51412 6 336 2.88E-99 T 14-10-2018 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.8E-185 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 Gene3D G3DSA:3.20.20.70 1 345 1.5E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 4.1E-80 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 SMART SM01240 7 344 2.6E-138 T 14-10-2018 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.11 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEJY3_17801 0aae19b687fa19b766ce903ffff0e539 347 PIRSF PIRSF000235 1 347 7.8E-196 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEJY3_05905 f73ebf97d749f085d9aba7652b0d4b4a 189 Gene3D G3DSA:1.10.3820.10 5 177 1.1E-31 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEJY3_05905 f73ebf97d749f085d9aba7652b0d4b4a 189 PIRSF PIRSF000013 1 184 1.1E-68 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VEJY3_05905 f73ebf97d749f085d9aba7652b0d4b4a 189 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 9 171 1.6E-54 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEJY3_05905 f73ebf97d749f085d9aba7652b0d4b4a 189 SUPERFAMILY SSF48695 8 171 1.23E-30 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VEJY3_04955 4fa82973b64c0ea3746492e7f221d9d0 347 Pfam PF07885 Ion channel 26 100 2.5E-14 T 14-10-2018 IPR013099 Potassium channel domain VEJY3_04955 4fa82973b64c0ea3746492e7f221d9d0 347 Gene3D G3DSA:3.40.50.720 112 233 6.2E-12 T 14-10-2018 VEJY3_04955 4fa82973b64c0ea3746492e7f221d9d0 347 SUPERFAMILY SSF51735 121 240 3.25E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_04955 4fa82973b64c0ea3746492e7f221d9d0 347 SUPERFAMILY SSF81324 14 132 1.7E-17 T 14-10-2018 VEJY3_04955 4fa82973b64c0ea3746492e7f221d9d0 347 Gene3D G3DSA:1.10.287.70 2 105 4.1E-13 T 14-10-2018 VEJY3_15390 ffd47db85fb4f63b1ebf3984bbe751e0 318 PIRSF PIRSF028696 1 318 4.5E-124 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VEJY3_15390 ffd47db85fb4f63b1ebf3984bbe751e0 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 4.8E-110 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VEJY3_15390 ffd47db85fb4f63b1ebf3984bbe751e0 318 SUPERFAMILY SSF56935 36 318 2.32E-5 T 14-10-2018 VEJY3_02015 c51c92488d70d47127686f20895a5b69 196 SUPERFAMILY SSF53697 1 191 3.24E-56 T 14-10-2018 VEJY3_02015 c51c92488d70d47127686f20895a5b69 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.357 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VEJY3_02015 c51c92488d70d47127686f20895a5b69 196 Pfam PF13580 SIS domain 9 144 1.2E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_02015 c51c92488d70d47127686f20895a5b69 196 Gene3D G3DSA:3.40.50.10490 1 195 3.8E-72 T 14-10-2018 VEJY3_12280 1a1131517f76d98ec06eaee05ced0bc3 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 110 4.9E-16 T 14-10-2018 IPR003111 Lon, substrate-binding domain VEJY3_12280 1a1131517f76d98ec06eaee05ced0bc3 198 Gene3D G3DSA:2.30.130.40 1 111 9.0E-30 T 14-10-2018 VEJY3_12280 1a1131517f76d98ec06eaee05ced0bc3 198 SUPERFAMILY SSF88697 3 189 2.98E-45 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_12280 1a1131517f76d98ec06eaee05ced0bc3 198 SMART SM00464 3 186 0.0057 T 14-10-2018 IPR003111 Lon, substrate-binding domain VEJY3_12205 a75ff1fc3ab928e9f148d4de1f87b9a9 334 Pfam PF02424 ApbE family 31 310 7.2E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEJY3_12205 a75ff1fc3ab928e9f148d4de1f87b9a9 334 Gene3D G3DSA:3.10.520.20 15 334 6.2E-112 T 14-10-2018 VEJY3_12205 a75ff1fc3ab928e9f148d4de1f87b9a9 334 SUPERFAMILY SSF143631 23 332 7.32E-100 T 14-10-2018 IPR003374 ApbE-like superfamily VEJY3_12205 a75ff1fc3ab928e9f148d4de1f87b9a9 334 PIRSF PIRSF006268 1 333 2.2E-94 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEJY3_15000 3fd00a5a7017978733a58221429df943 407 Gene3D G3DSA:3.20.20.450 2 196 2.4E-17 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_15000 3fd00a5a7017978733a58221429df943 407 Gene3D G3DSA:1.10.3210.10 197 407 6.9E-22 T 14-10-2018 VEJY3_15000 3fd00a5a7017978733a58221429df943 407 SUPERFAMILY SSF109604 185 404 8.16E-39 T 14-10-2018 VEJY3_15000 3fd00a5a7017978733a58221429df943 407 SMART SM00052 2 199 3.2E-4 T 14-10-2018 IPR001633 EAL domain VEJY3_15000 3fd00a5a7017978733a58221429df943 407 Pfam PF08668 HDOD domain 208 324 2.5E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEJY3_15000 3fd00a5a7017978733a58221429df943 407 Pfam PF00563 EAL domain 72 194 2.9E-14 T 14-10-2018 IPR001633 EAL domain VEJY3_15000 3fd00a5a7017978733a58221429df943 407 SUPERFAMILY SSF141868 4 198 2.62E-28 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_15000 3fd00a5a7017978733a58221429df943 407 PIRSF PIRSF003180 1 407 2.5E-168 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 PIRSF PIRSF001413 1 403 4.6E-172 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 SUPERFAMILY SSF53686 10 395 4.71E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.315 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 Gene3D G3DSA:3.40.50.1100 17 212 4.3E-167 T 14-10-2018 VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 5.2E-42 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_21771 92edfab7d6b3e155a3591f15288838e0 407 Gene3D G3DSA:3.40.50.1100 61 390 4.3E-167 T 14-10-2018 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 Gene3D G3DSA:3.30.870.10 53 250 3.7E-36 T 14-10-2018 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 Gene3D G3DSA:3.30.870.10 286 462 1.6E-40 T 14-10-2018 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 Pfam PF13091 PLD-like domain 307 444 2.7E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 Pfam PF13091 PLD-like domain 74 221 2.4E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 SMART SM00155 396 423 1.2E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 SMART SM00155 162 189 0.076 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 SUPERFAMILY SSF56024 303 458 1.5E-33 T 14-10-2018 VEJY3_16831 d6a09bd22b3fea91a15f4e0e08c1f60c 502 SUPERFAMILY SSF56024 55 234 1.75E-39 T 14-10-2018 VEJY3_13415 6c40869d298dbeffe2857ce8042e4b20 165 Pfam PF17283 SprT-like zinc ribbon domain 120 159 2.4E-8 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain VEJY3_13415 6c40869d298dbeffe2857ce8042e4b20 165 SMART SM00731 11 160 2.2E-54 T 14-10-2018 IPR006640 SprT-like VEJY3_13415 6c40869d298dbeffe2857ce8042e4b20 165 Pfam PF10263 SprT-like family 20 114 8.6E-19 T 14-10-2018 IPR006640 SprT-like VEJY3_13415 6c40869d298dbeffe2857ce8042e4b20 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 41.543 T 14-10-2018 IPR023483 Uncharacterised protein family SprT VEJY3_17061 c9f018ed07b55e305f0ef0df72a0be53 409 Pfam PF06181 Urate oxidase N-terminal 5 298 4.5E-128 T 14-10-2018 IPR010389 Urate oxidase N-terminal VEJY3_00515 ff95cbfbc6fb8f1764388de57736b802 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 144 5.4E-44 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 VEJY3_14430 28745890cb898866158ba847fe220df8 273 PIRSF PIRSF000441 76 266 4.1E-55 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEJY3_14430 28745890cb898866158ba847fe220df8 273 PIRSF PIRSF000441 7 69 420.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEJY3_14430 28745890cb898866158ba847fe220df8 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.7E-37 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEJY3_14430 28745890cb898866158ba847fe220df8 273 SUPERFAMILY SSF51161 8 258 1.66E-62 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_14430 28745890cb898866158ba847fe220df8 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEJY3_14430 28745890cb898866158ba847fe220df8 273 Gene3D G3DSA:1.10.3130.10 1 142 1.4E-51 T 14-10-2018 VEJY3_14430 28745890cb898866158ba847fe220df8 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_14430 28745890cb898866158ba847fe220df8 273 SMART SM00971 9 113 2.5E-60 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEJY3_14430 28745890cb898866158ba847fe220df8 273 Gene3D G3DSA:2.160.10.10 143 273 4.0E-37 T 14-10-2018 VEJY3_11010 9ded5722e1803e8bfeba28156f95d6c4 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.7E-64 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEJY3_00310 ad742ff544b56f289fd2a62da4904de7 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.6E-51 T 14-10-2018 IPR019598 Universal stress protein B VEJY3_00310 ad742ff544b56f289fd2a62da4904de7 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 38.611 T 14-10-2018 IPR019598 Universal stress protein B VEJY3_23316 2f8a4e785f55794f996ee7a90540d139 547 Pfam PF13584 Oxygen tolerance 16 460 1.1E-71 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VEJY3_22146 809c2285f1ce4f3051f936213e733be6 188 SUPERFAMILY SSF49503 77 187 3.19E-22 T 14-10-2018 IPR008972 Cupredoxin VEJY3_22146 809c2285f1ce4f3051f936213e733be6 188 Gene3D G3DSA:2.60.40.420 63 188 8.8E-20 T 14-10-2018 IPR008972 Cupredoxin VEJY3_03645 6b003164c47e33a907c91c35b90a91d3 120 Pfam PF10973 Protein of unknown function (DUF2799) 28 109 2.3E-12 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VEJY3_00300 285aa5065e6e8eb5d80821ee1917b1d1 141 PIRSF PIRSF006276 1 141 1.9E-52 T 14-10-2018 IPR006015 Universal stress protein A VEJY3_00300 285aa5065e6e8eb5d80821ee1917b1d1 141 SUPERFAMILY SSF52402 3 139 1.0E-33 T 14-10-2018 VEJY3_00300 285aa5065e6e8eb5d80821ee1917b1d1 141 Gene3D G3DSA:3.40.50.620 2 141 2.9E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_00300 285aa5065e6e8eb5d80821ee1917b1d1 141 Pfam PF00582 Universal stress protein family 3 138 2.7E-22 T 14-10-2018 IPR006016 UspA VEJY3_15380 03c0f82096f781d883e4dbc0fc894c7f 200 Pfam PF01323 DSBA-like thioredoxin domain 40 189 8.4E-28 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEJY3_15380 03c0f82096f781d883e4dbc0fc894c7f 200 Gene3D G3DSA:3.40.30.10 17 200 4.7E-56 T 14-10-2018 VEJY3_15380 03c0f82096f781d883e4dbc0fc894c7f 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEJY3_15380 03c0f82096f781d883e4dbc0fc894c7f 200 SUPERFAMILY SSF52833 21 197 2.05E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_15380 03c0f82096f781d883e4dbc0fc894c7f 200 PIRSF PIRSF001488 1 200 1.4E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VEJY3_12485 a823cd5822ab4a194256aec1f7b840d2 415 Gene3D G3DSA:3.40.50.300 163 399 1.2E-40 T 14-10-2018 VEJY3_12485 a823cd5822ab4a194256aec1f7b840d2 415 SUPERFAMILY SSF52540 164 400 1.59E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12485 a823cd5822ab4a194256aec1f7b840d2 415 Pfam PF13614 AAA domain 165 321 2.4E-9 T 14-10-2018 IPR025669 AAA domain VEJY3_20706 0f499013700535f37a9bcd94ca29c1b1 236 SUPERFAMILY SSF52317 1 194 4.3E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_20706 0f499013700535f37a9bcd94ca29c1b1 236 Pfam PF00117 Glutamine amidotransferase class-I 42 185 8.8E-15 T 14-10-2018 IPR017926 Glutamine amidotransferase VEJY3_20706 0f499013700535f37a9bcd94ca29c1b1 236 Gene3D G3DSA:3.40.50.880 1 234 1.0E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_11425 7af560e6046d82da07072924cc69b907 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 3.5E-256 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 8.2E-126 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VEJY3_11425 7af560e6046d82da07072924cc69b907 661 Pfam PF01578 Cytochrome C assembly protein 89 297 3.3E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 9.3E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11425 7af560e6046d82da07072924cc69b907 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 6.9E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_18731 d4b7755e6024c80c761a4070749d2a56 159 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 30 121 9.0E-14 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VEJY3_18731 d4b7755e6024c80c761a4070749d2a56 159 SUPERFAMILY SSF53146 20 134 1.44E-24 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_18731 d4b7755e6024c80c761a4070749d2a56 159 Gene3D G3DSA:3.30.420.130 16 136 5.2E-28 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 Gene3D G3DSA:3.40.190.10 80 169 1.3E-13 T 14-10-2018 VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 SUPERFAMILY SSF53850 89 284 2.53E-28 T 14-10-2018 VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 Pfam PF03466 LysR substrate binding domain 88 283 4.0E-29 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 SUPERFAMILY SSF46785 1 107 2.67E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 Gene3D G3DSA:1.10.10.10 1 79 3.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16956 8fb45bf7591d0d076773a22016776e05 288 Gene3D G3DSA:3.40.190.10 174 252 8.8E-8 T 14-10-2018 VEJY3_20681 f40a068472a2effb682ee32dfee5696a 121 SUPERFAMILY SSF46785 17 116 4.57E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_20681 f40a068472a2effb682ee32dfee5696a 121 Pfam PF01638 HxlR-like helix-turn-helix 31 116 1.6E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type VEJY3_20681 f40a068472a2effb682ee32dfee5696a 121 Gene3D G3DSA:1.10.10.10 4 121 3.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05275 f87a4f9b50c1166c954ffcfe466895d2 140 Gene3D G3DSA:1.10.10.2830 1 84 2.3E-17 T 14-10-2018 VEJY3_05275 f87a4f9b50c1166c954ffcfe466895d2 140 Pfam PF08775 ParB family 14 136 1.3E-36 T 14-10-2018 IPR014884 ParB protein family, C-terminal VEJY3_00575 374c01e77d51925ee7b2231bdc8b1b01 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.506 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEJY3_00575 374c01e77d51925ee7b2231bdc8b1b01 144 SUPERFAMILY SSF69500 2 143 4.84E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VEJY3_00575 374c01e77d51925ee7b2231bdc8b1b01 144 Gene3D G3DSA:3.50.80.10 1 144 3.7E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VEJY3_00575 374c01e77d51925ee7b2231bdc8b1b01 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.1E-62 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEJY3_00575 374c01e77d51925ee7b2231bdc8b1b01 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.6E-50 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 SMART SM00357 6 70 1.1E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 Gene3D G3DSA:2.40.50.140 2 69 2.9E-28 T 14-10-2018 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.2E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 SUPERFAMILY SSF50249 4 68 5.39E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEJY3_18846 80ad8230667ea5d9b137b0ba2b5e61fc 70 PIRSF PIRSF002599 1 70 1.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEJY3_06925 e4afc2e3821e3fa5e56c1a31004f0f3f 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 1.2E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VEJY3_06925 e4afc2e3821e3fa5e56c1a31004f0f3f 200 SMART SM00702 11 187 1.5E-37 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VEJY3_06925 e4afc2e3821e3fa5e56c1a31004f0f3f 200 Gene3D G3DSA:2.60.120.620 1 189 8.7E-53 T 14-10-2018 VEJY3_02335 38e4348db371f41bf7f6ea3c409dc714 344 Gene3D G3DSA:3.20.20.100 1 344 2.5E-134 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_02335 38e4348db371f41bf7f6ea3c409dc714 344 Pfam PF00248 Aldo/keto reductase family 15 335 5.1E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEJY3_02335 38e4348db371f41bf7f6ea3c409dc714 344 SUPERFAMILY SSF51430 1 343 6.81E-109 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEJY3_05450 52dd509ff24f4097d50d98109ee1803d 268 SUPERFAMILY SSF53335 20 203 1.44E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_05450 52dd509ff24f4097d50d98109ee1803d 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.552 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VEJY3_05450 52dd509ff24f4097d50d98109ee1803d 268 Pfam PF08241 Methyltransferase domain 58 149 4.3E-27 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEJY3_05450 52dd509ff24f4097d50d98109ee1803d 268 Gene3D G3DSA:3.40.50.150 12 265 7.7E-44 T 14-10-2018 VEJY3_05450 52dd509ff24f4097d50d98109ee1803d 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 7.6E-70 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 1.1E-28 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.1E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.1E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.1E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 102 1.9E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_11585 fb90c31bc405bc85348296d0838c7c11 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.657 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-36 T 14-10-2018 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 SUPERFAMILY SSF52172 1 118 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 SMART SM00448 1 112 9.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 Pfam PF00072 Response regulator receiver domain 3 113 6.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 Gene3D G3DSA:1.10.10.10 123 219 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 SMART SM00862 145 216 1.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_05850 bca538f7203fa22e36ce8f7c5069444e 219 SUPERFAMILY SSF46894 119 217 5.1E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_21846 89716fd0e4d5076af184d78ca6c35832 207 SUPERFAMILY SSF56784 10 194 1.42E-31 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_21846 89716fd0e4d5076af184d78ca6c35832 207 Gene3D G3DSA:3.40.50.1000 12 184 5.4E-53 T 14-10-2018 IPR023214 HAD superfamily VEJY3_21846 89716fd0e4d5076af184d78ca6c35832 207 Gene3D G3DSA:1.10.260.80 24 75 5.4E-53 T 14-10-2018 VEJY3_21846 89716fd0e4d5076af184d78ca6c35832 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 5.1E-17 T 14-10-2018 VEJY3_22411 853a11805cf57b03f44e052b4d9323dc 173 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 104 7.8E-17 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_22411 853a11805cf57b03f44e052b4d9323dc 173 Gene3D G3DSA:2.30.110.10 12 173 1.7E-53 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_22411 853a11805cf57b03f44e052b4d9323dc 173 SUPERFAMILY SSF50475 12 162 1.05E-34 T 14-10-2018 VEJY3_22411 853a11805cf57b03f44e052b4d9323dc 173 PIRSF PIRSF004633 1 173 3.3E-75 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VEJY3_18521 3cab5547b6afad7eeb3ee792947a6e67 300 Gene3D G3DSA:3.20.20.70 1 296 3.2E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_18521 3cab5547b6afad7eeb3ee792947a6e67 300 Pfam PF00682 HMGL-like 5 274 3.8E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEJY3_18521 3cab5547b6afad7eeb3ee792947a6e67 300 SUPERFAMILY SSF51569 3 291 1.83E-70 T 14-10-2018 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 Gene3D G3DSA:1.10.10.10 146 214 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_23276 995793618dba74cccf4b71657a91c521 214 SMART SM00421 153 210 9.6E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 SUPERFAMILY SSF46894 143 212 2.69E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_23276 995793618dba74cccf4b71657a91c521 214 Gene3D G3DSA:3.40.50.2300 7 143 7.5E-27 T 14-10-2018 VEJY3_06580 ae9c636f6515283babb71cbcbc718fca 533 SUPERFAMILY SSF51905 18 343 2.59E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_06580 ae9c636f6515283babb71cbcbc718fca 533 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 17 507 50.615 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 VEJY3_06580 ae9c636f6515283babb71cbcbc718fca 533 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 20 507 3.6E-227 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Gene3D G3DSA:2.170.280.10 190 284 7.1E-43 T 14-10-2018 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Gene3D G3DSA:1.20.1330.10 45 172 8.8E-75 T 14-10-2018 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Gene3D G3DSA:1.20.1330.10 285 336 7.1E-43 T 14-10-2018 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Gene3D G3DSA:1.20.58.1830 5 33 8.8E-75 T 14-10-2018 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Gene3D G3DSA:1.20.58.1830 342 376 7.1E-43 T 14-10-2018 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Pfam PF07196 Flagellin hook IN motif 204 246 1.1E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 4.2E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11640 cbf19fb89eb1e7de4cdc9d57b8689adf 377 SUPERFAMILY SSF64518 5 376 2.22E-97 T 14-10-2018 VEJY3_23696 d4a164fc8609e964251139779a5d1afb 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 223 37.543 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_23696 d4a164fc8609e964251139779a5d1afb 225 SUPERFAMILY SSF53955 50 222 3.94E-57 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_23696 d4a164fc8609e964251139779a5d1afb 225 Pfam PF00912 Transglycosylase 51 217 2.0E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_23696 d4a164fc8609e964251139779a5d1afb 225 Gene3D G3DSA:1.10.3810.10 47 224 1.5E-53 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEJY3_01495 e1c5d7a3133aa6da1f5319f12e44739b 224 Pfam PF10986 Protein of unknown function (DUF2796) 132 219 3.6E-18 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VEJY3_01495 e1c5d7a3133aa6da1f5319f12e44739b 224 Pfam PF10986 Protein of unknown function (DUF2796) 28 144 3.4E-30 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VEJY3_19251 2414eb8ace05922344167f1bee000c42 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 2.6E-43 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 VEJY3_03975 00404fe835c5bd017d893300bfe4d67a 87 SUPERFAMILY SSF55229 34 85 1.44E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VEJY3_03975 00404fe835c5bd017d893300bfe4d67a 87 Gene3D G3DSA:3.30.1070.10 1 84 9.3E-26 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VEJY3_03975 00404fe835c5bd017d893300bfe4d67a 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 1.1E-22 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VEJY3_03975 00404fe835c5bd017d893300bfe4d67a 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.795 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VEJY3_19256 4cb74b331d60690c03e880761a09605f 461 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 450 2.7E-80 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_19256 4cb74b331d60690c03e880761a09605f 461 PIRSF PIRSF006066 6 461 3.7E-68 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_16231 16f89a72c3fb714672e8f4b3a9576e0b 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 5.2E-65 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 VEJY3_12220 f257bff6609a90cf459f308dc3e6cfea 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.4E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_12220 f257bff6609a90cf459f308dc3e6cfea 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 2.8E-109 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VEJY3_12220 f257bff6609a90cf459f308dc3e6cfea 210 PIRSF PIRSF006102 3 210 1.2E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_12220 f257bff6609a90cf459f308dc3e6cfea 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.742 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VEJY3_20661 29edd96f4f5c3d83c2de26b7cd150f5c 194 Pfam PF02525 Flavodoxin-like fold 3 189 1.4E-36 T 14-10-2018 IPR003680 Flavodoxin-like fold VEJY3_20661 29edd96f4f5c3d83c2de26b7cd150f5c 194 Gene3D G3DSA:3.40.50.360 1 193 5.4E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_20661 29edd96f4f5c3d83c2de26b7cd150f5c 194 SUPERFAMILY SSF52218 1 192 2.67E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_22861 173f9fab08651a7fe089362d68fbd4c3 294 SUPERFAMILY SSF53822 28 293 7.61E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_22861 173f9fab08651a7fe089362d68fbd4c3 294 Pfam PF13377 Periplasmic binding protein-like domain 132 292 2.9E-31 T 14-10-2018 VEJY3_22861 173f9fab08651a7fe089362d68fbd4c3 294 Gene3D G3DSA:3.40.50.2300 17 268 1.6E-55 T 14-10-2018 VEJY3_22861 173f9fab08651a7fe089362d68fbd4c3 294 Gene3D G3DSA:3.40.50.2300 124 251 1.6E-55 T 14-10-2018 VEJY3_10375 7ea3c7928529dece865529bd0be34a8d 298 SUPERFAMILY SSF53686 9 295 1.76E-53 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_10375 7ea3c7928529dece865529bd0be34a8d 298 Gene3D G3DSA:3.40.50.1100 15 285 1.5E-22 T 14-10-2018 VEJY3_10375 7ea3c7928529dece865529bd0be34a8d 298 PIRSF PIRSF006278 2 181 8.4E-19 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VEJY3_10375 7ea3c7928529dece865529bd0be34a8d 298 PIRSF PIRSF006278 205 296 0.52 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VEJY3_10375 7ea3c7928529dece865529bd0be34a8d 298 Gene3D G3DSA:3.40.50.1100 33 137 1.5E-22 T 14-10-2018 VEJY3_23186 1bff530239026353c45094b67a351324 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_23186 1bff530239026353c45094b67a351324 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_23186 1bff530239026353c45094b67a351324 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_23186 1bff530239026353c45094b67a351324 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEJY3_23186 1bff530239026353c45094b67a351324 216 Gene3D G3DSA:1.10.150.240 17 80 1.8E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEJY3_23186 1bff530239026353c45094b67a351324 216 SUPERFAMILY SSF56784 1 213 1.68E-50 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_23186 1bff530239026353c45094b67a351324 216 Gene3D G3DSA:3.40.50.1000 5 185 1.8E-50 T 14-10-2018 IPR023214 HAD superfamily VEJY3_23186 1bff530239026353c45094b67a351324 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 6.0E-33 T 14-10-2018 VEJY3_22906 3068ad948c1005e7b4982959dd448fdf 446 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 26 443 21.178 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEJY3_22906 3068ad948c1005e7b4982959dd448fdf 446 Pfam PF06965 Na+/H+ antiporter 1 28 434 6.8E-128 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEJY3_22906 3068ad948c1005e7b4982959dd448fdf 446 Gene3D G3DSA:1.20.1530.10 23 283 7.9E-77 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VEJY3_22906 3068ad948c1005e7b4982959dd448fdf 446 Gene3D G3DSA:1.20.1530.10 287 442 1.0E-46 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VEJY3_21986 3a29f1f839b672c6b41b41fe62d0f39a 237 Pfam PF03591 AzlC protein 25 163 1.4E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease VEJY3_21711 ef771e35424420fac73b55e7542aa605 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 372 2.1E-110 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_21711 ef771e35424420fac73b55e7542aa605 380 SUPERFAMILY SSF56796 3 379 1.83E-113 T 14-10-2018 VEJY3_21711 ef771e35424420fac73b55e7542aa605 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_21711 ef771e35424420fac73b55e7542aa605 380 Gene3D G3DSA:1.20.1090.10 183 380 7.7E-70 T 14-10-2018 VEJY3_21711 ef771e35424420fac73b55e7542aa605 380 Gene3D G3DSA:3.40.50.1970 1 181 2.8E-45 T 14-10-2018 VEJY3_08770 ba307f8e1815e062f8e6e79dd631ef19 363 Gene3D G3DSA:3.40.50.2000 172 345 2.2E-57 T 14-10-2018 VEJY3_08770 ba307f8e1815e062f8e6e79dd631ef19 363 Pfam PF00534 Glycosyl transferases group 1 192 335 9.5E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_08770 ba307f8e1815e062f8e6e79dd631ef19 363 SUPERFAMILY SSF53756 8 355 1.57E-62 T 14-10-2018 VEJY3_08770 ba307f8e1815e062f8e6e79dd631ef19 363 Pfam PF13439 Glycosyltransferase Family 4 50 175 1.4E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_08770 ba307f8e1815e062f8e6e79dd631ef19 363 Gene3D G3DSA:3.40.50.2000 68 355 2.2E-57 T 14-10-2018 VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 Gene3D G3DSA:3.90.1150.10 40 387 8.9E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 SUPERFAMILY SSF53383 4 395 3.71E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 Pfam PF00155 Aminotransferase class I and II 43 387 3.1E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.138 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VEJY3_23511 2ad00f79a1b314c432a6abfeed190543 397 Gene3D G3DSA:3.40.640.10 58 296 8.9E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 SUPERFAMILY SSF53254 1 143 5.89E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 6.4E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 Gene3D G3DSA:3.40.50.1240 1 154 2.5E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 SMART SM00855 2 116 7.2E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 PIRSF PIRSF000709 1 87 3.2E-4 T 14-10-2018 VEJY3_11360 8c736252f74f7a83e03577fa9ff66de0 154 PIRSF PIRSF000709 94 145 280.0 T 14-10-2018 VEJY3_17836 20202fd50cb1e9be1199392250ab5b24 377 SUPERFAMILY SSF51395 2 342 5.36E-98 T 14-10-2018 VEJY3_17836 20202fd50cb1e9be1199392250ab5b24 377 Gene3D G3DSA:3.20.20.70 2 371 1.3E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_17836 20202fd50cb1e9be1199392250ab5b24 377 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 3.3E-80 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 Pfam PF03466 LysR substrate binding domain 88 295 9.3E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 Gene3D G3DSA:1.10.10.10 4 91 3.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 Gene3D G3DSA:3.40.190.290 92 296 1.6E-51 T 14-10-2018 VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 SUPERFAMILY SSF53850 89 300 2.31E-36 T 14-10-2018 VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 SUPERFAMILY SSF46785 6 107 5.45E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_22371 f8d327ea300d84eac32561347c24b06f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_07050 281b6f7900052149a1c331ebe8248fb7 159 Gene3D G3DSA:2.40.160.20 18 159 8.8E-25 T 14-10-2018 VEJY3_07050 281b6f7900052149a1c331ebe8248fb7 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 2.5E-18 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VEJY3_07050 281b6f7900052149a1c331ebe8248fb7 159 SUPERFAMILY SSF56925 17 158 3.4E-21 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 PRINTS PR00990 Ribokinase signature 175 190 2.5E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 PRINTS PR00990 Ribokinase signature 214 225 2.5E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 PRINTS PR00990 Ribokinase signature 22 41 2.5E-7 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 SUPERFAMILY SSF53613 1 303 9.67E-81 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 Pfam PF00294 pfkB family carbohydrate kinase 1 297 3.3E-68 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 Gene3D G3DSA:3.40.1190.20 1 305 2.2E-93 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_06220 221f93b5b87c652e31fd2ce440819c09 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_07990 e91a1f88d137c24c3afde79008bfc995 177 SUPERFAMILY SSF55729 23 142 7.48E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_07990 e91a1f88d137c24c3afde79008bfc995 177 Gene3D G3DSA:3.40.630.30 20 177 8.5E-41 T 14-10-2018 VEJY3_07990 e91a1f88d137c24c3afde79008bfc995 177 Pfam PF00583 Acetyltransferase (GNAT) family 57 142 4.9E-13 T 14-10-2018 IPR000182 GNAT domain VEJY3_17511 e2ffbd7b29e65b988e2c69b66f20e7cf 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.725 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VEJY3_17511 e2ffbd7b29e65b988e2c69b66f20e7cf 104 PIRSF PIRSF028773 1 104 2.0E-45 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VEJY3_17511 e2ffbd7b29e65b988e2c69b66f20e7cf 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 5.0E-44 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VEJY3_17511 e2ffbd7b29e65b988e2c69b66f20e7cf 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 6.9E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VEJY3_13500 48daa9e71182a80819405a159c26cfd8 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 1.3E-13 T 14-10-2018 IPR000241 Putative RNA methylase domain VEJY3_13500 48daa9e71182a80819405a159c26cfd8 342 SUPERFAMILY SSF53335 106 318 3.71E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00425 58b8dd252953134df07ae3db894d4fa8 302 SUPERFAMILY SSF103481 189 287 1.05E-9 T 14-10-2018 VEJY3_00425 58b8dd252953134df07ae3db894d4fa8 302 SUPERFAMILY SSF103481 43 144 1.31E-12 T 14-10-2018 VEJY3_00425 58b8dd252953134df07ae3db894d4fa8 302 Pfam PF00892 EamA-like transporter family 9 141 5.1E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_00425 58b8dd252953134df07ae3db894d4fa8 302 Pfam PF00892 EamA-like transporter family 155 286 4.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_21456 c783eadfda7a85776e13ac86a889888a 475 SUPERFAMILY SSF103473 38 452 5.62E-34 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_21456 c783eadfda7a85776e13ac86a889888a 475 Gene3D G3DSA:1.20.1250.20 28 444 7.8E-23 T 14-10-2018 VEJY3_21456 c783eadfda7a85776e13ac86a889888a 475 Pfam PF13347 MFS/sugar transport protein 28 450 5.4E-96 T 14-10-2018 VEJY3_21456 c783eadfda7a85776e13ac86a889888a 475 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 77 102 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 VEJY3_10475 41a7e4d02ff84936a151adf31bfacb6a 376 Pfam PF03916 Polysulphide reductase, NrfD 9 316 3.0E-17 T 14-10-2018 IPR005614 NrfD family VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.5E-52 T 14-10-2018 IPR016040 NAD(P)-binding domain VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 SUPERFAMILY SSF51735 1 333 1.25E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 Gene3D G3DSA:3.40.50.720 1 334 4.4E-95 T 14-10-2018 VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 7.8E-28 T 14-10-2018 VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 7.8E-28 T 14-10-2018 VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 7.8E-28 T 14-10-2018 VEJY3_10525 d1e3dca52a444b9acf5b4c22faa721f1 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 7.8E-28 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 Gene3D G3DSA:2.40.420.20 268 336 7.7E-71 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 SUPERFAMILY SSF111369 47 262 2.35E-38 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 Gene3D G3DSA:2.40.50.100 57 185 7.7E-71 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 Gene3D G3DSA:2.40.30.170 44 267 7.7E-71 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 Gene3D G3DSA:1.10.287.470 92 151 7.7E-71 T 14-10-2018 VEJY3_04315 6225f2394c9c0dc60ba7e512dbea67e6 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 258 1.0E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_00250 39e04533a942c88ea7e068aee68603ed 458 Pfam PF02447 GntP family permease 14 456 4.5E-117 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_00250 39e04533a942c88ea7e068aee68603ed 458 PIRSF PIRSF002746 9 458 3.3E-144 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_19781 edb2d7b968d7f5ba1ed4d0248ec0bad9 458 SUPERFAMILY SSF52467 285 458 2.09E-78 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEJY3_19781 edb2d7b968d7f5ba1ed4d0248ec0bad9 458 Gene3D G3DSA:3.40.50.1220 282 458 1.4E-89 T 14-10-2018 VEJY3_19781 edb2d7b968d7f5ba1ed4d0248ec0bad9 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 9.1E-205 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEJY3_19781 edb2d7b968d7f5ba1ed4d0248ec0bad9 458 PIRSF PIRSF000204 1 458 1.3E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VEJY3_15906 b9f6c1e0b92098f1dab3456c10999850 147 Pfam PF07681 DoxX 18 103 6.5E-23 T 14-10-2018 IPR032808 DoxX family VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 285 21.753 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 Pfam PF07549 SecD/SecF GG Motif 30 55 7.8E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 Gene3D G3DSA:1.20.1640.10 96 288 2.5E-8 T 14-10-2018 VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 SUPERFAMILY SSF82866 94 279 4.97E-34 T 14-10-2018 VEJY3_17591 f04bff360d3fd8994d0879d8df880f8b 300 Pfam PF02355 Protein export membrane protein 101 278 1.4E-53 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEJY3_02755 5034922624648f2ed300e6181ee5a68e 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 4.4E-35 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VEJY3_02755 5034922624648f2ed300e6181ee5a68e 66 PIRSF PIRSF039003 3 66 2.3E-35 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VEJY3_02755 5034922624648f2ed300e6181ee5a68e 66 SUPERFAMILY SSF140319 2 64 1.02E-29 T 14-10-2018 IPR036762 IscX-like superfamily VEJY3_02755 5034922624648f2ed300e6181ee5a68e 66 Gene3D G3DSA:1.10.10.600 1 66 5.9E-31 T 14-10-2018 IPR036762 IscX-like superfamily VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 SUPERFAMILY SSF46785 3 82 1.34E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 Gene3D G3DSA:3.40.190.10 102 285 1.3E-41 T 14-10-2018 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 Pfam PF03466 LysR substrate binding domain 90 288 3.8E-26 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 Gene3D G3DSA:1.10.10.10 6 100 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 Gene3D G3DSA:3.40.190.10 162 260 1.3E-41 T 14-10-2018 VEJY3_16611 c65968c51d731ea933ffe0eb6389296e 289 SUPERFAMILY SSF53850 93 288 5.79E-29 T 14-10-2018 VEJY3_12165 1dca48d5b9cbdbf8c07eb378cd9bd7ab 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 1.8E-20 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 Gene3D G3DSA:2.40.50.100 239 361 3.9E-50 T 14-10-2018 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 SMART SM00382 28 210 8.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 SUPERFAMILY SSF52540 4 244 3.46E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 SUPERFAMILY SSF50331 236 363 4.86E-31 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 Pfam PF08402 TOBE domain 281 353 1.7E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 Pfam PF00005 ABC transporter 20 161 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 Gene3D G3DSA:3.40.50.300 1 238 8.6E-75 T 14-10-2018 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_23101 6be27144931ceafe17e4286e5a068ded 372 Gene3D G3DSA:2.40.50.140 287 344 3.9E-50 T 14-10-2018 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 Gene3D G3DSA:3.10.20.10 36 119 6.9E-10 T 14-10-2018 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 SUPERFAMILY SSF53927 15 266 9.93E-71 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 PIRSF PIRSF015626 2 271 2.5E-97 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 Pfam PF02634 FdhD/NarQ family 35 266 4.1E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 Gene3D G3DSA:3.40.140.10 122 273 2.0E-42 T 14-10-2018 VEJY3_07200 8430738abac1dd1e6be5171dfeb90dae 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.771 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEJY3_21996 6274a053d79bbb11d994385c6a35e918 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 185 2.4E-26 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VEJY3_21996 6274a053d79bbb11d994385c6a35e918 204 Gene3D G3DSA:3.90.850.10 7 202 3.4E-45 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_21996 6274a053d79bbb11d994385c6a35e918 204 SUPERFAMILY SSF56529 11 187 2.49E-45 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEJY3_24231 fce77891eb4ad29e43f022ead849bef5 140 SUPERFAMILY SSF82784 1 135 6.41E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VEJY3_24231 fce77891eb4ad29e43f022ead849bef5 140 Pfam PF02566 OsmC-like protein 38 133 5.0E-18 T 14-10-2018 IPR003718 OsmC/Ohr family VEJY3_24231 fce77891eb4ad29e43f022ead849bef5 140 Gene3D G3DSA:2.20.25.10 1 43 1.2E-20 T 14-10-2018 VEJY3_24231 fce77891eb4ad29e43f022ead849bef5 140 Gene3D G3DSA:3.30.300.20 44 140 2.5E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VEJY3_09215 1b8b9b08f2fad211ca21c78ea2a4efde 205 Pfam PF02371 Transposase IS116/IS110/IS902 family 73 151 1.1E-20 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 Pfam PF12801 4Fe-4S binding domain 82 127 6.6E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 Pfam PF12801 4Fe-4S binding domain 176 211 9.4E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 SUPERFAMILY SSF54862 95 277 4.27E-20 T 14-10-2018 VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 Gene3D G3DSA:3.30.70.20 213 282 1.4E-8 T 14-10-2018 VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_23416 e4754a9cd1148bb102217745fc9bebe3 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 2.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_13290 50883ec70166415bdb844859d1cbd0db 208 SUPERFAMILY SSF89069 4 67 7.32E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VEJY3_13290 50883ec70166415bdb844859d1cbd0db 208 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 191 6.6E-20 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VEJY3_13290 50883ec70166415bdb844859d1cbd0db 208 PIRSF PIRSF016938 1 201 5.1E-35 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VEJY3_13290 50883ec70166415bdb844859d1cbd0db 208 Gene3D G3DSA:1.10.10.880 2 67 1.4E-24 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VEJY3_13290 50883ec70166415bdb844859d1cbd0db 208 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 99 1.3E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 PIRSF PIRSF001399 1 147 7.0E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 67.469 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 Gene3D G3DSA:3.40.50.9100 1 147 1.1E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 Pfam PF01220 Dehydroquinase class II 3 144 2.0E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 144 3.0E-39 T 14-10-2018 VEJY3_18081 b32487274f8c2692059b4a4346b2a881 147 SUPERFAMILY SSF52304 3 146 6.8E-59 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Gene3D G3DSA:3.40.50.300 221 453 2.0E-75 T 14-10-2018 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 SUPERFAMILY SSF52540 21 458 3.09E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 715 50.328 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Pfam PF13538 UvrD-like helicase C-terminal domain 646 692 1.2E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Gene3D G3DSA:3.40.50.300 463 583 1.1E-26 T 14-10-2018 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Gene3D G3DSA:3.40.50.300 584 706 3.7E-26 T 14-10-2018 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 SUPERFAMILY SSF52540 378 717 1.06E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Pfam PF13604 AAA domain 252 413 2.1E-30 T 14-10-2018 VEJY3_12335 67932e465cf9e4762711b8081d24eb2d 719 Gene3D G3DSA:1.10.10.1020 13 138 1.8E-21 T 14-10-2018 VEJY3_12140 f7c95d07fb59eb6d3bfea361927bacf6 41 SUPERFAMILY SSF57840 5 40 1.44E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_12140 f7c95d07fb59eb6d3bfea361927bacf6 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_12140 f7c95d07fb59eb6d3bfea361927bacf6 41 Pfam PF00444 Ribosomal protein L36 1 40 4.6E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_12140 f7c95d07fb59eb6d3bfea361927bacf6 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.88 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 Gene3D G3DSA:1.20.81.30 256 369 3.7E-25 T 14-10-2018 VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.6E-34 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 7.6E-25 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 Gene3D G3DSA:1.20.81.30 55 172 4.9E-37 T 14-10-2018 VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.1E-37 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.1E-37 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.1E-37 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_00620 6a10b34eb093fa086bf21325234f3a28 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.1E-37 T 14-10-2018 IPR003004 GspF/PilC family VEJY3_06525 bcf86c3474c66f3e8d168ee93a5f4c02 93 Pfam PF06196 Protein of unknown function (DUF997) 10 86 2.0E-28 T 14-10-2018 IPR010398 Protein of unknown function DUF997 VEJY3_06525 bcf86c3474c66f3e8d168ee93a5f4c02 93 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 9 85 3.0E-23 T 14-10-2018 IPR010398 Protein of unknown function DUF997 VEJY3_17821 324ec246a1cd3104260de5f4e993b504 95 SUPERFAMILY SSF54909 1 93 3.67E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_17821 324ec246a1cd3104260de5f4e993b504 95 Pfam PF07045 Domain of unknown function (DUF1330) 3 93 9.1E-21 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 VEJY3_17821 324ec246a1cd3104260de5f4e993b504 95 Gene3D G3DSA:3.30.70.100 1 93 1.0E-21 T 14-10-2018 VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 Gene3D G3DSA:3.30.230.10 1 118 4.4E-41 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.574 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 Pfam PF00825 Ribonuclease P 6 112 1.5E-32 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 SUPERFAMILY SSF54211 4 114 1.54E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VEJY3_00030 ce9840eb2f552b00e3a2227fdf234d6b 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 4.0E-45 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEJY3_10410 6acf76e508d0d4feb689515b4f01d754 702 SUPERFAMILY SSF52833 580 675 3.01E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_10410 6acf76e508d0d4feb689515b4f01d754 702 Pfam PF11412 Disulphide bond corrector protein DsbC 58 162 3.0E-15 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VEJY3_10410 6acf76e508d0d4feb689515b4f01d754 702 Gene3D G3DSA:3.40.30.10 584 698 6.5E-8 T 14-10-2018 VEJY3_10410 6acf76e508d0d4feb689515b4f01d754 702 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 516 1.5E-13 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VEJY3_10410 6acf76e508d0d4feb689515b4f01d754 702 Pfam PF13899 Thioredoxin-like 587 673 3.3E-9 T 14-10-2018 VEJY3_03460 5f7dc8287e192c1a6938bdc299811b4e 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 4.0E-16 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 VEJY3_02590 8ba47ba37d79c12f81face54b3d10da3 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.104 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VEJY3_02590 8ba47ba37d79c12f81face54b3d10da3 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.9E-125 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 SMART SM00421 135 192 7.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 SMART SM00448 2 115 2.2E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 Pfam PF00072 Response regulator receiver domain 4 115 7.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 SUPERFAMILY SSF52172 3 125 3.42E-19 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 Gene3D G3DSA:3.40.50.12740 3 195 8.1E-36 T 14-10-2018 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 8.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEJY3_19156 0ec3752ee532da5490cf5bec41eb174c 202 SUPERFAMILY SSF46894 132 191 2.75E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEJY3_22841 1487f3c872d15b36647f25d8b636d236 331 SUPERFAMILY SSF51182 34 322 1.95E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_22841 1487f3c872d15b36647f25d8b636d236 331 Gene3D G3DSA:2.60.120.10 195 328 6.8E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_22841 1487f3c872d15b36647f25d8b636d236 331 Gene3D G3DSA:2.60.120.10 47 144 9.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_06475 dd54fe8769032654f5d9ef324ef2a589 360 Gene3D G3DSA:3.40.50.1980 22 360 3.6E-95 T 14-10-2018 VEJY3_06475 dd54fe8769032654f5d9ef324ef2a589 360 Pfam PF01497 Periplasmic binding protein 75 306 1.7E-32 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_06475 dd54fe8769032654f5d9ef324ef2a589 360 SUPERFAMILY SSF53807 25 351 1.41E-52 T 14-10-2018 VEJY3_19261 0890934a0a6e9a950eac97812ec88a43 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 168 3.3E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_07670 f9b25a30a71de9a9336abe7e81cb8931 350 PIRSF PIRSF001361 1 350 2.8E-153 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEJY3_07670 f9b25a30a71de9a9336abe7e81cb8931 350 Gene3D G3DSA:3.20.20.70 1 350 4.6E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_07670 f9b25a30a71de9a9336abe7e81cb8931 350 SUPERFAMILY SSF51569 8 347 2.34E-129 T 14-10-2018 VEJY3_07670 f9b25a30a71de9a9336abe7e81cb8931 350 Pfam PF00793 DAHP synthetase I family 42 338 1.8E-98 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 Gene3D G3DSA:2.40.70.10 488 610 1.0E-31 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 Gene3D G3DSA:2.40.70.10 115 203 7.9E-9 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 Gene3D G3DSA:2.40.70.10 38 88 4.0E-5 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 SUPERFAMILY SSF50630 218 339 2.36E-16 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 SUPERFAMILY SSF50630 357 481 3.77E-9 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 SUPERFAMILY SSF50630 41 210 1.52E-21 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 SUPERFAMILY SSF50630 490 616 6.4E-32 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_00700 c47ce9a809dfabc3990241b853a47df2 625 Pfam PF05618 Putative ATP-dependant zinc protease 500 619 8.1E-25 T 14-10-2018 VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 Gene3D G3DSA:3.40.50.720 5 175 2.2E-28 T 14-10-2018 VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 SUPERFAMILY SSF51735 5 167 2.16E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 Gene3D G3DSA:1.10.1040.10 177 293 2.9E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 SUPERFAMILY SSF48179 169 273 1.36E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 145 3.2E-5 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEJY3_18046 0a2edbf3d532c5c70f29bed429fde8b5 305 Pfam PF09130 Domain of unknown function (DUF1932) 196 266 1.0E-11 T 14-10-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal VEJY3_12545 f8a5958b8ec599017e8fcce5ef96ebe4 564 Pfam PF00501 AMP-binding enzyme 25 441 3.2E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_12545 f8a5958b8ec599017e8fcce5ef96ebe4 564 SUPERFAMILY SSF56801 18 548 9.81E-110 T 14-10-2018 VEJY3_12545 f8a5958b8ec599017e8fcce5ef96ebe4 564 Gene3D G3DSA:3.40.50.12780 17 437 1.4E-84 T 14-10-2018 VEJY3_12545 f8a5958b8ec599017e8fcce5ef96ebe4 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_13670 a2e1cb74e9fa73401b749753ec318808 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 7.3E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEJY3_13670 a2e1cb74e9fa73401b749753ec318808 321 Pfam PF01699 Sodium/calcium exchanger protein 5 144 1.9E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEJY3_13670 a2e1cb74e9fa73401b749753ec318808 321 Gene3D G3DSA:1.20.58.1130 8 206 1.7E-86 T 14-10-2018 VEJY3_13670 a2e1cb74e9fa73401b749753ec318808 321 Gene3D G3DSA:1.20.1420.30 35 309 1.7E-86 T 14-10-2018 VEJY3_04370 e3a3fc4f35b31d8167858635a80b7162 425 Gene3D G3DSA:3.30.9.10 122 344 5.9E-73 T 14-10-2018 VEJY3_04370 e3a3fc4f35b31d8167858635a80b7162 425 Gene3D G3DSA:3.50.50.60 30 383 5.9E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04370 e3a3fc4f35b31d8167858635a80b7162 425 SUPERFAMILY SSF51905 30 412 1.42E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04370 e3a3fc4f35b31d8167858635a80b7162 425 Pfam PF01266 FAD dependent oxidoreductase 30 381 3.4E-57 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEJY3_18476 3b916beaaa88e74954f28fa70ae51762 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 228 8.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_18476 3b916beaaa88e74954f28fa70ae51762 238 Gene3D G3DSA:1.10.3720.10 12 233 1.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18476 3b916beaaa88e74954f28fa70ae51762 238 SUPERFAMILY SSF161098 16 219 7.85E-40 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19376 382fa72262e4b53a677a9cdc5b3dc720 377 SUPERFAMILY SSF56300 1 320 3.49E-60 T 14-10-2018 VEJY3_19376 382fa72262e4b53a677a9cdc5b3dc720 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 1.1E-10 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VEJY3_19376 382fa72262e4b53a677a9cdc5b3dc720 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 9.1E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_19376 382fa72262e4b53a677a9cdc5b3dc720 377 Gene3D G3DSA:3.60.21.10 1 265 3.7E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_16511 1002e63ace57988337e0038c6af5c2b4 179 SUPERFAMILY SSF55811 4 176 2.3E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_16511 1002e63ace57988337e0038c6af5c2b4 179 Pfam PF00293 NUDIX domain 44 154 1.1E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_16511 1002e63ace57988337e0038c6af5c2b4 179 Gene3D G3DSA:3.90.79.10 2 177 9.3E-41 T 14-10-2018 VEJY3_04005 dcce4c1ef0743c3bfbee9708f48ca910 399 Pfam PF07670 Nucleoside recognition 87 182 3.4E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEJY3_04005 dcce4c1ef0743c3bfbee9708f48ca910 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 2.8E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEJY3_04005 dcce4c1ef0743c3bfbee9708f48ca910 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.4E-70 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEJY3_02685 6b177f4849e773986358c2959b9a56d4 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.258 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEJY3_02685 6b177f4849e773986358c2959b9a56d4 350 Gene3D G3DSA:2.40.10.240 64 163 9.9E-118 T 14-10-2018 VEJY3_02685 6b177f4849e773986358c2959b9a56d4 350 SUPERFAMILY SSF111337 1 345 4.84E-139 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEJY3_02685 6b177f4849e773986358c2959b9a56d4 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.6E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEJY3_02685 6b177f4849e773986358c2959b9a56d4 350 Gene3D G3DSA:3.40.1780.10 14 345 9.9E-118 T 14-10-2018 VEJY3_10245 570901a23430136cb7419757dac4b629 289 Pfam PF02811 PHP domain 4 132 1.6E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 VEJY3_10245 570901a23430136cb7419757dac4b629 289 SUPERFAMILY SSF89550 1 275 8.24E-55 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEJY3_10245 570901a23430136cb7419757dac4b629 289 Gene3D G3DSA:1.10.150.650 98 169 3.4E-81 T 14-10-2018 VEJY3_10245 570901a23430136cb7419757dac4b629 289 SMART SM00481 3 70 5.8E-19 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEJY3_10245 570901a23430136cb7419757dac4b629 289 Gene3D G3DSA:3.20.20.140 3 250 3.4E-81 T 14-10-2018 VEJY3_14020 d1caec0a3b083712a4cb3a2762c21bb7 129 Pfam PF01250 Ribosomal protein S6 3 91 2.5E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14020 d1caec0a3b083712a4cb3a2762c21bb7 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.194 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_14020 d1caec0a3b083712a4cb3a2762c21bb7 129 SUPERFAMILY SSF54995 1 103 2.35E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_14020 d1caec0a3b083712a4cb3a2762c21bb7 129 Gene3D G3DSA:3.30.70.60 1 92 5.0E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VEJY3_14020 d1caec0a3b083712a4cb3a2762c21bb7 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEJY3_03640 74f787e0e63fbcf703e2b5f9572b8008 465 Gene3D G3DSA:2.40.160.10 35 464 2.3E-19 T 14-10-2018 IPR023614 Porin domain superfamily VEJY3_20061 fa24e60f214eea2a27b08f63df4a5766 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 4.4E-28 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VEJY3_20061 fa24e60f214eea2a27b08f63df4a5766 198 PIRSF PIRSF011489 1 196 1.2E-81 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 Gene3D G3DSA:3.30.70.990 9 94 7.1E-27 T 14-10-2018 IPR035570 UPF0234, N-terminal VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.615 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 SUPERFAMILY SSF89963 88 160 4.97E-29 T 14-10-2018 IPR036183 YajQ-like superfamily VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 SUPERFAMILY SSF89963 2 85 3.01E-30 T 14-10-2018 IPR036183 YajQ-like superfamily VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 Gene3D G3DSA:3.30.70.860 95 160 7.6E-31 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VEJY3_07675 034e2ff62490d85e24706f9d6bf38d4a 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.7E-64 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 Pfam PF01235 Sodium:alanine symporter family 54 448 1.7E-139 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 412 432 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_08150 e27e4b91de4b0f9368a082ca2eeb1e1d 457 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEJY3_01440 bd37662824b2966e679308e3429f11d9 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 3.1E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VEJY3_01440 bd37662824b2966e679308e3429f11d9 190 SUPERFAMILY SSF51206 15 130 3.54E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VEJY3_01440 bd37662824b2966e679308e3429f11d9 190 Gene3D G3DSA:2.60.120.10 6 139 7.7E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_04175 8ccc4b1f00c1a1314a74e8ce8c3496c0 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.3E-117 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_04175 8ccc4b1f00c1a1314a74e8ce8c3496c0 453 PIRSF PIRSF006066 1 447 3.2E-138 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_21591 2897c6c0eba670c66c2495bc06f6a919 55 Pfam PF11216 Protein of unknown function (DUF3012) 24 55 1.1E-19 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VEJY3_07630 c57c667e347956f9b453cc1738c87619 157 SUPERFAMILY SSF55781 4 145 1.77E-39 T 14-10-2018 VEJY3_07630 c57c667e347956f9b453cc1738c87619 157 Gene3D G3DSA:3.30.450.40 2 157 2.2E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_07630 c57c667e347956f9b453cc1738c87619 157 Pfam PF13185 GAF domain 30 145 7.7E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VEJY3_07630 c57c667e347956f9b453cc1738c87619 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18581 cce9a1256961046c019ca75af4691490 252 Gene3D G3DSA:3.40.50.720 1 252 2.3E-71 T 14-10-2018 VEJY3_18581 cce9a1256961046c019ca75af4691490 252 SUPERFAMILY SSF51735 1 252 9.46E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18581 cce9a1256961046c019ca75af4691490 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEJY3_18581 cce9a1256961046c019ca75af4691490 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.6E-4 T 14-10-2018 VEJY3_18581 cce9a1256961046c019ca75af4691490 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 4.7E-52 T 14-10-2018 VEJY3_11410 b113b5a44edfab38413c94adcbe38b89 404 SUPERFAMILY SSF48452 161 264 1.73E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_11410 b113b5a44edfab38413c94adcbe38b89 404 Gene3D G3DSA:1.25.40.10 153 292 6.3E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_11410 b113b5a44edfab38413c94adcbe38b89 404 Pfam PF14559 Tetratricopeptide repeat 176 244 9.0E-8 T 14-10-2018 VEJY3_18436 85ff3c633cdbaf6d23d0a6e48efaa08a 200 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 11 187 5.5E-31 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEJY3_18436 85ff3c633cdbaf6d23d0a6e48efaa08a 200 Gene3D G3DSA:3.40.50.150 1 200 1.3E-40 T 14-10-2018 VEJY3_18436 85ff3c633cdbaf6d23d0a6e48efaa08a 200 SUPERFAMILY SSF53335 7 199 4.1E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14100 a5a051f64764cd2bbeb03ac9b05a7a65 263 PIRSF PIRSF000728 1 263 5.5E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_14100 a5a051f64764cd2bbeb03ac9b05a7a65 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.131 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEJY3_14100 a5a051f64764cd2bbeb03ac9b05a7a65 263 SUPERFAMILY SSF53633 5 262 1.05E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_14100 a5a051f64764cd2bbeb03ac9b05a7a65 263 Pfam PF00696 Amino acid kinase family 9 238 6.5E-37 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEJY3_14100 a5a051f64764cd2bbeb03ac9b05a7a65 263 Gene3D G3DSA:3.40.1160.10 4 260 1.1E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEJY3_24171 3943524289a4545bbecb5912276957dd 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 2.0E-38 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 VEJY3_22191 207e705bf036c914ab59a19554470598 156 Gene3D G3DSA:2.60.120.370 1 154 4.3E-34 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VEJY3_22191 207e705bf036c914ab59a19554470598 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 2.5E-33 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VEJY3_22191 207e705bf036c914ab59a19554470598 156 SUPERFAMILY SSF51197 1 153 4.67E-33 T 14-10-2018 VEJY3_17471 52968a66ee9ae261f1ddd13b35a5dc39 420 Gene3D G3DSA:1.20.1740.10 1 419 1.6E-60 T 14-10-2018 VEJY3_17471 52968a66ee9ae261f1ddd13b35a5dc39 420 Pfam PF13520 Amino acid permease 8 366 1.2E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_17471 52968a66ee9ae261f1ddd13b35a5dc39 420 PIRSF PIRSF006060 1 418 1.1E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_16786 966814dd7f9fe8a63a7dc38f13d614f6 76 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 1.8E-19 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 SUPERFAMILY SSF88946 2 107 2.04E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 SUPERFAMILY SSF88659 124 185 1.35E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 Gene3D G3DSA:1.10.1740.10 1 121 1.4E-45 T 14-10-2018 VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 Gene3D G3DSA:1.10.10.10 122 192 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13295 cc84b6e78a845c5372ff83dbb849878d 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEJY3_23936 d843b03fa347b14d06676faf8055c132 483 Pfam PF00474 Sodium:solute symporter family 32 430 3.7E-90 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_23936 d843b03fa347b14d06676faf8055c132 483 Gene3D G3DSA:1.20.1730.10 4 483 1.3E-88 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 SUPERFAMILY SSF46785 2 85 9.6E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 Pfam PF03466 LysR substrate binding domain 96 288 5.1E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 Gene3D G3DSA:3.40.190.290 95 293 2.0E-8 T 14-10-2018 VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 SUPERFAMILY SSF53850 90 288 1.72E-24 T 14-10-2018 VEJY3_02385 e6be21ba5891fa4b3cdb08047db8540b 296 Gene3D G3DSA:1.10.10.10 4 92 4.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06875 27aea30e7200fcd9d5f6179e40028a7c 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.843 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06875 27aea30e7200fcd9d5f6179e40028a7c 101 Pfam PF00699 Urease beta subunit 3 100 4.7E-45 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06875 27aea30e7200fcd9d5f6179e40028a7c 101 SUPERFAMILY SSF51278 1 101 7.19E-47 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06875 27aea30e7200fcd9d5f6179e40028a7c 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 3.3E-45 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_06875 27aea30e7200fcd9d5f6179e40028a7c 101 Gene3D G3DSA:2.10.150.10 1 101 3.5E-48 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.542 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 Gene3D G3DSA:3.40.1190.20 1 300 2.4E-106 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 PRINTS PR00990 Ribokinase signature 217 228 3.0E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 PRINTS PR00990 Ribokinase signature 6 27 3.0E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 PRINTS PR00990 Ribokinase signature 33 52 3.0E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 PRINTS PR00990 Ribokinase signature 173 188 3.0E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 PRINTS PR00990 Ribokinase signature 105 118 3.0E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 6.9E-76 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VEJY3_18966 2827068535fe6a12b39de3ea655a8512 306 SUPERFAMILY SSF53613 1 302 2.03E-86 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 200 437 2.0E-16 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 92 115 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 Gene3D G3DSA:3.90.380.10 27 437 1.3E-109 T 14-10-2018 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 4.2E-43 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 SUPERFAMILY SSF55961 168 446 9.42E-67 T 14-10-2018 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 SUPERFAMILY SSF50022 14 167 5.24E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 Pfam PF00355 Rieske [2Fe-2S] domain 49 133 4.2E-23 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEJY3_17911 3270bc0f59ad31e890fb9ed8a525acd9 458 Gene3D G3DSA:2.102.10.10 49 176 1.3E-109 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEJY3_17731 eef225dc7341c40e302c25e3ff46668a 333 Gene3D G3DSA:1.10.10.60 8 59 2.0E-18 T 14-10-2018 VEJY3_17731 eef225dc7341c40e302c25e3ff46668a 333 Pfam PF04198 Putative sugar-binding domain 66 320 2.7E-73 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VEJY3_17731 eef225dc7341c40e302c25e3ff46668a 333 Gene3D G3DSA:3.40.50.1360 60 325 3.2E-78 T 14-10-2018 VEJY3_17731 eef225dc7341c40e302c25e3ff46668a 333 SUPERFAMILY SSF100950 70 320 5.53E-61 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_23601 fb4b1072d0379e3169801846481f8cec 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.3E-17 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 VEJY3_14655 3960496e36bb607f7fb26f1d1bf46094 248 Pfam PF05036 Sporulation related domain 151 231 2.1E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_14655 3960496e36bb607f7fb26f1d1bf46094 248 SUPERFAMILY SSF110997 150 231 2.88E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEJY3_11400 6d851da0a4b285918858e69b5e4663fc 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 10 422 2.1E-130 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_11400 6d851da0a4b285918858e69b5e4663fc 422 SUPERFAMILY SSF56935 17 422 4.58E-101 T 14-10-2018 VEJY3_11400 6d851da0a4b285918858e69b5e4663fc 422 Gene3D G3DSA:2.40.160.60 17 422 1.4E-123 T 14-10-2018 VEJY3_14585 3bedab57f9a5928b651decd31a67756c 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 4.7E-258 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VEJY3_14585 3bedab57f9a5928b651decd31a67756c 575 Gene3D G3DSA:1.20.1730.10 21 329 5.6E-35 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_14585 3bedab57f9a5928b651decd31a67756c 575 Gene3D G3DSA:1.20.1730.10 343 555 1.1E-26 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_14585 3bedab57f9a5928b651decd31a67756c 575 Pfam PF00474 Sodium:solute symporter family 33 296 2.8E-36 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_14585 3bedab57f9a5928b651decd31a67756c 575 Pfam PF00474 Sodium:solute symporter family 373 491 4.2E-16 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_12310 017948a00a50968079abcb9e540a7bee 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 2.6E-46 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VEJY3_12310 017948a00a50968079abcb9e540a7bee 142 SUPERFAMILY SSF82649 4 141 1.67E-49 T 14-10-2018 VEJY3_12310 017948a00a50968079abcb9e540a7bee 142 Gene3D G3DSA:3.90.1010.10 1 142 1.1E-51 T 14-10-2018 VEJY3_14200 850105a914ca75e9036aca321f75407d 260 SUPERFAMILY SSF54534 47 254 2.55E-64 T 14-10-2018 VEJY3_14200 850105a914ca75e9036aca321f75407d 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 252 3.8E-30 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_14200 850105a914ca75e9036aca321f75407d 260 Gene3D G3DSA:1.10.287.460 32 148 3.2E-32 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VEJY3_14200 850105a914ca75e9036aca321f75407d 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 158 5.1E-34 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEJY3_14200 850105a914ca75e9036aca321f75407d 260 Gene3D G3DSA:3.10.50.40 149 260 3.5E-43 T 14-10-2018 VEJY3_17786 d6ce14c5e28bdb3f04315db65c88c2ac 141 Gene3D G3DSA:1.10.260.40 2 66 1.3E-5 T 14-10-2018 VEJY3_17786 d6ce14c5e28bdb3f04315db65c88c2ac 141 SUPERFAMILY SSF47413 2 61 1.76E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_15821 a6c5c86237e9e7639c6324ac1ac2a502 422 Pfam PF02687 FtsX-like permease family 315 411 1.0E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_15821 a6c5c86237e9e7639c6324ac1ac2a502 422 Pfam PF12704 MacB-like periplasmic core domain 23 248 1.1E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VEJY3_14400 54058231b8fa57005b98f9ff846d76d0 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 465 2.7E-48 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEJY3_12845 ddc132301d333e5b571e142a13c76f7a 298 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.2E-47 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VEJY3_12845 ddc132301d333e5b571e142a13c76f7a 298 SUPERFAMILY SSF53067 114 283 1.04E-43 T 14-10-2018 VEJY3_12845 ddc132301d333e5b571e142a13c76f7a 298 Gene3D G3DSA:3.30.420.40 4 114 3.6E-69 T 14-10-2018 VEJY3_12845 ddc132301d333e5b571e142a13c76f7a 298 SUPERFAMILY SSF53067 2 111 1.03E-23 T 14-10-2018 VEJY3_12845 ddc132301d333e5b571e142a13c76f7a 298 Gene3D G3DSA:3.30.420.40 115 261 3.6E-69 T 14-10-2018 VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 Pfam PF12464 Maltose acetyltransferase 6 57 1.8E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 Gene3D G3DSA:2.160.10.10 1 184 3.4E-69 T 14-10-2018 VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 7.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 SMART SM01266 4 58 5.7E-17 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 SUPERFAMILY SSF51161 3 182 9.15E-55 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VEJY3_07785 d2666ec9b054d1494d57e13c8a8c8b57 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 75 109 0.081 T 14-10-2018 IPR001451 Hexapeptide repeat VEJY3_04745 2240634db56f3c412a082c8922151cd4 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 1.5E-42 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 VEJY3_04745 2240634db56f3c412a082c8922151cd4 82 Gene3D G3DSA:1.10.1900.30 8 76 1.2E-36 T 14-10-2018 IPR038191 YciN superfamily VEJY3_13025 c5e05106755bb693776e499fdf3b2d4a 153 SUPERFAMILY SSF54523 12 150 8.89E-20 T 14-10-2018 VEJY3_13025 c5e05106755bb693776e499fdf3b2d4a 153 Pfam PF00114 Pilin (bacterial filament) 41 139 8.6E-6 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VEJY3_13025 c5e05106755bb693776e499fdf3b2d4a 153 Gene3D G3DSA:3.30.700.10 12 151 2.5E-26 T 14-10-2018 VEJY3_13025 c5e05106755bb693776e499fdf3b2d4a 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_13025 c5e05106755bb693776e499fdf3b2d4a 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.9E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00045 2b9c775dcfbc9b5071564585a27e335b 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_00045 2b9c775dcfbc9b5071564585a27e335b 223 SUPERFAMILY SSF161098 13 203 2.75E-43 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_00045 2b9c775dcfbc9b5071564585a27e335b 223 Gene3D G3DSA:1.10.3720.10 1 222 5.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09345 169636ee634a813909af80847a6c99fe 450 Pfam PF01554 MatE 249 405 7.6E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_09345 169636ee634a813909af80847a6c99fe 450 Pfam PF01554 MatE 20 180 1.7E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_09345 169636ee634a813909af80847a6c99fe 450 PIRSF PIRSF006603 3 448 8.8E-69 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_01825 c3073c4ef6f3fa3a64f60c2dc2ae5707 147 SUPERFAMILY SSF89095 1 146 5.23E-45 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VEJY3_01825 c3073c4ef6f3fa3a64f60c2dc2ae5707 147 Gene3D G3DSA:1.10.10.410 91 147 2.7E-20 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VEJY3_01825 c3073c4ef6f3fa3a64f60c2dc2ae5707 147 Pfam PF09424 Yqey-like protein 5 146 8.3E-58 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VEJY3_01825 c3073c4ef6f3fa3a64f60c2dc2ae5707 147 Gene3D G3DSA:1.10.1510.10 1 90 3.1E-28 T 14-10-2018 VEJY3_14450 ee10b55521ca5145e287d9e6b1faed9f 124 Pfam PF04892 VanZ like family 36 109 2.1E-7 T 14-10-2018 IPR006976 VanZ-like VEJY3_18736 d1cf61296c1d425dbf174ee7b4dea22e 96 SUPERFAMILY SSF46548 7 92 3.92E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEJY3_18736 d1cf61296c1d425dbf174ee7b4dea22e 96 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_18736 d1cf61296c1d425dbf174ee7b4dea22e 96 Pfam PF14697 4Fe-4S dicluster domain 21 88 6.1E-11 T 14-10-2018 VEJY3_18736 d1cf61296c1d425dbf174ee7b4dea22e 96 Gene3D G3DSA:3.30.70.20 11 94 6.3E-12 T 14-10-2018 VEJY3_17056 93f1b3c1b8719e5cdb8ba497020117e5 467 Pfam PF00860 Permease family 22 410 2.6E-91 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEJY3_17056 93f1b3c1b8719e5cdb8ba497020117e5 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 SUPERFAMILY SSF46785 11 79 2.22E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 2.4E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 SMART SM00346 9 99 0.0041 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 SUPERFAMILY SSF55781 81 240 7.19E-32 T 14-10-2018 VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 Gene3D G3DSA:3.30.450.40 80 240 9.9E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 Pfam PF08279 HTH domain 18 56 9.0E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VEJY3_21741 1bcd129974ff6f6544f6b16324ecf7ee 244 Gene3D G3DSA:1.10.10.10 9 79 4.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_07890 1788b02fa6f7c33acc97c0ca81aaf6ae 323 Gene3D G3DSA:3.40.190.10 118 256 1.3E-110 T 14-10-2018 VEJY3_07890 1788b02fa6f7c33acc97c0ca81aaf6ae 323 Gene3D G3DSA:3.40.190.10 31 320 1.3E-110 T 14-10-2018 VEJY3_07890 1788b02fa6f7c33acc97c0ca81aaf6ae 323 Pfam PF16868 NMT1-like family 31 320 7.9E-99 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEJY3_07890 1788b02fa6f7c33acc97c0ca81aaf6ae 323 SUPERFAMILY SSF53850 27 322 4.02E-91 T 14-10-2018 VEJY3_09830 6f3c1e8af3dcaf668c1489cd4d24c03d 101 SUPERFAMILY SSF52309 2 95 2.81E-24 T 14-10-2018 VEJY3_09830 6f3c1e8af3dcaf668c1489cd4d24c03d 101 Pfam PF14359 Domain of unknown function (DUF4406) 4 92 6.9E-34 T 14-10-2018 IPR025518 Protein of unknown function DUF4406 VEJY3_09830 6f3c1e8af3dcaf668c1489cd4d24c03d 101 Gene3D G3DSA:3.40.50.450 1 95 3.1E-9 T 14-10-2018 VEJY3_17741 073ee5be368742693d6b29204d2bfb3f 631 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 119 533 4.7E-85 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_09210 1ee32cbe567d05b238ad6b8b15d15328 98 Pfam PF01548 Transposase 12 88 1.5E-8 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 Gene3D G3DSA:3.40.640.10 47 298 4.7E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 Gene3D G3DSA:3.90.1150.10 21 402 4.7E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 SUPERFAMILY SSF53383 9 430 3.42E-180 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 PIRSF PIRSF000412 4 431 5.5E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 52.976 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_20206 ea5f9ecd07b3773be39b1fe8b53300b1 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 2.1E-174 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 Pfam PF13431 Tetratricopeptide repeat 95 126 1.1E-5 T 14-10-2018 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 Pfam PF14559 Tetratricopeptide repeat 154 197 6.7E-6 T 14-10-2018 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 SUPERFAMILY SSF81901 34 201 1.44E-21 T 14-10-2018 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 Gene3D G3DSA:1.25.40.10 37 240 2.4E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 SMART SM00028 39 72 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 SMART SM00028 73 106 2.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 SMART SM00028 143 176 0.74 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_08215 a9981097194436e429dd52c8a0944828 240 SMART SM00028 107 140 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_23666 a77616d30bdcdfd4d7d86f90fdb8c503 213 Pfam PF01914 MarC family integral membrane protein 8 207 1.4E-52 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 SMART SM00342 198 281 7.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 SUPERFAMILY SSF46689 182 229 4.6E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 Gene3D G3DSA:1.10.10.60 181 230 3.4E-11 T 14-10-2018 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 Pfam PF12833 Helix-turn-helix domain 204 281 9.4E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 SUPERFAMILY SSF46689 234 282 1.11E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_17981 3a58c9d83b6a1cfd31118e1b22441ddc 292 Gene3D G3DSA:1.10.10.60 231 288 6.6E-15 T 14-10-2018 VEJY3_02500 eec9435ee5c94971e62dbfd4fc0f8d82 177 Gene3D G3DSA:3.90.950.10 1 176 9.7E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_02500 eec9435ee5c94971e62dbfd4fc0f8d82 177 Pfam PF01931 Protein of unknown function DUF84 9 167 1.7E-57 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VEJY3_02500 eec9435ee5c94971e62dbfd4fc0f8d82 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 29.786 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VEJY3_02500 eec9435ee5c94971e62dbfd4fc0f8d82 177 SUPERFAMILY SSF52972 4 173 1.48E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_17456 385be83c7e230057a30877fbf4b11b06 440 Pfam PF03109 ABC1 family 115 230 4.6E-28 T 14-10-2018 IPR004147 UbiB domain VEJY3_17456 385be83c7e230057a30877fbf4b11b06 440 SUPERFAMILY SSF56112 99 330 7.91E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_10435 a3a84c0ea15219a063b7854325903ba5 485 PIRSF PIRSF005522 1 484 2.3E-221 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 VEJY3_10435 a3a84c0ea15219a063b7854325903ba5 485 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 457 1.9E-164 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 VEJY3_10435 a3a84c0ea15219a063b7854325903ba5 485 Gene3D G3DSA:3.40.50.11290 219 316 9.2E-40 T 14-10-2018 VEJY3_10435 a3a84c0ea15219a063b7854325903ba5 485 SUPERFAMILY SSF56059 24 472 4.09E-64 T 14-10-2018 VEJY3_10435 a3a84c0ea15219a063b7854325903ba5 485 Gene3D G3DSA:3.30.1490.270 353 413 1.7E-26 T 14-10-2018 VEJY3_05920 89e91bfa68ba33e632c84b8522677b8c 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_05920 89e91bfa68ba33e632c84b8522677b8c 223 Gene3D G3DSA:3.40.50.300 1 223 1.6E-58 T 14-10-2018 VEJY3_05920 89e91bfa68ba33e632c84b8522677b8c 223 Pfam PF00005 ABC transporter 21 167 6.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_05920 89e91bfa68ba33e632c84b8522677b8c 223 SMART SM00382 30 218 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_05920 89e91bfa68ba33e632c84b8522677b8c 223 SUPERFAMILY SSF52540 1 217 2.13E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_07340 4118a63bab3d39f4938931d671af9a42 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VEJY3_22356 1f498cbe7835f0e0cd703e5197f8be21 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 1.7E-92 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_22356 1f498cbe7835f0e0cd703e5197f8be21 366 Gene3D G3DSA:3.20.20.70 1 365 1.2E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_22356 1f498cbe7835f0e0cd703e5197f8be21 366 SUPERFAMILY SSF51395 3 365 2.23E-122 T 14-10-2018 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 Pfam PF01047 MarR family 31 88 4.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 SMART SM00347 23 124 3.1E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 2.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_18511 7dced1914888f714fb6044823bba0598 140 SUPERFAMILY SSF46785 6 138 1.25E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_18511 7dced1914888f714fb6044823bba0598 140 Gene3D G3DSA:1.10.10.10 5 140 1.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_18511 7dced1914888f714fb6044823bba0598 140 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEJY3_17161 3518c91eae6e34edb7bf31a8d64dd90c 291 SUPERFAMILY SSF51621 2 235 5.1E-63 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_17161 3518c91eae6e34edb7bf31a8d64dd90c 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 1.0E-82 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 VEJY3_17161 3518c91eae6e34edb7bf31a8d64dd90c 291 PIRSF PIRSF015582 1 291 4.8E-76 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like VEJY3_17161 3518c91eae6e34edb7bf31a8d64dd90c 291 Gene3D G3DSA:3.20.20.60 1 289 1.8E-91 T 14-10-2018 VEJY3_20226 a2c197d96e6de9f665b5c55b019a7b07 115 Gene3D G3DSA:1.20.120.160 1 112 1.7E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_20226 a2c197d96e6de9f665b5c55b019a7b07 115 SUPERFAMILY SSF47226 1 110 9.29E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_22436 feeec685180b015c83859a44584c3bc8 202 Pfam PF02311 AraC-like ligand binding domain 3 64 6.2E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEJY3_08575 2cfe39af9f6d554731422f3c09db9c31 459 Pfam PF03553 Na+/H+ antiporter family 173 454 3.8E-8 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_06985 5205a46646126006fb257af28ce53c32 524 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VEJY3_06985 5205a46646126006fb257af28ce53c32 524 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 501 3.6E-151 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_05165 78de7cb307e3f6a5691766dd0ad42f00 299 Gene3D G3DSA:3.40.50.620 1 191 5.2E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEJY3_05165 78de7cb307e3f6a5691766dd0ad42f00 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 9 126 1.3E-9 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VEJY3_05165 78de7cb307e3f6a5691766dd0ad42f00 299 SUPERFAMILY SSF52402 8 180 1.39E-17 T 14-10-2018 VEJY3_23156 84ef4a8cfab5d01ff92d5c8664497c48 129 Pfam PF04892 VanZ like family 43 122 9.5E-9 T 14-10-2018 IPR006976 VanZ-like VEJY3_06740 05286a5f2ae6d89edecbd75585d90360 479 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 445 1.2E-86 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VEJY3_06740 05286a5f2ae6d89edecbd75585d90360 479 Gene3D G3DSA:1.10.4160.10 3 478 2.3E-107 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VEJY3_14140 7b7c50a5bf6d4ce0185abdc2b9f2b1f1 106 Gene3D G3DSA:1.10.140.10 2 105 6.7E-57 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VEJY3_14140 7b7c50a5bf6d4ce0185abdc2b9f2b1f1 106 SUPERFAMILY SSF47598 3 104 4.67E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VEJY3_14140 7b7c50a5bf6d4ce0185abdc2b9f2b1f1 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.305 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEJY3_14140 7b7c50a5bf6d4ce0185abdc2b9f2b1f1 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.7E-59 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEJY3_14140 7b7c50a5bf6d4ce0185abdc2b9f2b1f1 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 2.0E-48 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEJY3_19176 a3e82c559759fe9c14075d6a732b1a3e 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 1.2E-26 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_06490 135b464b0976163c45d842bffa19f209 357 Gene3D G3DSA:3.10.180.10 158 355 3.4E-70 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_06490 135b464b0976163c45d842bffa19f209 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 2.0E-56 T 14-10-2018 VEJY3_06490 135b464b0976163c45d842bffa19f209 357 SUPERFAMILY SSF54593 5 341 1.51E-79 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_06490 135b464b0976163c45d842bffa19f209 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 6.0E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_06490 135b464b0976163c45d842bffa19f209 357 Gene3D G3DSA:3.10.180.10 3 155 9.8E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_06490 135b464b0976163c45d842bffa19f209 357 PIRSF PIRSF009283 1 355 2.3E-126 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VEJY3_08600 79200938fe3b0db9ce7906679cf09fc2 301 Gene3D G3DSA:3.20.20.150 1 296 5.1E-31 T 14-10-2018 VEJY3_08600 79200938fe3b0db9ce7906679cf09fc2 301 SUPERFAMILY SSF51658 10 260 5.11E-36 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VEJY3_08600 79200938fe3b0db9ce7906679cf09fc2 301 Pfam PF01261 Xylose isomerase-like TIM barrel 22 245 6.0E-27 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEJY3_16901 09b976dbbde7e9d8e7bd13eea1279809 496 Gene3D G3DSA:2.20.200.10 99 374 1.8E-107 T 14-10-2018 VEJY3_16901 09b976dbbde7e9d8e7bd13eea1279809 496 Pfam PF02321 Outer membrane efflux protein 62 273 7.2E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_16901 09b976dbbde7e9d8e7bd13eea1279809 496 Pfam PF02321 Outer membrane efflux protein 303 483 1.7E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_16901 09b976dbbde7e9d8e7bd13eea1279809 496 Gene3D G3DSA:1.20.1600.10 53 486 1.8E-107 T 14-10-2018 VEJY3_16901 09b976dbbde7e9d8e7bd13eea1279809 496 SUPERFAMILY SSF56954 1 487 5.62E-90 T 14-10-2018 VEJY3_22691 fe9240b813e9b078361d7561cd531562 103 SUPERFAMILY SSF46689 6 96 4.84E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_22691 fe9240b813e9b078361d7561cd531562 103 Pfam PF01527 Transposase 4 76 2.0E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VEJY3_22691 fe9240b813e9b078361d7561cd531562 103 Gene3D G3DSA:1.10.10.60 10 94 5.6E-10 T 14-10-2018 VEJY3_05260 b7d7d6c8886d5c7ff59737e8f771bb6d 241 Gene3D G3DSA:3.40.50.300 61 217 3.8E-6 T 14-10-2018 VEJY3_05260 b7d7d6c8886d5c7ff59737e8f771bb6d 241 SUPERFAMILY SSF52540 90 168 9.43E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00230 3e0af3cfdcee7340f7ecbdb185aaf287 324 Pfam PF05036 Sporulation related domain 72 132 1.6E-4 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEJY3_21401 709708eb42cbfbd04b11888386cd3816 116 SUPERFAMILY SSF50891 1 115 1.55E-30 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VEJY3_21401 709708eb42cbfbd04b11888386cd3816 116 Gene3D G3DSA:2.40.100.20 1 114 7.7E-17 T 14-10-2018 VEJY3_21401 709708eb42cbfbd04b11888386cd3816 116 Pfam PF04126 Cyclophilin-like 1 103 2.4E-5 T 14-10-2018 IPR025658 Cyclophilin TM1367-like domain VEJY3_23131 0aa9dedc1f1c1b2a1cdbce76ac633742 348 Gene3D G3DSA:3.40.50.2000 15 335 2.2E-58 T 14-10-2018 VEJY3_23131 0aa9dedc1f1c1b2a1cdbce76ac633742 348 Pfam PF00534 Glycosyl transferases group 1 173 315 3.0E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_23131 0aa9dedc1f1c1b2a1cdbce76ac633742 348 Gene3D G3DSA:3.40.50.2000 155 328 2.2E-58 T 14-10-2018 VEJY3_23131 0aa9dedc1f1c1b2a1cdbce76ac633742 348 SUPERFAMILY SSF53756 2 344 2.39E-71 T 14-10-2018 VEJY3_23131 0aa9dedc1f1c1b2a1cdbce76ac633742 348 Pfam PF13439 Glycosyltransferase Family 4 14 159 3.8E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_24046 07bc7c6e6656a4d83d66800ee6f9d678 541 Pfam PF00916 Sulfate permease family 27 395 1.8E-94 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEJY3_24046 07bc7c6e6656a4d83d66800ee6f9d678 541 SUPERFAMILY SSF52091 436 509 6.47E-8 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_24046 07bc7c6e6656a4d83d66800ee6f9d678 541 Gene3D G3DSA:3.30.750.24 431 532 1.8E-8 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 Gene3D G3DSA:3.40.50.1970 1 176 1.5E-65 T 14-10-2018 VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 Pfam PF01761 3-dehydroquinate synthase 72 329 2.4E-111 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 Gene3D G3DSA:1.20.1090.10 177 366 3.5E-70 T 14-10-2018 VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 PIRSF PIRSF001455 22 365 4.1E-107 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 SUPERFAMILY SSF56796 4 361 1.09E-117 T 14-10-2018 VEJY3_14040 c754cc0c60ec65047fe66c6411f2475f 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.673 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEJY3_01790 8e0ef82199d88fdb71d160f9ab2d6066 257 Pfam PF00563 EAL domain 23 231 5.4E-23 T 14-10-2018 IPR001633 EAL domain VEJY3_01790 8e0ef82199d88fdb71d160f9ab2d6066 257 SUPERFAMILY SSF141868 23 235 1.28E-28 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_01790 8e0ef82199d88fdb71d160f9ab2d6066 257 SMART SM00052 12 236 1.0E-5 T 14-10-2018 IPR001633 EAL domain VEJY3_01790 8e0ef82199d88fdb71d160f9ab2d6066 257 Gene3D G3DSA:3.20.20.450 9 237 4.4E-25 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 SUPERFAMILY SSF52172 3 177 4.41E-35 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 Gene3D G3DSA:3.40.50.2300 1 123 6.0E-32 T 14-10-2018 VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 SMART SM00448 3 113 4.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 Gene3D G3DSA:1.10.10.10 124 228 4.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 SMART SM00862 148 224 4.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_20731 c8eaddb4fe5ffbae6b2342bd261c1b48 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEJY3_00035 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00035 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00035 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_00035 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01845 323749531105d309a05bafd1f4ec7854 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 3.6E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEJY3_01845 323749531105d309a05bafd1f4ec7854 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.988 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEJY3_01845 323749531105d309a05bafd1f4ec7854 203 SMART SM01207 10 185 2.6E-84 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEJY3_21791 154a5b2cdad12d2de77dd6a9c1feaa9e 589 Gene3D G3DSA:2.130.10.10 46 301 1.3E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEJY3_21791 154a5b2cdad12d2de77dd6a9c1feaa9e 589 SUPERFAMILY SSF75011 80 517 2.22E-14 T 14-10-2018 VEJY3_23111 5672c7ff36d2c1d453a0c438029ac499 404 SUPERFAMILY SSF56935 66 395 3.48E-5 T 14-10-2018 VEJY3_23111 5672c7ff36d2c1d453a0c438029ac499 404 Pfam PF10082 Putative beta-barrel porin 2 33 399 6.0E-25 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 VEJY3_00970 236425821eada8f112d8bef21119305a 224 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 24 218 3.1E-53 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VEJY3_00970 236425821eada8f112d8bef21119305a 224 Gene3D G3DSA:2.40.360.10 25 223 5.0E-56 T 14-10-2018 IPR023373 YmcC-like superfamily VEJY3_00970 236425821eada8f112d8bef21119305a 224 SUPERFAMILY SSF159270 27 222 5.23E-54 T 14-10-2018 IPR023373 YmcC-like superfamily VEJY3_22961 bc09569a6cfef61d0a3424f9d26adf59 104 Pfam PF12844 Helix-turn-helix domain 9 70 3.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_22961 bc09569a6cfef61d0a3424f9d26adf59 104 Gene3D G3DSA:1.10.260.40 7 99 7.7E-22 T 14-10-2018 VEJY3_22961 bc09569a6cfef61d0a3424f9d26adf59 104 SUPERFAMILY SSF47413 5 74 3.94E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_22961 bc09569a6cfef61d0a3424f9d26adf59 104 SMART SM00530 10 69 7.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_20751 1e898f674a912ac1005bbd99c42c0524 322 Gene3D G3DSA:1.20.58.1130 9 205 5.0E-89 T 14-10-2018 VEJY3_20751 1e898f674a912ac1005bbd99c42c0524 322 Pfam PF01699 Sodium/calcium exchanger protein 173 316 1.7E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEJY3_20751 1e898f674a912ac1005bbd99c42c0524 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 5.2E-23 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEJY3_20751 1e898f674a912ac1005bbd99c42c0524 322 Gene3D G3DSA:1.20.1420.30 35 311 5.0E-89 T 14-10-2018 VEJY3_09610 047ef71dd7fd01b97e24b09916bfa161 434 Pfam PF13289 SIR2-like domain 117 254 4.6E-23 T 14-10-2018 IPR039444 SIR2-like domain VEJY3_24166 1d43f4aba36bca62757f84a4c016896b 464 SUPERFAMILY SSF103473 15 417 1.96E-36 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_24166 1d43f4aba36bca62757f84a4c016896b 464 Pfam PF13347 MFS/sugar transport protein 13 432 1.2E-99 T 14-10-2018 VEJY3_24166 1d43f4aba36bca62757f84a4c016896b 464 Gene3D G3DSA:1.20.1250.20 12 416 2.2E-29 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.420.20 104 115 3.1E-9 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Pfam PF11604 Copper binding periplasmic protein CusF 502 567 1.0E-19 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Pfam PF11604 Copper binding periplasmic protein CusF 422 487 4.0E-22 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.50.320 498 569 7.5E-17 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.50.320 419 488 1.2E-19 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:1.10.287.470 165 177 3.1E-9 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.50.100 130 164 3.1E-9 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.50.100 207 248 2.9E-28 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.420.20 328 418 8.9E-22 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 SUPERFAMILY SSF111369 135 326 2.09E-16 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.30.170 249 322 2.9E-28 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Gene3D G3DSA:2.40.30.170 116 129 3.1E-9 T 14-10-2018 VEJY3_22136 233d8e8bc28121ece4f326a8009f5752 571 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 5.0E-78 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_10250 c719eab7bec187c60f2a3f34a7267920 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 9.0E-6 T 14-10-2018 IPR012639 Tryptophan operon leader peptide VEJY3_10250 c719eab7bec187c60f2a3f34a7267920 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 3.7E-27 T 14-10-2018 IPR012639 Tryptophan operon leader peptide VEJY3_22666 663a7e769496c42256fbd9e6e91b8633 357 SUPERFAMILY SSF52091 6 83 6.67E-11 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_22666 663a7e769496c42256fbd9e6e91b8633 357 Gene3D G3DSA:3.30.750.24 2 84 8.0E-8 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_22666 663a7e769496c42256fbd9e6e91b8633 357 Pfam PF13466 STAS domain 8 82 1.5E-8 T 14-10-2018 IPR002645 STAS domain VEJY3_22666 663a7e769496c42256fbd9e6e91b8633 357 Pfam PF02405 Permease MlaE 150 355 3.5E-66 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VEJY3_05305 c19f2a1c25f2a0522114be1ff74078bd 375 Pfam PF13391 HNH endonuclease 277 329 2.6E-6 T 14-10-2018 IPR003615 HNH nuclease VEJY3_20141 6e87a2d5fc843c73d28f0ddc91db6902 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 7.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_20141 6e87a2d5fc843c73d28f0ddc91db6902 306 Gene3D G3DSA:1.10.3720.10 66 303 7.0E-50 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20141 6e87a2d5fc843c73d28f0ddc91db6902 306 SUPERFAMILY SSF161098 72 292 6.54E-40 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_17806 b7855a34ce2b693d89bc1101c8610d3c 71 SUPERFAMILY SSF56349 4 63 7.46E-13 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_17806 b7855a34ce2b693d89bc1101c8610d3c 71 Pfam PF00589 Phage integrase family 24 54 2.7E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_17806 b7855a34ce2b693d89bc1101c8610d3c 71 Gene3D G3DSA:1.10.443.10 22 71 2.7E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_06505 76d34ab84bd505336635359824bdf593 222 Gene3D G3DSA:1.20.1050.10 89 222 7.6E-43 T 14-10-2018 VEJY3_06505 76d34ab84bd505336635359824bdf593 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 4.7E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_06505 76d34ab84bd505336635359824bdf593 222 Gene3D G3DSA:3.40.30.10 7 85 2.1E-26 T 14-10-2018 VEJY3_06505 76d34ab84bd505336635359824bdf593 222 SUPERFAMILY SSF52833 4 90 8.53E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_06505 76d34ab84bd505336635359824bdf593 222 SUPERFAMILY SSF47616 88 220 8.95E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_01695 afcc96375a03187bce313cfce484c5b0 277 Gene3D G3DSA:2.30.30.40 145 208 6.9E-9 T 14-10-2018 VEJY3_01695 afcc96375a03187bce313cfce484c5b0 277 Pfam PF08239 Bacterial SH3 domain 149 201 1.2E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VEJY3_12660 c98be096c9fda3232b9cc2f19cb42fe8 448 PIRSF PIRSF006603 1 438 1.5E-64 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_12660 c98be096c9fda3232b9cc2f19cb42fe8 448 Pfam PF01554 MatE 240 398 2.7E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_12660 c98be096c9fda3232b9cc2f19cb42fe8 448 Pfam PF01554 MatE 15 176 4.0E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 39 125 2.8E-25 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 Gene3D G3DSA:3.40.50.720 50 127 6.4E-24 T 14-10-2018 VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 SUPERFAMILY SSF52540 1 333 2.97E-112 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 Gene3D G3DSA:3.40.50.300 128 333 4.5E-75 T 14-10-2018 VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 PIRSF PIRSF026760 3 334 1.5E-103 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VEJY3_22331 5ad1910f74e838252aece69cfde3045d 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 328 7.4E-75 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VEJY3_16156 eedf425a8d71019e47c0097499900d33 156 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 130 4.1E-12 T 14-10-2018 VEJY3_16156 eedf425a8d71019e47c0097499900d33 156 Gene3D G3DSA:3.40.50.1000 1 155 8.9E-27 T 14-10-2018 IPR023214 HAD superfamily VEJY3_16156 eedf425a8d71019e47c0097499900d33 156 SUPERFAMILY SSF56784 4 143 4.45E-21 T 14-10-2018 IPR036412 HAD-like superfamily VEJY3_09570 990469b520b7f07bf28e76cd39231ea3 872 SUPERFAMILY SSF52540 202 306 1.73E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 251 438 7.3E-25 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 PIRSF PIRSF000538 343 481 9.0E-11 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 PIRSF PIRSF000538 2 302 2.8E-28 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 SUPERFAMILY SSF53067 248 454 6.69E-30 T 14-10-2018 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 229 1.5E-32 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 SUPERFAMILY SSF53067 2 239 1.77E-47 T 14-10-2018 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 Gene3D G3DSA:3.30.420.40 235 481 7.2E-87 T 14-10-2018 VEJY3_02915 cc03eef5039263004ae691e011a3f252 481 Gene3D G3DSA:3.30.420.40 1 234 6.9E-82 T 14-10-2018 VEJY3_03455 1c8381253f7e22ea74d3d06371bea939 193 Gene3D G3DSA:3.30.1370.110 46 181 6.5E-43 T 14-10-2018 VEJY3_03455 1c8381253f7e22ea74d3d06371bea939 193 SUPERFAMILY SSF160443 93 175 3.27E-14 T 14-10-2018 IPR036063 Smr domain superfamily VEJY3_03455 1c8381253f7e22ea74d3d06371bea939 193 SMART SM00463 92 175 1.6E-15 T 14-10-2018 IPR002625 Smr domain VEJY3_03455 1c8381253f7e22ea74d3d06371bea939 193 Pfam PF01713 Smr domain 95 175 2.8E-21 T 14-10-2018 IPR002625 Smr domain VEJY3_16246 304e33d9d941eba8666a44bd4e32a908 118 Gene3D G3DSA:3.30.1370.150 59 118 2.7E-30 T 14-10-2018 VEJY3_16246 304e33d9d941eba8666a44bd4e32a908 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 8.8E-31 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 VEJY3_03840 cc75c99921ec5e85ddd200c43bcd401b 114 PIRSF PIRSF000169 1 114 1.2E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VEJY3_03840 cc75c99921ec5e85ddd200c43bcd401b 114 Gene3D G3DSA:1.20.1300.10 1 114 6.2E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03840 cc75c99921ec5e85ddd200c43bcd401b 114 SUPERFAMILY SSF81343 4 113 1.06E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_03840 cc75c99921ec5e85ddd200c43bcd401b 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 3.8E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEJY3_09020 612601fe77c2b970f0d3557b2db59edc 87 SUPERFAMILY SSF48295 20 62 3.03E-5 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEJY3_09020 612601fe77c2b970f0d3557b2db59edc 87 Pfam PF13551 Winged helix-turn helix 12 74 7.8E-19 T 14-10-2018 VEJY3_02275 db3759b92595515181f772e44aa8c473 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 4.7E-95 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VEJY3_02275 db3759b92595515181f772e44aa8c473 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.879 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VEJY3_11040 e83b8b376976af7de9dc290c282a998a 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.1E-99 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VEJY3_11040 e83b8b376976af7de9dc290c282a998a 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.676 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VEJY3_15801 83afb67bdfa0812b84a118510ff7f8e0 69 SUPERFAMILY SSF46575 1 63 4.58E-5 T 14-10-2018 VEJY3_15801 83afb67bdfa0812b84a118510ff7f8e0 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.0E-34 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 VEJY3_12090 66b252d440bd1c490bf2789c1c2c7ca8 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 7.5E-56 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEJY3_12090 66b252d440bd1c490bf2789c1c2c7ca8 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-63 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEJY3_12090 66b252d440bd1c490bf2789c1c2c7ca8 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.893 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEJY3_13810 4aed0235f244ecc91c261c4a5287b69c 236 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_13810 4aed0235f244ecc91c261c4a5287b69c 236 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_03195 3ee53d1aa59bec69ba7d403b8ccdd9a8 207 Gene3D G3DSA:3.40.50.1820 13 191 2.3E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03195 3ee53d1aa59bec69ba7d403b8ccdd9a8 207 SUPERFAMILY SSF53474 8 202 1.8E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_03195 3ee53d1aa59bec69ba7d403b8ccdd9a8 207 Pfam PF01738 Dienelactone hydrolase family 77 187 6.0E-6 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEJY3_23476 4a041b6dd6df0bcad9bc1879e7a8d80b 115 Gene3D G3DSA:1.10.260.40 2 88 1.5E-9 T 14-10-2018 VEJY3_23476 4a041b6dd6df0bcad9bc1879e7a8d80b 115 SUPERFAMILY SSF47413 4 84 6.61E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09940 d4505c8f50d235b41486a90cc5145c82 194 SUPERFAMILY SSF55729 14 185 9.2E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_09940 d4505c8f50d235b41486a90cc5145c82 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 1.6E-18 T 14-10-2018 IPR000182 GNAT domain VEJY3_09940 d4505c8f50d235b41486a90cc5145c82 194 Gene3D G3DSA:3.40.630.30 14 191 8.6E-45 T 14-10-2018 VEJY3_03365 40b727a9f167c346d14e291f78e404dc 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 5.3E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VEJY3_03365 40b727a9f167c346d14e291f78e404dc 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.351 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VEJY3_03365 40b727a9f167c346d14e291f78e404dc 154 SUPERFAMILY SSF55486 4 150 3.91E-49 T 14-10-2018 VEJY3_03365 40b727a9f167c346d14e291f78e404dc 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VEJY3_03365 40b727a9f167c346d14e291f78e404dc 154 Gene3D G3DSA:3.40.390.30 1 154 1.2E-59 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VEJY3_11950 ff6de2e67a81c58e58c8a35cc609a17e 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.431 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 VEJY3_11950 ff6de2e67a81c58e58c8a35cc609a17e 154 Pfam PF00075 RNase H 3 141 2.1E-52 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VEJY3_11950 ff6de2e67a81c58e58c8a35cc609a17e 154 Gene3D G3DSA:3.30.420.10 1 154 4.0E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_11950 ff6de2e67a81c58e58c8a35cc609a17e 154 SUPERFAMILY SSF53098 3 143 2.66E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_18901 3552493f406626bba1cd4511fe625347 226 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 213 25.415 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VEJY3_18901 3552493f406626bba1cd4511fe625347 226 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 8.2E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_18901 3552493f406626bba1cd4511fe625347 226 PIRSF PIRSF006102 3 220 4.4E-71 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEJY3_14640 1fd7113fa75830239393307e80640297 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.1E-106 T 14-10-2018 VEJY3_14640 1fd7113fa75830239393307e80640297 295 SUPERFAMILY SSF53335 44 274 1.3E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_14640 1fd7113fa75830239393307e80640297 295 Gene3D G3DSA:3.40.50.150 102 294 2.2E-57 T 14-10-2018 VEJY3_14640 1fd7113fa75830239393307e80640297 295 PIRSF PIRSF000401 1 295 1.4E-100 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VEJY3_14640 1fd7113fa75830239393307e80640297 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.013 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VEJY3_12460 61ae3f4e8687b7ec217845a754fdfb73 364 Pfam PF14378 PAP2 superfamily 155 349 4.2E-25 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 VEJY3_18106 b3f1a7eb3013422f6873097235c3782a 292 SUPERFAMILY SSF51556 20 287 9.36E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_18106 b3f1a7eb3013422f6873097235c3782a 292 Gene3D G3DSA:3.20.20.140 2 291 1.3E-85 T 14-10-2018 VEJY3_18106 b3f1a7eb3013422f6873097235c3782a 292 Pfam PF04909 Amidohydrolase 24 287 6.5E-47 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEJY3_10455 96e1a832af818501b05b6ad2eb6d82c3 293 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.2E-23 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal VEJY3_10455 96e1a832af818501b05b6ad2eb6d82c3 293 SUPERFAMILY SSF54001 7 275 5.47E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEJY3_10455 96e1a832af818501b05b6ad2eb6d82c3 293 Pfam PF01841 Transglutaminase-like superfamily 134 246 8.2E-21 T 14-10-2018 IPR002931 Transglutaminase-like VEJY3_10455 96e1a832af818501b05b6ad2eb6d82c3 293 Gene3D G3DSA:3.10.620.30 93 287 2.5E-47 T 14-10-2018 VEJY3_10455 96e1a832af818501b05b6ad2eb6d82c3 293 SMART SM00460 178 248 1.4E-18 T 14-10-2018 IPR002931 Transglutaminase-like VEJY3_23106 7a674c73f1904ec9f53a07becb563172 466 Gene3D G3DSA:3.40.50.720 142 264 8.3E-13 T 14-10-2018 VEJY3_23106 7a674c73f1904ec9f53a07becb563172 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.0E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase VEJY3_23106 7a674c73f1904ec9f53a07becb563172 466 Pfam PF13727 CoA-binding domain 66 240 1.2E-35 T 14-10-2018 VEJY3_23106 7a674c73f1904ec9f53a07becb563172 466 SUPERFAMILY SSF51735 143 269 9.84E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_08305 657963746d2617c5b955f37d79c09d15 491 Pfam PF03553 Na+/H+ antiporter family 223 491 3.1E-29 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_03680 68a0f62d7041311d31ab7e76e4339683 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 8.5E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VEJY3_19081 cf9e0eb1ed5e195ae9b12b83d4a9a14c 540 Pfam PF08774 VRR-NUC domain 431 535 3.2E-23 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VEJY3_19081 cf9e0eb1ed5e195ae9b12b83d4a9a14c 540 SMART SM00990 429 536 6.2E-19 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VEJY3_19081 cf9e0eb1ed5e195ae9b12b83d4a9a14c 540 Gene3D G3DSA:3.40.1350.10 473 539 2.9E-9 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEJY3_09160 9c12c62ca3db00a5319efed6c031904b 442 Pfam PF02264 LamB porin 31 442 1.8E-46 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_09160 9c12c62ca3db00a5319efed6c031904b 442 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 75 412 2.0E-22 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEJY3_09160 9c12c62ca3db00a5319efed6c031904b 442 SUPERFAMILY SSF56935 30 442 2.29E-48 T 14-10-2018 VEJY3_09160 9c12c62ca3db00a5319efed6c031904b 442 Gene3D G3DSA:2.40.170.10 29 442 6.0E-57 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEJY3_02975 906e457a0a335891999f57a3c42dd13b 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.329 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE VEJY3_02975 906e457a0a335891999f57a3c42dd13b 119 Gene3D G3DSA:3.30.1450.10 34 117 5.3E-25 T 14-10-2018 IPR037873 BamE-like VEJY3_02975 906e457a0a335891999f57a3c42dd13b 119 Pfam PF04355 SmpA / OmlA family 35 103 9.0E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 4.2E-57 T 14-10-2018 VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 SUPERFAMILY SSF51735 4 250 5.67E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_18231 d9c8f4b528b0b2dcc66e4f9a0bfabbfe 250 Gene3D G3DSA:3.40.50.720 1 249 1.1E-78 T 14-10-2018 VEJY3_08270 df230df414cc4dcd9948803dcb1efb2e 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 1.0E-118 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VEJY3_08270 df230df414cc4dcd9948803dcb1efb2e 360 SUPERFAMILY SSF55909 3 360 1.5E-136 T 14-10-2018 VEJY3_08270 df230df414cc4dcd9948803dcb1efb2e 360 Gene3D G3DSA:3.75.10.10 2 360 1.2E-133 T 14-10-2018 VEJY3_08270 df230df414cc4dcd9948803dcb1efb2e 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.478 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VEJY3_20546 2af2d19f358f4415079c896dc9f5ff65 443 Pfam PF13520 Amino acid permease 7 419 2.2E-71 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_20546 2af2d19f358f4415079c896dc9f5ff65 443 PIRSF PIRSF006060 1 435 4.0E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEJY3_20546 2af2d19f358f4415079c896dc9f5ff65 443 Gene3D G3DSA:1.20.1740.10 2 441 2.2E-58 T 14-10-2018 VEJY3_16086 d926c9d583568a6318a9bb2d0080ff17 103 SUPERFAMILY SSF51182 2 102 3.82E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_16086 d926c9d583568a6318a9bb2d0080ff17 103 Gene3D G3DSA:2.60.120.10 13 103 2.0E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_16086 d926c9d583568a6318a9bb2d0080ff17 103 Pfam PF07883 Cupin domain 45 101 7.5E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VEJY3_02265 eff4b9f57c6a9816ea94242a59f8894c 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 8.0E-26 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 VEJY3_20011 1b2e421c9542be6c90472343a12771ac 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 1.2E-146 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 VEJY3_20011 1b2e421c9542be6c90472343a12771ac 544 SUPERFAMILY SSF52540 1 326 1.18E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_20011 1b2e421c9542be6c90472343a12771ac 544 Gene3D G3DSA:3.40.50.300 1 339 3.8E-16 T 14-10-2018 VEJY3_23686 666a219107de70aac99c71d2e443a5fa 125 PIRSF PIRSF031804 1 125 1.7E-40 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 VEJY3_23686 666a219107de70aac99c71d2e443a5fa 125 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.3E-14 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 VEJY3_23026 e25758da2f0f28037a744dc1693f5ef2 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 186 1.2E-26 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VEJY3_00785 a8fee9f2b240fb30d39ab6460921f824 866 Gene3D G3DSA:2.170.130.10 33 169 4.6E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEJY3_00785 a8fee9f2b240fb30d39ab6460921f824 866 Pfam PF00593 TonB dependent receptor 365 863 3.7E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEJY3_00785 a8fee9f2b240fb30d39ab6460921f824 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 1.7E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VEJY3_00785 a8fee9f2b240fb30d39ab6460921f824 866 SUPERFAMILY SSF56935 28 866 1.4E-91 T 14-10-2018 VEJY3_12020 ab65b1e3c15c3dad39163f48b504eb45 150 Pfam PF07977 FabA-like domain 17 141 7.7E-40 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_12020 ab65b1e3c15c3dad39163f48b504eb45 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.617 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_12020 ab65b1e3c15c3dad39163f48b504eb45 150 SUPERFAMILY SSF54637 7 146 1.28E-49 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_12020 ab65b1e3c15c3dad39163f48b504eb45 150 Gene3D G3DSA:3.10.129.10 2 150 2.1E-61 T 14-10-2018 VEJY3_13115 6c4538b88784a07bc6ab6b4267782dac 153 Pfam PF09335 SNARE associated Golgi protein 52 146 3.7E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Gene3D G3DSA:1.20.1330.10 189 327 4.1E-17 T 14-10-2018 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Gene3D G3DSA:1.10.8.410 328 375 2.6E-20 T 14-10-2018 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 1.4E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Gene3D G3DSA:1.20.58.1830 5 33 4.1E-71 T 14-10-2018 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 SUPERFAMILY SSF64518 1 375 1.96E-94 T 14-10-2018 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.7E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Gene3D G3DSA:1.20.1330.10 45 179 4.1E-71 T 14-10-2018 VEJY3_11630 988e31b2a40fcc39f8f03087d7bf74c2 376 Pfam PF07196 Flagellin hook IN motif 201 247 1.7E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEJY3_20646 8c61e93460a491fa1319c663d7ceb26c 181 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 97 179 1.9E-6 T 14-10-2018 IPR019275 Protein of unknown function DUF2301 VEJY3_06510 f5b59056e82eedc90d29a0d15febc837 220 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 5.0E-33 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 VEJY3_06510 f5b59056e82eedc90d29a0d15febc837 220 PIRSF PIRSF028063 1 220 2.9E-135 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 Gene3D G3DSA:1.25.40.10 138 313 1.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 SUPERFAMILY SSF48452 172 316 8.35E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 Gene3D G3DSA:3.40.50.2300 4 134 3.6E-22 T 14-10-2018 VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 Pfam PF14559 Tetratricopeptide repeat 176 240 2.2E-8 T 14-10-2018 VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 PIRSF PIRSF011521 1 542 3.2E-186 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 Pfam PF00072 Response regulator receiver domain 10 122 2.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 SUPERFAMILY SSF52172 6 144 1.39E-22 T 14-10-2018 IPR011006 CheY-like superfamily VEJY3_19166 f0a96402841b5d8415476a3bcd7a404a 542 SMART SM00448 8 124 1.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEJY3_01775 008e595cbabf585e57e8920a7ce6ae2c 584 SUPERFAMILY SSF55729 313 453 5.24E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_01775 008e595cbabf585e57e8920a7ce6ae2c 584 Gene3D G3DSA:3.40.630.30 314 458 1.1E-6 T 14-10-2018 VEJY3_01775 008e595cbabf585e57e8920a7ce6ae2c 584 SMART SM00563 75 199 6.4E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_01775 008e595cbabf585e57e8920a7ce6ae2c 584 SUPERFAMILY SSF69593 45 248 2.62E-9 T 14-10-2018 VEJY3_01775 008e595cbabf585e57e8920a7ce6ae2c 584 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 4.7E-22 T 14-10-2018 VEJY3_11335 da052974a48db75ebb31d4621b258dec 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 3.4E-73 T 14-10-2018 IPR007411 Elongation factor P hydroxylase VEJY3_21931 42beef5639af8debe8181aa5ceda5422 339 Pfam PF02628 Cytochrome oxidase assembly protein 6 315 7.2E-80 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VEJY3_00505 a1707f75ce586a937c43ccdf58e902e3 212 SUPERFAMILY SSF53335 47 199 1.93E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_00505 a1707f75ce586a937c43ccdf58e902e3 212 Gene3D G3DSA:3.40.50.150 43 203 1.9E-12 T 14-10-2018 VEJY3_00505 a1707f75ce586a937c43ccdf58e902e3 212 Pfam PF13489 Methyltransferase domain 62 192 4.5E-18 T 14-10-2018 VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 9.8E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 PIRSF PIRSF001413 1 395 2.4E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 Gene3D G3DSA:3.40.50.1100 53 383 1.6E-183 T 14-10-2018 VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.864 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 SUPERFAMILY SSF53686 5 387 3.14E-141 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_10275 265ac3c2f41b02fc839a5d6553004b82 396 Gene3D G3DSA:3.40.50.1100 9 204 1.6E-183 T 14-10-2018 VEJY3_15470 2d0e56ec49ffc33a7258944cfa8e7b37 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 8.1E-37 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEJY3_15470 2d0e56ec49ffc33a7258944cfa8e7b37 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.668 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEJY3_15470 2d0e56ec49ffc33a7258944cfa8e7b37 156 SUPERFAMILY SSF81573 63 121 6.15E-15 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VEJY3_15470 2d0e56ec49ffc33a7258944cfa8e7b37 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 9.1E-61 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VEJY3_15470 2d0e56ec49ffc33a7258944cfa8e7b37 156 Gene3D G3DSA:1.20.5.620 62 122 2.5E-23 T 14-10-2018 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEJY3_14720 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_07170 a9019da713b3d52f3a09d1727a9e6775 232 Gene3D G3DSA:1.10.3720.10 2 228 1.9E-26 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07170 a9019da713b3d52f3a09d1727a9e6775 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 3.9E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_07170 a9019da713b3d52f3a09d1727a9e6775 232 SUPERFAMILY SSF161098 15 222 1.14E-29 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 SMART SM00028 69 102 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 SMART SM00028 35 68 430.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 SMART SM00028 182 215 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 SMART SM00028 216 249 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 SUPERFAMILY SSF81901 39 274 9.68E-21 T 14-10-2018 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 37.029 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 Pfam PF14559 Tetratricopeptide repeat 195 248 4.0E-6 T 14-10-2018 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 Gene3D G3DSA:1.25.40.10 21 357 1.5E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_10545 5e81a6d9bfe92a831d604bb74ce2ef43 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.02 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEJY3_09525 27b9b58682010c8d24b4ccbb7df77c36 84 SUPERFAMILY SSF47413 5 72 1.89E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEJY3_09525 27b9b58682010c8d24b4ccbb7df77c36 84 Gene3D G3DSA:1.10.260.40 1 84 3.1E-14 T 14-10-2018 VEJY3_09525 27b9b58682010c8d24b4ccbb7df77c36 84 Pfam PF01381 Helix-turn-helix 13 64 8.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_09525 27b9b58682010c8d24b4ccbb7df77c36 84 SMART SM00530 12 67 4.8E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEJY3_22591 8510a4880d874eae3b9ddb2e34305e60 292 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 83 206 3.2E-9 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VEJY3_11865 ca38332c5e966f3dcd2458505095e55e 357 Pfam PF01594 AI-2E family transporter 20 345 1.0E-75 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VEJY3_12570 93821adbbf304ebb30f5c0f82d905937 782 Pfam PF07238 PilZ domain 470 552 4.0E-11 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VEJY3_12570 93821adbbf304ebb30f5c0f82d905937 782 Pfam PF07238 PilZ domain 145 227 2.3E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VEJY3_12570 93821adbbf304ebb30f5c0f82d905937 782 SUPERFAMILY SSF141371 464 554 5.49E-7 T 14-10-2018 VEJY3_12570 93821adbbf304ebb30f5c0f82d905937 782 Gene3D G3DSA:2.40.10.220 466 584 2.3E-5 T 14-10-2018 VEJY3_12570 93821adbbf304ebb30f5c0f82d905937 782 SUPERFAMILY SSF141371 144 200 8.83E-5 T 14-10-2018 VEJY3_12905 39dc0f6a73c29d2615afa6d19b45f290 377 PIRSF PIRSF006078 1 376 1.2E-145 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_12905 39dc0f6a73c29d2615afa6d19b45f290 377 SUPERFAMILY SSF110738 1 375 4.84E-147 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VEJY3_12905 39dc0f6a73c29d2615afa6d19b45f290 377 Pfam PF02595 Glycerate kinase family 3 373 3.5E-155 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEJY3_12905 39dc0f6a73c29d2615afa6d19b45f290 377 Gene3D G3DSA:3.40.50.10350 2 361 8.4E-146 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VEJY3_12905 39dc0f6a73c29d2615afa6d19b45f290 377 Gene3D G3DSA:3.90.1510.10 42 276 8.4E-146 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 SUPERFAMILY SSF52833 38 129 3.66E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 3.5E-6 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 Gene3D G3DSA:3.40.30.10 17 254 2.6E-110 T 14-10-2018 VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 Gene3D G3DSA:1.20.1050.10 132 248 2.6E-110 T 14-10-2018 VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 SUPERFAMILY SSF47616 116 258 6.82E-32 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEJY3_17326 c801b8407c3e939e6242c62d3b0f72a2 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 4.3E-8 T 14-10-2018 VEJY3_18531 4c44cbaa4ae0885716d33a1ffa627958 260 SUPERFAMILY SSF52096 4 258 7.68E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_18531 4c44cbaa4ae0885716d33a1ffa627958 260 Gene3D G3DSA:3.90.226.10 2 200 2.2E-61 T 14-10-2018 VEJY3_18531 4c44cbaa4ae0885716d33a1ffa627958 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 2.7E-48 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_18531 4c44cbaa4ae0885716d33a1ffa627958 260 Gene3D G3DSA:1.10.12.10 201 260 1.0E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEJY3_00400 951ed9d710f292bdad97ac76d23deef4 129 Pfam PF04304 Protein of unknown function (DUF454) 4 120 1.0E-30 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VEJY3_00400 951ed9d710f292bdad97ac76d23deef4 129 PIRSF PIRSF016789 3 125 8.3E-29 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VEJY3_09040 8520be8497bb61d46c96105135495300 362 Gene3D G3DSA:3.20.20.70 1 362 8.0E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_09040 8520be8497bb61d46c96105135495300 362 SUPERFAMILY SSF51395 2 361 1.95E-107 T 14-10-2018 VEJY3_09040 8520be8497bb61d46c96105135495300 362 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 335 3.1E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_09320 399f20e4a096faa3ff352f2523ed0375 531 Gene3D G3DSA:1.20.1730.10 23 530 7.5E-118 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_09320 399f20e4a096faa3ff352f2523ed0375 531 Pfam PF00474 Sodium:solute symporter family 35 442 2.1E-43 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 SMART SM00670 7 141 2.8E-9 T 14-10-2018 IPR002716 PIN domain VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 Gene3D G3DSA:3.40.50.300 245 456 1.3E-65 T 14-10-2018 VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 Pfam PF02562 PhoH-like protein 248 452 4.8E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 Pfam PF13638 PIN domain 9 150 2.9E-35 T 14-10-2018 IPR002716 PIN domain VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 Gene3D G3DSA:3.40.50.1010 3 155 9.1E-28 T 14-10-2018 VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 SUPERFAMILY SSF52540 247 437 5.64E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_13755 f79fc5ddfe9e020e9f590252e1e5d2f9 458 SUPERFAMILY SSF88723 7 155 3.34E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily VEJY3_01575 c07e317dac9e56549fea0cf66979a1ab 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 4.8E-70 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 VEJY3_01575 c07e317dac9e56549fea0cf66979a1ab 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 407 1.8E-50 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_21646 97f83c9789d0c47d015cb6b948016cce 134 SUPERFAMILY SSF51344 6 80 9.16E-13 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21646 97f83c9789d0c47d015cb6b948016cce 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 18 80 1.5E-12 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21646 97f83c9789d0c47d015cb6b948016cce 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 28 78 2.0E-5 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_21646 97f83c9789d0c47d015cb6b948016cce 134 Gene3D G3DSA:2.60.15.10 4 127 7.1E-14 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEJY3_22926 9dba697dcff7d3f1ff09ffdad32fdbb4 108 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 3.6E-30 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 VEJY3_16566 875113c5de61960b988dca980c256d49 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.3E-25 T 14-10-2018 VEJY3_16566 875113c5de61960b988dca980c256d49 336 PIRSF PIRSF002825 2 329 2.9E-77 T 14-10-2018 IPR026045 Ferric binding protein VEJY3_16566 875113c5de61960b988dca980c256d49 336 Gene3D G3DSA:3.40.190.10 133 311 1.4E-77 T 14-10-2018 VEJY3_16566 875113c5de61960b988dca980c256d49 336 Gene3D G3DSA:3.40.190.10 30 297 1.4E-77 T 14-10-2018 VEJY3_16566 875113c5de61960b988dca980c256d49 336 SUPERFAMILY SSF53850 27 326 3.36E-62 T 14-10-2018 VEJY3_03030 db0033741d68417d310d144e75f68f26 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_03030 db0033741d68417d310d144e75f68f26 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.9E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.9E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.9E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 8.9E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 SUPERFAMILY SSF46785 9 96 1.69E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.2E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 Gene3D G3DSA:1.10.10.10 1 98 3.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_02390 39adf33151d63acdb1011cd6ebbbab82 98 SMART SM00418 15 93 2.5E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 Gene3D G3DSA:2.40.50.100 57 219 1.7E-90 T 14-10-2018 VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 261 1.3E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 Gene3D G3DSA:1.10.287.470 91 182 1.7E-90 T 14-10-2018 VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 Gene3D G3DSA:2.40.30.170 46 309 1.7E-90 T 14-10-2018 VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 SUPERFAMILY SSF111369 50 305 4.84E-24 T 14-10-2018 VEJY3_16521 bc7e0ffa659a2d428b73b7566b5dae11 390 Gene3D G3DSA:2.40.420.20 41 369 1.7E-90 T 14-10-2018 VEJY3_01605 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01605 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEJY3_01605 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01605 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_24216 cfeacd23530b9b993046fd3638969317 829 Pfam PF02687 FtsX-like permease family 728 818 1.9E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_12105 7d444fddc913ce7faf6195a5468e6b71 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 8.9E-133 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 VEJY3_11885 962f5c988f63fb329a5f099c2304c0a5 189 SUPERFAMILY SSF52218 4 187 3.41E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_11885 962f5c988f63fb329a5f099c2304c0a5 189 Pfam PF03358 NADPH-dependent FMN reductase 13 135 4.4E-12 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEJY3_11885 962f5c988f63fb329a5f099c2304c0a5 189 Gene3D G3DSA:3.40.50.360 1 189 2.5E-61 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_11885 962f5c988f63fb329a5f099c2304c0a5 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEJY3_06445 49ba33e72942a6dd5adb90151e1e6617 262 SUPERFAMILY SSF56112 2 222 3.64E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_06445 49ba33e72942a6dd5adb90151e1e6617 262 Pfam PF01636 Phosphotransferase enzyme family 116 163 3.1E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VEJY3_06445 49ba33e72942a6dd5adb90151e1e6617 262 Gene3D G3DSA:3.90.1200.10 61 201 1.6E-10 T 14-10-2018 VEJY3_12030 b3dadbfaff15ab1ef1b7c603b61bddc3 169 Gene3D G3DSA:3.30.910.20 25 169 6.8E-35 T 14-10-2018 IPR024930 Skp domain superfamily VEJY3_12030 b3dadbfaff15ab1ef1b7c603b61bddc3 169 SUPERFAMILY SSF111384 26 169 7.32E-31 T 14-10-2018 VEJY3_12030 b3dadbfaff15ab1ef1b7c603b61bddc3 169 PIRSF PIRSF002094 1 169 2.9E-42 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEJY3_12030 b3dadbfaff15ab1ef1b7c603b61bddc3 169 SMART SM00935 15 169 1.8E-42 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEJY3_12030 b3dadbfaff15ab1ef1b7c603b61bddc3 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 1.2E-26 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEJY3_02970 1af5bd4d27e5c4087ecb7e2374c35eca 117 Gene3D G3DSA:3.10.20.280 2 92 1.1E-32 T 14-10-2018 IPR037021 RnfH superfamily VEJY3_02970 1af5bd4d27e5c4087ecb7e2374c35eca 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.458 T 14-10-2018 IPR005346 RnfH protein VEJY3_02970 1af5bd4d27e5c4087ecb7e2374c35eca 117 SUPERFAMILY SSF54285 6 82 3.34E-25 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEJY3_02970 1af5bd4d27e5c4087ecb7e2374c35eca 117 Pfam PF03658 RnfH family Ubiquitin 8 90 3.7E-33 T 14-10-2018 IPR005346 RnfH protein VEJY3_05320 1d0a36e01c64e2b3dfd50a9c9e95898d 550 SUPERFAMILY SSF100950 35 277 2.68E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_05320 1d0a36e01c64e2b3dfd50a9c9e95898d 550 Gene3D G3DSA:3.40.1080.10 31 232 5.2E-19 T 14-10-2018 VEJY3_05320 1d0a36e01c64e2b3dfd50a9c9e95898d 550 SUPERFAMILY SSF100950 229 487 4.57E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VEJY3_05320 1d0a36e01c64e2b3dfd50a9c9e95898d 550 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 6 550 7.5E-294 T 14-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 VEJY3_01995 7a6a18ca7a76b6e66fd9d68c5b6e4241 245 SUPERFAMILY SSF46626 17 208 7.88E-49 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_01995 7a6a18ca7a76b6e66fd9d68c5b6e4241 245 Pfam PF02167 Cytochrome C1 family 33 244 1.1E-15 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VEJY3_01995 7a6a18ca7a76b6e66fd9d68c5b6e4241 245 Gene3D G3DSA:1.10.760.10 26 210 1.8E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 SUPERFAMILY SSF56112 6 328 1.04E-89 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 Gene3D G3DSA:1.20.1270.170 149 307 8.7E-124 T 14-10-2018 VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 Gene3D G3DSA:3.30.200.70 13 108 8.7E-124 T 14-10-2018 VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 8.3E-41 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.658 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VEJY3_15375 baac563815fd4ee04083dd2f9d6e7c65 328 Gene3D G3DSA:1.10.510.10 60 258 8.7E-124 T 14-10-2018 VEJY3_06440 ed132d673f337a344f874c3b189b813b 85 Pfam PF04973 Nicotinamide mononucleotide transporter 9 78 4.1E-6 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VEJY3_13970 3f7199f5e3e5970d7b1b2b71cf834438 152 Gene3D G3DSA:3.30.1490.190 90 150 8.6E-17 T 14-10-2018 VEJY3_13970 3f7199f5e3e5970d7b1b2b71cf834438 152 SUPERFAMILY SSF46785 11 144 1.28E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_13970 3f7199f5e3e5970d7b1b2b71cf834438 152 Gene3D G3DSA:1.10.10.10 3 89 3.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13970 3f7199f5e3e5970d7b1b2b71cf834438 152 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VEJY3_18011 a38d135147eab60708cd73233ccafbbe 313 Gene3D G3DSA:3.40.190.10 27 307 3.9E-84 T 14-10-2018 VEJY3_18011 a38d135147eab60708cd73233ccafbbe 313 Gene3D G3DSA:3.40.190.10 109 245 3.9E-84 T 14-10-2018 VEJY3_18011 a38d135147eab60708cd73233ccafbbe 313 Pfam PF16868 NMT1-like family 27 307 7.4E-75 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEJY3_18011 a38d135147eab60708cd73233ccafbbe 313 SUPERFAMILY SSF53850 23 307 6.35E-64 T 14-10-2018 VEJY3_04505 bb44a21dc8c72eb052e3ce12c5e045d7 243 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 242 2.5E-58 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VEJY3_01330 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01330 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEJY3_01330 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEJY3_01330 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEJY3_01330 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEJY3_01330 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_17561 355a89cde5bb47ce798e1ab7d838a093 308 SUPERFAMILY SSF103481 203 289 2.22E-8 T 14-10-2018 VEJY3_17561 355a89cde5bb47ce798e1ab7d838a093 308 Pfam PF00892 EamA-like transporter family 151 289 4.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_17561 355a89cde5bb47ce798e1ab7d838a093 308 Pfam PF00892 EamA-like transporter family 3 136 1.5E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_17561 355a89cde5bb47ce798e1ab7d838a093 308 SUPERFAMILY SSF103481 39 139 1.57E-11 T 14-10-2018 VEJY3_08100 0671d65491d5b628993fc107234eb053 821 Pfam PF13148 Protein of unknown function (DUF3987) 478 704 4.6E-10 T 14-10-2018 IPR025048 Protein of unknown function DUF3987) VEJY3_14825 7dbf9752c644480f458c1161d323d430 108 SUPERFAMILY SSF55729 4 81 6.8E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_14825 7dbf9752c644480f458c1161d323d430 108 Gene3D G3DSA:3.40.630.30 1 101 1.9E-10 T 14-10-2018 VEJY3_14825 7dbf9752c644480f458c1161d323d430 108 Pfam PF13673 Acetyltransferase (GNAT) domain 3 81 8.6E-8 T 14-10-2018 IPR000182 GNAT domain VEJY3_02150 cec9a55e9db4bccf16ddb2f7c6d5f95d 203 Pfam PF03458 UPF0126 domain 92 162 9.2E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VEJY3_02150 cec9a55e9db4bccf16ddb2f7c6d5f95d 203 Pfam PF03458 UPF0126 domain 5 78 4.9E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VEJY3_08785 5e4448d6730aa3fb6954d55ff54a0b2c 119 SUPERFAMILY SSF54909 22 99 3.18E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VEJY3_08785 5e4448d6730aa3fb6954d55ff54a0b2c 119 Gene3D G3DSA:3.30.70.100 24 118 1.3E-9 T 14-10-2018 VEJY3_08785 5e4448d6730aa3fb6954d55ff54a0b2c 119 Pfam PF03992 Antibiotic biosynthesis monooxygenase 22 90 1.5E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEJY3_23721 73034b348ebb5cd16eb04d9bd07850fe 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 3.8E-98 T 14-10-2018 IPR007163 Protein of unknown function DUF368 VEJY3_09410 995b861c0017ffd26fbe8e348903cf5e 128 SUPERFAMILY SSF53098 4 112 2.15E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VEJY3_09410 995b861c0017ffd26fbe8e348903cf5e 128 Gene3D G3DSA:3.30.420.10 1 95 2.2E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEJY3_09410 995b861c0017ffd26fbe8e348903cf5e 128 Pfam PF13683 Integrase core domain 37 103 3.5E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_13315 16ace950187874dcc7583fd7ba22fc25 148 Pfam PF04073 Aminoacyl-tRNA editing domain 19 138 1.0E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_13315 16ace950187874dcc7583fd7ba22fc25 148 Gene3D G3DSA:3.90.960.10 1 148 1.2E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_13315 16ace950187874dcc7583fd7ba22fc25 148 SUPERFAMILY SSF55826 1 147 1.57E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEJY3_18841 27e77f1e57a11c5046d38740828df815 135 Gene3D G3DSA:1.10.720.30 19 78 9.1E-26 T 14-10-2018 IPR036361 SAP domain superfamily VEJY3_18841 27e77f1e57a11c5046d38740828df815 135 Pfam PF09905 DNA-binding protein VF530 11 73 2.6E-30 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VEJY3_23731 d65feb4a59f394c9f0d28abce5982d29 205 SUPERFAMILY SSF52833 44 197 1.09E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_23731 d65feb4a59f394c9f0d28abce5982d29 205 Pfam PF02630 SCO1/SenC 15 178 7.1E-30 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEJY3_23731 d65feb4a59f394c9f0d28abce5982d29 205 Gene3D G3DSA:3.40.30.10 24 199 7.3E-36 T 14-10-2018 VEJY3_12520 6035e73aea49ce7b444161620e737920 435 Gene3D G3DSA:3.40.50.300 134 350 3.7E-10 T 14-10-2018 VEJY3_12520 6035e73aea49ce7b444161620e737920 435 SUPERFAMILY SSF52540 145 388 1.1E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_12520 6035e73aea49ce7b444161620e737920 435 SMART SM00382 164 355 0.0015 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_07210 bfbd63fafcda853c8619279a31edcb25 204 Pfam PF11748 Protein of unknown function (DUF3306) 7 121 7.8E-25 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 VEJY3_13590 64ebc8820aac623899d9bc59d2f9eace 164 SUPERFAMILY SSF55729 7 164 7.38E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_13590 64ebc8820aac623899d9bc59d2f9eace 164 Gene3D G3DSA:3.40.630.30 5 164 2.9E-26 T 14-10-2018 VEJY3_13590 64ebc8820aac623899d9bc59d2f9eace 164 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 5.7E-15 T 14-10-2018 IPR000182 GNAT domain VEJY3_04030 b574c3698df98e26576d5266a10d71fe 262 Pfam PF01844 HNH endonuclease 188 244 1.2E-9 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VEJY3_04030 b574c3698df98e26576d5266a10d71fe 262 SUPERFAMILY SSF88697 4 116 1.89E-6 T 14-10-2018 IPR015947 PUA-like superfamily VEJY3_22386 a370b1da7ff2b57d106df988ca02cb00 171 Gene3D G3DSA:3.40.630.30 1 166 6.4E-39 T 14-10-2018 VEJY3_22386 a370b1da7ff2b57d106df988ca02cb00 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 3.0E-27 T 14-10-2018 IPR000182 GNAT domain VEJY3_22386 a370b1da7ff2b57d106df988ca02cb00 171 SUPERFAMILY SSF55729 4 156 4.81E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_08200 4797cf0436dcf502bc1a81aca1c3693d 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 47.15 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEJY3_08200 4797cf0436dcf502bc1a81aca1c3693d 316 PIRSF PIRSF026649 4 307 5.3E-91 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_08200 4797cf0436dcf502bc1a81aca1c3693d 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 298 1.1E-86 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 SMART SM00062 39 262 2.6E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 SUPERFAMILY SSF53850 7 259 3.75E-58 T 14-10-2018 VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 1.1E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 Gene3D G3DSA:3.40.190.10 125 216 8.6E-62 T 14-10-2018 VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 Gene3D G3DSA:3.40.190.10 31 249 8.6E-62 T 14-10-2018 VEJY3_20136 65e52e36a7c81c4cf27cc4e9fddac010 272 SMART SM00079 39 261 0.0037 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEJY3_22196 b54ee3e6aa99d4aefc7959070ace70dc 385 Pfam PF13088 BNR repeat-like domain 46 368 2.0E-67 T 14-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 VEJY3_22196 b54ee3e6aa99d4aefc7959070ace70dc 385 SUPERFAMILY SSF50939 30 383 2.8E-60 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 VEJY3_22196 b54ee3e6aa99d4aefc7959070ace70dc 385 Gene3D G3DSA:2.120.10.10 26 295 1.6E-35 T 14-10-2018 VEJY3_19191 5c1189e7b430e920d67bd44b5e963020 151 SUPERFAMILY SSF55811 9 137 1.08E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_19191 5c1189e7b430e920d67bd44b5e963020 151 Gene3D G3DSA:3.90.79.10 6 135 1.3E-24 T 14-10-2018 VEJY3_19191 5c1189e7b430e920d67bd44b5e963020 151 Pfam PF00293 NUDIX domain 11 122 2.9E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 Gene3D G3DSA:2.30.330.10 44 136 3.8E-34 T 14-10-2018 IPR036429 SpoA-like superfamily VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 14-10-2018 IPR036429 SpoA-like superfamily VEJY3_11540 48378f4c0a20ed3f1a6e56adb8052a7c 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEJY3_14455 87b356fec4980c7ba31b224732f5def2 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.086 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VEJY3_14455 87b356fec4980c7ba31b224732f5def2 323 Gene3D G3DSA:3.30.930.10 1 322 7.7E-109 T 14-10-2018 VEJY3_14455 87b356fec4980c7ba31b224732f5def2 323 SUPERFAMILY SSF55681 11 320 5.36E-81 T 14-10-2018 VEJY3_14455 87b356fec4980c7ba31b224732f5def2 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 319 3.3E-43 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEJY3_14455 87b356fec4980c7ba31b224732f5def2 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 1.3E-127 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VEJY3_17371 fbf9492d846330f05d709ffd46571ce4 304 SUPERFAMILY SSF161111 19 233 1.7E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_17371 fbf9492d846330f05d709ffd46571ce4 304 Gene3D G3DSA:1.20.1510.10 23 232 2.8E-34 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEJY3_17371 fbf9492d846330f05d709ffd46571ce4 304 Pfam PF01545 Cation efflux family 27 232 1.1E-37 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEJY3_21176 54faf142cfa6d1d009be4a08d12301b0 158 PIRSF PIRSF019239 1 158 6.7E-42 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VEJY3_21176 54faf142cfa6d1d009be4a08d12301b0 158 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 7.0E-41 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VEJY3_22946 7352350ae0b6ec777e182e4a5121fc3b 403 Pfam PF06527 TniQ 5 156 5.0E-14 T 14-10-2018 IPR009492 TniQ VEJY3_23571 5289dc9f8d520731e734fb22af3d8d0a 250 SMART SM00481 5 79 7.5E-8 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEJY3_23571 5289dc9f8d520731e734fb22af3d8d0a 250 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.689 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VEJY3_23571 5289dc9f8d520731e734fb22af3d8d0a 250 Gene3D G3DSA:3.20.20.140 2 247 1.1E-63 T 14-10-2018 VEJY3_23571 5289dc9f8d520731e734fb22af3d8d0a 250 SUPERFAMILY SSF89550 4 244 9.16E-62 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEJY3_15405 8bf078eb60d45c87af89ec551eeb6010 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 14-10-2018 VEJY3_15405 8bf078eb60d45c87af89ec551eeb6010 94 Gene3D G3DSA:3.30.70.260 1 88 1.3E-12 T 14-10-2018 VEJY3_15405 8bf078eb60d45c87af89ec551eeb6010 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 14-10-2018 VEJY3_15405 8bf078eb60d45c87af89ec551eeb6010 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 14-10-2018 VEJY3_10170 01d796d21e7a71cbebc724fef7b7015b 305 Pfam PF13084 Domain of unknown function (DUF3943) 142 251 1.1E-37 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 VEJY3_02550 b825074bf942346e6e2ab8c3327d5092 275 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_02550 b825074bf942346e6e2ab8c3327d5092 275 SMART SM00382 33 215 6.2E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_02550 b825074bf942346e6e2ab8c3327d5092 275 Gene3D G3DSA:3.40.50.300 3 264 2.7E-64 T 14-10-2018 VEJY3_02550 b825074bf942346e6e2ab8c3327d5092 275 Pfam PF00005 ABC transporter 24 164 1.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_02550 b825074bf942346e6e2ab8c3327d5092 275 SUPERFAMILY SSF52540 5 234 6.69E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.1E-10 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 Gene3D G3DSA:1.20.1640.10 105 300 3.0E-12 T 14-10-2018 VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 Pfam PF02355 Protein export membrane protein 113 292 1.5E-70 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 SUPERFAMILY SSF82866 74 293 7.98E-41 T 14-10-2018 VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.956 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_02705 fb06bce26b9d2bf8b1df8cd1cec0e70f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEJY3_00480 9cb0e8f7a51eb621c17ec7a02aca62ac 144 Pfam PF00583 Acetyltransferase (GNAT) family 25 116 1.7E-8 T 14-10-2018 IPR000182 GNAT domain VEJY3_00480 9cb0e8f7a51eb621c17ec7a02aca62ac 144 SUPERFAMILY SSF55729 1 128 2.36E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_00480 9cb0e8f7a51eb621c17ec7a02aca62ac 144 Gene3D G3DSA:3.40.630.30 2 143 1.3E-17 T 14-10-2018 VEJY3_14495 c0c5fddd41c032f4119802fbf89d657e 164 Pfam PF02308 MgtC family 19 141 1.9E-28 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_14495 c0c5fddd41c032f4119802fbf89d657e 164 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_14495 c0c5fddd41c032f4119802fbf89d657e 164 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_14495 c0c5fddd41c032f4119802fbf89d657e 164 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_14495 c0c5fddd41c032f4119802fbf89d657e 164 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEJY3_11395 114f2f2961a3d918bd9cca65f587f6c9 420 SUPERFAMILY SSF56935 27 420 1.1E-88 T 14-10-2018 VEJY3_11395 114f2f2961a3d918bd9cca65f587f6c9 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 420 6.8E-118 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_11395 114f2f2961a3d918bd9cca65f587f6c9 420 Gene3D G3DSA:2.40.160.60 27 420 2.4E-109 T 14-10-2018 VEJY3_09355 a4155121d6aa0ac923ccb30780669a96 148 Gene3D G3DSA:2.80.10.50 4 148 1.9E-10 T 14-10-2018 VEJY3_09355 a4155121d6aa0ac923ccb30780669a96 148 Pfam PF00652 Ricin-type beta-trefoil lectin domain 64 147 3.3E-9 T 14-10-2018 IPR000772 Ricin B, lectin domain VEJY3_09355 a4155121d6aa0ac923ccb30780669a96 148 SUPERFAMILY SSF50370 11 146 1.57E-11 T 14-10-2018 IPR035992 Ricin B-like lectins VEJY3_03800 3ef3128db6b17e3e51d02feb5ab367d0 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.4E-19 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 SUPERFAMILY SSF55486 1 493 6.59E-112 T 14-10-2018 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 3.7E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 492 3.6E-92 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 PIRSF PIRSF006615 1 493 1.7E-192 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEJY3_08175 75548ba717f2a630fb869cf66ac687c9 493 Gene3D G3DSA:1.10.1370.30 1 493 2.4E-192 T 14-10-2018 VEJY3_11855 9b9b1632856dbf5e8dc0e6c84ea3af09 406 SUPERFAMILY SSF110849 106 195 4.97E-6 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEJY3_17366 bb2b15a5fe9e36f051fdd747c40fbf80 282 Pfam PF01734 Patatin-like phospholipase 9 175 5.5E-18 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEJY3_17366 bb2b15a5fe9e36f051fdd747c40fbf80 282 Gene3D G3DSA:3.40.1090.10 2 89 1.1E-9 T 14-10-2018 VEJY3_17366 bb2b15a5fe9e36f051fdd747c40fbf80 282 Gene3D G3DSA:3.40.1090.10 90 233 1.4E-9 T 14-10-2018 VEJY3_17366 bb2b15a5fe9e36f051fdd747c40fbf80 282 SUPERFAMILY SSF52151 6 279 2.88E-37 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_21946 8f5195a19ecf80b9273f06e85f2ee7b2 78 Pfam PF11137 Protein of unknown function (DUF2909) 7 71 3.0E-22 T 14-10-2018 IPR021313 Protein of unknown function DUF2909 VEJY3_13190 14ec55da5cefd77b2be8f6a876d3ba02 258 Gene3D G3DSA:3.40.1210.10 2 258 2.4E-95 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEJY3_13190 14ec55da5cefd77b2be8f6a876d3ba02 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.784 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEJY3_13190 14ec55da5cefd77b2be8f6a876d3ba02 258 SUPERFAMILY SSF64167 11 256 4.19E-85 T 14-10-2018 VEJY3_13190 14ec55da5cefd77b2be8f6a876d3ba02 258 Pfam PF01975 Survival protein SurE 13 191 7.4E-60 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.6E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.6E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.6E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.6E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 Pfam PF00425 chorismate binding enzyme 246 506 4.9E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 SUPERFAMILY SSF56322 13 516 2.35E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 Gene3D G3DSA:3.60.120.10 8 520 3.9E-186 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 PIRSF PIRSF001373 3 520 8.0E-260 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 3.6E-225 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_10255 3e4701a23fe5d6164206936fdf7d9e9d 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 1.1E-13 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEJY3_01475 4e7e6e0df3f8c2f8e6f7daae96e3cccb 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 2.2E-84 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VEJY3_03075 642dbe75fa93afcff7c0b45bbda4f3b1 355 PIRSF PIRSF039012 4 324 3.4E-92 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_03075 642dbe75fa93afcff7c0b45bbda4f3b1 355 SUPERFAMILY SSF53187 22 316 5.29E-76 T 14-10-2018 VEJY3_03075 642dbe75fa93afcff7c0b45bbda4f3b1 355 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 51 316 1.6E-70 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEJY3_03075 642dbe75fa93afcff7c0b45bbda4f3b1 355 Gene3D G3DSA:3.40.630.10 15 320 5.5E-93 T 14-10-2018 VEJY3_17756 c9fd575472e1236b7b3309ef90d396ee 249 SUPERFAMILY SSF69572 4 249 1.31E-85 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEJY3_17756 c9fd575472e1236b7b3309ef90d396ee 249 Gene3D G3DSA:3.40.50.720 4 249 1.6E-86 T 14-10-2018 VEJY3_17756 c9fd575472e1236b7b3309ef90d396ee 249 Pfam PF00899 ThiF family 12 245 5.4E-64 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEJY3_24106 8445c46362b1e82b101d541d7a72e8cd 307 Gene3D G3DSA:3.40.50.1980 27 137 5.8E-30 T 14-10-2018 VEJY3_24106 8445c46362b1e82b101d541d7a72e8cd 307 SUPERFAMILY SSF53807 28 291 9.81E-59 T 14-10-2018 VEJY3_24106 8445c46362b1e82b101d541d7a72e8cd 307 Gene3D G3DSA:3.40.50.1980 139 307 9.6E-46 T 14-10-2018 VEJY3_24106 8445c46362b1e82b101d541d7a72e8cd 307 Pfam PF01497 Periplasmic binding protein 52 282 4.2E-27 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 Gene3D G3DSA:3.40.190.10 163 263 4.1E-63 T 14-10-2018 VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 SUPERFAMILY SSF46785 6 112 1.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 SUPERFAMILY SSF53850 89 296 3.8E-45 T 14-10-2018 VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 Gene3D G3DSA:3.40.190.10 92 290 4.1E-63 T 14-10-2018 VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 Gene3D G3DSA:1.10.10.10 3 90 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 Pfam PF03466 LysR substrate binding domain 88 292 5.1E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_06135 326f1774978d32d2af0b9f6070da6879 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_14975 d41a1d4b1ab88547641339e2afe971a6 337 Pfam PF01757 Acyltransferase family 7 327 8.4E-31 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEJY3_12650 689109ad1f80af332cb45337e2cd78fb 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEJY3_12650 689109ad1f80af332cb45337e2cd78fb 337 Pfam PF01136 Peptidase family U32 75 336 1.3E-69 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEJY3_11145 7d7708f790e959210df7918c5e6cdf69 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 2.6E-74 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 VEJY3_09220 574f1241f795c7bea0f40880cd29e5f7 113 Pfam PF01548 Transposase 10 112 6.8E-8 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VEJY3_02790 9bfbf5e6cd6171e346f684ecaacef74f 204 SUPERFAMILY SSF48452 89 188 2.13E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_02790 9bfbf5e6cd6171e346f684ecaacef74f 204 Gene3D G3DSA:1.25.40.10 7 203 1.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_02790 9bfbf5e6cd6171e346f684ecaacef74f 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 4.3E-55 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VEJY3_02790 9bfbf5e6cd6171e346f684ecaacef74f 204 PIRSF PIRSF006170 1 204 1.0E-51 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 PIRSF PIRSF006169 1 70 6.4E-35 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 SUPERFAMILY SSF118001 1 69 7.85E-28 T 14-10-2018 IPR036685 YehU-like superfamily VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 Gene3D G3DSA:1.10.10.610 1 70 4.8E-29 T 14-10-2018 IPR036685 YehU-like superfamily VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 3.0E-23 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.3E-33 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEJY3_14255 36069ab7cfa3fcfd8b1ce13fc3379b1f 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.709 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEJY3_13975 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VEJY3_13975 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_13975 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_21576 8b7c34f5682a3ebab457412b99d19837 344 Gene3D G3DSA:3.40.190.170 40 344 3.3E-76 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_21576 8b7c34f5682a3ebab457412b99d19837 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 327 1.6E-44 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 SUPERFAMILY SSF51735 141 303 8.7E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 Gene3D G3DSA:3.40.50.720 146 282 3.5E-84 T 14-10-2018 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 Pfam PF00107 Zinc-binding dehydrogenase 171 298 1.1E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 Gene3D G3DSA:3.90.180.10 13 318 3.5E-84 T 14-10-2018 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 SUPERFAMILY SSF50129 1 170 7.3E-50 T 14-10-2018 IPR011032 GroES-like superfamily VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 SMART SM00829 7 307 2.3E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEJY3_09390 2373d27dbbdc0956400ce961f1f6ded4 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.2E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEJY3_00330 b086973015e2844c58bdb0ca8a67d594 75 Pfam PF04964 Flp/Fap pilin component 21 67 2.1E-12 T 14-10-2018 IPR007047 Flp/Fap pilin component VEJY3_06620 981bee4a7d0918d6e70b2219060c5888 460 SMART SM00382 251 383 2.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_06620 981bee4a7d0918d6e70b2219060c5888 460 SUPERFAMILY SSF52540 210 446 1.8E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06620 981bee4a7d0918d6e70b2219060c5888 460 Gene3D G3DSA:3.40.50.300 201 398 2.0E-40 T 14-10-2018 VEJY3_06620 981bee4a7d0918d6e70b2219060c5888 460 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 256 379 1.6E-25 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 78 9.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 Pfam PF07729 FCD domain 172 293 1.3E-8 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 Gene3D G3DSA:1.10.10.10 15 79 1.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 SMART SM00895 170 294 6.8E-8 T 14-10-2018 IPR011711 GntR, C-terminal VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 SUPERFAMILY SSF46785 32 79 3.41E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 SUPERFAMILY SSF48008 168 300 1.41E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_07815 b02b44f6013246df049135dfa9ba84a6 326 Gene3D G3DSA:1.20.120.530 164 306 5.8E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEJY3_21166 56375a10a1d0cc1fd23750a43857f5df 98 Pfam PF03334 Na+/H+ antiporter subunit 8 86 8.2E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 VEJY3_05935 2a86307acc48b4c7a9aa03c9b20ec083 383 Gene3D G3DSA:1.20.1530.10 3 381 2.7E-147 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VEJY3_05935 2a86307acc48b4c7a9aa03c9b20ec083 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.63 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEJY3_05935 2a86307acc48b4c7a9aa03c9b20ec083 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 6.9E-144 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEJY3_16641 cff267c600458febdb52114ac491d329 895 PIRSF PIRSF035905 1 895 1.3E-246 T 14-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein VEJY3_16641 cff267c600458febdb52114ac491d329 895 Pfam PF10101 Predicted membrane protein (DUF2339) 134 885 1.5E-103 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane VEJY3_15971 c08f3d16b45b0f76cdfbae3b7b0b4ac1 385 SMART SM00267 180 362 4.7E-47 T 14-10-2018 IPR000160 GGDEF domain VEJY3_15971 c08f3d16b45b0f76cdfbae3b7b0b4ac1 385 SUPERFAMILY SSF55073 196 364 1.65E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VEJY3_15971 c08f3d16b45b0f76cdfbae3b7b0b4ac1 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 1.3E-39 T 14-10-2018 IPR000160 GGDEF domain VEJY3_15971 c08f3d16b45b0f76cdfbae3b7b0b4ac1 385 Gene3D G3DSA:3.30.70.270 186 377 1.1E-48 T 14-10-2018 VEJY3_14755 74b29b0c53d7e1b8436ab002b0ee3f22 163 PIRSF PIRSF016548 3 163 2.4E-67 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VEJY3_14755 74b29b0c53d7e1b8436ab002b0ee3f22 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 2.6E-55 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VEJY3_14755 74b29b0c53d7e1b8436ab002b0ee3f22 163 Gene3D G3DSA:1.20.120.1370 1 156 2.9E-52 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily VEJY3_08730 598347ade3f0643c77b3d5b486d14e29 351 Pfam PF00534 Glycosyl transferases group 1 167 308 2.1E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VEJY3_08730 598347ade3f0643c77b3d5b486d14e29 351 SUPERFAMILY SSF53756 12 337 5.02E-54 T 14-10-2018 VEJY3_08730 598347ade3f0643c77b3d5b486d14e29 351 Gene3D G3DSA:3.40.50.2000 19 333 4.0E-44 T 14-10-2018 VEJY3_08730 598347ade3f0643c77b3d5b486d14e29 351 Pfam PF13439 Glycosyltransferase Family 4 18 156 8.9E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEJY3_08730 598347ade3f0643c77b3d5b486d14e29 351 Gene3D G3DSA:3.40.50.2000 165 324 4.0E-44 T 14-10-2018 VEJY3_03715 cbde99fdec6a8e42daa2a6ec684bc964 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 1.3E-34 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_16121 ab71a6201d2a335bc1d853dce52d141a 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 174 8.0E-62 T 14-10-2018 IPR010323 Protein of unknown function DUF924 VEJY3_16121 ab71a6201d2a335bc1d853dce52d141a 178 SUPERFAMILY SSF48452 2 174 3.07E-66 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16121 ab71a6201d2a335bc1d853dce52d141a 178 Gene3D G3DSA:1.25.40.10 78 178 5.6E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_16121 ab71a6201d2a335bc1d853dce52d141a 178 Gene3D G3DSA:1.20.58.320 1 77 3.8E-26 T 14-10-2018 VEJY3_15345 a1258d7832cbf22b452704ceb2b651a6 197 Pfam PF11355 Protein of unknown function (DUF3157) 2 196 1.8E-70 T 14-10-2018 IPR021501 Protein of unknown function DUF3157 VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 Pfam PF00850 Histone deacetylase domain 43 325 7.0E-79 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 Gene3D G3DSA:3.40.800.20 1 360 1.9E-115 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 SUPERFAMILY SSF52768 2 340 9.11E-96 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 PRINTS PR01270 Histone deacetylase superfamily signature 136 159 6.1E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 PRINTS PR01270 Histone deacetylase superfamily signature 255 265 6.1E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_22506 9d101ba0c24e3a6519ef1c11bafb14a7 367 PRINTS PR01270 Histone deacetylase superfamily signature 170 185 6.1E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_19536 f7e12ee05027a074c8362ea5cb6a0ba1 257 Pfam PF13462 Thioredoxin 78 228 1.3E-33 T 14-10-2018 IPR012336 Thioredoxin-like fold VEJY3_19536 f7e12ee05027a074c8362ea5cb6a0ba1 257 SUPERFAMILY SSF52833 65 246 1.88E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_19536 f7e12ee05027a074c8362ea5cb6a0ba1 257 Gene3D G3DSA:3.40.30.10 78 246 4.2E-56 T 14-10-2018 VEJY3_19536 f7e12ee05027a074c8362ea5cb6a0ba1 257 Gene3D G3DSA:1.10.40.80 132 191 4.2E-56 T 14-10-2018 VEJY3_12755 e70e4ff9633ab2ccf50b73754180a5af 281 Pfam PF01769 Divalent cation transporter 142 271 2.2E-26 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEJY3_12755 e70e4ff9633ab2ccf50b73754180a5af 281 Gene3D G3DSA:1.10.357.20 94 278 3.2E-53 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEJY3_12755 e70e4ff9633ab2ccf50b73754180a5af 281 SUPERFAMILY SSF161093 99 278 1.06E-45 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEJY3_18936 2434331cd20f0e1bf12a50c80b6f9509 133 Gene3D G3DSA:3.90.79.10 1 127 2.3E-20 T 14-10-2018 VEJY3_18936 2434331cd20f0e1bf12a50c80b6f9509 133 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEJY3_18936 2434331cd20f0e1bf12a50c80b6f9509 133 Pfam PF00293 NUDIX domain 7 107 1.9E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEJY3_18936 2434331cd20f0e1bf12a50c80b6f9509 133 SUPERFAMILY SSF55811 2 110 3.11E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEJY3_07225 8e92030cba9836bd693f2b4d1a71577c 67 PIRSF PIRSF036704 1 67 8.4E-34 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VEJY3_08585 fc4f95fb3e82298f03f1fabd04533982 274 SUPERFAMILY SSF51182 15 253 2.09E-65 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_08585 fc4f95fb3e82298f03f1fabd04533982 274 Gene3D G3DSA:2.60.120.10 15 123 1.1E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_08585 fc4f95fb3e82298f03f1fabd04533982 274 Pfam PF04962 KduI/IolB family 7 264 1.2E-104 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VEJY3_08585 fc4f95fb3e82298f03f1fabd04533982 274 Gene3D G3DSA:2.60.120.10 124 271 8.8E-57 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_08585 fc4f95fb3e82298f03f1fabd04533982 274 PIRSF PIRSF036628 1 270 1.6E-103 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VEJY3_12225 8032457d9b2fc0d9dafe71131f9efcb2 256 PIRSF PIRSF009437 1 256 1.5E-105 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VEJY3_12225 8032457d9b2fc0d9dafe71131f9efcb2 256 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 253 35.807 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VEJY3_12225 8032457d9b2fc0d9dafe71131f9efcb2 256 SMART SM00900 143 241 1.4E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_12225 8032457d9b2fc0d9dafe71131f9efcb2 256 Pfam PF04205 FMN-binding domain 143 238 1.3E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEJY3_05485 5369d3e375aaa417fd19c95dd083ac98 280 Pfam PF07103 Protein of unknown function (DUF1365) 20 256 5.3E-69 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 VEJY3_04980 e4b1d70d19b753f020de20c7072022c0 385 SUPERFAMILY SSF56935 96 361 2.98E-11 T 14-10-2018 VEJY3_12050 91925fa8ffc5cd79749cdb37b78f049b 256 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 214 240 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VEJY3_12050 91925fa8ffc5cd79749cdb37b78f049b 256 Pfam PF01148 Cytidylyltransferase family 3 256 2.0E-65 T 14-10-2018 VEJY3_08715 4bd824a1d6fea613b2d20a8d80a1efb6 266 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 254 4.5E-48 T 14-10-2018 VEJY3_08715 4bd824a1d6fea613b2d20a8d80a1efb6 266 Gene3D G3DSA:3.40.190.10 24 235 6.4E-31 T 14-10-2018 VEJY3_08715 4bd824a1d6fea613b2d20a8d80a1efb6 266 Gene3D G3DSA:3.40.190.10 103 203 6.4E-31 T 14-10-2018 VEJY3_08715 4bd824a1d6fea613b2d20a8d80a1efb6 266 SUPERFAMILY SSF53850 19 232 5.94E-17 T 14-10-2018 VEJY3_04905 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like VEJY3_11340 08d564ff28a8bba6474b994d42df6586 207 Pfam PF03458 UPF0126 domain 92 163 6.2E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VEJY3_11340 08d564ff28a8bba6474b994d42df6586 207 Pfam PF03458 UPF0126 domain 5 76 7.8E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VEJY3_04535 68debe25b6c34c3c476004c2c9e35704 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 163 5.0E-46 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 VEJY3_07980 ee39694634ba07dfbeae4003665be06d 128 Pfam PF06339 Ectoine synthase 1 127 7.7E-60 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_07980 ee39694634ba07dfbeae4003665be06d 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 1.0E-54 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_07980 ee39694634ba07dfbeae4003665be06d 128 Gene3D G3DSA:2.60.120.10 1 116 9.3E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_07980 ee39694634ba07dfbeae4003665be06d 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.48 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEJY3_07980 ee39694634ba07dfbeae4003665be06d 128 SUPERFAMILY SSF51182 10 127 4.45E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_18571 add24ccb2a3e7727005a2de795a82207 382 Pfam PF16113 Enoyl-CoA hydratase/isomerase 24 362 4.6E-103 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VEJY3_18571 add24ccb2a3e7727005a2de795a82207 382 Gene3D G3DSA:3.90.226.10 9 377 2.7E-111 T 14-10-2018 VEJY3_18571 add24ccb2a3e7727005a2de795a82207 382 SUPERFAMILY SSF52096 24 348 4.98E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 Pfam PF00501 AMP-binding enzyme 54 465 3.7E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 552 8.3E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 Gene3D G3DSA:3.40.50.12780 38 461 1.5E-111 T 14-10-2018 VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 SUPERFAMILY SSF56801 24 565 5.36E-153 T 14-10-2018 VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 14-10-2018 IPR020845 AMP-binding, conserved site VEJY3_20376 480663fabc049da9b0f82ca8d48e228e 578 Gene3D G3DSA:3.30.300.310 462 564 7.8E-28 T 14-10-2018 VEJY3_15195 a2e4d52c97343d931b88b459dbb958ab 251 Pfam PF09836 Putative DNA-binding domain 6 94 6.4E-21 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 SUPERFAMILY SSF109604 181 400 1.57E-42 T 14-10-2018 VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 PIRSF PIRSF003180 1 403 6.7E-169 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 Gene3D G3DSA:1.10.3210.10 195 384 5.4E-19 T 14-10-2018 VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 Pfam PF08668 HDOD domain 205 318 7.0E-11 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 Pfam PF00563 EAL domain 74 190 2.6E-14 T 14-10-2018 IPR001633 EAL domain VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 SUPERFAMILY SSF141868 5 192 6.41E-29 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 SMART SM00052 2 195 0.0012 T 14-10-2018 IPR001633 EAL domain VEJY3_05600 6f5e8c47f98d3a1654430a9a4ede97bd 404 Gene3D G3DSA:3.20.20.450 3 194 1.2E-18 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_23001 c5b39cc74e1bcc591dd34401ade4f7b3 267 Gene3D G3DSA:3.40.50.1820 3 261 2.3E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_23001 c5b39cc74e1bcc591dd34401ade4f7b3 267 Pfam PF12146 Serine aminopeptidase, S33 8 242 1.1E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VEJY3_23001 c5b39cc74e1bcc591dd34401ade4f7b3 267 SUPERFAMILY SSF53474 5 261 2.4E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_01205 937288bd7cfd476eb64eb7220d3a78a1 304 Pfam PF05686 Glycosyl transferase family 90 132 280 5.4E-15 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein VEJY3_01205 937288bd7cfd476eb64eb7220d3a78a1 304 SMART SM00672 73 299 8.9E-4 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein VEJY3_17946 6fc22089dc2f9afb98ca5699d56e161c 470 Pfam PF03606 C4-dicarboxylate anaerobic carrier 23 465 3.2E-70 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VEJY3_08940 ac6f98cc4d05e880e920f77425b710f4 197 Gene3D G3DSA:3.40.50.10490 1 196 6.5E-55 T 14-10-2018 VEJY3_08940 ac6f98cc4d05e880e920f77425b710f4 197 SUPERFAMILY SSF53697 10 194 1.54E-40 T 14-10-2018 VEJY3_08940 ac6f98cc4d05e880e920f77425b710f4 197 Pfam PF01380 SIS domain 35 164 4.0E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 Gene3D G3DSA:3.90.226.10 3 225 2.9E-84 T 14-10-2018 VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 SUPERFAMILY SSF52096 21 284 1.21E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.445 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 35 282 3.1E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEJY3_04275 3e6d752b82d019a852b37943c8d3c636 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEJY3_16466 8d7869d25a30b0a7e82c213d445b7809 119 Pfam PF05656 Protein of unknown function (DUF805) 11 111 3.3E-35 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VEJY3_08885 978ff269213fde2921455e579379ba9e 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.1E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_12250 265f8cf92a552c05127ef8530818da0e 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 7.1E-51 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG VEJY3_07360 843e683bde2d2610a86c6da1c7d11fa3 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 9.2E-9 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 SUPERFAMILY SSF161070 3 476 2.35E-146 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 119 1.9E-38 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 466 1.9E-76 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_10620 48f07da25aba87f437b54bdbdd417bfd 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 5.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_20406 df4165e51bc4361bb2b7a221ae100efc 350 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 323 334 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEJY3_20406 df4165e51bc4361bb2b7a221ae100efc 350 SUPERFAMILY SSF54862 211 335 1.05E-7 T 14-10-2018 VEJY3_20406 df4165e51bc4361bb2b7a221ae100efc 350 Pfam PF17179 4Fe-4S dicluster domain 232 336 7.8E-28 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEJY3_16446 e7f1cdbd8ad58c5eac11abdcb19d586a 50 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 42 9.0E-22 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 VEJY3_16446 e7f1cdbd8ad58c5eac11abdcb19d586a 50 PIRSF PIRSF037205 1 50 1.7E-24 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 VEJY3_13640 6b48b6dd688903a0a9181466c632a1c1 84 Pfam PF01722 BolA-like protein 18 74 9.6E-15 T 14-10-2018 IPR002634 BolA protein VEJY3_13640 6b48b6dd688903a0a9181466c632a1c1 84 SUPERFAMILY SSF82657 4 82 1.15E-28 T 14-10-2018 IPR036065 BolA-like superfamily VEJY3_13640 6b48b6dd688903a0a9181466c632a1c1 84 PIRSF PIRSF003113 2 83 1.9E-22 T 14-10-2018 IPR002634 BolA protein VEJY3_13640 6b48b6dd688903a0a9181466c632a1c1 84 Gene3D G3DSA:3.30.300.90 1 84 2.7E-33 T 14-10-2018 VEJY3_09315 5969f16a28dc6983c0c50afb3eb15555 400 Gene3D G3DSA:2.70.98.10 63 261 2.6E-6 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEJY3_09315 5969f16a28dc6983c0c50afb3eb15555 400 SUPERFAMILY SSF74650 85 217 1.19E-6 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEJY3_09585 283cd6e3e1374314a2d64048e8549a4d 258 Pfam PF02371 Transposase IS116/IS110/IS902 family 134 211 5.3E-15 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VEJY3_04235 28a800f9d739f67ba004819b21de27c4 183 Pfam PF01694 Rhomboid family 34 173 2.8E-15 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VEJY3_04235 28a800f9d739f67ba004819b21de27c4 183 SUPERFAMILY SSF144091 4 173 2.35E-28 T 14-10-2018 VEJY3_04235 28a800f9d739f67ba004819b21de27c4 183 Gene3D G3DSA:1.20.1540.10 1 181 1.9E-20 T 14-10-2018 IPR035952 Rhomboid-like superfamily VEJY3_09600 dc872cf468e3f8d0a7b7f931bbc08f55 284 Pfam PF13280 WYL domain 124 200 1.0E-11 T 14-10-2018 IPR026881 WYL domain VEJY3_09600 dc872cf468e3f8d0a7b7f931bbc08f55 284 PIRSF PIRSF015558 1 284 4.0E-95 T 14-10-2018 IPR016634 WYL domain protein, s026 type VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-41 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 PIRSF PIRSF029827 1 90 2.6E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.194 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 Gene3D G3DSA:1.10.3880.10 1 90 4.2E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 5.0E-39 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEJY3_13515 9cc9dcc97f2ed1ce7efe35fda37665c8 90 SUPERFAMILY SSF111148 1 89 1.96E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VEJY3_09820 8ccdcee037cb529e45f13a82effbb811 282 TIGRFAM TIGR04255 sporadTIGR04255: TIGR04255 family protein 5 267 2.5E-16 T 14-10-2018 IPR026349 Conserved hypothetical protein CHP04255 VEJY3_17506 9bb917c26642124f2a9b8251f8261889 423 Pfam PF01554 MatE 2 160 1.1E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_17506 9bb917c26642124f2a9b8251f8261889 423 Pfam PF01554 MatE 219 376 6.8E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_17506 9bb917c26642124f2a9b8251f8261889 423 PIRSF PIRSF006603 1 421 1.1E-75 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PIRSF PIRSF002764 1 222 1.3E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 Pfam PF03379 CcmB protein 5 219 5.0E-89 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 7.8E-70 T 14-10-2018 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 7.8E-70 T 14-10-2018 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 7.8E-70 T 14-10-2018 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 7.8E-70 T 14-10-2018 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 7.8E-70 T 14-10-2018 VEJY3_11445 d9f5de8b48b6585b02ab84639ded6d6d 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 7.8E-70 T 14-10-2018 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.2E-106 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 138.46 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 Pfam PF02504 Fatty acid synthesis protein 5 325 4.4E-102 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 Gene3D G3DSA:3.40.718.10 2 340 2.2E-120 T 14-10-2018 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 PIRSF PIRSF002465 2 339 4.1E-124 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEJY3_10700 9c42be7f3dbd37a8f8b3a1ad214485a3 341 SUPERFAMILY SSF53659 4 336 6.99E-103 T 14-10-2018 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 SUPERFAMILY SSF53335 34 189 7.02E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 2.6E-5 T 14-10-2018 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 2.6E-5 T 14-10-2018 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 2.6E-5 T 14-10-2018 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 Pfam PF05175 Methyltransferase small domain 41 129 2.4E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.225 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VEJY3_02285 342a66ddff17cc80a153de7d8fa9f66f 239 Gene3D G3DSA:3.40.50.150 6 235 9.7E-56 T 14-10-2018 VEJY3_09980 408c836877740b17281865132b2f453c 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 382 3.2E-18 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEJY3_13960 c9507564034f5240819938779b97aa8b 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.9E-23 T 14-10-2018 IPR014318 Phage shock protein, PspG VEJY3_07365 0cd3a42c174f48bdcc8b10966f34727f 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 3.8E-81 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VEJY3_07365 0cd3a42c174f48bdcc8b10966f34727f 206 SUPERFAMILY SSF46626 21 202 2.62E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_07365 0cd3a42c174f48bdcc8b10966f34727f 206 Gene3D G3DSA:1.10.760.10 46 206 1.4E-71 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEJY3_09650 e81373b5ae95a4397d7c45e8d22c5838 44 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 4.1E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_04850 fbb7bac5cf42da785d237a39fe61be88 471 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 1 153 1.3E-55 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VEJY3_04850 fbb7bac5cf42da785d237a39fe61be88 471 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 225 468 7.4E-109 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 SUPERFAMILY SSF53850 97 293 5.0E-12 T 14-10-2018 VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 Gene3D G3DSA:1.10.10.10 1 86 9.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 SUPERFAMILY SSF46785 4 81 1.29E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 Gene3D G3DSA:3.40.190.10 169 242 4.9E-10 T 14-10-2018 VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 Pfam PF03466 LysR substrate binding domain 97 241 4.9E-8 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_19151 f00267d9534f128c4f57396a1dbe084e 295 Gene3D G3DSA:3.40.190.10 88 168 4.9E-10 T 14-10-2018 VEJY3_01215 de1b47fc04a0937053fc7979e0db1fd1 116 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 1.2E-31 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 VEJY3_01210 886316bea7541a69ea342adf15da902a 141 Pfam PF05656 Protein of unknown function (DUF805) 8 139 7.7E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VEJY3_23256 adb80c265ff6f615001c32fd5a8f86a5 281 Pfam PF00924 Mechanosensitive ion channel 60 184 2.2E-16 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEJY3_23256 adb80c265ff6f615001c32fd5a8f86a5 281 SUPERFAMILY SSF50182 96 169 4.9E-10 T 14-10-2018 IPR010920 LSM domain superfamily VEJY3_22771 7d81f4df8a21a51e40f9c1d05971f1be 338 SUPERFAMILY SSF54427 185 328 1.55E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22771 7d81f4df8a21a51e40f9c1d05971f1be 338 Pfam PF12680 SnoaL-like domain 11 132 5.2E-9 T 14-10-2018 IPR037401 SnoaL-like domain VEJY3_22771 7d81f4df8a21a51e40f9c1d05971f1be 338 SUPERFAMILY SSF54427 5 153 2.91E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_22771 7d81f4df8a21a51e40f9c1d05971f1be 338 Gene3D G3DSA:3.10.450.50 203 332 1.9E-11 T 14-10-2018 VEJY3_22771 7d81f4df8a21a51e40f9c1d05971f1be 338 Gene3D G3DSA:3.10.450.50 5 150 6.1E-22 T 14-10-2018 VEJY3_21186 ecab23ba1af9e60678775f8ae4171010 118 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 112 4.9E-28 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like VEJY3_19961 bbca94a176162fa50ba5a4bc16f0e252 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 7.7E-33 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 VEJY3_17201 02d66b35edc1ad2be124b68f26cb97bc 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 5.2E-60 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 VEJY3_18806 f68c77c54efd97a71231272c6c2b50b5 306 SUPERFAMILY SSF103481 39 136 3.79E-13 T 14-10-2018 VEJY3_18806 f68c77c54efd97a71231272c6c2b50b5 306 Pfam PF00892 EamA-like transporter family 149 289 5.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_18806 f68c77c54efd97a71231272c6c2b50b5 306 Pfam PF00892 EamA-like transporter family 9 135 1.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_18806 f68c77c54efd97a71231272c6c2b50b5 306 SUPERFAMILY SSF103481 181 292 3.79E-10 T 14-10-2018 VEJY3_16861 f3de18a93c129aa414a7397e65f541c3 262 Gene3D G3DSA:1.10.3720.10 2 255 6.6E-39 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_16861 f3de18a93c129aa414a7397e65f541c3 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 260 9.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_16861 f3de18a93c129aa414a7397e65f541c3 262 SUPERFAMILY SSF161098 12 259 1.96E-44 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23401 b8e856a36c085b381df6aab2ac968541 377 Pfam PF13533 Biotin-lipoyl like 63 111 6.8E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEJY3_23401 b8e856a36c085b381df6aab2ac968541 377 Gene3D G3DSA:2.40.50.100 64 257 4.0E-35 T 14-10-2018 VEJY3_23401 b8e856a36c085b381df6aab2ac968541 377 Gene3D G3DSA:2.40.30.170 258 342 4.0E-35 T 14-10-2018 VEJY3_23401 b8e856a36c085b381df6aab2ac968541 377 Gene3D G3DSA:1.10.287.470 96 219 4.0E-35 T 14-10-2018 VEJY3_23401 b8e856a36c085b381df6aab2ac968541 377 SUPERFAMILY SSF111369 63 115 3.14E-6 T 14-10-2018 VEJY3_07965 7c0c570f6af7dfe6d533ffe104ed26a9 388 Pfam PF12698 ABC-2 family transporter protein 16 369 1.0E-38 T 14-10-2018 VEJY3_03825 8f91f55b29554ff5951cac737c30cc7c 252 Gene3D G3DSA:3.40.1390.30 14 237 4.9E-82 T 14-10-2018 VEJY3_03825 8f91f55b29554ff5951cac737c30cc7c 252 Gene3D G3DSA:3.40.1390.30 97 223 4.9E-82 T 14-10-2018 VEJY3_03825 8f91f55b29554ff5951cac737c30cc7c 252 SUPERFAMILY SSF102705 1 251 8.37E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VEJY3_03825 8f91f55b29554ff5951cac737c30cc7c 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 3.4E-59 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VEJY3_22486 619b3edc8518c25ec23f343e97f0b40a 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 7.8E-267 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VEJY3_05020 48fa164fd62db4fa128bb8c7cbccdf33 127 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 68 116 2.8E-10 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VEJY3_09000 f39a6f983e7bf323ab8425824f205876 255 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 29 215 9.6E-19 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase VEJY3_09000 f39a6f983e7bf323ab8425824f205876 255 SUPERFAMILY SSF51197 18 241 2.36E-44 T 14-10-2018 VEJY3_09000 f39a6f983e7bf323ab8425824f205876 255 Gene3D G3DSA:2.60.120.620 7 255 9.7E-41 T 14-10-2018 VEJY3_18851 aedcc263b5ba4d223d6fbc5d64722797 174 Pfam PF04891 NifQ 13 170 5.2E-46 T 14-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 VEJY3_08855 5915d1ac91439d4e425022c5c4ca17f3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 9.8E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_08895 5915d1ac91439d4e425022c5c4ca17f3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 9.8E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_14335 e0e7399b02c11ab5c331892c66ffb917 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 2.5E-22 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 VEJY3_01420 1d907db5f3343af5275de7e31e579f79 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.2E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEJY3_01420 1d907db5f3343af5275de7e31e579f79 206 Gene3D G3DSA:1.10.287.460 4 68 6.1E-19 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VEJY3_01420 1d907db5f3343af5275de7e31e579f79 206 Gene3D G3DSA:3.10.50.40 69 206 9.7E-50 T 14-10-2018 VEJY3_01420 1d907db5f3343af5275de7e31e579f79 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.0E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEJY3_01420 1d907db5f3343af5275de7e31e579f79 206 SUPERFAMILY SSF54534 7 205 1.1E-54 T 14-10-2018 VEJY3_02010 078c31aac3e1a67e554fa3422949a110 222 SMART SM00749 125 188 6.3E-4 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VEJY3_02010 078c31aac3e1a67e554fa3422949a110 222 Pfam PF04972 BON domain 120 185 2.9E-18 T 14-10-2018 IPR007055 BON domain VEJY3_02010 078c31aac3e1a67e554fa3422949a110 222 Pfam PF04972 BON domain 44 110 3.2E-10 T 14-10-2018 IPR007055 BON domain VEJY3_10855 43261e1e095c9b595b0138d24f52b5ad 300 Gene3D G3DSA:1.10.3720.10 96 296 8.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10855 43261e1e095c9b595b0138d24f52b5ad 300 SUPERFAMILY SSF161098 97 281 1.44E-26 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_10855 43261e1e095c9b595b0138d24f52b5ad 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 7.4E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEJY3_10855 43261e1e095c9b595b0138d24f52b5ad 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.2E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_20051 2e40e6288c97fa8047df500b3cfbb377 262 SMART SM00052 24 255 7.3E-10 T 14-10-2018 IPR001633 EAL domain VEJY3_20051 2e40e6288c97fa8047df500b3cfbb377 262 Gene3D G3DSA:3.20.20.450 19 251 1.4E-41 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_20051 2e40e6288c97fa8047df500b3cfbb377 262 Pfam PF00563 EAL domain 26 250 2.0E-41 T 14-10-2018 IPR001633 EAL domain VEJY3_20051 2e40e6288c97fa8047df500b3cfbb377 262 SUPERFAMILY SSF141868 28 254 2.62E-40 T 14-10-2018 IPR035919 EAL domain superfamily VEJY3_05810 3384f9b5ff6d2fb6f73c5daeca996275 569 SUPERFAMILY SSF161098 302 541 2.07E-25 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_05810 3384f9b5ff6d2fb6f73c5daeca996275 569 Gene3D G3DSA:1.10.3720.10 300 548 9.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_05810 3384f9b5ff6d2fb6f73c5daeca996275 569 Gene3D G3DSA:1.10.3720.10 4 279 3.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_05810 3384f9b5ff6d2fb6f73c5daeca996275 569 SUPERFAMILY SSF161098 5 275 2.94E-24 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09630 2a0bfbd36c30fb837d62b3a49c4b5cca 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.3E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_17961 2c9f517e9a86acc9391c27f0b78099c0 484 Pfam PF03553 Na+/H+ antiporter family 160 453 1.1E-61 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_19631 c9acc2e925e8b59a12cfbaed2bb81d4c 511 Pfam PF08811 Protein of unknown function (DUF1800) 32 500 5.7E-93 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 VEJY3_03570 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEJY3_03570 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEJY3_03570 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEJY3_03570 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEJY3_10740 5ff0471fabe9df226d366de2d5849cbb 201 Gene3D G3DSA:3.40.50.300 11 201 2.5E-70 T 14-10-2018 VEJY3_10740 5ff0471fabe9df226d366de2d5849cbb 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 4.6E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VEJY3_10740 5ff0471fabe9df226d366de2d5849cbb 201 PIRSF PIRSF015617 6 201 1.7E-65 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VEJY3_10740 5ff0471fabe9df226d366de2d5849cbb 201 SUPERFAMILY SSF52540 12 201 8.86E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_10740 5ff0471fabe9df226d366de2d5849cbb 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 SUPERFAMILY SSF51445 49 451 2.58E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 Gene3D G3DSA:2.60.40.1180 448 531 3.0E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 Gene3D G3DSA:3.20.20.80 45 447 8.8E-72 T 14-10-2018 VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 SMART SM00642 55 420 5.5E-35 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 Pfam PF00128 Alpha amylase, catalytic domain 81 167 1.8E-26 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 Pfam PF00128 Alpha amylase, catalytic domain 198 384 2.8E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEJY3_23766 c36706f7ca2ecb4f46d65caef4eeb8f1 531 SUPERFAMILY SSF51011 451 528 4.4E-6 T 14-10-2018 VEJY3_08380 c4e846f2c9c1ac14ee295df03e8c13c5 145 Gene3D G3DSA:3.40.630.30 3 142 1.8E-30 T 14-10-2018 VEJY3_08380 c4e846f2c9c1ac14ee295df03e8c13c5 145 Pfam PF13673 Acetyltransferase (GNAT) domain 21 140 6.6E-13 T 14-10-2018 IPR000182 GNAT domain VEJY3_08380 c4e846f2c9c1ac14ee295df03e8c13c5 145 SUPERFAMILY SSF55729 4 141 2.79E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_19331 64fc900225f126769f027cec449529ef 268 SUPERFAMILY SSF161098 63 251 8.63E-17 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_19331 64fc900225f126769f027cec449529ef 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 257 9.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_19331 64fc900225f126769f027cec449529ef 268 Gene3D G3DSA:1.10.3720.10 57 265 9.0E-15 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_11550 e2b7299901d96a986d6d2ad677405258 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 4.5E-20 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VEJY3_12380 771c52ad049f65229d66255ccc8292be 351 SUPERFAMILY SSF51695 22 349 8.11E-91 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEJY3_12380 771c52ad049f65229d66255ccc8292be 351 Gene3D G3DSA:3.20.20.190 21 350 1.5E-124 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEJY3_12380 771c52ad049f65229d66255ccc8292be 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 4.4E-64 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VEJY3_04710 2ff00b84e337a21130de60903c931cf7 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.041 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VEJY3_04710 2ff00b84e337a21130de60903c931cf7 106 Gene3D G3DSA:3.30.1390.10 1 106 2.8E-46 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEJY3_04710 2ff00b84e337a21130de60903c931cf7 106 SUPERFAMILY SSF54736 21 105 1.1E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEJY3_04710 2ff00b84e337a21130de60903c931cf7 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 3.0E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VEJY3_04260 5c71e9dcecb93da6fb5a8af669342495 435 SUPERFAMILY SSF56322 31 425 1.96E-100 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_04260 5c71e9dcecb93da6fb5a8af669342495 435 Pfam PF00425 chorismate binding enzyme 165 417 1.6E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEJY3_04260 5c71e9dcecb93da6fb5a8af669342495 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.093 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VEJY3_04260 5c71e9dcecb93da6fb5a8af669342495 435 Gene3D G3DSA:3.60.120.10 1 429 4.0E-128 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VEJY3_01635 6b3810f76787d28215177680724b6efc 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.978 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VEJY3_01635 6b3810f76787d28215177680724b6efc 268 PIRSF PIRSF000903 1 268 3.1E-123 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VEJY3_01635 6b3810f76787d28215177680724b6efc 268 SUPERFAMILY SSF56300 3 252 9.64E-58 T 14-10-2018 VEJY3_01635 6b3810f76787d28215177680724b6efc 268 Gene3D G3DSA:3.60.21.10 1 268 3.9E-79 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_01635 6b3810f76787d28215177680724b6efc 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 166 4.7E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_11680 827ebd72c94f6ed4c4c682eaef007992 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 176 7.0E-35 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VEJY3_11680 827ebd72c94f6ed4c4c682eaef007992 233 SUPERFAMILY SSF55166 19 175 7.46E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_11680 827ebd72c94f6ed4c4c682eaef007992 233 Gene3D G3DSA:3.30.1380.10 3 195 1.6E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_08495 689692c23a8a8f9a34214d1648399354 372 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 155 183 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEJY3_08495 689692c23a8a8f9a34214d1648399354 372 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 363 5.5E-106 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEJY3_08495 689692c23a8a8f9a34214d1648399354 372 Gene3D G3DSA:3.40.50.1970 1 166 2.6E-44 T 14-10-2018 VEJY3_08495 689692c23a8a8f9a34214d1648399354 372 Gene3D G3DSA:1.20.1090.10 168 370 6.1E-61 T 14-10-2018 VEJY3_08495 689692c23a8a8f9a34214d1648399354 372 SUPERFAMILY SSF56796 5 369 5.23E-104 T 14-10-2018 VEJY3_13340 bbd596a21b0485b0276c6408c9fc29cd 102 SUPERFAMILY SSF102829 6 95 6.41E-24 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily VEJY3_13340 bbd596a21b0485b0276c6408c9fc29cd 102 Pfam PF05164 Cell division protein ZapA 6 89 9.7E-20 T 14-10-2018 IPR007838 Cell division protein ZapA-like VEJY3_13340 bbd596a21b0485b0276c6408c9fc29cd 102 Gene3D G3DSA:1.10.20.30 1 47 2.5E-19 T 14-10-2018 VEJY3_19721 c0177f91a5ba017b37be40e614e6da77 224 Pfam PF05618 Putative ATP-dependant zinc protease 87 221 2.7E-42 T 14-10-2018 VEJY3_19721 c0177f91a5ba017b37be40e614e6da77 224 Gene3D G3DSA:2.40.70.10 85 211 3.2E-38 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_19721 c0177f91a5ba017b37be40e614e6da77 224 SUPERFAMILY SSF50630 87 218 1.19E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VEJY3_04150 805ab10eb332743b92683e5e996449b7 307 SUPERFAMILY SSF161098 68 294 4.19E-46 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_04150 805ab10eb332743b92683e5e996449b7 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 295 6.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04150 805ab10eb332743b92683e5e996449b7 307 Gene3D G3DSA:1.10.3720.10 64 305 8.6E-55 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18096 7b5be8ad0a25d45d6158f5de41124b61 225 SUPERFAMILY SSF89562 23 184 1.44E-44 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VEJY3_18096 7b5be8ad0a25d45d6158f5de41124b61 225 Pfam PF03737 Aldolase/RraA 28 174 3.3E-36 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VEJY3_18096 7b5be8ad0a25d45d6158f5de41124b61 225 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5 225 6.0E-105 T 14-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 VEJY3_18096 7b5be8ad0a25d45d6158f5de41124b61 225 Gene3D G3DSA:3.50.30.40 25 176 4.2E-50 T 14-10-2018 VEJY3_08490 9a32448de50c0387cc7fcfc3967248cf 230 Pfam PF06130 Phosphate propanoyltransferase 44 123 8.5E-28 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 VEJY3_08490 9a32448de50c0387cc7fcfc3967248cf 230 Pfam PF06130 Phosphate propanoyltransferase 153 218 4.6E-16 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 VEJY3_08490 9a32448de50c0387cc7fcfc3967248cf 230 PIRSF PIRSF010130 6 228 1.4E-86 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 VEJY3_23486 e4afe9f9d155239bbac70ae81a831343 239 Gene3D G3DSA:3.10.200.10 22 237 2.1E-84 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEJY3_23486 e4afe9f9d155239bbac70ae81a831343 239 SUPERFAMILY SSF51069 22 236 6.54E-77 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEJY3_23486 e4afe9f9d155239bbac70ae81a831343 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 4.9E-54 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VEJY3_23486 e4afe9f9d155239bbac70ae81a831343 239 SMART SM01057 23 239 8.1E-100 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VEJY3_16196 cd38fa287ae47ddb05a6e0436693e075 316 Pfam PF09084 NMT1/THI5 like 37 248 1.2E-70 T 14-10-2018 IPR015168 SsuA/THI5-like VEJY3_16196 cd38fa287ae47ddb05a6e0436693e075 316 SUPERFAMILY SSF53850 29 311 5.44E-49 T 14-10-2018 VEJY3_16196 cd38fa287ae47ddb05a6e0436693e075 316 Gene3D G3DSA:3.40.190.10 28 303 3.2E-72 T 14-10-2018 VEJY3_16196 cd38fa287ae47ddb05a6e0436693e075 316 Gene3D G3DSA:3.40.190.10 109 209 3.2E-72 T 14-10-2018 VEJY3_04600 837e3dd0e69b4574c889dd49e3b777b3 325 Gene3D G3DSA:2.40.128.140 17 323 4.1E-51 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily VEJY3_04600 837e3dd0e69b4574c889dd49e3b777b3 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 2.6E-81 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 VEJY3_13650 eba57fae84be5f48a45534f2ce8454d0 212 Gene3D G3DSA:3.10.450.710 25 204 3.0E-38 T 14-10-2018 VEJY3_13650 eba57fae84be5f48a45534f2ce8454d0 212 Pfam PF05494 MlaC protein 33 200 4.0E-46 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VEJY3_13650 eba57fae84be5f48a45534f2ce8454d0 212 PIRSF PIRSF004649 1 212 3.8E-56 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VEJY3_09050 9b9c6747bdbddf5a0b668673a9592f29 303 Pfam PF13737 Transposase DDE domain 19 126 3.0E-42 T 14-10-2018 IPR025668 Transposase DDE domain VEJY3_08915 978e416349640b66b12f446bca52f799 280 Gene3D G3DSA:1.10.150.130 180 275 6.6E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VEJY3_19006 419c8c6d13174e2f34c1a7afec1abc0f 334 Gene3D G3DSA:3.40.50.2300 33 302 2.2E-110 T 14-10-2018 VEJY3_19006 419c8c6d13174e2f34c1a7afec1abc0f 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 291 2.5E-32 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEJY3_19006 419c8c6d13174e2f34c1a7afec1abc0f 334 Gene3D G3DSA:3.40.50.2300 140 326 2.2E-110 T 14-10-2018 VEJY3_19006 419c8c6d13174e2f34c1a7afec1abc0f 334 SUPERFAMILY SSF53822 32 297 4.52E-34 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VEJY3_18506 b06b03e085fb0959a44e6d77d7ec3c17 325 PIRSF PIRSF034367 1 325 4.2E-196 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VEJY3_18506 b06b03e085fb0959a44e6d77d7ec3c17 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 320 1.3E-184 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VEJY3_13420 87f3b062bfc7b605db3b168da7414821 231 Pfam PF04231 Endonuclease I 33 227 6.2E-44 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VEJY3_13420 87f3b062bfc7b605db3b168da7414821 231 SUPERFAMILY SSF54060 20 228 2.71E-92 T 14-10-2018 VEJY3_07080 86dd611c2dffc544bbbe280689e39d05 456 Pfam PF01554 MatE 243 404 4.0E-36 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_07080 86dd611c2dffc544bbbe280689e39d05 456 Pfam PF01554 MatE 17 176 1.7E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_07080 86dd611c2dffc544bbbe280689e39d05 456 PIRSF PIRSF006603 5 452 4.7E-62 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_06625 abc1f3b15cfa1eeefbaec6f3ad2577ec 145 Pfam PF13699 Domain of unknown function (DUF4157) 47 112 2.6E-12 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 SUPERFAMILY SSF53850 90 292 1.3E-36 T 14-10-2018 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 Pfam PF03466 LysR substrate binding domain 89 290 4.5E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 Gene3D G3DSA:3.40.190.290 92 294 8.1E-45 T 14-10-2018 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 SUPERFAMILY SSF46785 1 85 5.76E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEJY3_04650 6d8439e37e176144493cf78da1e06b3f 295 Gene3D G3DSA:1.10.10.10 1 91 5.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_17576 713f52383e9f153d8fd1b602eb52dfc8 222 Gene3D G3DSA:2.30.30.40 53 127 4.0E-7 T 14-10-2018 VEJY3_17576 713f52383e9f153d8fd1b602eb52dfc8 222 Pfam PF08239 Bacterial SH3 domain 75 125 2.5E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VEJY3_22421 4116100fd2339186d9f96be14748f222 99 Gene3D G3DSA:3.30.70.860 2 99 5.6E-39 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VEJY3_22421 4116100fd2339186d9f96be14748f222 99 Pfam PF04175 Protein of unknown function (DUF406) 8 95 1.3E-26 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 SUPERFAMILY SSF53067 207 447 7.56E-33 T 14-10-2018 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 SUPERFAMILY SSF53067 1 205 1.86E-26 T 14-10-2018 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 Gene3D G3DSA:3.30.420.40 379 433 1.5E-11 T 14-10-2018 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 Pfam PF00012 Hsp70 protein 129 259 5.5E-12 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEJY3_20311 ac16b81bcbf877b531bb20750122946e 450 Gene3D G3DSA:3.90.640.10 336 378 1.5E-11 T 14-10-2018 VEJY3_16631 7778dfe9b420b1f659727e149eab4584 86 Pfam PF03891 Domain of unknown function (DUF333) 34 78 1.5E-17 T 14-10-2018 IPR005590 Protein of unknown function DUF333 VEJY3_04170 73422f0a5cf57e3c2cb29dc0aa07ee10 229 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 5.7E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_05540 f2e04f90e8dbdaccceabe6f599a44bed 533 Pfam PF03553 Na+/H+ antiporter family 165 497 2.7E-105 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_09265 c5a0d9b4e9f9ef81dfa1390da23b7ab7 299 Gene3D G3DSA:1.10.3720.10 26 287 2.5E-53 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09265 c5a0d9b4e9f9ef81dfa1390da23b7ab7 299 SUPERFAMILY SSF161098 32 299 3.01E-62 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_09265 c5a0d9b4e9f9ef81dfa1390da23b7ab7 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 4.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_04065 3768ed806c40740b58371b8a2e87beaa 365 SUPERFAMILY SSF159501 52 254 1.74E-5 T 14-10-2018 VEJY3_17011 82044bf39cf6469f8f14abae7591e66e 541 Pfam PF02378 Phosphotransferase system, EIIC 10 346 6.9E-71 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_17011 82044bf39cf6469f8f14abae7591e66e 541 SUPERFAMILY SSF55604 451 523 2.62E-16 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_17011 82044bf39cf6469f8f14abae7591e66e 541 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 462 479 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_17011 82044bf39cf6469f8f14abae7591e66e 541 Gene3D G3DSA:3.30.1360.60 447 526 4.3E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEJY3_17011 82044bf39cf6469f8f14abae7591e66e 541 Pfam PF00367 phosphotransferase system, EIIB 454 483 2.3E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEJY3_23881 f4ca875dedc381553e932f8b0db99ebe 141 Pfam PF07681 DoxX 19 96 5.5E-16 T 14-10-2018 IPR032808 DoxX family VEJY3_19341 bcecd7ad27bb2f950a07e4801a72820b 556 Pfam PF11949 Protein of unknown function (DUF3466) 242 543 1.4E-54 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VEJY3_04930 dae84a3853f6394bb47c73ecbf5e4d65 355 SUPERFAMILY SSF74653 264 354 3.53E-12 T 14-10-2018 VEJY3_04930 dae84a3853f6394bb47c73ecbf5e4d65 355 Gene3D G3DSA:3.30.1150.10 254 353 4.1E-21 T 14-10-2018 VEJY3_04930 dae84a3853f6394bb47c73ecbf5e4d65 355 Pfam PF06519 TolA C-terminal 254 352 1.3E-29 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VEJY3_20556 a9998e4676a2c88bb5c79e3e9826f586 347 Gene3D G3DSA:3.20.20.70 1 347 2.8E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_20556 a9998e4676a2c88bb5c79e3e9826f586 347 SUPERFAMILY SSF51395 3 342 3.66E-110 T 14-10-2018 VEJY3_20556 a9998e4676a2c88bb5c79e3e9826f586 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 334 1.7E-85 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEJY3_24141 3d8d7ea1df6f9d34fa9701be3b91cd5c 228 Gene3D G3DSA:3.40.225.10 1 227 1.1E-58 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_24141 3d8d7ea1df6f9d34fa9701be3b91cd5c 228 SUPERFAMILY SSF53639 2 219 3.73E-68 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VEJY3_24141 3d8d7ea1df6f9d34fa9701be3b91cd5c 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 1.0E-45 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_24141 3d8d7ea1df6f9d34fa9701be3b91cd5c 228 SMART SM01007 6 194 2.7E-64 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VEJY3_20001 54fb32f576adfab1315869887844e532 339 Pfam PF03741 Integral membrane protein TerC family 92 293 3.1E-53 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VEJY3_06435 291d983aab92cf085b60b48d65f30701 141 Pfam PF13673 Acetyltransferase (GNAT) domain 38 137 4.5E-14 T 14-10-2018 IPR000182 GNAT domain VEJY3_06435 291d983aab92cf085b60b48d65f30701 141 SUPERFAMILY SSF55729 1 135 2.03E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_06435 291d983aab92cf085b60b48d65f30701 141 Gene3D G3DSA:3.40.630.30 1 140 6.4E-31 T 14-10-2018 VEJY3_14955 ae6f1c7023eb62e8a4a99bad26a5a0d9 206 Pfam PF07947 YhhN family 26 204 1.2E-32 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VEJY3_09440 bc69247bec50b85954c9d38788d8de9b 100 SUPERFAMILY SSF46689 1 62 3.05E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_09440 bc69247bec50b85954c9d38788d8de9b 100 Pfam PF01527 Transposase 2 55 1.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VEJY3_17281 3387cd46e8b015af8bd37b0d9dddceaa 959 SUPERFAMILY SSF48208 247 680 3.4E-37 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEJY3_17281 3387cd46e8b015af8bd37b0d9dddceaa 959 Gene3D G3DSA:1.50.10.10 279 587 6.7E-27 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEJY3_17281 3387cd46e8b015af8bd37b0d9dddceaa 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 505 3.4E-6 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain VEJY3_06605 4aae020e7665c86200fdce9c3e4ac182 172 Gene3D G3DSA:3.10.450.50 1 172 9.8E-56 T 14-10-2018 VEJY3_06605 4aae020e7665c86200fdce9c3e4ac182 172 Pfam PF00866 Ring hydroxylating beta subunit 18 165 2.4E-46 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 VEJY3_06605 4aae020e7665c86200fdce9c3e4ac182 172 SUPERFAMILY SSF54427 4 171 1.83E-41 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_19501 45aef877a0e82503dc696bc6605845e0 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 1.0E-12 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VEJY3_19661 3688199f851fdb66875d5162e321b22b 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.9E-13 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 VEJY3_11650 08a69bbc0a2d8ed51ddd65281e00b6ad 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 2.2E-54 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 VEJY3_11025 19cd67d02d11848927783ce533a2628d 477 Pfam PF03553 Na+/H+ antiporter family 161 453 2.1E-66 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_16111 9877b542aa70191320fd09e87f1c87f6 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 7.7E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEJY3_16111 9877b542aa70191320fd09e87f1c87f6 141 Gene3D G3DSA:3.10.180.10 11 139 1.7E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_16111 9877b542aa70191320fd09e87f1c87f6 141 SUPERFAMILY SSF54593 9 134 1.51E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEJY3_04470 cc4f309c74a6566e69a97a61f52caf63 465 SUPERFAMILY SSF48452 68 259 1.14E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_22131 b6c46c93c8df72eb3f28f41f1c6bedff 463 Pfam PF02321 Outer membrane efflux protein 48 229 6.3E-6 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_22131 b6c46c93c8df72eb3f28f41f1c6bedff 463 Pfam PF02321 Outer membrane efflux protein 270 450 8.4E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_22131 b6c46c93c8df72eb3f28f41f1c6bedff 463 Gene3D G3DSA:1.20.1600.10 38 452 5.0E-40 T 14-10-2018 VEJY3_22131 b6c46c93c8df72eb3f28f41f1c6bedff 463 SUPERFAMILY SSF56954 12 452 3.4E-50 T 14-10-2018 VEJY3_06350 7ec2fa6fb70f1b691bf50fb84ecc1039 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 5.5E-59 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VEJY3_06350 7ec2fa6fb70f1b691bf50fb84ecc1039 177 SUPERFAMILY SSF52540 4 176 1.01E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_06350 7ec2fa6fb70f1b691bf50fb84ecc1039 177 Gene3D G3DSA:3.40.50.300 3 176 1.4E-57 T 14-10-2018 VEJY3_06350 7ec2fa6fb70f1b691bf50fb84ecc1039 177 PIRSF PIRSF006135 1 177 2.8E-53 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VEJY3_21796 61cde3f30aab479e3aa7af315faf8307 112 Gene3D G3DSA:3.30.1360.20 15 111 4.4E-32 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEJY3_21796 61cde3f30aab479e3aa7af315faf8307 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.649 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEJY3_21796 61cde3f30aab479e3aa7af315faf8307 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 1.4E-31 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEJY3_21796 61cde3f30aab479e3aa7af315faf8307 112 SUPERFAMILY SSF55248 16 109 1.44E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEJY3_16426 7f03099a5e78e49c27b3b7c6bc0fbeef 192 Gene3D G3DSA:2.170.170.11 18 134 3.5E-29 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_16426 7f03099a5e78e49c27b3b7c6bc0fbeef 192 SUPERFAMILY SSF51645 4 187 2.75E-25 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEJY3_05730 a5a696fe272bdeaeaf00d7c248a662c5 129 Pfam PF04024 PspC domain 4 62 7.2E-17 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VEJY3_05730 a5a696fe272bdeaeaf00d7c248a662c5 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 4.9E-48 T 14-10-2018 IPR014320 Phage shock protein, PspC VEJY3_13475 560c68e77084dcfffc812a92c795ae82 143 Gene3D G3DSA:2.60.40.3340 15 143 6.8E-41 T 14-10-2018 VEJY3_13475 560c68e77084dcfffc812a92c795ae82 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 5.6E-49 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 VEJY3_10605 c8598bf250c914f07475854383e58c8f 385 Pfam PF01734 Patatin-like phospholipase 30 199 2.5E-18 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEJY3_10605 c8598bf250c914f07475854383e58c8f 385 SUPERFAMILY SSF52151 25 306 2.88E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEJY3_10605 c8598bf250c914f07475854383e58c8f 385 Gene3D G3DSA:3.40.1090.10 16 136 6.1E-10 T 14-10-2018 VEJY3_10605 c8598bf250c914f07475854383e58c8f 385 Gene3D G3DSA:3.40.1090.10 138 262 4.2E-6 T 14-10-2018 VEJY3_20356 5f145dca16b18206f992c07d4540a824 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 2.9E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEJY3_20356 5f145dca16b18206f992c07d4540a824 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 221 6.6E-13 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEJY3_20356 5f145dca16b18206f992c07d4540a824 347 SUPERFAMILY SSF51735 5 204 1.52E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_20356 5f145dca16b18206f992c07d4540a824 347 Gene3D G3DSA:3.30.360.10 128 329 1.1E-121 T 14-10-2018 VEJY3_20356 5f145dca16b18206f992c07d4540a824 347 Gene3D G3DSA:3.40.50.720 6 315 1.1E-121 T 14-10-2018 VEJY3_05880 8e6e5da22300e434971b5a32264eb957 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 1.8E-83 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VEJY3_05795 67468b6fb6576ffee1207a423afa420e 158 Pfam PF05433 Glycine zipper 2TM domain 64 103 2.4E-7 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEJY3_16141 56fea804c6c7770de3ed9f0c8b847e3b 380 SUPERFAMILY SSF46689 322 353 3.27E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEJY3_16141 56fea804c6c7770de3ed9f0c8b847e3b 380 Pfam PF05651 Putative sugar diacid recognition 4 137 2.1E-51 T 14-10-2018 IPR008599 Putative sugar diacid recognition VEJY3_16141 56fea804c6c7770de3ed9f0c8b847e3b 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 9.6E-22 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VEJY3_16141 56fea804c6c7770de3ed9f0c8b847e3b 380 Gene3D G3DSA:1.10.10.2840 252 380 2.3E-23 T 14-10-2018 VEJY3_24361 2ff7539f3b3b18e17edd9d56efdf5813 237 Gene3D G3DSA:3.40.630.10 1 237 2.0E-57 T 14-10-2018 VEJY3_24361 2ff7539f3b3b18e17edd9d56efdf5813 237 Pfam PF00246 Zinc carboxypeptidase 44 157 3.3E-10 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEJY3_24361 2ff7539f3b3b18e17edd9d56efdf5813 237 SUPERFAMILY SSF53187 14 214 1.09E-27 T 14-10-2018 VEJY3_13250 5862e500f02511ed8cfca91412504245 243 Gene3D G3DSA:3.20.20.70 1 243 3.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_13250 5862e500f02511ed8cfca91412504245 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.1E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEJY3_13250 5862e500f02511ed8cfca91412504245 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.688 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEJY3_13250 5862e500f02511ed8cfca91412504245 243 SUPERFAMILY SSF63892 4 242 1.57E-102 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEJY3_15305 33c1e952e6ae502cbb5cfed2c47172df 158 Hamap MF_00598 Protein Smg [smg]. 1 158 32.644 T 14-10-2018 IPR007456 Smg VEJY3_15305 33c1e952e6ae502cbb5cfed2c47172df 158 Pfam PF04361 Protein of unknown function (DUF494) 1 158 4.2E-59 T 14-10-2018 IPR007456 Smg VEJY3_00495 51161bb119758fbaa3cff965dbcfceb2 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VEJY3_00495 51161bb119758fbaa3cff965dbcfceb2 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.583 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VEJY3_00495 51161bb119758fbaa3cff965dbcfceb2 219 SUPERFAMILY SSF52540 6 197 6.53E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_00495 51161bb119758fbaa3cff965dbcfceb2 219 Gene3D G3DSA:3.40.50.300 3 201 1.2E-58 T 14-10-2018 VEJY3_13480 51b851ac5d7280986234070d9f63c9b6 200 SUPERFAMILY SSF52972 1 195 2.3E-74 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_13480 51b851ac5d7280986234070d9f63c9b6 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.019 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VEJY3_13480 51b851ac5d7280986234070d9f63c9b6 200 Gene3D G3DSA:3.90.950.10 1 199 6.6E-83 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEJY3_13480 51b851ac5d7280986234070d9f63c9b6 200 Pfam PF01725 Ham1 family 4 191 6.2E-58 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VEJY3_00775 2f59b8a61dd967d9f9e874031f5f6927 453 PIRSF PIRSF037714 2 453 5.6E-170 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VEJY3_00775 2f59b8a61dd967d9f9e874031f5f6927 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 3.1E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_14660 1d43ec9d8922e6b5f4e9d370615b7259 204 Pfam PF14352 Domain of unknown function (DUF4402) 43 204 2.0E-9 T 14-10-2018 IPR025514 Protein of unknown function DUF4402 VEJY3_18791 aa9e3b62756a03a93a129a5a31f0f94d 299 TIGRFAM TIGR00688 rarD: protein RarD 10 263 1.1E-45 T 14-10-2018 IPR004626 RarD protein GO:0005887 VEJY3_17431 31d7f54ccb8d68996105fb694bfd224c 205 SUPERFAMILY SSF53474 3 176 9.57E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_21366 7a7b0111dfb6299a366a3c74a15bac60 424 Gene3D G3DSA:1.20.1250.20 7 205 9.9E-15 T 14-10-2018 VEJY3_21366 7a7b0111dfb6299a366a3c74a15bac60 424 SUPERFAMILY SSF103473 12 410 1.44E-42 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_21366 7a7b0111dfb6299a366a3c74a15bac60 424 Gene3D G3DSA:1.20.1250.20 217 409 1.3E-16 T 14-10-2018 VEJY3_21366 7a7b0111dfb6299a366a3c74a15bac60 424 Pfam PF07690 Major Facilitator Superfamily 232 404 2.0E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_13575 fbd82b81f5a16d869d966e34a3958e62 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 7.9E-33 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VEJY3_13575 fbd82b81f5a16d869d966e34a3958e62 149 Gene3D G3DSA:3.40.50.10110 1 146 1.8E-43 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VEJY3_13575 fbd82b81f5a16d869d966e34a3958e62 149 SUPERFAMILY SSF102400 1 145 7.32E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VEJY3_00945 13e1bc111db28abdca073db943ff9750 364 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 15 357 4.0E-147 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VEJY3_00945 13e1bc111db28abdca073db943ff9750 364 Gene3D G3DSA:3.40.50.2000 177 359 5.5E-59 T 14-10-2018 VEJY3_00945 13e1bc111db28abdca073db943ff9750 364 Gene3D G3DSA:3.40.50.2000 14 162 5.7E-52 T 14-10-2018 VEJY3_00945 13e1bc111db28abdca073db943ff9750 364 SUPERFAMILY SSF53756 15 356 5.02E-96 T 14-10-2018 VEJY3_00945 13e1bc111db28abdca073db943ff9750 364 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 338 5.0E-69 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VEJY3_21916 4f88f3f380340ad88c044b72e55c512e 210 Gene3D G3DSA:3.40.30.10 25 208 6.8E-39 T 14-10-2018 VEJY3_21916 4f88f3f380340ad88c044b72e55c512e 210 Pfam PF13462 Thioredoxin 51 202 4.6E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold VEJY3_21916 4f88f3f380340ad88c044b72e55c512e 210 SUPERFAMILY SSF52833 28 207 3.74E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_20036 2b8ea233219885f20563bb7d1fa002d7 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.0E-30 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VEJY3_20036 2b8ea233219885f20563bb7d1fa002d7 179 SUPERFAMILY SSF81342 4 175 4.08E-35 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEJY3_18071 78f58518ce19bdff38e41ca1dfe1a2ca 308 Pfam PF03547 Membrane transport protein 161 293 1.6E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEJY3_18071 78f58518ce19bdff38e41ca1dfe1a2ca 308 Pfam PF03547 Membrane transport protein 3 153 4.6E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEJY3_21226 f852b922d8ca4e9273ca5a86faad4a6a 376 Pfam PF01594 AI-2E family transporter 21 349 1.5E-23 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 165 16.716 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 1.1E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 1.1E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 1.1E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_02415 d2303ecc292e41fe7eaac24c5c7286dd 166 Pfam PF01252 Signal peptidase (SPase) II 17 159 2.6E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEJY3_16471 234cdeddff372265d83b0a9f75c62473 134 Gene3D G3DSA:3.10.450.50 2 124 1.8E-10 T 14-10-2018 VEJY3_16471 234cdeddff372265d83b0a9f75c62473 134 SUPERFAMILY SSF54427 7 124 2.18E-14 T 14-10-2018 IPR032710 NTF2-like domain superfamily VEJY3_11055 9e1a3652f55a340b5e81b29f46be80f2 294 Gene3D G3DSA:3.40.50.1980 15 122 8.7E-25 T 14-10-2018 VEJY3_11055 9e1a3652f55a340b5e81b29f46be80f2 294 Pfam PF01497 Periplasmic binding protein 37 259 8.2E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VEJY3_11055 9e1a3652f55a340b5e81b29f46be80f2 294 SUPERFAMILY SSF53807 33 287 2.62E-54 T 14-10-2018 VEJY3_11055 9e1a3652f55a340b5e81b29f46be80f2 294 Gene3D G3DSA:3.40.50.1980 124 293 2.7E-45 T 14-10-2018 VEJY3_01170 0f91c01757c4f77cd7b2ece215ba4854 334 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 1 321 24.396 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 VEJY3_01170 0f91c01757c4f77cd7b2ece215ba4854 334 Pfam PF00953 Glycosyl transferase family 4 42 200 4.0E-30 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VEJY3_21206 346c199573ad055cc2757371ed6fbeec 117 Pfam PF11225 Protein of unknown function (DUF3024) 58 116 1.7E-18 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 VEJY3_16006 04e3ffe0e75de5382c939b0043797fc4 154 SUPERFAMILY SSF56524 25 153 2.55E-12 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VEJY3_03820 b4e1332d0755e3a63e3d9881de315cca 250 Pfam PF08907 Domain of unknown function (DUF1853) 33 199 2.3E-39 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 VEJY3_16146 cc6bffacd13e5a50e427b087e5e38e39 449 Pfam PF02447 GntP family permease 1 447 3.4E-99 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_22986 a22cb19f7d458088e41e09747ba5ebe8 302 SUPERFAMILY SSF103481 35 138 2.22E-11 T 14-10-2018 VEJY3_22986 a22cb19f7d458088e41e09747ba5ebe8 302 SUPERFAMILY SSF103481 188 283 2.62E-10 T 14-10-2018 VEJY3_22986 a22cb19f7d458088e41e09747ba5ebe8 302 Pfam PF00892 EamA-like transporter family 3 135 2.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_22986 a22cb19f7d458088e41e09747ba5ebe8 302 Pfam PF00892 EamA-like transporter family 151 280 4.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_08875 d8741ffc28a2916daead5faa6af7d7eb 179 Gene3D G3DSA:3.40.50.1240 1 177 2.3E-23 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_08875 d8741ffc28a2916daead5faa6af7d7eb 179 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 159 1.8E-21 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEJY3_08875 d8741ffc28a2916daead5faa6af7d7eb 179 SUPERFAMILY SSF53254 1 163 1.65E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VEJY3_02440 3f097618f8116cc2cabadefd4ca46959 494 Pfam PF02554 Carbon starvation protein CstA 4 144 1.4E-32 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VEJY3_02440 3f097618f8116cc2cabadefd4ca46959 494 Pfam PF02554 Carbon starvation protein CstA 156 293 5.7E-20 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VEJY3_02440 3f097618f8116cc2cabadefd4ca46959 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.0E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain VEJY3_12370 77a98b149fc7fc26e8b3647bd4e26f06 584 SUPERFAMILY SSF63829 291 564 1.83E-5 T 14-10-2018 VEJY3_11435 035f71c12faec8cc9687cab1b2fc14d4 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 6.9E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VEJY3_21641 34bf9a051b0998798bb0693f23841efd 89 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 35 84 4.0E-10 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter VEJY3_19601 6b8fc1e4215588bae666b329ef4c4197 63 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 5.2E-21 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 VEJY3_09545 9d34659fd2b758b6647e82fc3e3a1b2e 509 Pfam PF10544 T5orf172 domain 365 456 4.0E-14 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VEJY3_09545 9d34659fd2b758b6647e82fc3e3a1b2e 509 SMART SM00974 375 458 3.9E-31 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VEJY3_09545 9d34659fd2b758b6647e82fc3e3a1b2e 509 Pfam PF13250 Domain of unknown function (DUF4041) 208 260 4.1E-18 T 14-10-2018 IPR025280 Domain of unknown function DUF4041 VEJY3_00155 db9e9206724ad24005db1d4f06a55fbb 175 SUPERFAMILY SSF52218 3 158 2.24E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_00155 db9e9206724ad24005db1d4f06a55fbb 175 Pfam PF12724 Flavodoxin domain 5 153 3.9E-52 T 14-10-2018 IPR026816 Flavodoxin domain VEJY3_00155 db9e9206724ad24005db1d4f06a55fbb 175 Gene3D G3DSA:3.40.50.360 5 116 2.8E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_10280 cb882cfab93ddee7a247df1b0e025246 268 Gene3D G3DSA:3.20.20.70 1 268 5.1E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEJY3_10280 cb882cfab93ddee7a247df1b0e025246 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.784 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_10280 cb882cfab93ddee7a247df1b0e025246 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 4.0E-101 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_10280 cb882cfab93ddee7a247df1b0e025246 268 SUPERFAMILY SSF51366 1 266 3.48E-93 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEJY3_10280 cb882cfab93ddee7a247df1b0e025246 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEJY3_22751 78e4670509276f34e126e2977b6192a4 451 Pfam PF04632 Fusaric acid resistance protein family 9 168 1.4E-29 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEJY3_12235 3181f56c65f9fd9197fe0bea0eac8aa2 446 Pfam PF11973 NQRA C-terminal domain 261 310 6.5E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VEJY3_12235 3181f56c65f9fd9197fe0bea0eac8aa2 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.988 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VEJY3_12235 3181f56c65f9fd9197fe0bea0eac8aa2 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 5.2E-114 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VEJY3_24076 3e25f389be4a582f27cb8944af3e6ff9 331 Gene3D G3DSA:1.10.3720.10 91 330 2.3E-11 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_24076 3e25f389be4a582f27cb8944af3e6ff9 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 328 2.7E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_24076 3e25f389be4a582f27cb8944af3e6ff9 331 SUPERFAMILY SSF161098 97 316 3.27E-8 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_20716 a44b4d98458af0cc2523d6a86f3c8c89 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 1.3E-105 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEJY3_20716 a44b4d98458af0cc2523d6a86f3c8c89 454 Pfam PF02386 Cation transport protein 48 436 9.3E-58 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEJY3_06175 1e684eb333e5af3dfc7a2e88105bf530 275 Pfam PF11383 Protein of unknown function (DUF3187) 1 269 1.1E-102 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 VEJY3_01005 c587c9ae8e01dd8a7ea86a9dfa9abefa 293 Gene3D G3DSA:3.90.25.10 160 285 4.3E-103 T 14-10-2018 VEJY3_01005 c587c9ae8e01dd8a7ea86a9dfa9abefa 293 SUPERFAMILY SSF51735 1 289 1.7E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_01005 c587c9ae8e01dd8a7ea86a9dfa9abefa 293 Pfam PF04321 RmlD substrate binding domain 1 288 4.4E-102 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VEJY3_01005 c587c9ae8e01dd8a7ea86a9dfa9abefa 293 Gene3D G3DSA:3.40.50.720 3 279 4.3E-103 T 14-10-2018 VEJY3_21416 a1a38fc831d508acbebe65c82445a22b 239 Gene3D G3DSA:1.20.1290.10 14 239 1.8E-51 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_21416 a1a38fc831d508acbebe65c82445a22b 239 SUPERFAMILY SSF69118 33 238 1.44E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEJY3_21416 a1a38fc831d508acbebe65c82445a22b 239 Pfam PF02627 Carboxymuconolactone decarboxylase family 31 94 6.1E-6 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_21416 a1a38fc831d508acbebe65c82445a22b 239 Pfam PF02627 Carboxymuconolactone decarboxylase family 151 235 5.3E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEJY3_18291 0f10fdd138c7f91ff0ed19dae5e36ce1 484 PIRSF PIRSF002746 1 448 3.3E-117 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_18291 0f10fdd138c7f91ff0ed19dae5e36ce1 484 Pfam PF02447 GntP family permease 5 446 2.8E-104 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEJY3_21696 60e724ce0de069456957ced85f4de4c3 325 Gene3D G3DSA:3.20.20.140 1 325 2.5E-125 T 14-10-2018 VEJY3_21696 60e724ce0de069456957ced85f4de4c3 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 23 320 8.8E-95 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 VEJY3_21696 60e724ce0de069456957ced85f4de4c3 325 SUPERFAMILY SSF51556 6 324 1.94E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_24176 2df87508850f0ad5e060e0eaa17f425c 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 151 320 2.1E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_24176 2df87508850f0ad5e060e0eaa17f425c 326 SUPERFAMILY SSF161098 130 313 9.81E-33 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_24176 2df87508850f0ad5e060e0eaa17f425c 326 Gene3D G3DSA:1.10.3720.10 126 321 5.0E-26 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_21251 ea60a54b59e4d536ea88685abbc380c8 336 Pfam PF11168 Protein of unknown function (DUF2955) 10 147 1.5E-20 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VEJY3_11895 c0a015478371ac1841cae8964896831d 399 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 248 8.8E-64 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 Gene3D G3DSA:2.60.200.40 101 261 5.5E-78 T 14-10-2018 VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 Gene3D G3DSA:3.40.50.10330 3 263 5.5E-78 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 269 2.3E-62 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 103 1.6E-24 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 SUPERFAMILY SSF111331 4 273 3.71E-72 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VEJY3_19076 4739d5819f9cf9783e5a68365bbb2372 279 SMART SM00046 3 108 1.3E-5 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEJY3_21896 bce06530f39062bddd790aea8fe11fdb 181 Pfam PF07152 YaeQ protein 1 171 1.7E-64 T 14-10-2018 IPR009822 YaeQ VEJY3_21896 bce06530f39062bddd790aea8fe11fdb 181 SUPERFAMILY SSF52980 2 177 7.51E-62 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEJY3_21896 bce06530f39062bddd790aea8fe11fdb 181 SMART SM01322 1 174 5.8E-94 T 14-10-2018 IPR009822 YaeQ VEJY3_21896 bce06530f39062bddd790aea8fe11fdb 181 PIRSF PIRSF011484 1 179 8.2E-63 T 14-10-2018 IPR009822 YaeQ VEJY3_21896 bce06530f39062bddd790aea8fe11fdb 181 Gene3D G3DSA:3.10.640.10 1 179 3.0E-64 T 14-10-2018 IPR038590 YaeQ superfamily VEJY3_20511 954f68fc6876361444bcee39c9afab79 504 Gene3D G3DSA:1.10.606.10 181 502 3.8E-51 T 14-10-2018 IPR016119 Bromoperoxidase/chloroperoxidase C-terminal GO:0004601|GO:0055114 VEJY3_20511 954f68fc6876361444bcee39c9afab79 504 SUPERFAMILY SSF48317 58 492 1.31E-32 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEJY3_21111 decb5d2e740da2759a27358052230d8b 462 Pfam PF03432 Relaxase/Mobilisation nuclease domain 34 272 1.1E-20 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 VEJY3_18211 11b8efd6114b02519d7c4069363c7bf0 94 Pfam PF13670 Peptidase propeptide and YPEB domain 9 91 2.0E-24 T 14-10-2018 IPR025711 PepSY domain VEJY3_21311 32f51ec98442680f0800afc5ded5535e 389 Pfam PF13265 Protein of unknown function (DUF4056) 30 296 2.1E-114 T 14-10-2018 IPR025130 Protein of unknown function DUF4056 VEJY3_23636 551246aace905a54fd58a4caa44753b9 72 Gene3D G3DSA:1.10.720.30 14 71 5.4E-30 T 14-10-2018 IPR036361 SAP domain superfamily VEJY3_23636 551246aace905a54fd58a4caa44753b9 72 Pfam PF09905 DNA-binding protein VF530 6 68 1.1E-34 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VEJY3_00395 4be6f897440fc842eef37d7e61667d11 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 94 7.3E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEJY3_00395 4be6f897440fc842eef37d7e61667d11 176 SUPERFAMILY SSF50475 8 154 4.49E-31 T 14-10-2018 VEJY3_00395 4be6f897440fc842eef37d7e61667d11 176 PIRSF PIRSF004633 1 173 4.4E-52 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VEJY3_00395 4be6f897440fc842eef37d7e61667d11 176 Gene3D G3DSA:2.30.110.10 5 175 9.6E-52 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_19061 ed473fc8f0882bf95a7e7598b2ad07f7 576 SUPERFAMILY SSF53300 99 272 1.24E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_19061 ed473fc8f0882bf95a7e7598b2ad07f7 576 Pfam PF13519 von Willebrand factor type A domain 102 207 9.4E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A VEJY3_19061 ed473fc8f0882bf95a7e7598b2ad07f7 576 Gene3D G3DSA:3.40.50.410 97 281 6.1E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 Gene3D G3DSA:3.30.420.40 142 255 1.8E-92 T 14-10-2018 VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 SUPERFAMILY SSF53067 30 135 8.87E-14 T 14-10-2018 VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 SUPERFAMILY SSF53067 142 271 1.54E-22 T 14-10-2018 VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 Pfam PF06723 MreB/Mbl protein 62 174 3.1E-9 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 Gene3D G3DSA:3.30.420.40 29 269 1.8E-92 T 14-10-2018 VEJY3_08485 74577d5c2126ee775969f59f55d6f675 273 SMART SM00842 30 136 0.0059 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEJY3_19236 3c463546ec4b7a1d5922c628e31302ef 91 Pfam PF03206 Nitrogen fixation protein NifW 8 72 2.6E-6 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 VEJY3_21246 ffb4c85afe6bc11f719e2a26cd05ec27 287 SUPERFAMILY SSF53613 1 260 1.56E-46 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_21246 ffb4c85afe6bc11f719e2a26cd05ec27 287 Pfam PF08543 Phosphomethylpyrimidine kinase 93 258 9.8E-14 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEJY3_21246 ffb4c85afe6bc11f719e2a26cd05ec27 287 Gene3D G3DSA:3.40.1190.20 1 286 3.7E-58 T 14-10-2018 IPR029056 Ribokinase-like VEJY3_04550 4809508331ef3c1ca48fa8f658631580 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 9.2E-114 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VEJY3_04550 4809508331ef3c1ca48fa8f658631580 335 SUPERFAMILY SSF52540 50 161 2.56E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_04550 4809508331ef3c1ca48fa8f658631580 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.506 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VEJY3_21776 54f4c03876ee53503c2bb787e9caba96 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-12 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VEJY3_21776 54f4c03876ee53503c2bb787e9caba96 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.1E-30 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VEJY3_15425 23b9e52f3957aaa2549a14c6895bdbaa 399 Pfam PF07690 Major Facilitator Superfamily 12 339 8.3E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEJY3_15425 23b9e52f3957aaa2549a14c6895bdbaa 399 SUPERFAMILY SSF103473 5 379 2.35E-50 T 14-10-2018 IPR036259 MFS transporter superfamily VEJY3_15425 23b9e52f3957aaa2549a14c6895bdbaa 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 369 1.2E-81 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEJY3_15425 23b9e52f3957aaa2549a14c6895bdbaa 399 Gene3D G3DSA:1.20.1720.10 8 378 8.9E-72 T 14-10-2018 VEJY3_04015 77bc13623f714a11f56b6a1d0aab7c61 294 Gene3D G3DSA:1.10.443.10 129 293 1.8E-28 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEJY3_04015 77bc13623f714a11f56b6a1d0aab7c61 294 SUPERFAMILY SSF56349 26 291 4.12E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEJY3_04015 77bc13623f714a11f56b6a1d0aab7c61 294 Pfam PF00589 Phage integrase family 132 285 4.4E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEJY3_03145 1ee8a3a8eb51164362e6b7a9f2a39e14 151 SUPERFAMILY SSF48013 3 149 7.85E-39 T 14-10-2018 IPR035926 NusB-like superfamily VEJY3_03145 1ee8a3a8eb51164362e6b7a9f2a39e14 151 Gene3D G3DSA:1.10.940.10 1 151 2.0E-47 T 14-10-2018 IPR035926 NusB-like superfamily VEJY3_03145 1ee8a3a8eb51164362e6b7a9f2a39e14 151 Pfam PF01029 NusB family 7 145 4.3E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VEJY3_03145 1ee8a3a8eb51164362e6b7a9f2a39e14 151 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 149 23.108 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VEJY3_07885 7e34ab54158dd189ed8572c1d230828a 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 3.0E-39 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_19171 177f7507fbfc23b6be6d4d9b02c0de69 104 Pfam PF01627 Hpt domain 2 70 1.7E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEJY3_19171 177f7507fbfc23b6be6d4d9b02c0de69 104 Gene3D G3DSA:1.20.120.160 1 94 2.5E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_19171 177f7507fbfc23b6be6d4d9b02c0de69 104 SUPERFAMILY SSF47226 2 88 1.44E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEJY3_12525 34f6886ddce1062e7d86a2d83a4c6518 160 Pfam PF01478 Type IV leader peptidase family 4 108 4.6E-13 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VEJY3_02670 95b859d009d037485d5a308f68439751 436 SUPERFAMILY SSF51621 6 436 7.63E-153 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEJY3_02670 95b859d009d037485d5a308f68439751 436 PIRSF PIRSF001362 1 436 1.2E-223 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEJY3_02670 95b859d009d037485d5a308f68439751 436 Gene3D G3DSA:3.20.20.60 1 419 4.3E-182 T 14-10-2018 VEJY3_02670 95b859d009d037485d5a308f68439751 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VEJY3_02670 95b859d009d037485d5a308f68439751 436 Pfam PF00463 Isocitrate lyase family 14 257 1.2E-61 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEJY3_02670 95b859d009d037485d5a308f68439751 436 Pfam PF00463 Isocitrate lyase family 258 436 4.9E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEJY3_00710 150d29d141951742fa9de3251af6af05 99 Pfam PF06476 Protein of unknown function (DUF1090) 16 84 1.0E-14 T 14-10-2018 IPR009468 Protein of unknown function DUF1090 VEJY3_23491 633f005dfe6fc371959e92f1ae03522e 145 Pfam PF12975 Domain of unknown function (DUF3859) 6 131 2.4E-37 T 14-10-2018 IPR024331 Domain of unknown function DUF3859 VEJY3_23491 633f005dfe6fc371959e92f1ae03522e 145 Gene3D G3DSA:2.60.40.2390 24 132 8.2E-6 T 14-10-2018 VEJY3_17526 93d7d4a382d5b910cdd73d847e9de96d 104 SMART SM00465 8 86 2.8E-7 T 14-10-2018 IPR000305 GIY-YIG endonuclease VEJY3_17526 93d7d4a382d5b910cdd73d847e9de96d 104 Gene3D G3DSA:3.40.1440.10 4 99 1.2E-27 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEJY3_17526 93d7d4a382d5b910cdd73d847e9de96d 104 SUPERFAMILY SSF82771 8 79 3.53E-14 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEJY3_17526 93d7d4a382d5b910cdd73d847e9de96d 104 Pfam PF01541 GIY-YIG catalytic domain 9 78 1.8E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease VEJY3_10045 4de95bc4b29f262ffabe29dcef0c28fd 162 SUPERFAMILY SSF46785 4 141 4.36E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEJY3_10045 4de95bc4b29f262ffabe29dcef0c28fd 162 SMART SM00347 24 124 6.0E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_10045 4de95bc4b29f262ffabe29dcef0c28fd 162 Pfam PF01047 MarR family 31 89 2.8E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEJY3_10045 4de95bc4b29f262ffabe29dcef0c28fd 162 Gene3D G3DSA:1.10.10.10 1 140 2.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Pfam PF01743 Poly A polymerase head domain 54 184 8.8E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 SUPERFAMILY SSF81891 182 419 1.44E-47 T 14-10-2018 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Pfam PF12626 Polymerase A arginine-rich C-terminus 331 447 3.2E-38 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Gene3D G3DSA:1.10.3090.10 182 432 2.2E-93 T 14-10-2018 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Gene3D G3DSA:3.30.460.10 20 180 2.1E-63 T 14-10-2018 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 271 2.8E-20 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 SUPERFAMILY SSF81301 26 181 4.36E-40 T 14-10-2018 VEJY3_12945 3087d4306f636ab0d710a45733561542 454 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 10 453 37.841 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VEJY3_16756 22dd06ef02ed2413edf02f518d16deda 172 Pfam PF05433 Glycine zipper 2TM domain 68 108 5.9E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEJY3_15886 a41dc0c111e6c68f2b64a24750490a54 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 4.7E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 VEJY3_10745 fbd62a2de88e4d31a996dd06f566ae41 691 Pfam PF05170 AsmA family 2 582 2.4E-116 T 14-10-2018 IPR007844 AsmA VEJY3_14875 bad3ed9f0328bb0643cfeb38752a038f 447 Pfam PF01554 MatE 24 184 6.8E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_14875 bad3ed9f0328bb0643cfeb38752a038f 447 Pfam PF01554 MatE 250 399 2.2E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_22291 58e3afec86ed65ccf07746884ab47e54 338 Gene3D G3DSA:3.40.190.170 35 338 2.6E-78 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_22291 58e3afec86ed65ccf07746884ab47e54 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 322 3.3E-43 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_16481 9f0514b86ce46eba0982f7ee575f31c5 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 273 6.6E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_19241 4b60b4b6b340ad6fcf25e92dd4f3b84a 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 30 127 9.2E-10 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VEJY3_19241 4b60b4b6b340ad6fcf25e92dd4f3b84a 141 Pfam PF03061 Thioesterase superfamily 57 112 3.8E-7 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_19241 4b60b4b6b340ad6fcf25e92dd4f3b84a 141 SUPERFAMILY SSF54637 12 137 2.38E-21 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_19241 4b60b4b6b340ad6fcf25e92dd4f3b84a 141 Gene3D G3DSA:3.10.129.10 5 141 1.4E-24 T 14-10-2018 VEJY3_09695 43813873c94b265301c4ef0932a6542b 162 Pfam PF08875 Domain of unknown function (DUF1833) 5 150 5.9E-20 T 14-10-2018 IPR014974 Domain of unknown function DUF1833 VEJY3_08225 af59b669cbe44d4b7951f711af0dfad1 158 SUPERFAMILY SSF53850 35 156 8.32E-8 T 14-10-2018 VEJY3_08225 af59b669cbe44d4b7951f711af0dfad1 158 Gene3D G3DSA:3.40.190.10 39 158 5.9E-5 T 14-10-2018 VEJY3_04435 52f5ff0e2be39cc6d14c61a3aba8679d 539 Gene3D G3DSA:3.30.70.2700 1 81 1.7E-33 T 14-10-2018 VEJY3_04435 52f5ff0e2be39cc6d14c61a3aba8679d 539 SUPERFAMILY SSF51905 101 531 8.64E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04435 52f5ff0e2be39cc6d14c61a3aba8679d 539 Gene3D G3DSA:3.50.50.60 473 534 8.2E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04435 52f5ff0e2be39cc6d14c61a3aba8679d 539 Gene3D G3DSA:3.50.50.60 86 305 2.2E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEJY3_04435 52f5ff0e2be39cc6d14c61a3aba8679d 539 PIRSF PIRSF038984 1 536 5.6E-238 T 14-10-2018 IPR028348 FAD dependent protein VEJY3_06850 fe0fee5ad02e2bfd28232b2dc6832795 361 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 39 353 5.3E-134 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC VEJY3_06850 fe0fee5ad02e2bfd28232b2dc6832795 361 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 342 3.1E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_01900 8ff3ca13ec48363d1c629b12ecc9cd77 257 Gene3D G3DSA:1.20.120.350 11 125 3.1E-14 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily VEJY3_01900 8ff3ca13ec48363d1c629b12ecc9cd77 257 Gene3D G3DSA:1.10.287.70 126 225 1.2E-22 T 14-10-2018 VEJY3_01900 8ff3ca13ec48363d1c629b12ecc9cd77 257 Pfam PF00520 Ion transport protein 44 210 1.3E-15 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VEJY3_01900 8ff3ca13ec48363d1c629b12ecc9cd77 257 SUPERFAMILY SSF81324 11 210 1.07E-44 T 14-10-2018 VEJY3_11670 d67bfe7f3a96a0ff7266e8cdf63b9993 116 SUPERFAMILY SSF52833 2 114 2.76E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VEJY3_11670 d67bfe7f3a96a0ff7266e8cdf63b9993 116 Pfam PF03960 ArsC family 7 112 4.8E-18 T 14-10-2018 IPR006660 Arsenate reductase-like VEJY3_11670 d67bfe7f3a96a0ff7266e8cdf63b9993 116 Gene3D G3DSA:3.40.30.10 2 114 2.2E-42 T 14-10-2018 VEJY3_01025 696c474f4874cc7e7dba4c3ad23743ef 315 SUPERFAMILY SSF53448 3 295 4.97E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_01025 696c474f4874cc7e7dba4c3ad23743ef 315 Pfam PF00535 Glycosyl transferase family 2 9 161 1.6E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEJY3_01025 696c474f4874cc7e7dba4c3ad23743ef 315 Gene3D G3DSA:3.90.550.10 1 256 3.1E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEJY3_17666 ce598ee299e8f6924c87b20b0dc2b9c9 287 PIRSF PIRSF028200 12 287 9.6E-90 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VEJY3_17001 93bc47d2bac56c5f656d7a3700e2b5cd 197 Gene3D G3DSA:3.40.50.360 1 189 8.4E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_17001 93bc47d2bac56c5f656d7a3700e2b5cd 197 Pfam PF03358 NADPH-dependent FMN reductase 1 145 2.0E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEJY3_17001 93bc47d2bac56c5f656d7a3700e2b5cd 197 SUPERFAMILY SSF52218 1 171 2.02E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 Gene3D G3DSA:1.10.3860.10 1 422 2.6E-114 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 2.7E-114 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 3.7E-37 T 14-10-2018 VEJY3_02995 1a594c27cbd40a855a6d3e32b60f8a21 424 SUPERFAMILY SSF118215 5 406 1.44E-105 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEJY3_09690 ba9c32c9e01eca556a1190fc6240f84d 140 Pfam PF00877 NlpC/P60 family 13 112 8.5E-6 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VEJY3_09690 ba9c32c9e01eca556a1190fc6240f84d 140 Gene3D G3DSA:3.90.1720.10 2 130 2.1E-12 T 14-10-2018 VEJY3_09690 ba9c32c9e01eca556a1190fc6240f84d 140 SUPERFAMILY SSF54001 8 113 2.26E-11 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEJY3_05655 535b6a92ccc2ae243b5ae6b384102743 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 10 55 1.9E-24 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VEJY3_02375 5a265290f6ec45d064d86883adec6c11 380 Pfam PF08014 Domain of unknown function (DUF1704) 42 378 2.0E-112 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VEJY3_02375 5a265290f6ec45d064d86883adec6c11 380 SMART SM01154 41 380 2.1E-150 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VEJY3_20806 cf3f780746df20bfb7ab15d361faf472 144 Pfam PF13673 Acetyltransferase (GNAT) domain 32 129 1.8E-14 T 14-10-2018 IPR000182 GNAT domain VEJY3_20806 cf3f780746df20bfb7ab15d361faf472 144 SUPERFAMILY SSF55729 3 135 1.15E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEJY3_20806 cf3f780746df20bfb7ab15d361faf472 144 Gene3D G3DSA:3.40.630.30 2 137 5.9E-36 T 14-10-2018 VEJY3_03120 335303e7d598f6af3572787ffb110aa4 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.883 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VEJY3_03120 335303e7d598f6af3572787ffb110aa4 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEJY3_09845 960db88812b923bd62d5294395157223 232 Pfam PF03374 Phage antirepressor protein KilAC domain 120 222 2.0E-26 T 14-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 VEJY3_09845 960db88812b923bd62d5294395157223 232 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 12 91 1.5E-14 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family VEJY3_18221 a56d748b12defbc3ae3d68aff61faff5 158 Gene3D G3DSA:3.10.129.10 2 154 9.7E-38 T 14-10-2018 VEJY3_18221 a56d748b12defbc3ae3d68aff61faff5 158 SUPERFAMILY SSF54637 10 147 9.68E-31 T 14-10-2018 IPR029069 HotDog domain superfamily VEJY3_18221 a56d748b12defbc3ae3d68aff61faff5 158 Pfam PF03061 Thioesterase superfamily 57 138 6.5E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEJY3_02730 06b143f3f2740496d0525d131634581e 127 Gene3D G3DSA:3.90.1010.10 1 127 4.9E-59 T 14-10-2018 VEJY3_02730 06b143f3f2740496d0525d131634581e 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VEJY3_02730 06b143f3f2740496d0525d131634581e 127 SUPERFAMILY SSF82649 1 125 7.33E-48 T 14-10-2018 VEJY3_02365 39e74c7588b0b0c009963f07f1618681 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.0E-84 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEJY3_02365 39e74c7588b0b0c009963f07f1618681 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.221 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEJY3_02365 39e74c7588b0b0c009963f07f1618681 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEJY3_05650 53b956b2f168463589854aa937350c66 267 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 246 7.7E-73 T 14-10-2018 IPR005226 UPF0014 family VEJY3_17596 59553e195d81d3cd8e1722b6ea4a4f2e 206 PIRSF PIRSF006324 1 206 7.4E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_17596 59553e195d81d3cd8e1722b6ea4a4f2e 206 Pfam PF01810 LysE type translocator 15 205 1.0E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_09230 85876541f05c6db6b9c740fdf2dceb9a 448 Pfam PF08388 Group II intron, maturase-specific domain 319 376 2.8E-7 T 14-10-2018 IPR013597 Group II intron, maturase-specific VEJY3_09230 85876541f05c6db6b9c740fdf2dceb9a 448 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 36 282 1.8E-39 T 14-10-2018 IPR000477 Reverse transcriptase domain VEJY3_09230 85876541f05c6db6b9c740fdf2dceb9a 448 SUPERFAMILY SSF56672 2 290 4.6E-49 T 14-10-2018 VEJY3_07875 bd6c0f5179c4762cfc78a03641d02c70 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 8.7E-15 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 VEJY3_06540 f205b171c6730853a5fb9b29fe6bb439 205 PIRSF PIRSF006324 1 204 2.1E-44 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_06540 f205b171c6730853a5fb9b29fe6bb439 205 Pfam PF01810 LysE type translocator 16 202 2.2E-27 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_18931 75d81802ec3c103e822fd04de3990d9e 215 Pfam PF13645 L,D-transpeptidase catalytic domain 52 213 4.2E-65 T 14-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase VEJY3_16261 2b6ba0cf86b4b4d1031cb6503cbaba5a 236 SUPERFAMILY SSF51695 3 234 1.95E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEJY3_16261 2b6ba0cf86b4b4d1031cb6503cbaba5a 236 Gene3D G3DSA:3.20.20.190 1 235 3.8E-65 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEJY3_16261 2b6ba0cf86b4b4d1031cb6503cbaba5a 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 9.1E-35 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VEJY3_08945 cc38627ae5eef418f1728d9d2f4386fa 156 SUPERFAMILY SSF143744 12 149 2.22E-25 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_08945 cc38627ae5eef418f1728d9d2f4386fa 156 Gene3D G3DSA:3.30.450.150 1 156 3.7E-55 T 14-10-2018 IPR038084 GlcG-like domain superfamily VEJY3_08945 cc38627ae5eef418f1728d9d2f4386fa 156 Hamap MF_00761 UPF0303 protein . 2 153 30.508 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 VEJY3_08945 cc38627ae5eef418f1728d9d2f4386fa 156 PIRSF PIRSF008757 1 156 5.0E-59 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 VEJY3_08945 cc38627ae5eef418f1728d9d2f4386fa 156 Pfam PF03928 Haem-degrading 20 146 1.3E-29 T 14-10-2018 IPR005624 Haem-degrading VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 Pfam PF00850 Histone deacetylase domain 30 285 7.4E-51 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 Gene3D G3DSA:3.40.800.20 2 298 2.1E-66 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 SUPERFAMILY SSF52768 3 285 2.06E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 1.0E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.0E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_11105 09161d01a703facf97ad749b7310f1b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.0E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEJY3_15385 c4a206ecd1e7196648ca2f06c30dc5c1 292 Pfam PF01553 Acyltransferase 73 226 7.9E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_15385 c4a206ecd1e7196648ca2f06c30dc5c1 292 SUPERFAMILY SSF69593 65 290 4.84E-26 T 14-10-2018 VEJY3_15385 c4a206ecd1e7196648ca2f06c30dc5c1 292 SMART SM00563 85 227 1.3E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEJY3_23776 defc85816967b377f8d1ac20fbf55df6 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 1.9E-42 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VEJY3_09180 cbaca9c7390b85174d15fb2acdbb5943 253 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 73 169 1.9E-19 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VEJY3_02380 377324afabcc2cf166f2fd4e393e4ec8 382 Pfam PF02690 Na+/Pi-cotransporter 218 335 7.3E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VEJY3_02380 377324afabcc2cf166f2fd4e393e4ec8 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 1.1E-22 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VEJY3_18516 a506bed129fb833ced49e93ba2280b7c 633 Pfam PF04632 Fusaric acid resistance protein family 14 600 2.7E-103 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEJY3_23386 4a509de2c0745fe05fe7f73196adb0fd 494 Gene3D G3DSA:1.25.40.10 168 317 5.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23386 4a509de2c0745fe05fe7f73196adb0fd 494 Gene3D G3DSA:1.25.40.10 26 167 1.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_23386 4a509de2c0745fe05fe7f73196adb0fd 494 SUPERFAMILY SSF48452 64 315 5.06E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEJY3_14055 a0d1ccf0f21f44b2a580b3a0e331d403 171 Gene3D G3DSA:2.30.30.830 91 171 2.8E-24 T 14-10-2018 VEJY3_14055 a0d1ccf0f21f44b2a580b3a0e331d403 171 PIRSF PIRSF016481 1 171 2.9E-50 T 14-10-2018 IPR007446 Pilus assembly protein PilP VEJY3_14055 a0d1ccf0f21f44b2a580b3a0e331d403 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 4.4E-40 T 14-10-2018 IPR007446 Pilus assembly protein PilP VEJY3_11225 3ecd7e1a32abf69163fb7bc238db1a13 181 Gene3D G3DSA:3.40.50.2020 1 181 4.1E-66 T 14-10-2018 VEJY3_11225 3ecd7e1a32abf69163fb7bc238db1a13 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.715 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VEJY3_11225 3ecd7e1a32abf69163fb7bc238db1a13 181 SUPERFAMILY SSF53271 11 178 4.04E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VEJY3_11225 3ecd7e1a32abf69163fb7bc238db1a13 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 3.0E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEJY3_17461 d6f13fb1c951ae96bc03472914da0301 223 Gene3D G3DSA:2.30.110.10 2 220 7.8E-63 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEJY3_17461 d6f13fb1c951ae96bc03472914da0301 223 SUPERFAMILY SSF50475 2 184 2.36E-52 T 14-10-2018 VEJY3_17461 d6f13fb1c951ae96bc03472914da0301 223 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 162 7.7E-40 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related VEJY3_12895 1e0799dba119a60219c90ce1545bd5bf 391 Pfam PF05651 Putative sugar diacid recognition 3 136 7.7E-51 T 14-10-2018 IPR008599 Putative sugar diacid recognition VEJY3_12895 1e0799dba119a60219c90ce1545bd5bf 391 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 375 3.0E-18 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VEJY3_12895 1e0799dba119a60219c90ce1545bd5bf 391 Gene3D G3DSA:1.10.10.2840 255 384 1.1E-16 T 14-10-2018 VEJY3_11685 834331e0cea2968a9f61406350a3ff47 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 3.6E-22 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 VEJY3_09700 efd4e04e8b193ef8a9ce7909526d3736 861 SUPERFAMILY SSF52266 354 509 4.4E-5 T 14-10-2018 VEJY3_23221 16d82c90ecd587ef181c441556e54477 564 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 509 4.0E-182 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEJY3_19926 f78730ab08a6ae72d9d78394e624607a 551 SUPERFAMILY SSF52540 227 410 1.43E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_19926 f78730ab08a6ae72d9d78394e624607a 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 5.1E-185 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative VEJY3_21706 c19623ff7cabe762271f8ebdda680b9c 369 Gene3D G3DSA:1.10.10.800 206 297 5.9E-119 T 14-10-2018 VEJY3_21706 c19623ff7cabe762271f8ebdda680b9c 369 SUPERFAMILY SSF53474 50 368 1.5E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_21706 c19623ff7cabe762271f8ebdda680b9c 369 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 79 226 1.7E-7 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VEJY3_21706 c19623ff7cabe762271f8ebdda680b9c 369 Gene3D G3DSA:3.40.50.1820 73 352 5.9E-119 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VEJY3_11455 fa32972a5b02a7f74e32056caa3a474d 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 9.4E-23 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 VEJY3_18831 b1d539c6752c4e76d3f9f0a40de33c87 213 PIRSF PIRSF006324 4 213 1.4E-53 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_18831 b1d539c6752c4e76d3f9f0a40de33c87 213 Pfam PF01810 LysE type translocator 20 211 3.2E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_03465 3d5014538524dec4ca3047a414b3796d 313 Pfam PF01963 TraB family 46 299 4.4E-51 T 14-10-2018 IPR002816 Pheromone shutdown, TraB VEJY3_06730 60f3af5a6e8721160626d13e502e7ef7 243 SUPERFAMILY SSF53681 153 209 7.59E-6 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_06730 60f3af5a6e8721160626d13e502e7ef7 243 Pfam PF01177 Asp/Glu/Hydantoin racemase 50 208 5.0E-13 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEJY3_06730 60f3af5a6e8721160626d13e502e7ef7 243 Gene3D G3DSA:3.40.50.12500 1 243 3.7E-88 T 14-10-2018 VEJY3_06820 eea3b501e45749433acb70099c584131 83 Gene3D G3DSA:3.90.190.10 8 83 6.2E-6 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEJY3_10710 0c8646d92fdca42a593e970f21e6a402 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.7E-16 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VEJY3_20081 93fd9e8e2a3d1546fef2bc5db419a8c8 169 Gene3D G3DSA:3.40.630.30 4 142 1.7E-5 T 14-10-2018 VEJY3_13585 ff388ab0cb02f62a93919d4f6775e8d8 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 8.9E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VEJY3_13585 ff388ab0cb02f62a93919d4f6775e8d8 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 7.0E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VEJY3_02160 a394a7ada4c20170f96a7569df3ec07e 317 Pfam PF03186 CobD/Cbib protein 19 285 2.2E-31 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VEJY3_12230 ce530670fe184a61afac7881820740ca 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 4.1E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEJY3_12230 ce530670fe184a61afac7881820740ca 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.615 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEJY3_12230 ce530670fe184a61afac7881820740ca 414 PIRSF PIRSF016055 1 414 1.9E-200 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEJY3_08410 f0e3fca134eebd3bb9b28cfc2a020937 96 Pfam PF03692 Putative zinc- or iron-chelating domain 15 83 5.7E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VEJY3_19201 d58e1e71744fb7ceddb9a6a5ca06518f 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 467 5.6E-141 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEJY3_19201 d58e1e71744fb7ceddb9a6a5ca06518f 467 PIRSF PIRSF002457 2 467 8.1E-139 T 14-10-2018 IPR030676 Citrate carrier CitT-related VEJY3_06405 d2caf71d8d40272a0657f518020eec31 171 Pfam PF01863 Protein of unknown function DUF45 94 150 5.3E-11 T 14-10-2018 IPR002725 Protein of unknown function DUF45 VEJY3_06405 d2caf71d8d40272a0657f518020eec31 171 Gene3D G3DSA:3.30.2010.10 72 165 1.2E-5 T 14-10-2018 VEJY3_04895 f6ec2d0eccaf55668793f201b16d2de4 528 PIRSF PIRSF006446 338 526 4.2E-34 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEJY3_04895 f6ec2d0eccaf55668793f201b16d2de4 528 PIRSF PIRSF006446 1 331 8.0E-117 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEJY3_04895 f6ec2d0eccaf55668793f201b16d2de4 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.9E-179 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEJY3_13555 a39b5cabd3e228e734effea8227ff082 159 Pfam PF06271 RDD family 9 149 1.6E-20 T 14-10-2018 IPR010432 RDD VEJY3_05110 cda3f7d6bb1c658fe4708cb42b3cb05a 208 Pfam PF01548 Transposase 7 147 4.5E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VEJY3_00990 5c9761e11af928a96791ad1ddf9c4953 335 Pfam PF02706 Chain length determinant protein 24 126 1.4E-18 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VEJY3_23296 90ab476a281dab379e0466981985676a 308 Pfam PF01882 Protein of unknown function DUF58 54 138 2.8E-19 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VEJY3_10510 d229ed46b5dba27997914422874d41d8 574 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 23 237 7.1E-13 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 VEJY3_07115 a74ad16d7fdafa6e8d1dd12247d6ec56 163 Gene3D G3DSA:3.90.1720.10 41 162 7.0E-41 T 14-10-2018 VEJY3_07115 a74ad16d7fdafa6e8d1dd12247d6ec56 163 Pfam PF00877 NlpC/P60 family 56 160 2.4E-31 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VEJY3_07115 a74ad16d7fdafa6e8d1dd12247d6ec56 163 SUPERFAMILY SSF54001 43 161 6.38E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 SUPERFAMILY SSF56655 6 267 9.29E-78 T 14-10-2018 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 Gene3D G3DSA:3.40.190.80 160 263 1.4E-26 T 14-10-2018 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 Pfam PF00459 Inositol monophosphatase family 7 253 2.1E-51 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.262 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 Gene3D G3DSA:3.30.540.10 6 159 4.2E-45 T 14-10-2018 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 7.6E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 7.6E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_00665 82e85424493c3caca5a9f62f6291b3eb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 7.6E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEJY3_08435 b9406024f25310ad1bb9ac32129aa1a0 99 SUPERFAMILY SSF143414 35 93 3.14E-8 T 14-10-2018 IPR037233 CcmK-like superfamily VEJY3_08435 b9406024f25310ad1bb9ac32129aa1a0 99 Pfam PF00936 BMC domain 36 94 1.4E-7 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_08435 b9406024f25310ad1bb9ac32129aa1a0 99 Gene3D G3DSA:3.30.70.1710 1 98 5.8E-33 T 14-10-2018 VEJY3_08435 b9406024f25310ad1bb9ac32129aa1a0 99 SMART SM00877 35 99 0.0041 T 14-10-2018 IPR000249 Microcompartment protein, bacteria VEJY3_22381 9d4b6fcd513fd366eadb5672717a6375 543 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 233 1.0E-14 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like VEJY3_04145 cb08e06d6d61e01e0171f32aa74eda03 415 SUPERFAMILY SSF53850 21 414 2.08E-63 T 14-10-2018 VEJY3_04145 cb08e06d6d61e01e0171f32aa74eda03 415 Pfam PF01547 Bacterial extracellular solute-binding protein 37 320 7.3E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEJY3_04145 cb08e06d6d61e01e0171f32aa74eda03 415 Gene3D G3DSA:3.40.190.10 24 371 1.3E-161 T 14-10-2018 VEJY3_04145 cb08e06d6d61e01e0171f32aa74eda03 415 Gene3D G3DSA:3.40.190.10 139 396 1.3E-161 T 14-10-2018 VEJY3_11230 bd98fe0c22d76066f17b0d0904dbb98a 89 Pfam PF04304 Protein of unknown function (DUF454) 1 77 2.5E-18 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VEJY3_11390 7dc32d555db92d69140dec553709754e 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 237 6.6E-82 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 VEJY3_06120 76fa075a4858f1632bba1e01023e4dfa 226 SUPERFAMILY SSF103039 10 173 8.11E-24 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_06120 76fa075a4858f1632bba1e01023e4dfa 226 Gene3D G3DSA:3.40.1550.10 7 173 5.2E-20 T 14-10-2018 IPR028976 CheC-like superfamily VEJY3_06120 76fa075a4858f1632bba1e01023e4dfa 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 7.1E-116 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 VEJY3_09955 64912e6760b874ab55512377361abf4f 458 Pfam PF04317 YcjX-like family, DUF463 20 457 1.8E-186 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VEJY3_09955 64912e6760b874ab55512377361abf4f 458 PIRSF PIRSF019381 1 458 1.7E-196 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VEJY3_06770 6c00d826da802b00c7bc2e745d83ff77 194 Pfam PF02417 Chromate transporter 7 171 3.9E-37 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEJY3_13645 7e24b6abcef24aa1f33e91ce61d84cce 106 SUPERFAMILY SSF52091 15 98 2.55E-14 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_13645 7e24b6abcef24aa1f33e91ce61d84cce 106 Gene3D G3DSA:3.30.750.24 10 102 1.5E-11 T 14-10-2018 IPR036513 STAS domain superfamily VEJY3_13645 7e24b6abcef24aa1f33e91ce61d84cce 106 Pfam PF13466 STAS domain 15 93 1.4E-18 T 14-10-2018 IPR002645 STAS domain VEJY3_20461 4352f6f3f20ee879d4dc1f9d0474bc48 197 SUPERFAMILY SSF51182 4 194 2.51E-52 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VEJY3_20461 4352f6f3f20ee879d4dc1f9d0474bc48 197 Gene3D G3DSA:1.20.5.440 2 43 4.5E-7 T 14-10-2018 VEJY3_20461 4352f6f3f20ee879d4dc1f9d0474bc48 197 Gene3D G3DSA:2.60.120.10 44 187 3.3E-54 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VEJY3_20461 4352f6f3f20ee879d4dc1f9d0474bc48 197 Pfam PF05995 Cysteine dioxygenase type I 39 158 2.4E-8 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 VEJY3_20326 0823cc438a057257d9505baf59828491 364 Pfam PF00676 Dehydrogenase E1 component 36 328 6.5E-74 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VEJY3_20326 0823cc438a057257d9505baf59828491 364 Gene3D G3DSA:3.40.50.970 1 351 6.7E-101 T 14-10-2018 VEJY3_20326 0823cc438a057257d9505baf59828491 364 SUPERFAMILY SSF52518 21 357 2.28E-90 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VEJY3_14580 868426db1584c9d39e75354cf534eac8 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 7.4E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VEJY3_14905 0a5a8f13b4fb2c957c8d76bc8324ec37 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.3E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VEJY3_23326 890944f6ff15b032207d829825d6dce7 287 SUPERFAMILY SSF161098 23 274 2.8E-42 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_23326 890944f6ff15b032207d829825d6dce7 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.4E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_23326 890944f6ff15b032207d829825d6dce7 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.4E-99 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VEJY3_23326 890944f6ff15b032207d829825d6dce7 287 Gene3D G3DSA:1.10.3720.10 62 285 1.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_07265 a0e9f8bbc61ca9218220f7725cc25fee 472 Pfam PF01554 MatE 21 181 1.7E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_07265 a0e9f8bbc61ca9218220f7725cc25fee 472 Pfam PF01554 MatE 258 411 4.6E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_07265 a0e9f8bbc61ca9218220f7725cc25fee 472 PIRSF PIRSF006603 1 460 1.7E-73 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEJY3_18336 0b476d0ecd484bccc90945cdf9397b34 252 SUPERFAMILY SSF56300 20 217 3.19E-34 T 14-10-2018 VEJY3_18336 0b476d0ecd484bccc90945cdf9397b34 252 Gene3D G3DSA:3.60.21.10 9 218 2.1E-47 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VEJY3_18336 0b476d0ecd484bccc90945cdf9397b34 252 Pfam PF00149 Calcineurin-like phosphoesterase 22 194 1.2E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEJY3_18501 d9bf83cf107f5a7bc77d425988dfd25e 342 Gene3D G3DSA:3.20.20.210 1 342 6.9E-135 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_18501 d9bf83cf107f5a7bc77d425988dfd25e 342 PIRSF PIRSF005632 1 342 7.2E-195 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VEJY3_18501 d9bf83cf107f5a7bc77d425988dfd25e 342 SUPERFAMILY SSF51726 7 341 2.49E-68 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEJY3_18501 d9bf83cf107f5a7bc77d425988dfd25e 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.8E-35 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEJY3_03020 eb0d4371eca77dcfd332d6f77f9fe3e7 205 PIRSF PIRSF004525 2 102 2.0E-10 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VEJY3_03020 eb0d4371eca77dcfd332d6f77f9fe3e7 205 PIRSF PIRSF004525 117 204 24.0 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VEJY3_04925 f25b1bf1e13d3eaf113f953db0450ecf 147 Gene3D G3DSA:3.30.420.270 63 136 3.5E-16 T 14-10-2018 VEJY3_04925 f25b1bf1e13d3eaf113f953db0450ecf 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 6.3E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEJY3_04925 f25b1bf1e13d3eaf113f953db0450ecf 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.112 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VEJY3_03010 cff7d87d3a838e1490f209764dea26dd 128 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 22 105 8.4E-15 T 14-10-2018 IPR031982 Type IV minor pilin ComP VEJY3_03010 cff7d87d3a838e1490f209764dea26dd 128 Gene3D G3DSA:3.30.700.10 2 127 6.6E-20 T 14-10-2018 VEJY3_03010 cff7d87d3a838e1490f209764dea26dd 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 21 1.7E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_03010 cff7d87d3a838e1490f209764dea26dd 128 SUPERFAMILY SSF54523 1 103 2.62E-18 T 14-10-2018 VEJY3_11565 61f4bebe1b5a2c608e54ab44374215c0 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_11565 61f4bebe1b5a2c608e54ab44374215c0 439 SUPERFAMILY SSF52540 93 362 8.11E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_11565 61f4bebe1b5a2c608e54ab44374215c0 439 Gene3D G3DSA:3.40.50.12240 17 439 3.0E-156 T 14-10-2018 VEJY3_11565 61f4bebe1b5a2c608e54ab44374215c0 439 SMART SM00382 158 342 6.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_11565 61f4bebe1b5a2c608e54ab44374215c0 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 3.5E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEJY3_22941 44f5e5204ff2ea55cb15f9fdbd815def 699 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 440 574 1.1E-7 T 14-10-2018 IPR013398 CRISPR-associated protein Csy2 VEJY3_15255 b7489cf48628e4bbbe6f7782c4e97204 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.042 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VEJY3_15255 b7489cf48628e4bbbe6f7782c4e97204 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 119 1.4E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VEJY3_04540 fb6480af3b61287e7dc391041cf32a67 727 Pfam PF00753 Metallo-beta-lactamase superfamily 479 653 8.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_04540 fb6480af3b61287e7dc391041cf32a67 727 Pfam PF03772 Competence protein 183 449 3.1E-51 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VEJY3_04540 fb6480af3b61287e7dc391041cf32a67 727 Gene3D G3DSA:3.60.15.10 469 710 2.9E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_04540 fb6480af3b61287e7dc391041cf32a67 727 SMART SM00849 481 664 2.5E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase VEJY3_04540 fb6480af3b61287e7dc391041cf32a67 727 SUPERFAMILY SSF56281 469 715 1.0E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEJY3_24121 c79c171c5ae43d1d1aacf8387b7c1bfd 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 318 1.2E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_01285 22c01d604ae59875b0ed01f634b949c9 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.998 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEJY3_01285 22c01d604ae59875b0ed01f634b949c9 200 SUPERFAMILY SSF52166 9 199 3.01E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01285 22c01d604ae59875b0ed01f634b949c9 200 Gene3D G3DSA:3.40.1370.10 5 200 4.2E-70 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VEJY3_01285 22c01d604ae59875b0ed01f634b949c9 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.2E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VEJY3_09735 72710766d1d5a515dc07a51facfe23b1 211 PIRSF PIRSF004395 11 210 4.9E-43 T 14-10-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail VEJY3_09735 72710766d1d5a515dc07a51facfe23b1 211 Pfam PF06763 Prophage minor tail protein Z (GPZ) 14 209 9.4E-40 T 14-10-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail VEJY3_19626 969fb1a051776908daa8577c6d54c0a0 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 421 6.9E-57 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 VEJY3_07755 27f7b68c7029050d4ce964df5851151f 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.3E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VEJY3_09770 f1726fa94d3377bd97db69c872da9178 181 Pfam PF07471 Phage DNA packaging protein Nu1 69 163 9.8E-31 T 14-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit VEJY3_16296 3aea368d75110eed4e5fad4ebf56fa4c 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 2.5E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEJY3_00470 3eb26328c9f5b15bcaa5566a263349d1 257 PIRSF PIRSF005902 1 256 9.6E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_00470 3eb26328c9f5b15bcaa5566a263349d1 257 SUPERFAMILY SSF51556 1 253 4.81E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase VEJY3_00470 3eb26328c9f5b15bcaa5566a263349d1 257 Gene3D G3DSA:3.20.20.140 1 257 3.0E-81 T 14-10-2018 VEJY3_00470 3eb26328c9f5b15bcaa5566a263349d1 257 Pfam PF01026 TatD related DNase 2 252 1.7E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 VEJY3_21386 9cf55b02ad41ec94aef04e575aa5e6d4 203 Pfam PF02525 Flavodoxin-like fold 39 195 1.9E-23 T 14-10-2018 IPR003680 Flavodoxin-like fold VEJY3_21386 9cf55b02ad41ec94aef04e575aa5e6d4 203 SUPERFAMILY SSF52218 39 197 1.13E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_21386 9cf55b02ad41ec94aef04e575aa5e6d4 203 Gene3D G3DSA:3.40.50.360 38 203 2.4E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VEJY3_13925 7cbdd4cf158723b90f70048d5f8f6b09 426 Pfam PF00999 Sodium/hydrogen exchanger family 30 390 9.6E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEJY3_15936 393d924ad105288240eeae4a6cbf12cc 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 463 6.6E-180 T 14-10-2018 IPR004672 Na+/H+ antiporter NhaD VEJY3_15936 393d924ad105288240eeae4a6cbf12cc 476 Pfam PF03600 Citrate transporter 45 420 2.8E-55 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VEJY3_14560 3be805388cae4dc7d1e3a933cd9b5e14 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 9.3E-146 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEJY3_14560 3be805388cae4dc7d1e3a933cd9b5e14 435 PIRSF PIRSF004539 1 435 1.1E-177 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.38 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 1.1E-33 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 SUPERFAMILY SSF51735 41 157 6.76E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 4.2E-24 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 1.7E-99 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEJY3_19916 214ed0ec4a5ca6784d05a8a28e9d86ee 399 Gene3D G3DSA:3.40.50.720 1 396 1.2E-166 T 14-10-2018 VEJY3_19051 df4f2e7f4242bc69ef8f5db336331fff 180 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 2.2E-23 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VEJY3_09750 1fa3bee75bac3d234af9f0d19b2a0703 689 SUPERFAMILY SSF52096 36 205 8.15E-33 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEJY3_09750 1fa3bee75bac3d234af9f0d19b2a0703 689 Pfam PF00574 Clp protease 39 200 3.8E-20 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VEJY3_09750 1fa3bee75bac3d234af9f0d19b2a0703 689 Gene3D G3DSA:3.90.226.10 32 214 2.0E-33 T 14-10-2018 VEJY3_14375 bd3f39ac1e615b5c0ddeeb44a41a27c7 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 4.4E-43 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VEJY3_14375 bd3f39ac1e615b5c0ddeeb44a41a27c7 154 Gene3D G3DSA:3.40.50.300 2 153 3.2E-49 T 14-10-2018 VEJY3_14375 bd3f39ac1e615b5c0ddeeb44a41a27c7 154 SUPERFAMILY SSF52540 27 152 1.57E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_08255 b5a2acd33c408c93603f7b8ffd7bac38 288 SUPERFAMILY SSF103481 42 128 3.01E-6 T 14-10-2018 VEJY3_08255 b5a2acd33c408c93603f7b8ffd7bac38 288 Pfam PF00892 EamA-like transporter family 3 126 1.8E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_08255 b5a2acd33c408c93603f7b8ffd7bac38 288 Pfam PF00892 EamA-like transporter family 140 275 5.0E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEJY3_08255 b5a2acd33c408c93603f7b8ffd7bac38 288 SUPERFAMILY SSF103481 197 270 1.96E-7 T 14-10-2018 VEJY3_04965 f0df9a24f263d0180c181aaeffb38bca 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 1.6E-26 T 14-10-2018 IPR009576 Biofilm formation YgiB VEJY3_13905 9dd9960aceee4ac871b864054d970112 553 Pfam PF15864 Protein glycosylation ligase 135 160 8.4E-11 T 14-10-2018 IPR031726 Protein glycosylation ligase domain VEJY3_13905 9dd9960aceee4ac871b864054d970112 553 Pfam PF04932 O-Antigen ligase 182 330 1.8E-14 T 14-10-2018 IPR007016 O-antigen ligase-related VEJY3_13905 9dd9960aceee4ac871b864054d970112 553 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 351 540 7.7E-63 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VEJY3_02805 f96f710fe2c5a948d21f12eae99c40ed 293 SUPERFAMILY SSF55186 121 272 1.06E-13 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEJY3_05380 12afb8d686d71a165a843d6aa386ca10 318 Pfam PF03547 Membrane transport protein 164 307 4.5E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEJY3_23891 d642012a335a485f15197c43ce5cb439 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.6E-24 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VEJY3_23891 d642012a335a485f15197c43ce5cb439 104 SUPERFAMILY SSF103481 4 103 9.02E-17 T 14-10-2018 VEJY3_23891 d642012a335a485f15197c43ce5cb439 104 Gene3D G3DSA:1.10.3730.20 1 104 7.6E-26 T 14-10-2018 VEJY3_15030 7cdf1526a14b40813813f671fddbfcf2 198 SMART SM01144 1 192 7.3E-50 T 14-10-2018 IPR005636 DTW VEJY3_15030 7cdf1526a14b40813813f671fddbfcf2 198 Pfam PF03942 DTW domain 5 183 2.7E-42 T 14-10-2018 IPR005636 DTW VEJY3_21276 c48320f5bc44fa64b109b7f9ef8f0fda 268 Gene3D G3DSA:3.40.50.300 14 267 5.5E-60 T 14-10-2018 VEJY3_21276 c48320f5bc44fa64b109b7f9ef8f0fda 268 Pfam PF00005 ABC transporter 29 178 3.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_21276 c48320f5bc44fa64b109b7f9ef8f0fda 268 SMART SM00382 38 237 8.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_21276 c48320f5bc44fa64b109b7f9ef8f0fda 268 SUPERFAMILY SSF52540 15 251 1.11E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_21276 c48320f5bc44fa64b109b7f9ef8f0fda 268 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_01530 da675480f34538ff4f0af953e60db80f 115 Gene3D G3DSA:3.10.490.10 4 115 2.8E-38 T 14-10-2018 VEJY3_01530 da675480f34538ff4f0af953e60db80f 115 SUPERFAMILY SSF110857 3 114 3.27E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VEJY3_01530 da675480f34538ff4f0af953e60db80f 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.1E-25 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VEJY3_01200 58324b939a8e9fe6e06d6b20e2020486 115 SUPERFAMILY SSF55331 2 115 3.05E-32 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_01200 58324b939a8e9fe6e06d6b20e2020486 115 Gene3D G3DSA:3.30.429.10 1 115 5.9E-31 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VEJY3_10550 44e7d099ae8bce08677c3278445263c8 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.48 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VEJY3_10550 44e7d099ae8bce08677c3278445263c8 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 1.2E-17 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VEJY3_10380 dfc80c9d5bb4b139389840f19a6bce78 180 SUPERFAMILY SSF52499 1 180 3.14E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_10380 dfc80c9d5bb4b139389840f19a6bce78 180 Pfam PF00857 Isochorismatase family 7 155 1.4E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VEJY3_10380 dfc80c9d5bb4b139389840f19a6bce78 180 Gene3D G3DSA:3.40.50.850 1 180 9.5E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEJY3_05675 948a1d0f53137738be658fc39bfe809c 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.5E-155 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VEJY3_17841 92431f08f7a24a7a0990f8c2999c7da3 375 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 9 363 8.5E-71 T 14-10-2018 IPR010640 Low temperature requirement A VEJY3_15931 1252f6fde5911fd3538367db703374dd 131 SUPERFAMILY SSF51316 13 130 2.3E-32 T 14-10-2018 IPR011057 Mss4-like superfamily VEJY3_15931 1252f6fde5911fd3538367db703374dd 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 3.8E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEJY3_15931 1252f6fde5911fd3538367db703374dd 131 Gene3D G3DSA:2.170.150.70 15 131 3.6E-38 T 14-10-2018 VEJY3_21781 ec5af66a60952a92acba432b962f8132 102 Pfam PF14375 Cysteine-rich CWC 53 97 3.8E-7 T 14-10-2018 IPR032720 Cysteine-rich CWC VEJY3_21781 ec5af66a60952a92acba432b962f8132 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 1.7E-14 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VEJY3_11140 7d2432a100102a0c34939328b7871c68 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 3.3E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 VEJY3_01920 f29d5902747a3b7988656e1865a613cb 440 SUPERFAMILY SSF56954 1 428 1.07E-89 T 14-10-2018 VEJY3_01920 f29d5902747a3b7988656e1865a613cb 440 Gene3D G3DSA:1.20.1600.10 23 439 1.1E-118 T 14-10-2018 VEJY3_01920 f29d5902747a3b7988656e1865a613cb 440 Pfam PF02321 Outer membrane efflux protein 25 214 1.5E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_01920 f29d5902747a3b7988656e1865a613cb 440 Pfam PF02321 Outer membrane efflux protein 238 422 6.0E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEJY3_23611 31c1c27b2d3295fc08a26db048ee15f7 228 Pfam PF07885 Ion channel 134 217 1.6E-17 T 14-10-2018 IPR013099 Potassium channel domain VEJY3_23611 31c1c27b2d3295fc08a26db048ee15f7 228 SUPERFAMILY SSF81324 126 220 1.96E-18 T 14-10-2018 VEJY3_23611 31c1c27b2d3295fc08a26db048ee15f7 228 Gene3D G3DSA:1.10.287.70 123 227 5.9E-21 T 14-10-2018 VEJY3_04655 f6c46f6cd64836b39418706b80576070 142 Pfam PF03788 LrgA family 21 114 6.4E-27 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VEJY3_03080 1c19cb7b23d414833b328bcb3175f208 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 1.1E-41 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 VEJY3_14270 2762b9eef64a7392c6087d33d00d47a0 263 Gene3D G3DSA:3.10.180.50 3 239 2.6E-93 T 14-10-2018 VEJY3_14270 2762b9eef64a7392c6087d33d00d47a0 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 1.6E-46 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VEJY3_14270 2762b9eef64a7392c6087d33d00d47a0 263 SMART SM01150 3 262 4.2E-118 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VEJY3_18416 375368e8f3741068928e49ef3daba053 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 1.5E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_20121 76bfee3b64dd685f773aacfbc72eef8b 219 Pfam PF07947 YhhN family 24 204 1.7E-40 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VEJY3_23591 252716cc9bfc20c4bb1dd94c354c34b9 726 Pfam PF04632 Fusaric acid resistance protein family 6 502 4.0E-40 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEJY3_22656 b14d5c901f387292a7ccec97e867c81b 323 Pfam PF02470 MlaD protein 40 137 3.5E-13 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_07335 9f03bde3f5b770251afa886e5c1381ff 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 1.3E-53 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VEJY3_23136 1e434ad70c2577cde6368a3c41c56151 409 Pfam PF04932 O-Antigen ligase 171 329 3.8E-12 T 14-10-2018 IPR007016 O-antigen ligase-related VEJY3_09335 118f123f89ce22bbcfacc36d2d40d486 502 SUPERFAMILY SSF53743 28 342 6.15E-25 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 VEJY3_16206 44aa2c35ed952104dd2abbc2729e2af2 252 SUPERFAMILY SSF52540 7 213 3.75E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_16206 44aa2c35ed952104dd2abbc2729e2af2 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEJY3_16206 44aa2c35ed952104dd2abbc2729e2af2 252 SMART SM00382 34 214 2.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VEJY3_16206 44aa2c35ed952104dd2abbc2729e2af2 252 Gene3D G3DSA:3.40.50.300 6 223 2.2E-57 T 14-10-2018 VEJY3_16206 44aa2c35ed952104dd2abbc2729e2af2 252 Pfam PF00005 ABC transporter 26 167 5.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEJY3_22781 914d7f19fab55ea195be8d677848565d 513 Pfam PF00474 Sodium:solute symporter family 34 424 2.7E-49 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_22781 914d7f19fab55ea195be8d677848565d 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 425 5.2E-74 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_22781 914d7f19fab55ea195be8d677848565d 513 Gene3D G3DSA:1.20.1730.10 22 511 2.8E-106 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_21271 3140b643680340eecbb0207859b67a79 323 Pfam PF02470 MlaD protein 40 137 4.7E-13 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_06890 a3d96b391e3f35915b0f01ab66f3dfdd 220 Pfam PF01730 UreF 37 177 2.1E-35 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VEJY3_06890 a3d96b391e3f35915b0f01ab66f3dfdd 220 PIRSF PIRSF009467 2 220 2.8E-56 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VEJY3_06890 a3d96b391e3f35915b0f01ab66f3dfdd 220 Gene3D G3DSA:1.10.4190.10 1 197 4.4E-52 T 14-10-2018 IPR038277 UreF domain superfamily VEJY3_06890 a3d96b391e3f35915b0f01ab66f3dfdd 220 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 220 30.441 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 VEJY3_15310 b3f64c0af4e12e361db642a7679c40d6 369 SUPERFAMILY SSF102405 83 290 1.05E-41 T 14-10-2018 VEJY3_15310 b3f64c0af4e12e361db642a7679c40d6 369 Pfam PF02481 DNA recombination-mediator protein A 78 280 4.3E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VEJY3_15310 b3f64c0af4e12e361db642a7679c40d6 369 Gene3D G3DSA:3.40.50.450 1 293 2.8E-97 T 14-10-2018 VEJY3_15310 b3f64c0af4e12e361db642a7679c40d6 369 Gene3D G3DSA:1.10.10.10 307 364 1.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEJY3_13100 42fb4353378cf0bd8d64d56169562209 201 SUPERFAMILY SSF53955 14 166 1.13E-21 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VEJY3_13100 42fb4353378cf0bd8d64d56169562209 201 Gene3D G3DSA:1.10.530.10 36 196 1.3E-12 T 14-10-2018 VEJY3_00430 52e8aad2deba4db981a2c840906e9444 510 Pfam PF02646 RmuC family 181 477 2.4E-106 T 14-10-2018 IPR003798 DNA recombination RmuC VEJY3_02890 c16d450306b0514ddabcbf7a584c2eb1 203 Pfam PF09335 SNARE associated Golgi protein 37 157 9.1E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein VEJY3_11570 47fb546a5766f3c25928c1c2191975b6 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 3.4E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEJY3_11570 47fb546a5766f3c25928c1c2191975b6 266 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 3.4E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEJY3_11570 47fb546a5766f3c25928c1c2191975b6 266 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 3.4E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEJY3_11570 47fb546a5766f3c25928c1c2191975b6 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 6.0E-35 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VEJY3_03675 122f6cbcc659ef2c62a13d7bb8e16e62 305 Gene3D G3DSA:3.40.50.720 2 304 6.1E-76 T 14-10-2018 VEJY3_03675 122f6cbcc659ef2c62a13d7bb8e16e62 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 7.6E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEJY3_03675 122f6cbcc659ef2c62a13d7bb8e16e62 305 SUPERFAMILY SSF51735 1 299 4.55E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VEJY3_03675 122f6cbcc659ef2c62a13d7bb8e16e62 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.8E-14 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 VEJY3_21566 b38631bcd90814653c26c470e3d443b1 440 PIRSF PIRSF006066 5 439 2.8E-79 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_21566 b38631bcd90814653c26c470e3d443b1 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 427 1.6E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_00565 bbf4e8b4b85fd07b33896d83a19e7170 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 8.1E-91 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 VEJY3_08085 a678771a3095c0c13f252da110f6ccfa 384 Pfam PF14088 Domain of unknown function (DUF4268) 245 377 1.6E-11 T 14-10-2018 IPR025364 Domain of unknown function DUF4268 VEJY3_10495 8a79fcdc0be27795c675e58e367776e5 439 Pfam PF04403 Paraquat-inducible protein A 262 420 5.0E-54 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEJY3_10495 8a79fcdc0be27795c675e58e367776e5 439 Pfam PF04403 Paraquat-inducible protein A 49 208 5.8E-38 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEJY3_16396 9f0e695a526a662e5fc7cf6c80a89348 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 1.6E-47 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VEJY3_13210 f713318cc5dc76f0cf0a0ce3e06aa009 93 Gene3D G3DSA:1.20.5.400 21 63 1.5E-12 T 14-10-2018 VEJY3_13210 f713318cc5dc76f0cf0a0ce3e06aa009 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.167 T 14-10-2018 IPR023081 Cell division protein FtsB VEJY3_13210 f713318cc5dc76f0cf0a0ce3e06aa009 93 Pfam PF04977 Septum formation initiator 11 89 1.8E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VEJY3_22471 2c88d71a551f0995b816a171831a2234 301 PIRSF PIRSF016660 1 301 1.3E-119 T 14-10-2018 IPR008526 Inner membrane protein YedI VEJY3_22471 2c88d71a551f0995b816a171831a2234 301 Pfam PF05661 Protein of unknown function (DUF808) 4 289 4.5E-114 T 14-10-2018 IPR008526 Inner membrane protein YedI VEJY3_03565 f86103dfb28b41786edbb0809b17e3bd 249 SUPERFAMILY SSF117143 77 207 7.85E-16 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEJY3_03565 f86103dfb28b41786edbb0809b17e3bd 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 7.1E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEJY3_03565 f86103dfb28b41786edbb0809b17e3bd 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 5.8E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEJY3_03565 f86103dfb28b41786edbb0809b17e3bd 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEJY3_18811 92cbafcdd15762c135093d98c0bc6cd7 160 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 5 158 1.8E-51 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VEJY3_18811 92cbafcdd15762c135093d98c0bc6cd7 160 SUPERFAMILY SSF52540 1 158 1.08E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_18811 92cbafcdd15762c135093d98c0bc6cd7 160 Gene3D G3DSA:3.40.50.300 1 160 6.3E-57 T 14-10-2018 VEJY3_18811 92cbafcdd15762c135093d98c0bc6cd7 160 Pfam PF01202 Shikimate kinase 11 158 3.6E-19 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEJY3_03235 af4719be3f7fab1690b961dd7f3804c0 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 2.8E-71 T 14-10-2018 IPR009948 Syd GO:0009898 VEJY3_03235 af4719be3f7fab1690b961dd7f3804c0 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.898 T 14-10-2018 IPR009948 Syd GO:0009898 VEJY3_03235 af4719be3f7fab1690b961dd7f3804c0 181 Gene3D G3DSA:3.40.1580.20 1 181 2.2E-69 T 14-10-2018 IPR038228 Syd superfamily VEJY3_05215 b495d09379474610da4e5c6fcb452a33 179 SUPERFAMILY SSF55166 34 148 1.1E-6 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEJY3_07150 e2c52074470f1b1020295dc34aa52814 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 6.9E-36 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 VEJY3_17146 eab22152e991be6fd73e0ffecfde9442 447 PIRSF PIRSF005348 4 446 1.5E-158 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VEJY3_17146 eab22152e991be6fd73e0ffecfde9442 447 Pfam PF03390 2-hydroxycarboxylate transporter family 24 440 6.4E-149 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VEJY3_18161 70e08c92c24541a225c447feb05ef7a5 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 309 2.0E-42 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEJY3_18161 70e08c92c24541a225c447feb05ef7a5 341 Gene3D G3DSA:3.40.190.170 26 340 1.6E-87 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEJY3_09235 67d4ac02759d0a5fdbebb33f6afe0866 51 Pfam PF13683 Integrase core domain 5 50 1.2E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VEJY3_20976 ec115ab86045fa6ab2d44f3017946bc3 191 Pfam PF11140 Protein of unknown function (DUF2913) 6 184 5.1E-21 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 SUPERFAMILY SSF54523 36 142 2.72E-37 T 14-10-2018 VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 Gene3D G3DSA:3.30.700.10 33 141 4.1E-43 T 14-10-2018 VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 6.5E-42 T 14-10-2018 IPR013545 Type II secretion system protein G VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.5E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_00625 1dcc9e32cf0d29a8632f5e4d773c8d0c 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEJY3_18956 a54450a1d2ea3fbe6428d2997c04c88b 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 6.3E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_14435 c70f1430cdf13f7549c90b21e5b64f09 376 Pfam PF01551 Peptidase family M23 276 369 7.1E-24 T 14-10-2018 IPR016047 Peptidase M23 VEJY3_14435 c70f1430cdf13f7549c90b21e5b64f09 376 Gene3D G3DSA:2.70.70.10 236 375 1.1E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_14435 c70f1430cdf13f7549c90b21e5b64f09 376 SUPERFAMILY SSF51261 142 373 3.24E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif VEJY3_01525 69304ffb6ef145b490b49b4af8b5da19 1296 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 961 1295 7.2E-67 T 14-10-2018 IPR007452 Translocation and assembly module TamB VEJY3_12110 d59189244060cb87b328c4d584619c7b 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 4.1E-30 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 VEJY3_19796 240baa89cffc2f30a1419732fa99ec65 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 1.2E-90 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VEJY3_11740 1f43c07c28bc107947c15e8f28f40172 53 Pfam PF00239 Resolvase, N terminal domain 2 47 1.8E-6 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEJY3_11740 1f43c07c28bc107947c15e8f28f40172 53 Gene3D G3DSA:3.40.50.1390 1 50 2.6E-5 T 14-10-2018 VEJY3_11890 ba2940df57b6f6fd06d7d771bb3b9eac 146 Pfam PF09842 Predicted membrane protein (DUF2069) 20 122 6.9E-34 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VEJY3_00340 56b21c8075c8d96574482d64b2e41ae3 280 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 104 227 4.1E-23 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VEJY3_00340 56b21c8075c8d96574482d64b2e41ae3 280 SMART SM00858 29 97 0.0062 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEJY3_12490 ef044731cfee10dcc28ac7ab01d9664f 171 Pfam PF07811 TadE-like protein 10 52 3.2E-9 T 14-10-2018 IPR012495 TadE-like VEJY3_01705 470e37dba7df12dc1054ee4608c9f6a5 348 Gene3D G3DSA:3.40.50.2000 202 315 1.6E-5 T 14-10-2018 VEJY3_01705 470e37dba7df12dc1054ee4608c9f6a5 348 SUPERFAMILY SSF53756 8 291 4.71E-11 T 14-10-2018 VEJY3_01705 470e37dba7df12dc1054ee4608c9f6a5 348 Pfam PF13528 Glycosyl transferase family 1 1 300 2.1E-38 T 14-10-2018 VEJY3_11900 8a9982031b4d1f2784d0832880e0535b 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEJY3_11900 8a9982031b4d1f2784d0832880e0535b 417 Pfam PF00860 Permease family 3 371 8.7E-92 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEJY3_07010 4ead53587079b1cd0cc901b648d55890 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.4E-54 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 VEJY3_02445 0c0d29867585e74e821ba45e1d704495 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 1.2E-22 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VEJY3_18066 bc47c2f41711053462f86b172725ee05 421 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 410 1.1E-112 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_18066 bc47c2f41711053462f86b172725ee05 421 PIRSF PIRSF006066 2 421 7.0E-142 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEJY3_15350 cbccb93917fc9741427651235ed44780 217 Pfam PF03006 Haemolysin-III related 10 207 2.7E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VEJY3_23876 5b8222aeb6e5e6f9218395d7eb807d45 110 Pfam PF04320 Protein with unknown function (DUF469) 7 107 4.7E-28 T 14-10-2018 IPR007416 Protein of unknown function DUF469 VEJY3_05505 eac2969272c3ee3c39f841505ceaa17e 178 Pfam PF12915 Protein of unknown function (DUF3833) 17 177 3.4E-65 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 VEJY3_20306 e28cdac4740135b4efb2defaed752cf4 157 SUPERFAMILY SSF110087 8 148 2.09E-48 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEJY3_20306 e28cdac4740135b4efb2defaed752cf4 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 1.9E-38 T 14-10-2018 IPR007410 Copper chaperone PCuAC VEJY3_20306 e28cdac4740135b4efb2defaed752cf4 157 Gene3D G3DSA:2.60.40.1890 37 150 2.0E-36 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEJY3_12325 f5190b1e172ba49cd0fd14860298823b 118 Pfam PF11012 Protein of unknown function (DUF2850) 32 109 3.2E-29 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VEJY3_09755 0d47053045a7c12c66849d174ce185af 508 Pfam PF05136 Phage portal protein, lambda family 40 381 2.5E-86 T 14-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 VEJY3_13685 1b4040b50a812a4fccc9bdcb8cbb03ff 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.722 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VEJY3_13685 1b4040b50a812a4fccc9bdcb8cbb03ff 164 Pfam PF03968 OstA-like protein 30 141 3.7E-30 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VEJY3_13685 1b4040b50a812a4fccc9bdcb8cbb03ff 164 Gene3D G3DSA:2.60.450.10 20 157 1.4E-41 T 14-10-2018 VEJY3_06245 a6cde3e85223294f1b8e7770bdf6547a 258 Gene3D G3DSA:3.30.460.10 73 195 1.5E-6 T 14-10-2018 VEJY3_06245 a6cde3e85223294f1b8e7770bdf6547a 258 SUPERFAMILY SSF81301 64 221 6.54E-16 T 14-10-2018 VEJY3_06455 95c7a055656b9a5dbb6b4516c8b8ae58 159 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 87 143 1.6E-16 T 14-10-2018 IPR018637 Domain of unknown function DUF2059 VEJY3_10515 fdcc193d5c6d719eba6eb5303b45b025 222 Pfam PF09335 SNARE associated Golgi protein 62 177 6.1E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein VEJY3_11760 79aae73a56fb5c53725ae34106b418ea 393 Pfam PF14281 PD-(D/E)XK nuclease superfamily 20 166 8.4E-9 T 14-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 VEJY3_09395 a25d3072ebaa465ee209d4725e60f9cc 335 Gene3D G3DSA:3.30.1370.60 70 307 1.1E-107 T 14-10-2018 VEJY3_09395 a25d3072ebaa465ee209d4725e60f9cc 335 Pfam PF02615 Malate/L-lactate dehydrogenase 9 333 2.5E-109 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 VEJY3_09395 a25d3072ebaa465ee209d4725e60f9cc 335 SUPERFAMILY SSF89733 4 334 8.37E-105 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 VEJY3_09395 a25d3072ebaa465ee209d4725e60f9cc 335 Gene3D G3DSA:1.10.1530.10 11 327 1.1E-107 T 14-10-2018 VEJY3_16656 01b79de6fd0c8edb378db592216255a7 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 1.0E-20 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VEJY3_16656 01b79de6fd0c8edb378db592216255a7 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 8.2E-18 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VEJY3_04800 d0fd8e9d34e1a49dbba116d79dac9556 261 Pfam PF02698 DUF218 domain 80 242 4.4E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VEJY3_06015 9e3861e8e9c50d31709d0a86cc7e322a 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 3.7E-36 T 14-10-2018 IPR010352 Protein of unknown function DUF945 VEJY3_06150 5be888dd1f1eafae4c29e2e6f13489d3 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 2.1E-99 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 Pfam PF01578 Cytochrome C assembly protein 15 184 4.3E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_11440 dd57a2223cdb4f21997c888438306cab 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 9.9E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 9.9E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 9.9E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 9.9E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 1.4E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 Pfam PF00209 Sodium:neurotransmitter symporter family 148 446 5.0E-34 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEJY3_05765 e17aa820752d6c3a1b01c4064d597256 475 SUPERFAMILY SSF161070 9 457 4.45E-131 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEJY3_05400 59a73a3119bd95d041a62cb36cd86c65 397 Pfam PF13679 Methyltransferase domain 116 230 1.5E-17 T 14-10-2018 IPR025714 Methyltransferase domain VEJY3_12655 56471ba53ef3d819c4c757dad7586268 292 Pfam PF01136 Peptidase family U32 81 212 1.6E-13 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEJY3_10500 7f11f06a5889d01c793e96c1c60c0df2 548 Pfam PF02470 MlaD protein 43 134 1.2E-9 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_10500 7f11f06a5889d01c793e96c1c60c0df2 548 Pfam PF02470 MlaD protein 160 219 6.2E-7 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_10500 7f11f06a5889d01c793e96c1c60c0df2 548 Pfam PF02470 MlaD protein 287 391 8.2E-13 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_00105 19d265bf0b20b0ae9e560bafd44af602 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.2E-20 T 14-10-2018 IPR001727 Gdt1 family VEJY3_00105 19d265bf0b20b0ae9e560bafd44af602 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.4E-20 T 14-10-2018 IPR001727 Gdt1 family VEJY3_03625 d2c2542e96fd8526be6a5a8e73230147 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 1.9E-40 T 14-10-2018 VEJY3_03625 d2c2542e96fd8526be6a5a8e73230147 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.379 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VEJY3_03200 b014088249d8d733905675f08770e63b 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.6E-29 T 14-10-2018 IPR006696 Protein of unknown function DUF423 VEJY3_06690 826f14b2e5f09455d45c9fe33893904e 147 Pfam PF06841 T4-like virus tail tube protein gp19 9 142 1.8E-39 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 VEJY3_01500 1b3a7cb1f9f00be9d1d1ffc7c7d180bf 107 Pfam PF10795 Protein of unknown function (DUF2607) 7 96 1.1E-27 T 14-10-2018 IPR019731 Protein of unknown function DUF2607 VEJY3_16946 71f51344eb4a77382996c688d470b764 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 5.0E-72 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VEJY3_16946 71f51344eb4a77382996c688d470b764 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.467 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VEJY3_07390 7c85fec1b851aafbc56ddd6f92c3911b 143 Pfam PF12375 Phage protein 55 122 1.2E-22 T 14-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 VEJY3_22346 665091b1f681ce61d1e8a53ee2470773 281 Pfam PF02517 CAAX protease self-immunity 180 268 2.6E-18 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 VEJY3_23051 757018a1341700c5f666760402188442 330 Pfam PF03783 Curli production assembly/transport component CsgG 63 242 4.9E-34 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 2.2E-120 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 SUPERFAMILY SSF160544 250 355 1.09E-39 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 Gene3D G3DSA:3.40.1690.10 218 359 2.5E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.2E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.2E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.2E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.2E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_11515 d3e889f679e0d78a543a3400cd2315fe 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.2E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEJY3_06865 8241d0d56c236056a2f47c4d01094a9e 285 Hamap MF_01384 Urease accessory protein UreD [ureD]. 15 269 24.281 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 VEJY3_06865 8241d0d56c236056a2f47c4d01094a9e 285 Pfam PF01774 UreD urease accessory protein 56 258 2.2E-37 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 VEJY3_08905 0e3375fd1c5ecaad0934e74234b35eed 39 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 7.1E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_10345 dcda20fdfbb414464109eb51ad32334d 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.7E-19 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VEJY3_18776 6ff5e1d853286b03cf38a50eb4d94103 222 Gene3D G3DSA:1.10.3720.10 4 220 1.8E-53 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_18776 6ff5e1d853286b03cf38a50eb4d94103 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 23 221 1.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEJY3_18776 6ff5e1d853286b03cf38a50eb4d94103 222 SUPERFAMILY SSF161098 5 213 1.44E-44 T 14-10-2018 IPR035906 MetI-like superfamily VEJY3_11970 0daac5e76a8a54b3e0663e9f5cc2793a 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.6E-41 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 VEJY3_04910 db1eaa120ed3f9cd83f1e1f3b7e74b21 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 96 2.2E-30 T 14-10-2018 IPR011846 Cyd operon protein YbgE VEJY3_22296 2a1f69b61e72e6a0cfe44ea25d365953 208 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 162 4.4E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_00545 92ee170c81a2d1de08a9e9610828ffcd 193 Pfam PF13511 Domain of unknown function (DUF4124) 9 86 1.5E-8 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 VEJY3_13370 4dc5aa2e3bf161ee78b2e01c4135b2c9 209 Pfam PF01810 LysE type translocator 15 201 4.6E-43 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEJY3_19586 fa9e7134d447de2e5685e58fff0fcc46 162 Pfam PF01936 NYN domain 8 156 9.4E-39 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type VEJY3_19586 fa9e7134d447de2e5685e58fff0fcc46 162 Gene3D G3DSA:3.40.50.1010 1 162 1.1E-62 T 14-10-2018 VEJY3_04665 390f61f90043faf664b4db59cd4927c7 55 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 9.9E-23 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VEJY3_03480 ac6149ddf8054a1dd7f44debe508ab4e 149 Pfam PF04214 Protein of unknown function, DUF 48 118 1.2E-29 T 14-10-2018 IPR007332 Protein of unknown function DUF411 VEJY3_18156 26c2b79bbe7a68943bb75fe23b6547bf 196 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 156 1.4E-18 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_07455 81b0340ec8748160ffc5fc711148dc61 276 Gene3D G3DSA:2.60.120.730 12 146 7.4E-10 T 14-10-2018 VEJY3_10440 cc33352ef8ade4661123849271f5a2e2 314 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 6.7E-71 T 14-10-2018 IPR007296 Domain of unknown function DUF403 VEJY3_23406 7a81f9b76c26bc13066049bcb03e5e7f 182 Gene3D G3DSA:1.10.1760.20 5 174 1.8E-12 T 14-10-2018 VEJY3_23406 7a81f9b76c26bc13066049bcb03e5e7f 182 Pfam PF07155 ECF-type riboflavin transporter, S component 6 171 2.6E-32 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VEJY3_06380 5921e6933cb13b16bca8945aa1c4c511 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 2.2E-7 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VEJY3_08055 54db114f0aeffdb2197c5f107589d1d2 244 Gene3D G3DSA:1.20.5.340 45 148 2.7E-5 T 14-10-2018 VEJY3_19506 f871d4d03e38565862861e4d4135906f 243 Pfam PF03591 AzlC protein 32 171 1.7E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease VEJY3_02140 7f97f61c367174e53427d29031fed22c 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.6E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_05250 f2b43d3eaa7f3cfe3ab5f1fccc477ded 469 Pfam PF03606 C4-dicarboxylate anaerobic carrier 9 464 5.9E-73 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VEJY3_07545 a28e5892c90abe9fdba5e3b339960e41 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 7.4E-42 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 VEJY3_08835 7782ee2cfaf5f5252064a992ef8e33ba 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.9E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_13655 b206b58efe1d1416120dab77184bbe8e 162 Pfam PF02470 MlaD protein 39 118 2.9E-20 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_22501 538f6477d82ce57faf439be45ee38e23 475 Pfam PF03553 Na+/H+ antiporter family 190 474 1.6E-22 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_13465 af12234fd6235fafefa5e56d29fc4f5c 185 Pfam PF02325 YGGT family 109 173 9.5E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VEJY3_13465 af12234fd6235fafefa5e56d29fc4f5c 185 Pfam PF02325 YGGT family 10 77 2.9E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VEJY3_24031 f2f62ac6a118611a866ff974c0c925ee 389 Pfam PF07470 Glycosyl Hydrolase Family 88 53 324 5.8E-28 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 VEJY3_24031 f2f62ac6a118611a866ff974c0c925ee 389 SUPERFAMILY SSF48208 20 389 2.62E-101 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEJY3_24031 f2f62ac6a118611a866ff974c0c925ee 389 Gene3D G3DSA:1.50.10.10 10 389 6.3E-117 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEJY3_19801 cb8f6b2cea6fd7844daa16ae1fd2d7a3 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 291 2.3E-62 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VEJY3_19801 cb8f6b2cea6fd7844daa16ae1fd2d7a3 375 SUPERFAMILY SSF56925 219 344 3.92E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEJY3_04735 aac250a7b1962e8f463c3cfb4b3939f9 158 Pfam PF05433 Glycine zipper 2TM domain 63 100 5.6E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEJY3_18201 649c0c9cb1e24ea171b23d38b6c0c1de 128 Pfam PF03817 Malonate transporter MadL subunit 1 116 1.4E-47 T 14-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 VEJY3_09825 789d1359420a94ecc37b68c22e5eed47 323 Pfam PF06147 Protein of unknown function (DUF968) 125 320 4.7E-66 T 14-10-2018 IPR010373 Protein of unknown function DUF968 VEJY3_06265 07485e3ba86bad4fd8e943b62a8160db 225 Pfam PF04172 LrgB-like family 6 218 2.5E-69 T 14-10-2018 IPR007300 CidB/LrgB family VEJY3_05925 d42800841acc77f9cbbf226c8c69ee00 817 Pfam PF02687 FtsX-like permease family 715 809 1.3E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEJY3_08395 9d7ea3d81af7334ee4b81d99da2da550 192 SUPERFAMILY SSF52317 1 189 1.83E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_08395 9d7ea3d81af7334ee4b81d99da2da550 192 Pfam PF01965 DJ-1/PfpI family 3 168 1.2E-22 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEJY3_08395 9d7ea3d81af7334ee4b81d99da2da550 192 Gene3D G3DSA:3.40.50.880 1 192 4.7E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VEJY3_06385 15475591d5da42d0554c6b8a402d6f51 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 184 4.4E-66 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 VEJY3_13870 8097e96187796e17730a31f5afbab3a8 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 84 3.0E-8 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEJY3_00660 31a638a5183cc95466af5ad0bb3681d0 233 Pfam PF01203 Type II secretion system (T2SS), protein N 17 227 3.5E-57 T 14-10-2018 IPR022792 Type II secretion system, protein N VEJY3_12275 17d407f92cdc2d8c4dbae2cbd865a682 452 Pfam PF14344 Domain of unknown function (DUF4397) 30 153 1.7E-17 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VEJY3_12275 17d407f92cdc2d8c4dbae2cbd865a682 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 232 1.4E-11 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VEJY3_12275 17d407f92cdc2d8c4dbae2cbd865a682 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 3.4E-17 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VEJY3_05285 1274db258c7a3b8b874030aeccdf18b5 360 Pfam PF14281 PD-(D/E)XK nuclease superfamily 25 186 2.0E-12 T 14-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 VEJY3_07710 f61f3a4c57c60775891ebb25c7393bda 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 14-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VEJY3_07710 f61f3a4c57c60775891ebb25c7393bda 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.1E-38 T 14-10-2018 IPR006214 Bax inhibitor 1-related VEJY3_09605 d000f8d50d429efb5f83e383b1777313 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 1.4E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VEJY3_01015 bfe4a0c0e80637141099aeafc9a191d7 403 Pfam PF01943 Polysaccharide biosynthesis protein 3 249 8.0E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VEJY3_08750 76149b69f1e7ea84f48dc518011453f0 449 Pfam PF04932 O-Antigen ligase 226 363 3.1E-18 T 14-10-2018 IPR007016 O-antigen ligase-related VEJY3_05855 dad5185a7a01fbb601761c34b5006b1d 144 Gene3D G3DSA:3.10.450.40 64 129 1.6E-6 T 14-10-2018 VEJY3_02215 6ade0280dbf738bc5e0050e4787d05b2 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 1.5E-17 T 14-10-2018 IPR021710 Protein of unknown function DUF3293 VEJY3_23126 a7c82690cdbe72fa6136cbe828b28eb7 272 Pfam PF10364 Putative capsular polysaccharide synthesis protein 119 254 3.0E-48 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS VEJY3_23126 a7c82690cdbe72fa6136cbe828b28eb7 272 SUPERFAMILY SSF52540 20 269 1.02E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEJY3_02885 651ee6a4eb3bcd7a5dc8553eb6c27327 455 Pfam PF03553 Na+/H+ antiporter family 16 220 1.4E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEJY3_19106 940ed13b78e323b1b57c337aadcd6ad3 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 1.4E-124 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VEJY3_00585 95bb635d47b2673799d1cc87fed5bae2 686 Pfam PF05170 AsmA family 1 569 1.8E-139 T 14-10-2018 IPR007844 AsmA VEJY3_01670 3ad440b145a27374af38b80a84094ef1 259 Pfam PF04784 Protein of unknown function, DUF547 88 197 2.7E-23 T 14-10-2018 IPR006869 Domain of unknown function DUF547 VEJY3_19361 e3d66d9f17dcdd866756b39f3f77c0fc 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.2E-36 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 VEJY3_19361 e3d66d9f17dcdd866756b39f3f77c0fc 186 Gene3D G3DSA:3.15.10.40 15 186 2.7E-46 T 14-10-2018 VEJY3_11800 9b107c4e724302bd79d0f904fc04a278 472 Pfam PF13289 SIR2-like domain 222 396 1.1E-10 T 14-10-2018 IPR039444 SIR2-like domain VEJY3_01875 120dbb8243acde7189aa2192be7d4873 223 Pfam PF16537 Type II secretion system protein B 158 217 4.3E-25 T 14-10-2018 IPR032389 Type II secretion system protein B VEJY3_07315 57e539376f07c4f58a593bc3a10e615d 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 7.2E-53 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 VEJY3_07645 cf96ae224674d400150e58c2e6d59bad 882 Pfam PF02470 MlaD protein 284 373 1.1E-6 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_07645 cf96ae224674d400150e58c2e6d59bad 882 Pfam PF02470 MlaD protein 649 732 9.2E-6 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_07645 cf96ae224674d400150e58c2e6d59bad 882 Pfam PF02470 MlaD protein 47 138 4.3E-13 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_07645 cf96ae224674d400150e58c2e6d59bad 882 Pfam PF02470 MlaD protein 397 467 3.8E-7 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_07645 cf96ae224674d400150e58c2e6d59bad 882 Pfam PF02470 MlaD protein 753 811 1.4E-6 T 14-10-2018 IPR003399 Mce/MlaD VEJY3_14550 ddffba2cf0ea0a63496416956fc3b3a4 177 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 5.7E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VEJY3_15145 0d340e8db4d6dd6c4339016abd5c42c7 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 8.4E-38 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 VEJY3_22046 8d6844c77fcb07acf1970aa163adc9c3 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 1.5E-29 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 VEJY3_18061 7fa7a257c0c31d64824120fb3f658706 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 146 3.9E-23 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_11260 e4f1f3a792cb8988d27117ff8b3a2b0e 163 Pfam PF02674 Colicin V production protein 4 143 6.0E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VEJY3_09140 7878f5498c84148c358725700e0e1af1 573 Gene3D G3DSA:1.20.1730.10 23 539 2.0E-120 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VEJY3_09140 7878f5498c84148c358725700e0e1af1 573 Pfam PF00474 Sodium:solute symporter family 35 434 2.8E-49 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEJY3_17051 eae0c3e29cfa815cb6cee92639b06d10 130 Pfam PF12614 Ribosome recycling factor 5 128 9.5E-57 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial VEJY3_18016 85c3b3cff0bc4457bed382affe23c782 634 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 118 535 2.2E-81 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEJY3_09870 8f76b63a569829aaf04b42134cbc056f 127 Gene3D G3DSA:3.30.1450.10 28 107 1.4E-6 T 14-10-2018 IPR037873 BamE-like VEJY3_09870 8f76b63a569829aaf04b42134cbc056f 127 Pfam PF04355 SmpA / OmlA family 30 93 9.0E-8 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VEJY3_05500 061802df0caedf8b9711b21038e27ed9 184 Pfam PF16036 Chalcone isomerase-like 44 180 5.7E-8 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 VEJY3_07570 babcd752efc69edafee13f764f8a8554 573 Pfam PF11949 Protein of unknown function (DUF3466) 252 573 8.2E-55 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VEJY3_07570 babcd752efc69edafee13f764f8a8554 573 Pfam PF11949 Protein of unknown function (DUF3466) 5 198 2.2E-6 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VEJY3_07025 6874713740c7cc7f9808cd7316130998 646 SUPERFAMILY SSF56300 154 560 2.98E-12 T 14-10-2018 VEJY3_07025 6874713740c7cc7f9808cd7316130998 646 Gene3D G3DSA:3.60.21.70 314 564 8.5E-10 T 14-10-2018 IPR038607 PhoD-like superfamily VEJY3_07970 a791c442a3522c3cfdfa4d74e31da337 383 Pfam PF12698 ABC-2 family transporter protein 22 367 2.0E-40 T 14-10-2018 VEJY3_17171 c282737b2a8475908514a344a71c64ed 179 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 11 174 2.7E-52 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VEJY3_15776 d8c0bc2f9078450f356f11408bd588f6 655 Pfam PF11826 Protein of unknown function (DUF3346) 289 513 8.2E-143 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 VEJY3_12500 7f1404bc7d1d882fd851bb95feef3c8b 424 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 60 1.5E-9 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VEJY3_08960 6f028292ecea6f5c6ae70f101986ce7d 357 Pfam PF02378 Phosphotransferase system, EIIC 18 281 8.6E-12 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEJY3_07075 5481bf4ec6b4260666124b2a7bec1f03 335 Pfam PF11279 Protein of unknown function (DUF3080) 26 329 5.6E-83 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 VEJY3_08780 1b6672a47a7a3743e1884e5dcc17cd4c 212 Pfam PF02397 Bacterial sugar transferase 14 207 2.2E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase VEJY3_08525 ccc7639aceb003db94e65f4bf8f76f88 179 Pfam PF02517 CAAX protease self-immunity 72 163 1.6E-9 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 VEJY3_21881 b14f76c4fb798f45f9a2dace4e315fa9 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 1.1E-51 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VEJY3_21881 b14f76c4fb798f45f9a2dace4e315fa9 248 Gene3D G3DSA:2.50.20.10 16 244 1.1E-56 T 14-10-2018 VEJY3_15926 759736ecee25188020367ba6e6b4fca1 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.4E-29 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VEJY3_06055 dc989d21f026e9eb914f0e9676fc134e 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 8.1E-96 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 VEJY3_20041 52ee4a754db29903a9a9684299bcc1b9 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 1.7E-27 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 VEJY3_18026 533beac72e2a99b9612e948acf36b176 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 4.0E-32 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 VEJY3_18821 44c30e2939cb4e4fc7612dbf73e966c6 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 173 2.9E-20 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEJY3_24366 422ca67003af9e3a6a089cfaf0ebe0a2 558 Pfam PF03961 Flagellar Assembly Protein A 81 545 8.4E-119 T 14-10-2018 IPR005646 Flagellar assembly protein A VEJY3_03280 c14f4edeffe8579d375739ee54357ec7 201 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.3E-35 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VEJY3_01620 0458c7d4f5e1f7e444dbe6cf7d4b659e 267 Pfam PF06738 Putative threonine/serine exporter 21 258 6.8E-67 T 14-10-2018 IPR010619 Putative threonine/serine exporter VEJY3_04570 88d6af8850df1a2f05213f106758a1ff 519 Pfam PF04293 SpoVR like protein 26 456 4.5E-177 T 14-10-2018 IPR007390 Sporulation stage V, protein R VEJY3_12135 78a50bfd3578112cd0bc98dc8ad23fa1 528 Pfam PF03806 AbgT putative transporter family 19 526 2.2E-225 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VEJY3_06845 382cc38f31bb22daf39fe08c34430550 554 Pfam PF02653 Branched-chain amino acid transport system / permease component 265 536 1.4E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_20566 1b3e44d3d69ea9eb00269c446654339d 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 4.9E-17 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 VEJY3_01930 e497d657bc97ad37edb948561965aecd 152 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 3.0E-38 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 VEJY3_08745 7ddc12b56e40011e9f8abca564e5f8d6 475 Pfam PF01943 Polysaccharide biosynthesis protein 6 264 5.0E-7 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VEJY3_12615 51dc5b50eca87f88ddbbb12c017f8b5e 60 Pfam PF17320 Family of unknown function (DUF5363) 1 46 2.5E-9 T 14-10-2018 IPR035292 Protein of unknown function DUF5363 VEJY3_01105 db0f0a41d4a042fbff09872d372e6df5 362 Pfam PF01757 Acyltransferase family 12 336 1.3E-21 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEJY3_18411 d1f3965cb10d251bcacf166512e96b57 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 9.3E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEJY3_12475 8a63ec5969931ab5c2d15947192b1d88 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 4.0E-17 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_14000 54d51f8f3641a6f779effaf2e3b24c64 241 Pfam PF04338 Protein of unknown function, DUF481 26 241 1.3E-51 T 14-10-2018 IPR007433 Protein of unknown function DUF481 VEJY3_03510 779ba0b654c5e03fe57f19579c71c3cc 212 PIRSF PIRSF028688 1 212 1.6E-117 T 14-10-2018 IPR014549 Flagellar protein FlgO VEJY3_04120 1d353e8527f2bbda57670b5d2a29e045 455 Pfam PF02386 Cation transport protein 49 437 3.2E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEJY3_06235 16b7eaab6c33153d5a26ed87b42351e2 292 Pfam PF03547 Membrane transport protein 150 284 9.6E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEJY3_15851 bbf11a0142a31d2f77aa5d2c708c2623 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 1.4E-25 T 14-10-2018 IPR007263 Protein of unknown function DUF393 VEJY3_04035 5704a4225c922375a322754c815bf257 299 Pfam PF01844 HNH endonuclease 225 280 1.1E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VEJY3_09055 20ee08c8d4f5cdfd4e98c1875f2461d7 113 Gene3D G3DSA:2.40.128.20 3 98 7.5E-8 T 14-10-2018 IPR012674 Calycin VEJY3_23041 f32721a431f7b15ee9311eb7ae804f5e 117 Pfam PF16068 Domain of unknown function (DUF4810) 28 112 6.9E-24 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats VEJY3_18761 70518bc44cb6e7e13b1b374c72ced57d 150 Pfam PF04319 NifZ domain 6 75 8.1E-22 T 14-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 VEJY3_16301 e207b5a758889f69ab87ce30daacb3ad 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 4.8E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEJY3_16301 e207b5a758889f69ab87ce30daacb3ad 134 Gene3D G3DSA:3.30.420.270 61 129 4.3E-11 T 14-10-2018 VEJY3_20896 b642d8710e15104947b7e3b7eb9b8824 68 Pfam PF00872 Transposase, Mutator family 3 67 4.0E-10 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 VEJY3_01785 cbe3335f5712b15dbfa7e7d74c3a2fdb 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 201 5.9E-20 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 VEJY3_11655 87da38a2ded3ef44cebd0b84c64f5c48 118 Pfam PF11169 Protein of unknown function (DUF2956) 12 114 3.6E-42 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 VEJY3_08400 007472c48fcaed37e1987248a9a1c81f 150 Pfam PF04982 HPP family 34 140 2.2E-36 T 14-10-2018 IPR007065 HPP VEJY3_15941 1f7456979aa42e632d0995d7dd0129f4 341 Pfam PF01757 Acyltransferase family 8 325 2.6E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEJY3_10990 7074e0cffefd144005874ad72ca96002 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 3.5E-63 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VEJY3_24201 309f4ea19cd0c0280785c38521092aa9 241 Pfam PF01925 Sulfite exporter TauE/SafE 9 232 3.6E-14 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEJY3_00370 ab09a68e1a87b9dcc9470ef7bc5e08aa 306 Pfam PF00482 Type II secretion system (T2SS), protein F 166 294 7.8E-13 T 14-10-2018 IPR018076 Type II secretion system F domain VEJY3_15891 c48d238f7bada316e14d6a129c9c8336 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.7E-36 T 14-10-2018 IPR007335 Protein of unknown function DUF413 VEJY3_17306 f7dbde0d74fd850939e2594db6995ccc 345 Pfam PF14321 Domain of unknown function (DUF4382) 31 209 1.3E-19 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 VEJY3_06900 8804f0a75816e9f1a88b1ae0296c434a 176 Pfam PF04955 HupE / UreJ protein 12 170 3.0E-21 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein VEJY3_06700 4445bd23183f8242950717e13e79c90b 517 Pfam PF17482 Phage tail sheath C-terminal domain 408 512 4.3E-8 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain VEJY3_22051 5492f1b3df7cb7dfa138f60bde575668 454 Pfam PF07670 Nucleoside recognition 140 233 1.7E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936