locus-tag class description M4S28_00010 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase M4S28_00015 IPR009252 Cell division protein ZapB M4S28_00060 IPR000843 LacI-type HTH domain M4S28_00060 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_00060 IPR028082 Periplasmic binding protein-like I M4S28_00070 IPR023333 Proteasome B-type subunit M4S28_00070 IPR001353 Proteasome, subunit alpha/beta M4S28_00070 IPR022281 ATP-dependent protease, HslV subunit M4S28_00070 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_00075 IPR019489 Clp ATPase, C-terminal M4S28_00075 IPR004491 Heat shock protein HslU M4S28_00075 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00075 IPR003959 ATPase, AAA-type, core M4S28_00075 IPR003593 AAA+ ATPase domain M4S28_00080 IPR026046 UbiA prenyltransferase domain containing protein 1 M4S28_00080 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase M4S28_00080 IPR000537 UbiA prenyltransferase family M4S28_00085 IPR010203 Regulator of ribonuclease activity A M4S28_00085 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M4S28_00085 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M4S28_00085 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria M4S28_00090 IPR009252 Cell division protein ZapB M4S28_00095 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase M4S28_00110 IPR008523 Protein of unknown function DUF805 M4S28_00120 IPR020861 Triosephosphate isomerase, active site M4S28_00120 IPR000652 Triosephosphate isomerase M4S28_00120 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic M4S28_00120 IPR035990 Triosephosphate isomerase superfamily M4S28_00120 IPR013785 Aldolase-type TIM barrel M4S28_00125 IPR011335 Restriction endonuclease type II-like M4S28_00125 IPR007569 Protein of unknown function DUF559 M4S28_00130 IPR022953 ATP-dependent 6-phosphofructokinase M4S28_00130 IPR015912 Phosphofructokinase, conserved site M4S28_00130 IPR000023 Phosphofructokinase domain M4S28_00130 IPR035966 Phosphofructokinase superfamily M4S28_00130 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type M4S28_00130 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic M4S28_00135 IPR023783 Cation efflux pump FieF M4S28_00135 IPR036837 Cation efflux protein, cytoplasmic domain superfamily M4S28_00135 IPR027470 Cation efflux protein, cytoplasmic domain M4S28_00135 IPR002524 Cation efflux protein M4S28_00135 IPR027469 Cation efflux transmembrane domain superfamily M4S28_00145 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00145 IPR011006 CheY-like superfamily M4S28_00145 IPR001789 Signal transduction response regulator, receiver domain M4S28_00145 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_00145 IPR039420 Transcriptional regulatory protein WalR-like M4S28_00150 IPR038515 CpxA, periplasmic domain superfamily M4S28_00150 IPR003660 HAMP domain M4S28_00150 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_00150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_00150 IPR005467 Histidine kinase domain M4S28_00150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_00150 IPR032404 Two-component sensor protein CpxA, periplasmic domain M4S28_00150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_00150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_00155 IPR001189 Manganese/iron superoxide dismutase M4S28_00155 IPR019833 Manganese/iron superoxide dismutase, binding site M4S28_00155 IPR019832 Manganese/iron superoxide dismutase, C-terminal M4S28_00155 IPR019831 Manganese/iron superoxide dismutase, N-terminal M4S28_00155 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily M4S28_00155 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily M4S28_00160 IPR029028 Alpha/beta knot methyltransferases M4S28_00160 IPR001537 tRNA/rRNA methyltransferase, SpoU type M4S28_00160 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase M4S28_00160 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_00165 IPR007313 FxsA cytoplasmic membrane protein M4S28_00170 IPR000362 Fumarate lyase family M4S28_00170 IPR024083 Fumarase/histidase, N-terminal M4S28_00170 IPR004708 Aspartate ammonia-lyase M4S28_00170 IPR020557 Fumarate lyase, conserved site M4S28_00170 IPR008948 L-Aspartase-like M4S28_00170 IPR018951 Fumarase C, C-terminal M4S28_00170 IPR022761 Fumarate lyase, N-terminal M4S28_00175 IPR004668 Anaerobic c4-dicarboxylate membrane transporter M4S28_00180 IPR018385 C4-dicarboxylate anaerobic carrier-like M4S28_00185 IPR003876 Arginine deiminase M4S28_00190 IPR003964 Carbamate kinase M4S28_00190 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_00190 IPR036393 Acetylglutamate kinase-like superfamily M4S28_00195 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M4S28_00195 IPR024904 Ornithine carbamoyltransferase M4S28_00195 IPR002292 Ornithine/putrescine carbamoyltransferase M4S28_00195 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M4S28_00195 IPR006130 Aspartate/ornithine carbamoyltransferase M4S28_00195 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M4S28_00200 IPR006130 Aspartate/ornithine carbamoyltransferase M4S28_00200 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M4S28_00200 IPR002082 Aspartate carbamoyltransferase M4S28_00200 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M4S28_00200 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M4S28_00205 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily M4S28_00205 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M4S28_00205 IPR002801 Aspartate transcarbamylase regulatory subunit M4S28_00205 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal M4S28_00205 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M4S28_00210 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00210 IPR036390 Winged helix DNA-binding domain superfamily M4S28_00210 IPR020900 Arginine repressor, DNA-binding domain M4S28_00210 IPR036251 Arginine repressor, C-terminal domain superfamily M4S28_00210 IPR020899 Arginine repressor, C-terminal M4S28_00210 IPR001669 Arginine repressor M4S28_00215 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M4S28_00215 IPR013766 Thioredoxin domain M4S28_00215 IPR017937 Thioredoxin, conserved site M4S28_00215 IPR035671 DsbD gamma M4S28_00215 IPR022910 Thiol:disulphide interchange protein DsbD M4S28_00215 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M4S28_00215 IPR003834 Cytochrome C biogenesis protein, transmembrane domain M4S28_00215 IPR036249 Thioredoxin-like superfamily M4S28_00220 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_00220 IPR001789 Signal transduction response regulator, receiver domain M4S28_00220 IPR000792 Transcription regulator LuxR, C-terminal M4S28_00220 IPR011006 CheY-like superfamily M4S28_00225 IPR006153 Cation/H+ exchanger M4S28_00225 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_00225 IPR038770 Sodium/solute symporter superfamily M4S28_00225 IPR030151 K(+)/H(+) antiporter NhaP M4S28_00225 IPR023729 K(+)/H(+) antiporter NhaP2 M4S28_00225 IPR006037 Regulator of K+ conductance, C-terminal M4S28_00225 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_00225 IPR005170 Transporter-associated domain M4S28_00225 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_00235 IPR001734 Sodium/solute symporter M4S28_00235 IPR019899 Sodium/solute symporter, VC2705 subfamily M4S28_00235 IPR038377 Sodium/glucose symporter superfamily M4S28_00245 IPR005677 Fumarate hydratase, class II M4S28_00245 IPR018951 Fumarase C, C-terminal M4S28_00245 IPR020557 Fumarate lyase, conserved site M4S28_00245 IPR000362 Fumarate lyase family M4S28_00245 IPR022761 Fumarate lyase, N-terminal M4S28_00245 IPR008948 L-Aspartase-like M4S28_00245 IPR024083 Fumarase/histidase, N-terminal M4S28_00250 IPR011006 CheY-like superfamily M4S28_00250 IPR003660 HAMP domain M4S28_00250 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_00250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_00250 IPR005467 Histidine kinase domain M4S28_00250 IPR036641 HPT domain superfamily M4S28_00250 IPR037952 Sensor histidine kinase TorS, sensor domain M4S28_00250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_00250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_00250 IPR001789 Signal transduction response regulator, receiver domain M4S28_00250 IPR038188 TorS, sensor domain superfamily M4S28_00250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_00250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_00255 IPR026032 Probable 3-phenylpropionic acid transporter M4S28_00255 IPR024989 Major facilitator superfamily associated domain M4S28_00255 IPR036259 MFS transporter superfamily M4S28_00270 IPR042099 AMP-dependent synthetase-like superfamily M4S28_00270 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain M4S28_00270 IPR011904 Acetate-CoA ligase M4S28_00270 IPR000873 AMP-dependent synthetase/ligase M4S28_00270 IPR020845 AMP-binding, conserved site M4S28_00270 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_00275 IPR001874 Dehydroquinase, class II M4S28_00275 IPR018509 Dehydroquinase, class II, conserved site M4S28_00275 IPR036441 Dehydroquinase, class II superfamily M4S28_00280 IPR011053 Single hybrid motif M4S28_00280 IPR001249 Acetyl-CoA biotin carboxyl carrier M4S28_00280 IPR001882 Biotin-binding site M4S28_00280 IPR000089 Biotin/lipoyl attachment M4S28_00285 IPR011761 ATP-grasp fold M4S28_00285 IPR013815 ATP-grasp fold, subdomain 1 M4S28_00285 IPR005481 Biotin carboxylase-like, N-terminal domain M4S28_00285 IPR011764 Biotin carboxylation domain M4S28_00285 IPR005482 Biotin carboxylase, C-terminal M4S28_00285 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M4S28_00285 IPR016185 Pre-ATP-grasp domain superfamily M4S28_00285 IPR011054 Rudiment single hybrid motif M4S28_00285 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase M4S28_00290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_00290 IPR004498 Ribosomal protein L11 methyltransferase M4S28_00295 IPR032887 tRNA-dihydrouridine synthase B M4S28_00295 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal M4S28_00295 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 M4S28_00295 IPR001269 tRNA-dihydrouridine synthase M4S28_00295 IPR018517 tRNA-dihydrouridine synthase, conserved site M4S28_00295 IPR013785 Aldolase-type TIM barrel M4S28_00295 IPR035587 DUS-like, FMN-binding domain M4S28_00300 IPR002197 DNA binding HTH domain, Fis-type M4S28_00300 IPR005412 DNA-binding protein Fis M4S28_00300 IPR009057 Homeobox-like domain superfamily M4S28_00305 IPR009061 Putative DNA-binding domain superfamily M4S28_00305 IPR000551 MerR-type HTH domain M4S28_00305 IPR011788 Zn(II)-responsive transcriptional regulator M4S28_00310 IPR011607 Methylglyoxal synthase-like domain M4S28_00310 IPR016193 Cytidine deaminase-like M4S28_00310 IPR024051 AICAR transformylase, duplicated domain superfamily M4S28_00310 IPR002695 Bifunctional purine biosynthesis protein PurH-like M4S28_00310 IPR036914 Methylglyoxal synthase-like domain superfamily M4S28_00315 IPR011761 ATP-grasp fold M4S28_00315 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal M4S28_00315 IPR011054 Rudiment single hybrid motif M4S28_00315 IPR013815 ATP-grasp fold, subdomain 1 M4S28_00315 IPR020559 Phosphoribosylglycinamide synthetase, conserved site M4S28_00315 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily M4S28_00315 IPR020560 Phosphoribosylglycinamide synthetase, C-domain M4S28_00315 IPR000115 Phosphoribosylglycinamide synthetase M4S28_00315 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M4S28_00315 IPR016185 Pre-ATP-grasp domain superfamily M4S28_00325 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_00325 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_00325 IPR000119 Histone-like DNA-binding protein M4S28_00330 IPR002550 CNNM, transmembrane domain M4S28_00330 IPR000644 CBS domain M4S28_00335 IPR023381 YP001051499.1-like domain superfamily M4S28_00335 IPR007338 Protein of unknown function DUF416 M4S28_00345 IPR005122 Uracil-DNA glycosylase-like M4S28_00345 IPR036895 Uracil-DNA glycosylase-like domain superfamily M4S28_00350 IPR038071 UROD/MetE-like superfamily M4S28_00350 IPR006361 Uroporphyrinogen decarboxylase HemE M4S28_00350 IPR000257 Uroporphyrinogen decarboxylase (URO-D) M4S28_00355 IPR022925 NADH pyrophosphatase NudC M4S28_00355 IPR020476 NUDIX hydrolase M4S28_00355 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_00355 IPR020084 NUDIX hydrolase, conserved site M4S28_00355 IPR000086 NUDIX hydrolase domain M4S28_00355 IPR015376 Zinc ribbon, NADH pyrophosphatase M4S28_00360 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M4S28_00360 IPR038309 Rsd/AlgQ superfamily M4S28_00360 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd M4S28_00365 IPR012754 DNA-directed RNA polymerase, subunit beta-prime M4S28_00365 IPR000722 RNA polymerase, alpha subunit M4S28_00365 IPR007080 RNA polymerase Rpb1, domain 1 M4S28_00365 IPR007066 RNA polymerase Rpb1, domain 3 M4S28_00365 IPR042102 RNA polymerase Rpb1, domain 3 superfamily M4S28_00365 IPR007083 RNA polymerase Rpb1, domain 4 M4S28_00365 IPR007081 RNA polymerase Rpb1, domain 5 M4S28_00365 IPR038120 RNA polymerase Rpb1, funnel domain superfamily M4S28_00365 IPR006592 RNA polymerase, N-terminal M4S28_00370 IPR037034 RNA polymerase Rpb2, domain 2 superfamily M4S28_00370 IPR014724 RNA polymerase Rpb2, OB-fold M4S28_00370 IPR007641 RNA polymerase Rpb2, domain 7 M4S28_00370 IPR007645 RNA polymerase Rpb2, domain 3 M4S28_00370 IPR007642 RNA polymerase Rpb2, domain 2 M4S28_00370 IPR007644 RNA polymerase, beta subunit, protrusion M4S28_00370 IPR007121 RNA polymerase, beta subunit, conserved site M4S28_00370 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type M4S28_00370 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily M4S28_00370 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain M4S28_00370 IPR015712 DNA-directed RNA polymerase, subunit 2 M4S28_00370 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain M4S28_00375 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M4S28_00375 IPR000206 Ribosomal protein L7/L12 M4S28_00375 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily M4S28_00375 IPR013823 Ribosomal protein L7/L12, C-terminal M4S28_00375 IPR008932 Ribosomal protein L7/L12, oligomerisation M4S28_00380 IPR002363 Ribosomal protein L10, eubacterial, conserved site M4S28_00380 IPR022973 Ribosomal protein L10 M4S28_00380 IPR001790 Ribosomal protein L10P M4S28_00385 IPR005878 Ribosomal protein L1, bacterial-type M4S28_00385 IPR002143 Ribosomal protein L1 M4S28_00385 IPR023674 Ribosomal protein L1-like M4S28_00385 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein M4S28_00385 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich M4S28_00385 IPR023673 Ribosomal protein L1, conserved site M4S28_00390 IPR000911 Ribosomal protein L11/L12 M4S28_00390 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M4S28_00390 IPR006519 Ribosomal protein L11, bacterial-type M4S28_00390 IPR020783 Ribosomal protein L11, C-terminal M4S28_00390 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M4S28_00390 IPR020785 Ribosomal protein L11, conserved site M4S28_00390 IPR020784 Ribosomal protein L11, N-terminal M4S28_00395 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site M4S28_00395 IPR008991 Translation protein SH3-like domain superfamily M4S28_00395 IPR036735 NusG, N-terminal domain superfamily M4S28_00395 IPR014722 Ribosomal protein L2, domain 2 M4S28_00395 IPR006645 NusG, N-terminal M4S28_00395 IPR001062 Transcription antitermination protein, NusG M4S28_00395 IPR005824 KOW M4S28_00400 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit M4S28_00400 IPR005807 SecE subunit of protein translocation complex, bacterial-like M4S28_00400 IPR038379 SecE superfamily M4S28_00405 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain M4S28_00405 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_00405 IPR033720 Elongation factor Tu, domain 2 M4S28_00405 IPR031157 Tr-type G domain, conserved site M4S28_00405 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M4S28_00405 IPR005225 Small GTP-binding protein domain M4S28_00405 IPR000795 Transcription factor, GTP-binding domain M4S28_00405 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_00405 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M4S28_00405 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle M4S28_00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00430 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00430 IPR006083 Phosphoribulokinase/uridine kinase M4S28_00430 IPR004566 Pantothenate kinase M4S28_00435 IPR036390 Winged helix DNA-binding domain superfamily M4S28_00435 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00435 IPR013196 Helix-turn-helix, type 11 M4S28_00435 IPR008988 Transcriptional repressor, C-terminal M4S28_00435 IPR003142 Biotin protein ligase, C-terminal M4S28_00435 IPR004409 Biotin operon repressor, helix-turn-helix domain M4S28_00435 IPR004408 Biotin--acetyl-CoA-carboxylase ligase M4S28_00435 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M4S28_00435 IPR030855 Bifunctional ligase/repressor BirA M4S28_00440 IPR016166 FAD-binding domain, PCMH-type M4S28_00440 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_00440 IPR016167 FAD-binding, type PCMH, subdomain 1 M4S28_00440 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_00440 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase M4S28_00440 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal M4S28_00440 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily M4S28_00440 IPR006094 FAD linked oxidase, N-terminal M4S28_00450 IPR025202 Phospholipase D-like domain M4S28_00450 IPR016270 CDP-alcohol phosphatidyltransferase class-II family M4S28_00450 IPR001736 Phospholipase D/Transphosphatidylase M4S28_00550 IPR015942 Asp/Glu/hydantoin racemase M4S28_00550 IPR001920 Asp/Glu racemase M4S28_00550 IPR018187 Asp/Glu racemase, active site 1 M4S28_00550 IPR004391 Glutamate racemase M4S28_00560 IPR010101 TonB-dependent vitamin B12 transporter BtuB M4S28_00560 IPR039426 Vitamin B12 transporter BtuB-like M4S28_00560 IPR012910 TonB-dependent receptor, plug domain M4S28_00560 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_00560 IPR010916 TonB box, conserved site M4S28_00560 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_00560 IPR010917 TonB-dependent receptor, conserved site M4S28_00560 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_00565 IPR030391 RNA methyltransferase TrmA, conserved site M4S28_00565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_00565 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA M4S28_00565 IPR010280 (Uracil-5)-methyltransferase family M4S28_00565 IPR030390 RNA methyltransferase TrmA, active site M4S28_00575 IPR023764 Transcriptional repressor HTH, FabR M4S28_00575 IPR001647 DNA-binding HTH domain, TetR-type M4S28_00575 IPR009057 Homeobox-like domain superfamily M4S28_00585 IPR022962 Soluble pyridine nucleotide transhydrogenase M4S28_00585 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_00585 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M4S28_00585 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_00585 IPR023753 FAD/NAD(P)-binding domain M4S28_00585 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_00590 IPR002528 Multi antimicrobial extrusion protein M4S28_00595 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP M4S28_00595 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp M4S28_00595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_00600 IPR006200 Transcription regulator LexA M4S28_00600 IPR039418 LexA-like M4S28_00600 IPR036286 LexA/Signal peptidase-like superfamily M4S28_00600 IPR006199 LexA repressor, DNA-binding domain M4S28_00600 IPR006197 Peptidase S24, LexA-like M4S28_00600 IPR015927 Peptidase S24/S26A/S26B/S26C M4S28_00600 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00600 IPR036390 Winged helix DNA-binding domain superfamily M4S28_00605 IPR036945 Diacylglycerol kinase (DAGK) superfamily M4S28_00605 IPR000829 DAGK family M4S28_00605 IPR033718 Diacylglycerol kinase, prokaryotic M4S28_00610 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase M4S28_00610 IPR041728 GPAT/DHAPAT, acyltransferase domain M4S28_00610 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB M4S28_00610 IPR002123 Phospholipid/glycerol acyltransferase M4S28_00615 IPR039653 Prenyltransferase M4S28_00615 IPR000537 UbiA prenyltransferase family M4S28_00615 IPR006370 4-hydroxybenzoate polyprenyltransferase-like M4S28_00620 IPR007440 Chorismate--pyruvate lyase M4S28_00620 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_00625 IPR005503 Flagellar basal body-associated protein FliL M4S28_00630 IPR038236 GlpG peptidase, N-terminal domain superfamily M4S28_00630 IPR022732 Peptidase S54, GlpG peptidase, N-terminal M4S28_00630 IPR022764 Peptidase S54, rhomboid domain M4S28_00630 IPR035952 Rhomboid-like superfamily M4S28_00630 IPR023662 Rhomboid protease GlpG M4S28_00635 IPR001763 Rhodanese-like domain M4S28_00635 IPR036873 Rhodanese-like domain superfamily M4S28_00635 IPR023695 Thiosulfate sulfurtransferase, bacterial M4S28_00640 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria M4S28_00640 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_00640 IPR013325 RNA polymerase sigma factor, region 2 M4S28_00640 IPR007630 RNA polymerase sigma-70 region 4 M4S28_00640 IPR009042 RNA polymerase sigma-70 region 1.2 M4S28_00640 IPR000943 RNA polymerase sigma-70 M4S28_00640 IPR014284 RNA polymerase sigma-70 like domain M4S28_00640 IPR007627 RNA polymerase sigma-70 region 2 M4S28_00645 IPR004513 Cell division protein FtsX M4S28_00645 IPR040690 FtsX, extracellular domain M4S28_00650 IPR005286 Cell division protein FtsE, ATP-binding M4S28_00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00650 IPR017871 ABC transporter, conserved site M4S28_00650 IPR003593 AAA+ ATPase domain M4S28_00650 IPR003439 ABC transporter-like M4S28_00655 IPR004390 Signal-recognition particle receptor FtsY M4S28_00655 IPR036225 SRP/SRP receptor, N-terminal M4S28_00655 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M4S28_00655 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M4S28_00655 IPR003593 AAA+ ATPase domain M4S28_00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00655 IPR013822 Signal recognition particle SRP54, helical bundle M4S28_00655 IPR004390 Signal-recognition particle receptor FtsY M4S28_00655 IPR036225 SRP/SRP receptor, N-terminal M4S28_00655 IPR013822 Signal recognition particle SRP54, helical bundle M4S28_00655 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M4S28_00655 IPR003593 AAA+ ATPase domain M4S28_00655 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M4S28_00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00660 IPR004398 RNA methyltransferase, RsmD M4S28_00660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_00660 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_00670 IPR002771 Multiple antibiotic resistance (MarC)-related M4S28_00710 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M4S28_00710 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M4S28_00710 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M4S28_00710 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M4S28_00710 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M4S28_00710 IPR036291 NAD(P)-binding domain superfamily M4S28_00715 IPR036390 Winged helix DNA-binding domain superfamily M4S28_00715 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00715 IPR001845 HTH ArsR-type DNA-binding domain M4S28_00715 IPR011991 ArsR-like helix-turn-helix domain M4S28_00720 IPR035919 EAL domain superfamily M4S28_00720 IPR001633 EAL domain M4S28_00720 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M4S28_00720 IPR013976 Metal-dependent hydrolase HDOD M4S28_00725 IPR001123 Amino acid exporter protein, LeuE-type M4S28_00730 IPR022742 Serine aminopeptidase, S33 M4S28_00730 IPR029058 Alpha/Beta hydrolase fold M4S28_00735 IPR006379 HAD-superfamily hydrolase, subfamily IIB M4S28_00735 IPR023214 HAD superfamily M4S28_00735 IPR000150 Cof family M4S28_00735 IPR036412 HAD-like superfamily M4S28_00750 IPR005636 DTW M4S28_00750 IPR039262 DTW domain-containing protein 2 M4S28_00755 IPR000160 GGDEF domain M4S28_00755 IPR001633 EAL domain M4S28_00755 IPR035919 EAL domain superfamily M4S28_00755 IPR019494 FIST, C-domain M4S28_00755 IPR013702 FIST domain, N-terminal M4S28_00755 IPR029787 Nucleotide cyclase M4S28_00760 IPR001633 EAL domain M4S28_00760 IPR029787 Nucleotide cyclase M4S28_00760 IPR000160 GGDEF domain M4S28_00760 IPR013702 FIST domain, N-terminal M4S28_00760 IPR019494 FIST, C-domain M4S28_00760 IPR035919 EAL domain superfamily M4S28_00765 IPR023214 HAD superfamily M4S28_00765 IPR006439 HAD hydrolase, subfamily IA M4S28_00765 IPR036412 HAD-like superfamily M4S28_00765 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_00770 IPR004107 Integrase, SAM-like, N-terminal M4S28_00770 IPR010998 Integrase/recombinase, N-terminal M4S28_00770 IPR002104 Integrase, catalytic domain M4S28_00770 IPR011931 Tyrosine recombinase XerC M4S28_00770 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_00770 IPR023009 Tyrosine recombinase XerC/XerD M4S28_00770 IPR013762 Integrase-like, catalytic domain superfamily M4S28_00780 IPR018510 Diaminopimelate epimerase, active site M4S28_00780 IPR001653 Diaminopimelate epimerase, DapF M4S28_00785 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M4S28_00785 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal M4S28_00785 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site M4S28_00785 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M4S28_00785 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site M4S28_00785 IPR000183 Ornithine/DAP/Arg decarboxylase M4S28_00785 IPR029066 PLP-binding barrel M4S28_00785 IPR002986 Diaminopimelate decarboxylase, LysA M4S28_00795 IPR002908 Frataxin/CyaY M4S28_00795 IPR020895 Frataxin conserved site M4S28_00795 IPR036524 Frataxin/CyaY superfamily M4S28_00800 IPR024685 Adenylate cyclase class-I, N-terminal domain M4S28_00800 IPR000274 Adenylate cyclase, class-I M4S28_00800 IPR024686 Adenylate cyclase class-I, conserved site M4S28_00805 IPR000860 Porphobilinogen deaminase M4S28_00805 IPR022417 Porphobilinogen deaminase, N-terminal M4S28_00805 IPR022418 Porphobilinogen deaminase, C-terminal M4S28_00805 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily M4S28_00805 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site M4S28_00810 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily M4S28_00810 IPR039793 Uroporphyrinogen-III synthase M4S28_00810 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase M4S28_00815 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX M4S28_00820 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_00820 IPR010817 HemY, N-terminal M4S28_00820 IPR005254 Heme biosynthesis-associated TPR protein M4S28_00825 IPR024473 Transposase, IS4, N-terminal M4S28_00825 IPR012337 Ribonuclease H-like superfamily M4S28_00825 IPR002559 Transposase, IS4-like M4S28_00875 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_00875 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_00875 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_00875 IPR017938 Riboflavin synthase-like beta-barrel M4S28_00880 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F M4S28_00880 IPR017938 Riboflavin synthase-like beta-barrel M4S28_00880 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_00880 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_00880 IPR012675 Beta-grasp domain superfamily M4S28_00880 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_00880 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_00880 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_00885 IPR002830 UbiD decarboxylyase family M4S28_00895 IPR004665 Transcription termination factor Rho M4S28_00895 IPR011113 Rho termination factor, RNA-binding domain M4S28_00895 IPR036269 Rho termination factor, N-terminal domain superfamily M4S28_00895 IPR011112 Rho termination factor, N-terminal M4S28_00895 IPR041703 Transcription termination factor Rho, ATP binding domain M4S28_00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00895 IPR012340 Nucleic acid-binding, OB-fold M4S28_00895 IPR011129 Cold shock domain M4S28_00895 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_00895 IPR003593 AAA+ ATPase domain M4S28_00900 IPR005746 Thioredoxin M4S28_00900 IPR036249 Thioredoxin-like superfamily M4S28_00900 IPR017937 Thioredoxin, conserved site M4S28_00900 IPR013766 Thioredoxin domain M4S28_00905 IPR011545 DEAD/DEAH box helicase domain M4S28_00905 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_00905 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_00905 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00905 IPR023554 ATP-dependent RNA helicase RhlB type M4S28_00905 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_00905 IPR001650 Helicase, C-terminal M4S28_00910 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase M4S28_00910 IPR003695 Ppx/GppA phosphatase M4S28_00910 IPR030673 Pyrophosphatase, GppA/Ppx-type M4S28_00915 IPR003744 Queuosine precursor transporter M4S28_00925 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00925 IPR018982 RQC domain M4S28_00925 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00925 IPR002121 HRDC domain M4S28_00925 IPR004589 DNA helicase, ATP-dependent, RecQ type M4S28_00925 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_00925 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial M4S28_00925 IPR011545 DEAD/DEAH box helicase domain M4S28_00925 IPR010997 HRDC-like superfamily M4S28_00925 IPR001650 Helicase, C-terminal M4S28_00925 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M4S28_00930 IPR000620 EamA domain M4S28_00930 IPR004626 RarD protein M4S28_00935 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_00935 IPR009057 Homeobox-like domain superfamily M4S28_00935 IPR037923 Transcription regulator HTH-like M4S28_00935 IPR018060 DNA binding HTH domain, AraC-type M4S28_00935 IPR018062 HTH domain AraC-type, conserved site M4S28_00935 IPR014710 RmlC-like jelly roll fold M4S28_00935 IPR020449 Transcription regulator HTH, AraC- type M4S28_00935 IPR023609 Transcription regulator HTH, RhaS M4S28_00940 IPR004778 Homoserine/Threonine efflux protein M4S28_00940 IPR001123 Amino acid exporter protein, LeuE-type M4S28_00945 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_00945 IPR000101 Gamma-glutamyltranspeptidase M4S28_00950 IPR013740 Redoxin M4S28_00950 IPR036249 Thioredoxin-like superfamily M4S28_00950 IPR013766 Thioredoxin domain M4S28_00950 IPR002065 Thiol peroxidase Tpx M4S28_00950 IPR018219 Thiol peroxidase conserved site M4S28_00955 IPR013986 DExx box DNA helicase domain superfamily M4S28_00955 IPR005753 DNA helicase, ATP-dependent, UvrD type M4S28_00955 IPR014017 UvrD-like DNA helicase, C-terminal M4S28_00955 IPR000212 DNA helicase, UvrD/REP type M4S28_00955 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_00955 IPR014016 UvrD-like helicase, ATP-binding domain M4S28_00955 IPR034739 UvrD/AddA helicase, N-terminal M4S28_00965 IPR007801 Uncharacterised protein family UPF0276 M4S28_00965 IPR036237 Xylose isomerase-like superfamily M4S28_00985 IPR036259 MFS transporter superfamily M4S28_00985 IPR020846 Major facilitator superfamily domain M4S28_00985 IPR023697 Multidrug resistance protein MdtL M4S28_00985 IPR011701 Major facilitator superfamily M4S28_00990 IPR005119 LysR, substrate-binding M4S28_00990 IPR000847 Transcription regulator HTH, LysR M4S28_00990 IPR023746 Transcription regulator HTH, YidZ M4S28_00990 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_00990 IPR036390 Winged helix DNA-binding domain superfamily M4S28_00990 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M4S28_00995 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M4S28_00995 IPR001714 Peptidase M24, methionine aminopeptidase M4S28_00995 IPR000994 Peptidase M24 M4S28_00995 IPR000587 Creatinase, N-terminal M4S28_00995 IPR036005 Creatinase/aminopeptidase-like M4S28_00995 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M4S28_00995 IPR001714 Peptidase M24, methionine aminopeptidase M4S28_00995 IPR000994 Peptidase M24 M4S28_00995 IPR000587 Creatinase, N-terminal M4S28_00995 IPR036005 Creatinase/aminopeptidase-like M4S28_00995 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M4S28_00995 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M4S28_01000 IPR013785 Aldolase-type TIM barrel M4S28_01000 IPR010722 Biotin and thiamin synthesis-associated domain M4S28_01000 IPR007197 Radical SAM M4S28_01000 IPR012726 Thiazole biosynthesis ThiH M4S28_01000 IPR034428 ThiH/NocL/HydG-like M4S28_01005 IPR008867 Thiazole synthase M4S28_01005 IPR013785 Aldolase-type TIM barrel M4S28_01005 IPR033983 Thiazole synthase ThiG M4S28_01010 IPR012675 Beta-grasp domain superfamily M4S28_01010 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M4S28_01010 IPR010035 ThiS, thiamine-biosynthesis M4S28_01010 IPR003749 Sulfur carrier ThiS/MoaD-like M4S28_01020 IPR022998 Thiamine phosphate synthase/TenI M4S28_01020 IPR034291 Thiamine phosphate synthase M4S28_01020 IPR036206 Thiamin phosphate synthase superfamily M4S28_01020 IPR013785 Aldolase-type TIM barrel M4S28_01025 IPR025747 ThiC-associated domain M4S28_01025 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B M4S28_01025 IPR037509 Phosphomethylpyrimidine synthase M4S28_01025 IPR038521 ThiC/Bza superfamily M4S28_01030 IPR003691 Putative fluoride ion transporter CrcB M4S28_01035 IPR006376 Copper-resistance protein CopA M4S28_01035 IPR001117 Multicopper oxidase, type 1 M4S28_01035 IPR011706 Multicopper oxidase, type 2 M4S28_01035 IPR011707 Multicopper oxidase, type 3 M4S28_01035 IPR002355 Multicopper oxidase, copper-binding site M4S28_01035 IPR008972 Cupredoxin M4S28_01035 IPR034282 Copper resistance protein CopA, second cupredoxin domain M4S28_01035 IPR034279 Copper resistance protein, third cupredoxin domain M4S28_01035 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_01035 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M4S28_01035 IPR033138 Multicopper oxidases, conserved site M4S28_01035 IPR034284 Copper resistance protein, first cupredoxin domain M4S28_01080 IPR001451 Hexapeptide repeat M4S28_01080 IPR011004 Trimeric LpxA-like superfamily M4S28_01085 IPR009962 Protein of unknown function DUF1488 M4S28_01085 IPR036692 Shew3726-like superfamily M4S28_01090 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M4S28_01090 IPR022893 Shikimate dehydrogenase family M4S28_01090 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal M4S28_01090 IPR036291 NAD(P)-binding domain superfamily M4S28_01090 IPR041121 SDH, C-terminal M4S28_01090 IPR011342 Shikimate dehydrogenase M4S28_01095 IPR018375 Coproporphyrinogen III oxidase, conserved site M4S28_01095 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily M4S28_01095 IPR001260 Coproporphyrinogen III oxidase, aerobic M4S28_01100 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M4S28_01100 IPR023535 Threonylcarbamoyl-AMP synthase M4S28_01100 IPR006070 YrdC-like domain M4S28_01105 IPR033747 Class I PurE M4S28_01105 IPR000031 PurE domain M4S28_01105 IPR024694 PurE, prokaryotic type M4S28_01105 IPR035893 PurE domain superfamily M4S28_01110 IPR011054 Rudiment single hybrid motif M4S28_01110 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit M4S28_01110 IPR016185 Pre-ATP-grasp domain superfamily M4S28_01110 IPR013815 ATP-grasp fold, subdomain 1 M4S28_01110 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M4S28_01110 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain M4S28_01110 IPR011761 ATP-grasp fold M4S28_01115 IPR000380 DNA topoisomerase, type IA M4S28_01115 IPR013498 DNA topoisomerase, type IA, zn finger M4S28_01120 IPR007456 Smg M4S28_01125 IPR003488 DNA recombination-mediator protein A M4S28_01125 IPR041614 DprA, winged helix domain M4S28_01125 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_01135 IPR023635 Peptide deformylase M4S28_01135 IPR036821 Peptide deformylase superfamily M4S28_01140 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain M4S28_01140 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M4S28_01140 IPR011034 Formyl transferase-like, C-terminal domain superfamily M4S28_01140 IPR037022 Formyl transferase, C-terminal domain superfamily M4S28_01140 IPR002376 Formyl transferase, N-terminal M4S28_01140 IPR005793 Formyl transferase, C-terminal M4S28_01140 IPR036477 Formyl transferase, N-terminal domain superfamily M4S28_01140 IPR005794 Methionyl-tRNA formyltransferase M4S28_01145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01145 IPR004573 rRNA small subunit methyltransferase B M4S28_01145 IPR006027 NusB/RsmB/TIM44 M4S28_01145 IPR035926 NusB-like superfamily M4S28_01145 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M4S28_01145 IPR023267 RNA (C5-cytosine) methyltransferase M4S28_01145 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M4S28_01150 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_01150 IPR003148 Regulator of K+ conductance, N-terminal M4S28_01150 IPR036291 NAD(P)-binding domain superfamily M4S28_01150 IPR006036 Potassium uptake protein TrkA M4S28_01150 IPR006037 Regulator of K+ conductance, C-terminal M4S28_01155 IPR003445 Cation transporter M4S28_01155 IPR004772 TrkH potassium transport family M4S28_01165 IPR004254 AdipoR/Haemolysin-III-related M4S28_01165 IPR005744 Hly-III M4S28_01170 IPR014752 Arrestin, C-terminal M4S28_01170 IPR014756 Immunoglobulin E-set M4S28_01170 IPR009776 Sporulation stage 0, protein M M4S28_01180 IPR009383 Protein of unknown function DUF1040 M4S28_01180 IPR038134 YihD-like superfamily M4S28_01185 IPR013783 Immunoglobulin-like fold M4S28_01185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_01185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_01185 IPR032879 FixG, C-terminal immunoglobulin-like domain M4S28_01185 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG M4S28_01190 IPR002575 Aminoglycoside phosphotransferase M4S28_01190 IPR011009 Protein kinase-like domain superfamily M4S28_01190 IPR032882 SrkA/RdoA protein kinase M4S28_01195 IPR013766 Thioredoxin domain M4S28_01195 IPR001853 DSBA-like thioredoxin domain M4S28_01195 IPR036249 Thioredoxin-like superfamily M4S28_01195 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M4S28_01205 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_01205 IPR025158 Mg chelatase-related protein, C-terminal domain M4S28_01205 IPR004482 Mg chelatase-related protein M4S28_01205 IPR001208 MCM domain M4S28_01205 IPR003593 AAA+ ATPase domain M4S28_01205 IPR000523 Magnesium chelatase ChlI domain M4S28_01210 IPR012846 Acetolactate synthase, large subunit, biosynthetic M4S28_01210 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_01210 IPR029061 Thiamin diphosphate-binding fold M4S28_01210 IPR012000 Thiamine pyrophosphate enzyme, central domain M4S28_01210 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_01210 IPR000399 TPP-binding enzyme, conserved site M4S28_01210 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_01210 IPR039368 Acetolactate synthase large subunit, TPP binding domain M4S28_01215 IPR002912 ACT domain M4S28_01220 IPR036038 Aminotransferase-like, PLP-dependent enzymes M4S28_01220 IPR033939 Branched-chain aminotransferase M4S28_01220 IPR005785 Branched-chain amino acid aminotransferase I M4S28_01220 IPR018300 Aminotransferase, class IV, conserved site M4S28_01220 IPR001544 Aminotransferase class IV M4S28_01225 IPR042096 Dihydroxy-acid dehydratase, C-terminal M4S28_01225 IPR004404 Dihydroxy-acid dehydratase M4S28_01225 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase M4S28_01225 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site M4S28_01225 IPR037237 IlvD/EDD, N-terminal domain M4S28_01230 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_01230 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M4S28_01230 IPR001721 Threonine dehydratase, ACT-like domain M4S28_01230 IPR038110 Threonine dehydratase, ACT-like domain superfamily M4S28_01230 IPR005787 Threonine dehydratase, biosynthetic M4S28_01230 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_01235 IPR005119 LysR, substrate-binding M4S28_01235 IPR036390 Winged helix DNA-binding domain superfamily M4S28_01235 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_01235 IPR000847 Transcription regulator HTH, LysR M4S28_01240 IPR011701 Major facilitator superfamily M4S28_01240 IPR020846 Major facilitator superfamily domain M4S28_01240 IPR036259 MFS transporter superfamily M4S28_01240 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M4S28_01245 IPR011004 Trimeric LpxA-like superfamily M4S28_01245 IPR001451 Hexapeptide repeat M4S28_01245 IPR025877 MobA-like NTP transferase M4S28_01245 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase M4S28_01245 IPR038009 GlmU, C-terminal LbH domain M4S28_01245 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_01245 IPR018357 Hexapeptide transferase, conserved site M4S28_01250 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily M4S28_01250 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit M4S28_01250 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M4S28_01250 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal M4S28_01250 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal M4S28_01255 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01255 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal M4S28_01255 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M4S28_01255 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M4S28_01255 IPR003593 AAA+ ATPase domain M4S28_01255 IPR005722 ATP synthase, F1 complex, beta subunit M4S28_01255 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_01255 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M4S28_01260 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily M4S28_01260 IPR000131 ATP synthase, F1 complex, gamma subunit M4S28_01260 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site M4S28_01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01265 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_01265 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M4S28_01265 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M4S28_01265 IPR005294 ATP synthase, F1 complex, alpha subunit M4S28_01265 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain M4S28_01265 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M4S28_01265 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily M4S28_01265 IPR000793 ATP synthase, alpha subunit, C-terminal M4S28_01265 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M4S28_01270 IPR020781 ATPase, OSCP/delta subunit, conserved site M4S28_01270 IPR000711 ATPase, OSCP/delta subunit M4S28_01270 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily M4S28_01275 IPR005864 ATP synthase, F0 complex, subunit b, bacterial M4S28_01275 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M4S28_01275 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast M4S28_01280 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast M4S28_01280 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site M4S28_01280 IPR038662 F1F0 ATP synthase subunit C superfamily M4S28_01280 IPR002379 V-ATPase proteolipid subunit C-like domain M4S28_01280 IPR035921 F/V-ATP synthase subunit C superfamily M4S28_01280 IPR000454 ATP synthase, F0 complex, subunit C M4S28_01285 IPR000568 ATP synthase, F0 complex, subunit A M4S28_01285 IPR023011 ATP synthase, F0 complex, subunit A, active site M4S28_01285 IPR035908 ATP synthase, F0 complex, subunit A superfamily M4S28_01290 IPR005598 ATP synthase protein I M4S28_01295 IPR003115 ParB/Sulfiredoxin M4S28_01295 IPR036086 ParB/Sulfiredoxin superfamily M4S28_01295 IPR041468 ParB/Spo0J, HTH domain M4S28_01295 IPR004437 ParB/RepB/Spo0J partition protein M4S28_01300 IPR025669 AAA domain M4S28_01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01305 IPR003682 rRNA small subunit methyltransferase G M4S28_01305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01310 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_01310 IPR026904 GidA associated domain 3 M4S28_01310 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG M4S28_01310 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related M4S28_01310 IPR020595 MnmG-related, conserved site M4S28_01315 IPR029039 Flavoprotein-like superfamily M4S28_01315 IPR008254 Flavodoxin/nitric oxide synthase M4S28_01320 IPR031168 TrmE-type guanine nucleotide-binding domain M4S28_01320 IPR018948 GTP-binding protein TrmE, N-terminal M4S28_01320 IPR006073 GTP binding domain M4S28_01320 IPR004520 tRNA modification GTPase MnmE M4S28_01320 IPR027368 tRNA modification GTPase MnmE domain 2 M4S28_01320 IPR025867 MnmE, helical domain M4S28_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01320 IPR005225 Small GTP-binding protein domain M4S28_01320 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 M4S28_01325 IPR019998 Membrane insertase YidC M4S28_01325 IPR028053 Membrane insertase YidC, N-terminal M4S28_01325 IPR028055 Membrane insertase YidC/Oxa1, C-terminal M4S28_01325 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 M4S28_01325 IPR038221 YidC, periplasmic domain superfamily M4S28_01325 IPR038210 Membrane insertase YidC, periplasmic domain M4S28_01330 IPR002696 Putative membrane protein insertion efficiency factor M4S28_01335 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_01335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_01335 IPR000100 Ribonuclease P M4S28_01335 IPR020539 Ribonuclease P, conserved site M4S28_01340 IPR000271 Ribosomal protein L34 M4S28_01340 IPR020939 Ribosomal protein L34, conserved site M4S28_01345 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01345 IPR017871 ABC transporter, conserved site M4S28_01345 IPR003439 ABC transporter-like M4S28_01345 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M4S28_01345 IPR003593 AAA+ ATPase domain M4S28_01350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_01350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_01350 IPR035906 MetI-like superfamily M4S28_01355 IPR001320 Ionotropic glutamate receptor M4S28_01355 IPR018313 Solute-binding protein family 3, conserved site M4S28_01355 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_01360 IPR010921 Trp repressor/replication initiator M4S28_01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01360 IPR018312 Chromosomal replication control, initiator DnaA, conserved site M4S28_01360 IPR038454 DnaA, N-terminal domain superfamily M4S28_01360 IPR001957 Chromosomal replication control, initiator DnaA M4S28_01360 IPR003593 AAA+ ATPase domain M4S28_01360 IPR024633 DnaA N-terminal domain M4S28_01360 IPR020591 Chromosomal replication control, initiator DnaA-like M4S28_01360 IPR013317 Chromosomal replication initiator protein DnaA M4S28_01360 IPR013159 Chromosomal replication initiator, DnaA C-terminal M4S28_01365 IPR001001 DNA polymerase III, beta sliding clamp M4S28_01365 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal M4S28_01365 IPR022637 DNA polymerase III, beta sliding clamp, central M4S28_01365 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal M4S28_01370 IPR001238 DNA-binding, RecF M4S28_01370 IPR018078 DNA-binding, RecF, conserved site M4S28_01370 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01370 IPR003395 RecF/RecN/SMC, N-terminal M4S28_01370 IPR042174 DNA-binding RecF, domain 2 M4S28_01375 IPR034160 DNA gyrase subunit B, TOPRIM domain M4S28_01375 IPR018522 DNA topoisomerase, type IIA, conserved site M4S28_01375 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M4S28_01375 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M4S28_01375 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M4S28_01375 IPR001241 DNA topoisomerase, type IIA M4S28_01375 IPR006171 TOPRIM domain M4S28_01375 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_01375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_01375 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_01375 IPR041423 DNA gyrase subunit B insert domain M4S28_01375 IPR011557 DNA gyrase, subunit B M4S28_01375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_01375 IPR002288 DNA gyrase B subunit, C-terminal M4S28_01380 IPR002068 Alpha crystallin/Hsp20 domain M4S28_01380 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain M4S28_01380 IPR008978 HSP20-like chaperone M4S28_01380 IPR023728 Small heat shock protein IbpA M4S28_01385 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_01385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_01385 IPR004839 Aminotransferase, class I/classII M4S28_01390 IPR014635 Alpha-amylase, MalS type M4S28_01390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_01390 IPR017853 Glycoside hydrolase superfamily M4S28_01395 IPR008909 DALR anticodon binding M4S28_01395 IPR015944 Glycine-tRNA ligase, beta subunit M4S28_01395 IPR006194 Glycine-tRNA synthetase, heterodimeric M4S28_01400 IPR006194 Glycine-tRNA synthetase, heterodimeric M4S28_01400 IPR002310 Glycine-tRNA ligase, alpha subunit M4S28_01405 IPR001727 Gdt1 family M4S28_01415 IPR036868 TusA-like domain superfamily M4S28_01415 IPR022931 Sulfur carrier protein TusA M4S28_01415 IPR001455 TusA-like domain M4S28_01425 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_01425 IPR036390 Winged helix DNA-binding domain superfamily M4S28_01425 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M4S28_01425 IPR023746 Transcription regulator HTH, YidZ M4S28_01425 IPR000847 Transcription regulator HTH, LysR M4S28_01425 IPR005119 LysR, substrate-binding M4S28_01430 IPR014188 Acrylyl-CoA reductase AcuI M4S28_01430 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_01430 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_01430 IPR011032 GroES-like superfamily M4S28_01430 IPR036291 NAD(P)-binding domain superfamily M4S28_01430 IPR020843 Polyketide synthase, enoylreductase domain M4S28_01435 IPR002155 Thiolase M4S28_01435 IPR016039 Thiolase-like M4S28_01435 IPR020615 Thiolase, acyl-enzyme intermediate active site M4S28_01435 IPR020610 Thiolase, active site M4S28_01435 IPR020617 Thiolase, C-terminal M4S28_01435 IPR020613 Thiolase, conserved site M4S28_01435 IPR020616 Thiolase, N-terminal M4S28_01435 IPR012805 Acetyl-CoA C-acyltransferase FadA M4S28_01440 IPR036291 NAD(P)-binding domain superfamily M4S28_01440 IPR012799 Fatty oxidation complex, alpha subunit FadB M4S28_01440 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M4S28_01440 IPR029045 ClpP/crotonase-like domain superfamily M4S28_01440 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site M4S28_01440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_01440 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding M4S28_01440 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal M4S28_01440 IPR001753 Enoyl-CoA hydratase/isomerase M4S28_01445 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site M4S28_01445 IPR023582 Impact family M4S28_01445 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_01445 IPR036956 Impact, N-terminal domain superfamily M4S28_01445 IPR001498 Impact, N-terminal M4S28_01445 IPR015796 Impact family, bacterial/archaeal M4S28_01445 IPR035647 EF-G domain III/V-like M4S28_01445 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal M4S28_01450 IPR004772 TrkH potassium transport family M4S28_01450 IPR003445 Cation transporter M4S28_01455 IPR008254 Flavodoxin/nitric oxide synthase M4S28_01455 IPR001226 Flavodoxin, conserved site M4S28_01455 IPR026816 Flavodoxin domain M4S28_01455 IPR029039 Flavoprotein-like superfamily M4S28_01500 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_01500 IPR000847 Transcription regulator HTH, LysR M4S28_01500 IPR005119 LysR, substrate-binding M4S28_01500 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain M4S28_01500 IPR036390 Winged helix DNA-binding domain superfamily M4S28_01505 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_01505 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_01505 IPR013023 Ketol-acid reductoisomerase M4S28_01505 IPR000506 Ketol-acid reductoisomerase, C-terminal M4S28_01505 IPR013116 Ketol-acid reductoisomerase, N-terminal M4S28_01505 IPR036291 NAD(P)-binding domain superfamily M4S28_01510 IPR007475 Ubiquinone biosynthesis accessory factor UbiK M4S28_01515 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_01515 IPR001036 Acriflavin resistance protein M4S28_01520 IPR006143 RND efflux pump, membrane fusion protein M4S28_01520 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_01525 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M4S28_01525 IPR009057 Homeobox-like domain superfamily M4S28_01525 IPR001647 DNA-binding HTH domain, TetR-type M4S28_01530 IPR034739 UvrD/AddA helicase, N-terminal M4S28_01530 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01530 IPR005752 ATP-dependent DNA helicase Rep M4S28_01530 IPR014016 UvrD-like helicase, ATP-binding domain M4S28_01530 IPR014017 UvrD-like DNA helicase, C-terminal M4S28_01530 IPR013986 DExx box DNA helicase domain superfamily M4S28_01530 IPR000212 DNA helicase, UvrD/REP type M4S28_01535 IPR002323 Cytochrome c, class IE M4S28_01535 IPR009056 Cytochrome c-like domain M4S28_01535 IPR036909 Cytochrome c-like domain superfamily M4S28_01570 IPR003439 ABC transporter-like M4S28_01570 IPR017871 ABC transporter, conserved site M4S28_01570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01570 IPR003593 AAA+ ATPase domain M4S28_01575 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_01575 IPR039424 Solute-binding protein family 5 M4S28_01575 IPR000914 Solute-binding protein family 5 domain M4S28_01580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_01580 IPR035906 MetI-like superfamily M4S28_01585 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M4S28_01585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_01585 IPR035906 MetI-like superfamily M4S28_01595 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD M4S28_01595 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B M4S28_01605 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_01605 IPR023753 FAD/NAD(P)-binding domain M4S28_01605 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_01605 IPR006322 Glutathione reductase, eukaryote/bacterial M4S28_01605 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M4S28_01605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_01605 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M4S28_01610 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_01610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01610 IPR007473 Ribosomal RNA large subunit methyltransferase J M4S28_01615 IPR001567 Peptidase M3A/M3B catalytic domain M4S28_01615 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M4S28_01620 IPR036390 Winged helix DNA-binding domain superfamily M4S28_01620 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_01620 IPR011008 Dimeric alpha-beta barrel M4S28_01620 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_01620 IPR019888 Transcription regulator AsnC-type M4S28_01620 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_01620 IPR000485 AsnC-type HTH domain M4S28_01620 IPR011991 ArsR-like helix-turn-helix domain M4S28_01625 IPR000160 GGDEF domain M4S28_01625 IPR013656 PAS fold-4 M4S28_01625 IPR035965 PAS domain superfamily M4S28_01625 IPR000014 PAS domain M4S28_01625 IPR029787 Nucleotide cyclase M4S28_01625 IPR001633 EAL domain M4S28_01625 IPR035919 EAL domain superfamily M4S28_01630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01630 IPR007536 Ribosomal RNA small subunit methyltransferase J M4S28_01640 IPR004779 Carboxylate/Amino Acid/Amine Transporter M4S28_01640 IPR000620 EamA domain M4S28_01645 IPR006016 UspA M4S28_01645 IPR006015 Universal stress protein A family M4S28_01645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_01650 IPR041719 Ferritin, prokaryotic-type M4S28_01650 IPR008331 Ferritin/DPS protein domain M4S28_01650 IPR009078 Ferritin-like superfamily M4S28_01650 IPR009040 Ferritin-like diiron domain M4S28_01650 IPR012347 Ferritin-like M4S28_01650 IPR001519 Ferritin M4S28_01655 IPR019598 Universal stress protein B M4S28_01660 IPR023166 HI0933-like insert domain superfamily M4S28_01660 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_01660 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like M4S28_01670 IPR001584 Integrase, catalytic core M4S28_01670 IPR012337 Ribonuclease H-like superfamily M4S28_01670 IPR036397 Ribonuclease H superfamily M4S28_01675 IPR003593 AAA+ ATPase domain M4S28_01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01675 IPR021542 Tn7 transposition regulator TnsC M4S28_01695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_01695 IPR003356 DNA methylase, adenine-specific M4S28_01695 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M4S28_01695 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M4S28_01700 IPR000055 Restriction endonuclease, type I, HsdS M4S28_01710 IPR040980 SWI2/SNF2 ATPase M4S28_01710 IPR021810 Protein of unknown function DUF3387 M4S28_01710 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01710 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal M4S28_01710 IPR004473 Restriction endonuclease, type I, HsdR M4S28_01725 IPR008719 Nitrous oxide reductase accessory protein NosL M4S28_01730 IPR032688 ABC-2 family transporter protein M4S28_01735 IPR003593 AAA+ ATPase domain M4S28_01735 IPR003439 ABC transporter-like M4S28_01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01735 IPR017871 ABC transporter, conserved site M4S28_01740 IPR006633 Carbohydrate-binding/sugar hydrolysis domain M4S28_01740 IPR026464 Nitrous oxide reductase family maturation protein NosD M4S28_01740 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain M4S28_01740 IPR011050 Pectin lyase fold/virulence factor M4S28_01740 IPR012334 Pectin lyase fold M4S28_01740 IPR022441 Parallel beta-helix repeat-2 M4S28_01740 IPR006626 Parallel beta-helix repeat M4S28_01745 IPR015943 WD40/YVTN repeat-like-containing domain superfamily M4S28_01745 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_01745 IPR041142 Nitrous oxide reductase, propeller repeat 2 M4S28_01745 IPR041114 Nitrous oxide reductase, propeller repeat 1 M4S28_01745 IPR023644 Nitrous-oxide reductase M4S28_01745 IPR034205 Nitrous-oxide reductase, C-terminal M4S28_01745 IPR011045 Nitrous oxide reductase, N-terminal M4S28_01745 IPR008972 Cupredoxin M4S28_01745 IPR001505 Copper centre Cu(A) M4S28_01745 IPR002429 Cytochrome c oxidase subunit II-like C-terminal M4S28_01750 IPR011399 Nitrous oxide reductase expression regulator NosR M4S28_01750 IPR007329 FMN-binding M4S28_01750 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_01760 IPR003798 DNA recombination RmuC M4S28_01765 IPR004033 UbiE/COQ5 methyltransferase M4S28_01765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_01765 IPR023576 UbiE/COQ5 methyltransferase, conserved site M4S28_01770 IPR038989 Ubiquinone biosynthesis protein UbiJ M4S28_01770 IPR036527 SCP2 sterol-binding domain superfamily M4S28_01770 IPR003033 SCP2 sterol-binding domain M4S28_01775 IPR010232 Probable protein kinase UbiB M4S28_01775 IPR011009 Protein kinase-like domain superfamily M4S28_01775 IPR004147 UbiB domain M4S28_01780 IPR003369 Sec-independent protein translocase protein TatA/B/E M4S28_01780 IPR006312 Sec-independent protein translocase protein TatA/E M4S28_01785 IPR018448 Twin-arginine translocation protein TatB M4S28_01785 IPR003369 Sec-independent protein translocase protein TatA/B/E M4S28_01790 IPR002033 Sec-independent periplasmic protein translocase TatC M4S28_01790 IPR019820 Sec-independent periplasmic protein translocase, conserved site M4S28_01795 IPR032466 Metal-dependent hydrolase M4S28_01795 IPR015991 Uncharacterised hydrolase TatD-type M4S28_01795 IPR018228 Deoxyribonuclease, TatD-related, conserved site M4S28_01795 IPR001130 TatD family M4S28_01800 IPR001731 Delta-aminolevulinic acid dehydratase M4S28_01800 IPR013785 Aldolase-type TIM barrel M4S28_01800 IPR030656 Delta-aminolevulinic acid dehydratase, active site M4S28_01810 IPR036397 Ribonuclease H superfamily M4S28_01810 IPR020045 DNA polymerase I-like, H3TH domain M4S28_01810 IPR018320 DNA polymerase 1 M4S28_01810 IPR002421 5'-3' exonuclease, N-terminal M4S28_01810 IPR002562 3'-5' exonuclease domain M4S28_01810 IPR002298 DNA polymerase A M4S28_01810 IPR008918 Helix-hairpin-helix motif, class 2 M4S28_01810 IPR029060 PIN-like domain superfamily M4S28_01810 IPR012337 Ribonuclease H-like superfamily M4S28_01810 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal M4S28_01810 IPR001098 DNA-directed DNA polymerase, family A, palm domain M4S28_01810 IPR019760 DNA-directed DNA polymerase, family A, conserved site M4S28_01810 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M4S28_01820 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC M4S28_01820 IPR030393 EngB-type guanine nucleotide-binding (G) domain M4S28_01820 IPR006073 GTP binding domain M4S28_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01825 IPR009056 Cytochrome c-like domain M4S28_01825 IPR036909 Cytochrome c-like domain superfamily M4S28_01825 IPR024167 Cytochrome c4-like M4S28_01835 IPR007336 Der GTPase activator M4S28_01840 IPR019617 Domain of unknown function DUF2489 M4S28_01845 IPR010723 HemN, C-terminal M4S28_01845 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_01845 IPR007197 Radical SAM M4S28_01845 IPR006638 Elp3/MiaB/NifB M4S28_01845 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN M4S28_01845 IPR034505 Anaerobic coproporphyrinogen-III oxidase M4S28_01850 IPR001633 EAL domain M4S28_01850 IPR035919 EAL domain superfamily M4S28_01850 IPR000160 GGDEF domain M4S28_01850 IPR005330 MHYT domain M4S28_01850 IPR029787 Nucleotide cyclase M4S28_01855 IPR003593 AAA+ ATPase domain M4S28_01855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_01855 IPR025944 Sigma-54 interaction domain, conserved site M4S28_01855 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_01855 IPR001789 Signal transduction response regulator, receiver domain M4S28_01855 IPR009057 Homeobox-like domain superfamily M4S28_01855 IPR002197 DNA binding HTH domain, Fis-type M4S28_01855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01855 IPR011006 CheY-like superfamily M4S28_01855 IPR010114 DNA-binding transcriptional regulator NtrC M4S28_01855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_01860 IPR035965 PAS domain superfamily M4S28_01860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_01860 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_01860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_01860 IPR005467 Histidine kinase domain M4S28_01860 IPR000014 PAS domain M4S28_01860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_01860 IPR013767 PAS fold M4S28_01860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_01870 IPR027303 Glutamine synthetase, glycine-rich site M4S28_01870 IPR004809 Glutamine synthetase type I M4S28_01870 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M4S28_01870 IPR008146 Glutamine synthetase, catalytic domain M4S28_01870 IPR027302 Glutamine synthetase, N-terminal conserved site M4S28_01870 IPR001637 Glutamine synthetase class-I, adenylation site M4S28_01870 IPR008147 Glutamine synthetase, beta-Grasp domain M4S28_01870 IPR036651 Glutamine synthetase, N-terminal domain superfamily M4S28_01875 IPR005225 Small GTP-binding protein domain M4S28_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01875 IPR031157 Tr-type G domain, conserved site M4S28_01875 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_01875 IPR000640 Elongation factor EFG, domain V-like M4S28_01875 IPR035647 EF-G domain III/V-like M4S28_01875 IPR006298 GTP-binding protein TypA M4S28_01875 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_01875 IPR042116 GTP-binding protein TypA/BipA, C-terminal M4S28_01875 IPR035651 BipA, domain V M4S28_01875 IPR000795 Transcription factor, GTP-binding domain M4S28_01890 IPR023679 Uncharacterised protein family UPF0761, bacterial M4S28_01890 IPR017039 Virulence factor BrkB M4S28_01895 IPR003732 D-aminoacyl-tRNA deacylase DTD M4S28_01895 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M4S28_01900 IPR012660 Thioesterase, putative M4S28_01900 IPR016181 Acyl-CoA N-acyltransferase M4S28_01900 IPR029069 HotDog domain superfamily M4S28_01900 IPR000182 GNAT domain M4S28_01910 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising M4S28_01910 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal M4S28_01910 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal M4S28_01910 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site M4S28_01915 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily M4S28_01915 IPR016153 Heat shock protein Hsp33, N-terminal M4S28_01915 IPR016154 Heat shock protein Hsp33, C-terminal M4S28_01915 IPR000397 Heat shock protein Hsp33 M4S28_01920 IPR036986 RNA-binding S4 domain superfamily M4S28_01920 IPR002942 RNA-binding S4 domain M4S28_01920 IPR025708 Heat shock protein 15 M4S28_01925 IPR036034 PDZ superfamily M4S28_01925 IPR001639 Type II secretion system protein C M4S28_01925 IPR024961 Type II secretion system protein C, N-terminal M4S28_01930 IPR013356 Type II secretion system GspD M4S28_01930 IPR004846 Type II/III secretion system M4S28_01930 IPR038591 NolW-like superfamily M4S28_01930 IPR005644 NolW-like M4S28_01930 IPR001775 GspD/PilQ family M4S28_01930 IPR004845 Type II secretion system GspD, conserved site M4S28_01935 IPR037257 General secretory system II, protein E, N-terminal superfamily M4S28_01935 IPR013369 Type II secretion system GspE M4S28_01935 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_01935 IPR001482 Type II/IV secretion system protein M4S28_01935 IPR042181 Type II secretion system, protein E, N-terminal M4S28_01935 IPR003593 AAA+ ATPase domain M4S28_01940 IPR011850 General secretion pathway protein F M4S28_01940 IPR001992 Type II secretion system conserved site M4S28_01940 IPR018076 Type II secretion system F domain M4S28_01940 IPR042094 Type II secretion system F domain superfamily M4S28_01940 IPR003004 GspF/PilC family M4S28_01945 IPR000983 Bacterial general secretion pathway protein G-type pilin M4S28_01945 IPR012902 Prokaryotic N-terminal methylation site M4S28_01945 IPR013545 Type II secretion system protein G M4S28_01945 IPR010054 General secretion pathway protein G M4S28_01950 IPR002416 Type II secretion system protein H M4S28_01950 IPR012902 Prokaryotic N-terminal methylation site M4S28_01950 IPR022346 General secretion pathway, GspH M4S28_01955 IPR012902 Prokaryotic N-terminal methylation site M4S28_01955 IPR003413 Type II secretion system protein I domain M4S28_01955 IPR010052 Type II secretion system protein I M4S28_01960 IPR012902 Prokaryotic N-terminal methylation site M4S28_01960 IPR010055 Type II secretion system protein J M4S28_01965 IPR038072 GspK, central domain superfamily M4S28_01965 IPR005628 General secretion pathway protein K M4S28_01970 IPR025691 GspL periplasmic domain M4S28_01970 IPR024230 GspL, cytoplasmic actin-ATPase-like domain M4S28_01970 IPR007812 Type II secretion system protein L M4S28_01975 IPR007690 Type II secretion system, protein M M4S28_01975 IPR023229 Type II secretion system protein M, periplasmic domain superfamily M4S28_01980 IPR000645 Type II secretion system protein N, conserved site M4S28_01980 IPR022792 Type II secretion system, protein N M4S28_01985 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ M4S28_01985 IPR000760 Inositol monophosphatase-like M4S28_01985 IPR020550 Inositol monophosphatase, conserved site M4S28_01985 IPR020583 Inositol monophosphatase, metal-binding site M4S28_01990 IPR020084 NUDIX hydrolase, conserved site M4S28_01990 IPR000086 NUDIX hydrolase domain M4S28_01990 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_01995 IPR000361 FeS cluster biogenesis M4S28_01995 IPR017726 Fe/S biogenesis protein NfuA M4S28_01995 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal M4S28_01995 IPR035903 HesB-like domain superfamily M4S28_01995 IPR034904 Fe-S cluster assembly domain superfamily M4S28_02000 IPR000836 Phosphoribosyltransferase domain M4S28_02000 IPR005222 Competence protein ComF M4S28_02000 IPR029057 Phosphoribosyltransferase-like M4S28_02005 IPR000073 Alpha/beta hydrolase fold-1 M4S28_02005 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase M4S28_02005 IPR029058 Alpha/Beta hydrolase fold M4S28_02015 IPR041692 HHH domain 9 M4S28_02015 IPR037027 YqgF/RNase H-like domain superfamily M4S28_02015 IPR006641 YqgF/RNase H-like domain M4S28_02015 IPR032639 Tex protein, YqgF-like domain M4S28_02015 IPR018974 Tex-like protein, N-terminal M4S28_02015 IPR023319 Tex-like protein, HTH domain superfamily M4S28_02015 IPR012340 Nucleic acid-binding, OB-fold M4S28_02015 IPR003029 S1 domain M4S28_02015 IPR012337 Ribonuclease H-like superfamily M4S28_02015 IPR023323 Tex-like domain superfamily M4S28_02015 IPR022967 RNA-binding domain, S1 M4S28_02015 IPR010994 RuvA domain 2-like M4S28_02020 IPR006358 Transcription elongation factor GreB M4S28_02020 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal M4S28_02020 IPR023459 Transcription elongation factor GreA/GreB family M4S28_02020 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily M4S28_02020 IPR028624 Transcription elongation factor GreA/GreB M4S28_02020 IPR018151 Transcription elongation factor, GreA/GreB, conserved site M4S28_02020 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M4S28_02020 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M4S28_02025 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_02025 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_02025 IPR001789 Signal transduction response regulator, receiver domain M4S28_02025 IPR039420 Transcriptional regulatory protein WalR-like M4S28_02025 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_02025 IPR011006 CheY-like superfamily M4S28_02030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_02030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_02030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_02030 IPR005467 Histidine kinase domain M4S28_02030 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_02030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_02030 IPR003660 HAMP domain M4S28_02035 IPR011545 DEAD/DEAH box helicase domain M4S28_02035 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_02035 IPR001650 Helicase, C-terminal M4S28_02035 IPR012340 Nucleic acid-binding, OB-fold M4S28_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02035 IPR033454 RecG, wedge domain M4S28_02035 IPR004609 ATP-dependent DNA helicase RecG M4S28_02040 IPR033655 RelA, TGS domain M4S28_02040 IPR012676 TGS-like M4S28_02040 IPR004095 TGS M4S28_02040 IPR003607 HD/PDEase domain M4S28_02040 IPR004811 RelA/SpoT family M4S28_02040 IPR002912 ACT domain M4S28_02040 IPR007685 RelA/SpoT M4S28_02040 IPR012675 Beta-grasp domain superfamily M4S28_02045 IPR036161 RPB6/omega subunit-like superfamily M4S28_02045 IPR006110 RNA polymerase, subunit omega/K/RPB6 M4S28_02045 IPR012293 RNA polymerase subunit, RPB6/omega M4S28_02045 IPR003716 DNA-directed RNA polymerase, omega subunit M4S28_02050 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M4S28_02050 IPR020590 Guanylate kinase, conserved site M4S28_02050 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02050 IPR017665 Guanylate kinase M4S28_02050 IPR008144 Guanylate kinase-like domain M4S28_02055 IPR026033 Azaguanine-like transporters M4S28_02055 IPR006043 Xanthine/uracil/vitamin C permease M4S28_02070 IPR012156 Cold shock, CspA M4S28_02070 IPR011129 Cold shock domain M4S28_02070 IPR019844 Cold-shock (CSD) domain M4S28_02070 IPR002059 Cold-shock protein, DNA-binding M4S28_02070 IPR012340 Nucleic acid-binding, OB-fold M4S28_02075 IPR013551 Domain of unknown function DUF1732 M4S28_02075 IPR005229 Conserved hypothetical protein CHP00255 M4S28_02075 IPR013527 YicC-like, N-terminal M4S28_02080 IPR001247 Exoribonuclease, phosphorolytic domain 1 M4S28_02080 IPR015847 Exoribonuclease, phosphorolytic domain 2 M4S28_02080 IPR036345 Exoribonuclease, PH domain 2 superfamily M4S28_02080 IPR027408 PNPase/RNase PH domain superfamily M4S28_02080 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_02080 IPR002381 Ribonuclease PH, bacterial-type M4S28_02080 IPR018336 Ribonuclease PH, conserved site M4S28_02085 IPR029057 Phosphoribosyltransferase-like M4S28_02085 IPR023031 Orotate phosphoribosyltransferase M4S28_02085 IPR004467 Orotate phosphoribosyl transferase domain M4S28_02085 IPR000836 Phosphoribosyltransferase domain M4S28_02090 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase M4S28_02090 IPR004960 Bacterial lipid A biosynthesis acyltransferase M4S28_02095 IPR023769 Nucleoid occlusion factor SlmA M4S28_02095 IPR001647 DNA-binding HTH domain, TetR-type M4S28_02095 IPR009057 Homeobox-like domain superfamily M4S28_02095 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_02100 IPR035929 CoaB-like superfamily M4S28_02100 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC M4S28_02100 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal M4S28_02100 IPR036551 Flavin prenyltransferase-like M4S28_02100 IPR003382 Flavoprotein M4S28_02105 IPR037518 MPN domain M4S28_02105 IPR025657 RadC-like JAB domain M4S28_02105 IPR010994 RuvA domain 2-like M4S28_02105 IPR001405 Uncharacterised protein family UPF0758 M4S28_02105 IPR020891 Uncharacterised protein family UPF0758, conserved site M4S28_02110 IPR001383 Ribosomal protein L28 M4S28_02110 IPR034704 L28p-like M4S28_02110 IPR037147 Ribosomal protein L28/L24 superfamily M4S28_02110 IPR026569 Ribosomal protein L28/L24 M4S28_02115 IPR038584 Ribosomal protein L33 superfamily M4S28_02115 IPR001705 Ribosomal protein L33 M4S28_02115 IPR018264 Ribosomal protein L33, conserved site M4S28_02115 IPR011332 Zinc-binding ribosomal protein M4S28_02125 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type M4S28_02125 IPR010979 Ribosomal protein S13-like, H2TH M4S28_02125 IPR010663 Zinc finger, FPG/IleRS-type M4S28_02125 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain M4S28_02125 IPR020629 Formamidopyrimidine-DNA glycosylase M4S28_02125 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site M4S28_02125 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding M4S28_02125 IPR035937 MutM-like, N-terminal M4S28_02130 IPR001509 NAD-dependent epimerase/dehydratase M4S28_02130 IPR036291 NAD(P)-binding domain superfamily M4S28_02140 IPR004821 Cytidyltransferase-like domain M4S28_02140 IPR001980 Phosphopantetheine adenylyltransferase M4S28_02140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_02145 IPR002201 Glycosyl transferase, family 9 M4S28_02150 IPR022826 3-deoxy-D-manno-octulosonic acid kinase M4S28_02150 IPR011009 Protein kinase-like domain superfamily M4S28_02150 IPR000719 Protein kinase domain M4S28_02155 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal M4S28_02155 IPR039901 3-deoxy-D-manno-octulosonic acid transferase M4S28_02155 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily M4S28_02165 IPR001173 Glycosyltransferase 2-like M4S28_02165 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_02180 IPR001296 Glycosyl transferase, family 1 M4S28_02180 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M4S28_02185 IPR001451 Hexapeptide repeat M4S28_02185 IPR018357 Hexapeptide transferase, conserved site M4S28_02185 IPR011004 Trimeric LpxA-like superfamily M4S28_02200 IPR004960 Bacterial lipid A biosynthesis acyltransferase M4S28_02200 IPR011921 Lipid A biosynthesis myristoyltransferase M4S28_02205 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase M4S28_02205 IPR036291 NAD(P)-binding domain superfamily M4S28_02205 IPR001509 NAD-dependent epimerase/dehydratase M4S28_02210 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_02210 IPR036291 NAD(P)-binding domain superfamily M4S28_02210 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M4S28_02210 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M4S28_02210 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M4S28_02210 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M4S28_02210 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M4S28_02210 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type M4S28_02215 IPR009057 Homeobox-like domain superfamily M4S28_02215 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M4S28_02215 IPR001647 DNA-binding HTH domain, TetR-type M4S28_02215 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_02215 IPR013571 Transcription regulator QacR, C-terminal M4S28_02220 IPR011055 Duplicated hybrid motif M4S28_02220 IPR016047 Peptidase M23 M4S28_02225 IPR018357 Hexapeptide transferase, conserved site M4S28_02225 IPR010493 Serine acetyltransferase, N-terminal M4S28_02225 IPR042122 Serine acetyltransferase, N-terminal domain superfamily M4S28_02225 IPR011004 Trimeric LpxA-like superfamily M4S28_02225 IPR001451 Hexapeptide repeat M4S28_02225 IPR005881 Serine O-acetyltransferase M4S28_02230 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_02230 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_02230 IPR036291 NAD(P)-binding domain superfamily M4S28_02230 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal M4S28_02230 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal M4S28_02230 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent M4S28_02235 IPR035958 SecB-like superfamily M4S28_02235 IPR003708 Bacterial protein export chaperone SecB M4S28_02240 IPR036873 Rhodanese-like domain superfamily M4S28_02240 IPR001763 Rhodanese-like domain M4S28_02260 IPR010344 Exopolysaccharide biosynthesis protein YbjH M4S28_02265 IPR003715 Polysaccharide export protein M4S28_02265 IPR019554 Soluble ligand binding domain M4S28_02265 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain M4S28_02270 IPR023485 Phosphotyrosine protein phosphatase I M4S28_02270 IPR036196 Phosphotyrosine protein phosphatase I superfamily M4S28_02270 IPR017867 Protein-tyrosine phosphatase, low molecular weight M4S28_02275 IPR025669 AAA domain M4S28_02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02275 IPR003856 Polysaccharide chain length determinant N-terminal domain M4S28_02275 IPR005702 Exopolysaccharide synthesis protein M4S28_02275 IPR032807 Tyrosine kinase, G-rich domain M4S28_02280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_02280 IPR017476 UDP-glucose/GDP-mannose dehydrogenase M4S28_02280 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal M4S28_02280 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily M4S28_02280 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation M4S28_02280 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal M4S28_02280 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase M4S28_02280 IPR036291 NAD(P)-binding domain superfamily M4S28_02285 IPR001509 NAD-dependent epimerase/dehydratase M4S28_02285 IPR036291 NAD(P)-binding domain superfamily M4S28_02295 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain M4S28_02295 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) M4S28_02295 IPR036291 NAD(P)-binding domain superfamily M4S28_02300 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M4S28_02300 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_02300 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_02300 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_02305 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_02305 IPR003329 Acylneuraminate cytidylyltransferase M4S28_02305 IPR020039 Pseudaminic acid cytidylyltransferase M4S28_02315 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal M4S28_02315 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily M4S28_02315 IPR013785 Aldolase-type TIM barrel M4S28_02315 IPR013132 N-acetylneuraminic acid synthase, N-terminal M4S28_02315 IPR020030 Pseudaminic acid biosynthesis, PseI M4S28_02315 IPR013974 SAF domain M4S28_02320 IPR018317 Queuosine biosynthesis protein QueC M4S28_02320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_02325 IPR029062 Class I glutamine amidotransferase-like M4S28_02325 IPR010139 Imidazole glycerol phosphate synthase, subunit H M4S28_02325 IPR017926 Glutamine amidotransferase M4S28_02365 IPR006426 Asparagine synthase, glutamine-hydrolyzing M4S28_02365 IPR001962 Asparagine synthase M4S28_02365 IPR033738 Asparagine synthase, N-terminal domain M4S28_02365 IPR017932 Glutamine amidotransferase type 2 domain M4S28_02365 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_02370 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region M4S28_02370 IPR011004 Trimeric LpxA-like superfamily M4S28_02370 IPR018357 Hexapeptide transferase, conserved site M4S28_02370 IPR001451 Hexapeptide repeat M4S28_02370 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD M4S28_02375 IPR002656 Acyltransferase 3 M4S28_02375 IPR036514 SGNH hydrolase superfamily M4S28_02380 IPR001296 Glycosyl transferase, family 1 M4S28_02380 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M4S28_02385 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase M4S28_02385 IPR000715 Glycosyl transferase, family 4 M4S28_02390 IPR011258 BPG-independent PGAM, N-terminal M4S28_02390 IPR006124 Metalloenzyme M4S28_02390 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent M4S28_02390 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_02390 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily M4S28_02405 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M4S28_02405 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M4S28_02405 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M4S28_02405 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M4S28_02405 IPR023546 Methylated-DNA--protein-cysteine methyltransferase M4S28_02405 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M4S28_02405 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_02410 IPR002528 Multi antimicrobial extrusion protein M4S28_02415 IPR003856 Polysaccharide chain length determinant N-terminal domain M4S28_02415 IPR032895 ECA polysaccharide chain length modulation protein WzzE M4S28_02420 IPR011032 GroES-like superfamily M4S28_02420 IPR018369 Chaperonin GroES, conserved site M4S28_02420 IPR037124 GroES chaperonin superfamily M4S28_02420 IPR020818 GroES chaperonin family M4S28_02425 IPR027413 GroEL-like equatorial domain superfamily M4S28_02425 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M4S28_02425 IPR027409 GroEL-like apical domain superfamily M4S28_02425 IPR018370 Chaperonin Cpn60, conserved site M4S28_02425 IPR002423 Chaperonin Cpn60/TCP-1 family M4S28_02425 IPR001844 Chaperonin Cpn60 M4S28_02440 IPR029016 GAF-like domain superfamily M4S28_02440 IPR000160 GGDEF domain M4S28_02440 IPR029787 Nucleotide cyclase M4S28_02445 IPR003416 MgtC/SapB/SrpB/YhiD family M4S28_02450 IPR013545 Type II secretion system protein G M4S28_02450 IPR010054 General secretion pathway protein G M4S28_02450 IPR012902 Prokaryotic N-terminal methylation site M4S28_02450 IPR000983 Bacterial general secretion pathway protein G-type pilin M4S28_02455 IPR007197 Radical SAM M4S28_02455 IPR022462 Lysine-2,3-aminomutase-like M4S28_02455 IPR013785 Aldolase-type TIM barrel M4S28_02455 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase M4S28_02460 IPR020599 Translation elongation factor P/YeiP M4S28_02460 IPR014722 Ribosomal protein L2, domain 2 M4S28_02460 IPR012340 Nucleic acid-binding, OB-fold M4S28_02460 IPR015365 Elongation factor P, C-terminal M4S28_02460 IPR013185 Translation elongation factor, KOW-like M4S28_02460 IPR001059 Translation elongation factor P/YeiP, central M4S28_02460 IPR013852 Translation elongation factor P/YeiP, conserved site M4S28_02460 IPR011768 Translation elongation factor P M4S28_02460 IPR008991 Translation protein SH3-like domain superfamily M4S28_02465 IPR003418 Fumarate reductase, subunit D M4S28_02465 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M4S28_02470 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M4S28_02470 IPR003510 Fumarate reductase, subunit C M4S28_02475 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal M4S28_02475 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein M4S28_02475 IPR009051 Alpha-helical ferredoxin M4S28_02475 IPR012675 Beta-grasp domain superfamily M4S28_02475 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_02475 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M4S28_02475 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_02475 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_02475 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_02480 IPR005884 Fumarate reductase, flavoprotein subunit M4S28_02480 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M4S28_02480 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M4S28_02480 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit M4S28_02480 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_02480 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M4S28_02480 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M4S28_02480 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site M4S28_02485 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_02485 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M4S28_02485 IPR004525 Elongation factor P--(R)-beta-lysine ligase M4S28_02495 IPR003660 HAMP domain M4S28_02495 IPR033479 Double Cache domain 1 M4S28_02495 IPR029151 Periplasmic sensor-like domain superfamily M4S28_02495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_02500 IPR031312 Sodium/sulphate symporter, conserved site M4S28_02500 IPR006037 Regulator of K+ conductance, C-terminal M4S28_02500 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_02500 IPR004680 Citrate transporter-like domain M4S28_02505 IPR003817 Phosphatidylserine decarboxylase-related M4S28_02505 IPR033177 Phosphatidylserine decarboxylase M4S28_02505 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 M4S28_02510 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M4S28_02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02510 IPR004881 Ribosome biogenesis GTPase RsgA M4S28_02510 IPR010914 RsgA GTPase domain M4S28_02515 IPR036397 Ribonuclease H superfamily M4S28_02515 IPR022894 Oligoribonuclease M4S28_02515 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_02515 IPR012337 Ribonuclease H-like superfamily M4S28_02605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_02605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_02605 IPR013542 Domain of unknown function DUF1730 M4S28_02605 IPR004453 Epoxyqueuosine reductase QueG M4S28_02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02610 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE M4S28_02615 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain M4S28_02620 IPR020667 DNA mismatch repair protein, MutL M4S28_02620 IPR002099 DNA mismatch repair protein family, N-terminal M4S28_02620 IPR013507 DNA mismatch repair protein, S5 domain 2-like M4S28_02620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_02620 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms M4S28_02620 IPR014790 MutL, C-terminal, dimerisation M4S28_02620 IPR014762 DNA mismatch repair, conserved site M4S28_02620 IPR042120 MutL, C-terminal domain, dimerisation subdomain M4S28_02620 IPR042121 MutL, C-terminal domain, regulatory subdomain M4S28_02620 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_02620 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_02620 IPR037198 MutL, C-terminal domain superfamily M4S28_02625 IPR039657 Dimethylallyltransferase M4S28_02625 IPR018022 IPP transferase M4S28_02625 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02630 IPR005001 RNA-binding protein Hfq M4S28_02630 IPR010920 LSM domain superfamily M4S28_02635 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02635 IPR025121 GTPase HflX, N-terminal M4S28_02635 IPR016496 GTPase HflX M4S28_02635 IPR042108 GTPase HflX, N-terminal domain superfamily M4S28_02635 IPR032305 GTP-binding protein, middle domain M4S28_02635 IPR030394 HflX-type guanine nucleotide-binding (G) domain M4S28_02635 IPR006073 GTP binding domain M4S28_02635 IPR035647 EF-G domain III/V-like M4S28_02640 IPR020980 Menbrane protein HflK, N-terminal M4S28_02640 IPR001972 Stomatin family M4S28_02640 IPR036013 Band 7/SPFH domain superfamily M4S28_02640 IPR001107 Band 7 domain M4S28_02640 IPR010201 HflK M4S28_02645 IPR001107 Band 7 domain M4S28_02645 IPR036013 Band 7/SPFH domain superfamily M4S28_02645 IPR010200 HflC M4S28_02650 IPR019201 Protein of unknown function DUF2065 M4S28_02655 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02655 IPR001114 Adenylosuccinate synthetase M4S28_02655 IPR042111 Adenylosuccinate synthetase, domain 3 M4S28_02655 IPR042109 Adenylosuccinate synthetase, domain 1 M4S28_02655 IPR018220 Adenylosuccinate synthase, GTP-binding site M4S28_02655 IPR042110 Adenylosuccinate synthetase, domain 2 M4S28_02655 IPR033128 Adenylosuccinate synthase, active site M4S28_02660 IPR006597 Sel1-like repeat M4S28_02660 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_02665 IPR006680 Amidohydrolase-related M4S28_02665 IPR023512 Deaminase MtaD/DadD M4S28_02665 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_02665 IPR032466 Metal-dependent hydrolase M4S28_02670 IPR003029 S1 domain M4S28_02670 IPR011129 Cold shock domain M4S28_02670 IPR040476 RNase II/RNase R, cold shock domain M4S28_02670 IPR012340 Nucleic acid-binding, OB-fold M4S28_02670 IPR013223 Ribonuclease B, N-terminal OB domain M4S28_02670 IPR013668 Ribonuclease R winged-helix domain M4S28_02670 IPR001900 Ribonuclease II/R M4S28_02670 IPR022966 Ribonuclease II/R, conserved site M4S28_02670 IPR004476 Ribonuclease II/ribonuclease R M4S28_02670 IPR011805 Ribonuclease R M4S28_02670 IPR022967 RNA-binding domain, S1 M4S28_02675 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB M4S28_02675 IPR029064 50S ribosomal protein L30e-like M4S28_02675 IPR004441 RNA methyltransferase TrmH family M4S28_02675 IPR001537 tRNA/rRNA methyltransferase, SpoU type M4S28_02675 IPR013123 RNA 2-O ribose methyltransferase, substrate binding M4S28_02675 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_02675 IPR029028 Alpha/beta knot methyltransferases M4S28_02680 IPR035980 Ribosomal protein S6 superfamily M4S28_02680 IPR020814 Ribosomal protein S6, plastid/chloroplast M4S28_02680 IPR000529 Ribosomal protein S6 M4S28_02680 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M4S28_02685 IPR001648 Ribosomal protein S18 M4S28_02685 IPR036870 Ribosomal protein S18 superfamily M4S28_02685 IPR018275 Ribosomal protein S18, conserved site M4S28_02690 IPR000244 Ribosomal protein L9 M4S28_02690 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M4S28_02690 IPR020594 Ribosomal protein L9, bacteria/chloroplast M4S28_02690 IPR020069 Ribosomal protein L9, C-terminal M4S28_02690 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M4S28_02690 IPR036935 Ribosomal protein L9, N-terminal domain superfamily M4S28_02690 IPR020070 Ribosomal protein L9, N-terminal M4S28_02700 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M4S28_02700 IPR007693 DNA helicase, DnaB-like, N-terminal M4S28_02700 IPR007694 DNA helicase, DnaB-like, C-terminal M4S28_02700 IPR007692 DNA helicase, DnaB type M4S28_02700 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily M4S28_02700 IPR003593 AAA+ ATPase domain M4S28_02700 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02705 IPR029066 PLP-binding barrel M4S28_02705 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site M4S28_02705 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M4S28_02705 IPR011079 Alanine racemase, C-terminal M4S28_02705 IPR001608 Alanine racemase, N-terminal M4S28_02705 IPR000821 Alanine racemase M4S28_02715 IPR001602 Uncharacterised protein family UPF0047 M4S28_02715 IPR035917 YjbQ-like superfamily M4S28_02720 IPR001672 Phosphoglucose isomerase (PGI) M4S28_02720 IPR035482 Phosphoglucose isomerase, SIS domain 2 M4S28_02720 IPR023096 Phosphoglucose isomerase, C-terminal M4S28_02720 IPR018189 Phosphoglucose isomerase, conserved site M4S28_02720 IPR035476 Phosphoglucose isomerase, SIS domain 1 M4S28_02725 IPR002559 Transposase, IS4-like M4S28_02725 IPR012337 Ribonuclease H-like superfamily M4S28_02725 IPR024473 Transposase, IS4, N-terminal M4S28_02735 IPR036390 Winged helix DNA-binding domain superfamily M4S28_02735 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_02735 IPR002481 Ferric-uptake regulator M4S28_02755 IPR013785 Aldolase-type TIM barrel M4S28_02755 IPR018517 tRNA-dihydrouridine synthase, conserved site M4S28_02755 IPR001269 tRNA-dihydrouridine synthase M4S28_02755 IPR004653 tRNA-dihydrouridine(20/20a) synthase M4S28_02755 IPR035587 DUS-like, FMN-binding domain M4S28_02760 IPR014318 Phage shock protein, PspG M4S28_02775 IPR029039 Flavoprotein-like superfamily M4S28_02775 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_02775 IPR017938 Riboflavin synthase-like beta-barrel M4S28_02775 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain M4S28_02775 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding M4S28_02775 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria M4S28_02775 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_02775 IPR001094 Flavodoxin-like M4S28_02775 IPR008254 Flavodoxin/nitric oxide synthase M4S28_02775 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M4S28_02775 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_02775 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily M4S28_02780 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M4S28_02780 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M4S28_02780 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M4S28_02780 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit M4S28_02780 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M4S28_02785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_02785 IPR011800 Phosphoadenosine phosphosulphate reductase CysH M4S28_02785 IPR002500 Phosphoadenosine phosphosulphate reductase M4S28_02785 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase M4S28_02860 IPR038770 Sodium/solute symporter superfamily M4S28_02860 IPR018422 Cation/H+ exchanger, CPA1 family M4S28_02860 IPR006153 Cation/H+ exchanger M4S28_02865 IPR003726 Homocysteine-binding domain M4S28_02865 IPR036724 Cobalamin-binding domain superfamily M4S28_02865 IPR011005 Dihydropteroate synthase-like M4S28_02865 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain M4S28_02865 IPR006158 Cobalamin (vitamin B12)-binding domain M4S28_02865 IPR036589 Homocysteine-binding domain superfamily M4S28_02865 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily M4S28_02865 IPR004223 Vitamin B12-dependent methionine synthase, activation domain M4S28_02865 IPR000489 Pterin-binding domain M4S28_02865 IPR036594 Methionine synthase domain M4S28_02865 IPR011822 Cobalamin-dependent methionine synthase M4S28_02865 IPR033706 Methionine synthase, B12-binding domain M4S28_02870 IPR002912 ACT domain M4S28_02870 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain M4S28_02870 IPR018042 Aspartate kinase, conserved site M4S28_02870 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_02870 IPR005260 Aspartate kinase, monofunctional class M4S28_02870 IPR001341 Aspartate kinase M4S28_02870 IPR036393 Acetylglutamate kinase-like superfamily M4S28_02875 IPR000192 Aminotransferase class V domain M4S28_02875 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M4S28_02875 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase M4S28_02875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_02875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_02875 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_02885 IPR017871 ABC transporter, conserved site M4S28_02885 IPR004602 UvrABC system subunit A M4S28_02885 IPR041552 UvrA DNA-binding domain M4S28_02885 IPR041102 UvrA, interaction domain M4S28_02885 IPR003439 ABC transporter-like M4S28_02885 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02890 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_02890 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type M4S28_02890 IPR005835 Nucleotidyl transferase domain M4S28_02895 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_02895 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_02895 IPR000792 Transcription regulator LuxR, C-terminal M4S28_02900 IPR012340 Nucleic acid-binding, OB-fold M4S28_02900 IPR011344 Single-stranded DNA-binding protein M4S28_02900 IPR000424 Primosome PriB/single-strand DNA-binding M4S28_02905 IPR001633 EAL domain M4S28_02905 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 M4S28_02905 IPR000160 GGDEF domain M4S28_02905 IPR029787 Nucleotide cyclase M4S28_02905 IPR035919 EAL domain superfamily M4S28_02925 IPR004846 Type II/III secretion system M4S28_02925 IPR013356 Type II secretion system GspD M4S28_02925 IPR001775 GspD/PilQ family M4S28_02925 IPR038591 NolW-like superfamily M4S28_02925 IPR005644 NolW-like M4S28_02930 IPR003593 AAA+ ATPase domain M4S28_02930 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02930 IPR002477 Peptidoglycan binding-like M4S28_02930 IPR036365 PGBD-like superfamily M4S28_02930 IPR036366 PGBD superfamily M4S28_02940 IPR007831 General secretory system II, protein E, N-terminal M4S28_02940 IPR042181 Type II secretion system, protein E, N-terminal M4S28_02940 IPR037257 General secretory system II, protein E, N-terminal superfamily M4S28_02940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_02940 IPR013374 ATPase, type IV, pilus assembly, PilB M4S28_02940 IPR001482 Type II/IV secretion system protein M4S28_02940 IPR003593 AAA+ ATPase domain M4S28_02945 IPR003004 GspF/PilC family M4S28_02945 IPR018076 Type II secretion system F domain M4S28_02945 IPR042094 Type II secretion system F domain superfamily M4S28_02955 IPR012902 Prokaryotic N-terminal methylation site M4S28_02960 IPR012902 Prokaryotic N-terminal methylation site M4S28_02990 IPR004753 Cell shape determining protein MreB M4S28_02995 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 M4S28_02995 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 M4S28_02995 IPR007221 Rod shape-determining protein MreC M4S28_03000 IPR007227 Cell shape-determining protein MreD M4S28_03000 IPR026034 Cell shape-determining protein MreD, proteobacterial type M4S28_03005 IPR029001 Inosine triphosphate pyrophosphatase-like M4S28_03005 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein M4S28_03010 IPR003029 S1 domain M4S28_03010 IPR012340 Nucleic acid-binding, OB-fold M4S28_03010 IPR004659 Ribonuclease E/G M4S28_03010 IPR022967 RNA-binding domain, S1 M4S28_03010 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G M4S28_03020 IPR003010 Carbon-nitrogen hydrolase M4S28_03020 IPR036526 Carbon-nitrogen hydrolase superfamily M4S28_03020 IPR001110 Uncharacterised protein family UPF0012, conserved site M4S28_03025 IPR025502 TldD M4S28_03025 IPR002510 Metalloprotease TldD/PmbA M4S28_03025 IPR035068 Metalloprotease TldD/PmbA, N-terminal M4S28_03025 IPR036059 Metalloprotease TldD/PmbA superfamily M4S28_03030 IPR002716 PIN domain M4S28_03030 IPR003714 PhoH-like protein M4S28_03030 IPR029060 PIN-like domain superfamily M4S28_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03035 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_03035 IPR040766 RapA, N-terminal Tudor-like domain 2 M4S28_03035 IPR040765 RapA, N-terminal Tudor like domain 1 M4S28_03035 IPR000330 SNF2-related, N-terminal domain M4S28_03035 IPR022737 RNA polymerase recycling, bacterial, C-terminal M4S28_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03035 IPR023949 RNA polymerase-associated protein RapA M4S28_03035 IPR001650 Helicase, C-terminal M4S28_03035 IPR038718 SNF2-like, N-terminal domain superfamily M4S28_03045 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_03045 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_03045 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_03050 IPR036291 NAD(P)-binding domain superfamily M4S28_03050 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M4S28_03050 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M4S28_03050 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M4S28_03055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_03055 IPR006015 Universal stress protein A family M4S28_03055 IPR006016 UspA M4S28_03070 IPR001669 Arginine repressor M4S28_03070 IPR020899 Arginine repressor, C-terminal M4S28_03070 IPR020900 Arginine repressor, DNA-binding domain M4S28_03070 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03070 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03070 IPR036251 Arginine repressor, C-terminal domain superfamily M4S28_03075 IPR001557 L-lactate/malate dehydrogenase M4S28_03075 IPR022383 Lactate/malate dehydrogenase, C-terminal M4S28_03075 IPR001236 Lactate/malate dehydrogenase, N-terminal M4S28_03075 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal M4S28_03075 IPR001252 Malate dehydrogenase, active site M4S28_03075 IPR010097 Malate dehydrogenase, type 1 M4S28_03075 IPR023958 Malate dehydrogenase, type 1, bacterial M4S28_03075 IPR036291 NAD(P)-binding domain superfamily M4S28_03085 IPR033749 Polyprenyl synthetase, conserved site M4S28_03085 IPR000092 Polyprenyl synthetase M4S28_03085 IPR008949 Isoprenoid synthase domain superfamily M4S28_03090 IPR036164 L21-like superfamily M4S28_03090 IPR028909 Ribosomal protein L21-like M4S28_03090 IPR001787 Ribosomal protein L21 M4S28_03090 IPR018258 Ribosomal protein L21, conserved site M4S28_03095 IPR001684 Ribosomal protein L27 M4S28_03095 IPR018261 Ribosomal protein L27, conserved site M4S28_03100 IPR006073 GTP binding domain M4S28_03100 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03100 IPR006169 GTP1/OBG domain M4S28_03100 IPR036726 GTP1/OBG domain superfamily M4S28_03100 IPR014100 GTP-binding protein Obg/CgtA M4S28_03100 IPR031167 OBG-type guanine nucleotide-binding (G) domain M4S28_03100 IPR006074 GTP1/OBG, conserved site M4S28_03100 IPR035101 GTP-binding protein, Obg-type M4S28_03105 IPR010619 Putative threonine/serine exporter M4S28_03110 IPR024528 Threonine/Serine exporter, ThrE M4S28_03110 IPR020914 Uncharacterised protein family UPF0442 M4S28_03115 IPR012259 Dihydrofolate reductase M4S28_03115 IPR024072 Dihydrofolate reductase-like domain superfamily M4S28_03115 IPR017925 Dihydrofolate reductase conserved site M4S28_03115 IPR001796 Dihydrofolate reductase domain M4S28_03120 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) M4S28_03120 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_03120 IPR029052 Metallo-dependent phosphatase-like M4S28_03125 IPR036767 ApaG domain superfamily M4S28_03125 IPR007474 ApaG domain M4S28_03125 IPR023065 Uncharacterised protein family ApaG M4S28_03130 IPR023165 rRNA adenine dimethylase-like M4S28_03130 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site M4S28_03130 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal M4S28_03130 IPR011530 Ribosomal RNA adenine dimethylase M4S28_03130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_03130 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm M4S28_03135 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase M4S28_03135 IPR005255 PdxA family M4S28_03140 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M4S28_03140 IPR023034 Peptidyl-prolyl isomerase SurA M4S28_03140 IPR027304 Trigger factor/SurA domain superfamily M4S28_03140 IPR015391 SurA N-terminal M4S28_03145 IPR020889 LPS-assembly protein LptD M4S28_03145 IPR007543 LptD, C-terminal M4S28_03145 IPR005653 Organic solvent tolerance-like, N-terminal M4S28_03150 IPR007791 Co-chaperone DjlA, N-terminal M4S28_03150 IPR001623 DnaJ domain M4S28_03150 IPR036869 Chaperone J-domain superfamily M4S28_03150 IPR029024 TerB-like M4S28_03150 IPR023749 Co-chaperone DjlA M4S28_03165 IPR004431 3-isopropylmalate dehydratase, small subunit M4S28_03165 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel M4S28_03165 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain M4S28_03165 IPR033940 3-isopropylmalate dehydratase, swivel domain M4S28_03170 IPR033941 3-Isopropylmalate dehydratase, catalytic domain M4S28_03170 IPR036008 Aconitase, iron-sulfur domain M4S28_03170 IPR018136 Aconitase family, 4Fe-4S cluster binding site M4S28_03170 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 M4S28_03170 IPR004430 3-isopropylmalate dehydratase, large subunit M4S28_03170 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain M4S28_03175 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site M4S28_03175 IPR024084 Isopropylmalate dehydrogenase-like domain M4S28_03175 IPR004429 Isopropylmalate dehydrogenase M4S28_03180 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain M4S28_03180 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site M4S28_03180 IPR013785 Aldolase-type TIM barrel M4S28_03180 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily M4S28_03180 IPR005671 2-isopropylmalate synthase, bacterial-type M4S28_03180 IPR000891 Pyruvate carboxyltransferase M4S28_03195 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_03195 IPR001036 Acriflavin resistance protein M4S28_03200 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M4S28_03200 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M4S28_03210 IPR005119 LysR, substrate-binding M4S28_03210 IPR000847 Transcription regulator HTH, LysR M4S28_03210 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03210 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03215 IPR020845 AMP-binding, conserved site M4S28_03215 IPR000873 AMP-dependent synthetase/ligase M4S28_03215 IPR042099 AMP-dependent synthetase-like superfamily M4S28_03220 IPR000399 TPP-binding enzyme, conserved site M4S28_03220 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_03220 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_03220 IPR012000 Thiamine pyrophosphate enzyme, central domain M4S28_03220 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_03220 IPR039368 Acetolactate synthase large subunit, TPP binding domain M4S28_03220 IPR012846 Acetolactate synthase, large subunit, biosynthetic M4S28_03220 IPR029061 Thiamin diphosphate-binding fold M4S28_03225 IPR004789 Acetolactate synthase, small subunit M4S28_03225 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal M4S28_03225 IPR019455 Acetolactate synthase, small subunit, C-terminal M4S28_03225 IPR002912 ACT domain M4S28_03225 IPR039557 AHAS, ACT domain M4S28_03230 IPR000160 GGDEF domain M4S28_03230 IPR033424 Membrane-associated sensor domain M4S28_03230 IPR029787 Nucleotide cyclase M4S28_03235 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03235 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03235 IPR011711 GntR, C-terminal M4S28_03235 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_03235 IPR000524 Transcription regulator HTH, GntR M4S28_03240 IPR001697 Pyruvate kinase M4S28_03240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_03240 IPR040442 Pyruvate kinase-like domain superfamily M4S28_03240 IPR011037 Pyruvate kinase-like, insert domain superfamily M4S28_03240 IPR018209 Pyruvate kinase, active site M4S28_03240 IPR015793 Pyruvate kinase, barrel M4S28_03240 IPR015795 Pyruvate kinase, C-terminal M4S28_03240 IPR036918 Pyruvate kinase, C-terminal domain superfamily M4S28_03240 IPR015806 Pyruvate kinase, insert domain superfamily M4S28_03245 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03245 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03245 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M4S28_03245 IPR001034 DeoR-type HTH domain M4S28_03245 IPR014036 DeoR C-terminal sensor domain M4S28_03245 IPR037171 NagB/RpiA transferase-like M4S28_03250 IPR017932 Glutamine amidotransferase type 2 domain M4S28_03250 IPR035466 GlmS/AgaS, SIS domain 1 M4S28_03250 IPR035490 GlmS/FrlB, SIS domain 2 M4S28_03250 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising M4S28_03250 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_03250 IPR001347 Sugar isomerase (SIS) M4S28_03255 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M4S28_03255 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase M4S28_03255 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_03255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_03255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_03265 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03265 IPR014284 RNA polymerase sigma-70 like domain M4S28_03265 IPR000943 RNA polymerase sigma-70 M4S28_03265 IPR009042 RNA polymerase sigma-70 region 1.2 M4S28_03265 IPR007627 RNA polymerase sigma-70 region 2 M4S28_03265 IPR028630 RNA polymerase sigma factor RpoD M4S28_03265 IPR012760 RNA polymerase sigma factor RpoD, C-terminal M4S28_03265 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_03265 IPR013325 RNA polymerase sigma factor, region 2 M4S28_03265 IPR042189 Sigma-70 factor, region 1.1 superfamily M4S28_03265 IPR007624 RNA polymerase sigma-70 region 3 M4S28_03265 IPR007630 RNA polymerase sigma-70 region 4 M4S28_03265 IPR007631 RNA polymerase sigma factor 70, non-essential domain M4S28_03265 IPR007127 RNA polymerase sigma factor 70, region 1.1 M4S28_03270 IPR013173 DNA primase DnaG, DnaB-binding domain M4S28_03270 IPR036977 DNA Primase, CHC2-type zinc finger M4S28_03270 IPR030846 DNA primase DnaG, bacteria M4S28_03270 IPR034151 Bacterial DnaG primase, TOPRIM domain M4S28_03270 IPR006171 TOPRIM domain M4S28_03270 IPR002694 Zinc finger, CHC2-type M4S28_03270 IPR006295 DNA primase, DnaG M4S28_03270 IPR019475 DNA primase, DnaB-helicase binding domain M4S28_03270 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily M4S28_03270 IPR013264 DNA primase, catalytic core, N-terminal M4S28_03270 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M4S28_03275 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like M4S28_03275 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 M4S28_03275 IPR019004 Uncharacterised protein YqeY/Aim41 M4S28_03275 IPR042184 YqeY/Aim41, N-terminal domain M4S28_03280 IPR001911 Ribosomal protein S21 M4S28_03280 IPR018278 Ribosomal protein S21, conserved site M4S28_03280 IPR038380 Ribosomal protein S21 superfamily M4S28_03285 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD M4S28_03285 IPR017860 Peptidase M22, conserved site M4S28_03285 IPR017861 Kae1/TsaD family M4S28_03285 IPR000905 Gcp-like domain M4S28_03290 IPR000073 Alpha/beta hydrolase fold-1 M4S28_03290 IPR029058 Alpha/Beta hydrolase fold M4S28_03295 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY M4S28_03300 IPR006157 Dihydroneopterin aldolase/epimerase domain M4S28_03300 IPR006156 Dihydroneopterin aldolase M4S28_03305 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M4S28_03305 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M4S28_03310 IPR003824 Undecaprenyl-diphosphatase UppP M4S28_03315 IPR002646 Poly A polymerase, head domain M4S28_03315 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain M4S28_03315 IPR012006 tRNA nucleotidyltransferase, proteobacteria M4S28_03315 IPR003607 HD/PDEase domain M4S28_03315 IPR006674 HD domain M4S28_03320 IPR003593 AAA+ ATPase domain M4S28_03320 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03320 IPR002477 Peptidoglycan binding-like M4S28_03320 IPR036365 PGBD-like superfamily M4S28_03320 IPR036366 PGBD superfamily M4S28_03330 IPR003646 SH3-like domain, bacterial-type M4S28_03330 IPR016476 SH3 domain protein M4S28_03335 IPR001204 Phosphate transporter M4S28_03340 IPR002727 Protein of unknown function DUF47 M4S28_03340 IPR038078 PhoU-like domain superfamily M4S28_03340 IPR018445 Putative phosphate transport regulator M4S28_03345 IPR007899 CHAD domain M4S28_03345 IPR033469 CYTH-like domain superfamily M4S28_03345 IPR023577 CYTH domain M4S28_03345 IPR039013 Inorganic triphosphatase YgiF M4S28_03350 IPR013099 Potassium channel domain M4S28_03350 IPR028325 Voltage-gated potassium channel M4S28_03355 IPR033479 Double Cache domain 1 M4S28_03355 IPR003660 HAMP domain M4S28_03355 IPR029151 Periplasmic sensor-like domain superfamily M4S28_03355 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_03360 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme M4S28_03360 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain M4S28_03360 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase M4S28_03365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_03365 IPR011913 RfaE bifunctional protein, domain I M4S28_03365 IPR029056 Ribokinase-like M4S28_03365 IPR004821 Cytidyltransferase-like domain M4S28_03365 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_03365 IPR023030 Bifunctional protein HldE M4S28_03365 IPR011611 Carbohydrate kinase PfkB M4S28_03365 IPR011914 RfaE bifunctional protein, domain II M4S28_03370 IPR003423 Outer membrane efflux protein M4S28_03370 IPR010130 Type I secretion outer membrane protein, TolC M4S28_03375 IPR004385 Nucleoside diphosphate pyrophosphatase M4S28_03375 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_03375 IPR020084 NUDIX hydrolase, conserved site M4S28_03375 IPR000086 NUDIX hydrolase domain M4S28_03380 IPR009659 Protein of unknown function DUF1249 M4S28_03385 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA M4S28_03385 IPR029052 Metallo-dependent phosphatase-like M4S28_03385 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_03390 IPR029058 Alpha/Beta hydrolase fold M4S28_03390 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M4S28_03395 IPR006171 TOPRIM domain M4S28_03395 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative M4S28_03395 IPR018522 DNA topoisomerase, type IIA, conserved site M4S28_03395 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 M4S28_03395 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal M4S28_03395 IPR001241 DNA topoisomerase, type IIA M4S28_03395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_03395 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_03395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_03395 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_03395 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M4S28_03395 IPR002288 DNA gyrase B subunit, C-terminal M4S28_03400 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative M4S28_03400 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M4S28_03400 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M4S28_03400 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M4S28_03400 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M4S28_03400 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M4S28_03400 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M4S28_03405 IPR001940 Peptidase S1C M4S28_03405 IPR009003 Peptidase S1, PA clan M4S28_03405 IPR011783 Peptidase S1C, DegS M4S28_03405 IPR001478 PDZ domain M4S28_03405 IPR036034 PDZ superfamily M4S28_03410 IPR001478 PDZ domain M4S28_03410 IPR011782 Peptidase S1C, Do M4S28_03410 IPR009003 Peptidase S1, PA clan M4S28_03410 IPR001940 Peptidase S1C M4S28_03410 IPR036034 PDZ superfamily M4S28_03415 IPR009386 Protein of unknown function DUF1043 M4S28_03420 IPR005654 ATPase, AFG1-like M4S28_03420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03420 IPR030870 Cell division protein ZapE M4S28_03425 IPR036899 Ribosomal protein L13 superfamily M4S28_03425 IPR005822 Ribosomal protein L13 M4S28_03425 IPR023563 Ribosomal protein L13, conserved site M4S28_03425 IPR005823 Ribosomal protein L13, bacterial-type M4S28_03430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_03430 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_03430 IPR000754 Ribosomal protein S9 M4S28_03430 IPR020574 Ribosomal protein S9, conserved site M4S28_03430 IPR023035 Ribosomal protein S9, bacterial/plastid M4S28_03435 IPR005805 Rieske iron-sulphur protein, C-terminal M4S28_03435 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily M4S28_03435 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal M4S28_03435 IPR014349 Rieske iron-sulphur protein M4S28_03435 IPR017941 Rieske [2Fe-2S] iron-sulphur domain M4S28_03435 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit M4S28_03440 IPR016174 Di-haem cytochrome, transmembrane M4S28_03440 IPR027387 Cytochrome b/b6-like domain superfamily M4S28_03440 IPR005797 Cytochrome b/b6, N-terminal M4S28_03440 IPR036150 Cytochrome b/b6, C-terminal domain superfamily M4S28_03440 IPR005798 Cytochrome b/b6, C-terminal M4S28_03440 IPR030689 Cytochrome b M4S28_03445 IPR009056 Cytochrome c-like domain M4S28_03445 IPR036909 Cytochrome c-like domain superfamily M4S28_03445 IPR002326 Cytochrome c1 M4S28_03450 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_03450 IPR036249 Thioredoxin-like superfamily M4S28_03450 IPR034341 Stringent starvation protein A, N-terminal M4S28_03450 IPR004046 Glutathione S-transferase, C-terminal M4S28_03450 IPR004045 Glutathione S-transferase, N-terminal M4S28_03450 IPR040079 Glutathione Transferase family M4S28_03450 IPR010987 Glutathione S-transferase, C-terminal-like M4S28_03455 IPR007481 Stringent starvation protein B M4S28_03455 IPR036760 SspB-like superfamily M4S28_03460 IPR007055 BON domain M4S28_03460 IPR014004 Transport-associated and nodulation domain, bacteria M4S28_03465 IPR023070 DnaA initiator-associating protein M4S28_03465 IPR035461 GmhA/DiaA M4S28_03465 IPR001347 Sugar isomerase (SIS) M4S28_03470 IPR003509 Uncharacterised protein family UPF0102 M4S28_03470 IPR011335 Restriction endonuclease type II-like M4S28_03470 IPR011856 tRNA endonuclease-like domain superfamily M4S28_03475 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_03475 IPR028082 Periplasmic binding protein-like I M4S28_03475 IPR007443 Penicillin-binding protein activator LpoA M4S28_03480 IPR008189 rRNA small subunit methyltransferase I M4S28_03480 IPR018063 SAM-dependent methyltransferase RsmI, conserved site M4S28_03480 IPR014777 Tetrapyrrole methylase, subdomain 1 M4S28_03480 IPR035996 Tetrapyrrole methylase superfamily M4S28_03480 IPR000878 Tetrapyrrole methylase M4S28_03480 IPR014776 Tetrapyrrole methylase, subdomain 2 M4S28_03490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_03490 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily M4S28_03490 IPR002903 Ribosomal RNA small subunit methyltransferase H M4S28_03495 IPR011922 Cell division protein FtsL M4S28_03500 IPR012338 Beta-lactamase/transpeptidase-like M4S28_03500 IPR037532 Peptidoglycan D,D-transpeptidase FtsI M4S28_03500 IPR005311 Penicillin-binding protein, dimerisation domain M4S28_03500 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M4S28_03500 IPR001460 Penicillin-binding protein, transpeptidase M4S28_03505 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase M4S28_03505 IPR035911 MurE/MurF, N-terminal M4S28_03505 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_03505 IPR013221 Mur ligase, central M4S28_03505 IPR004101 Mur ligase, C-terminal M4S28_03505 IPR036565 Mur-like, catalytic domain superfamily M4S28_03505 IPR000713 Mur ligase, N-terminal catalytic domain M4S28_03510 IPR036565 Mur-like, catalytic domain superfamily M4S28_03510 IPR004101 Mur ligase, C-terminal M4S28_03510 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_03510 IPR013221 Mur ligase, central M4S28_03510 IPR000713 Mur ligase, N-terminal catalytic domain M4S28_03510 IPR035911 MurE/MurF, N-terminal M4S28_03510 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase M4S28_03515 IPR000715 Glycosyl transferase, family 4 M4S28_03515 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase M4S28_03515 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site M4S28_03520 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase M4S28_03520 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_03520 IPR004101 Mur ligase, C-terminal M4S28_03520 IPR036565 Mur-like, catalytic domain superfamily M4S28_03520 IPR013221 Mur ligase, central M4S28_03525 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site M4S28_03525 IPR013437 Probable peptidoglycan glycosyltransferase FtsW M4S28_03525 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA M4S28_03530 IPR006009 N-acetylglucosaminyltransferase, MurG M4S28_03530 IPR007235 Glycosyl transferase, family 28, C-terminal M4S28_03530 IPR004276 Glycosyltransferase family 28, N-terminal domain M4S28_03535 IPR005758 UDP-N-acetylmuramate--L-alanine ligase M4S28_03535 IPR000713 Mur ligase, N-terminal catalytic domain M4S28_03535 IPR013221 Mur ligase, central M4S28_03535 IPR036565 Mur-like, catalytic domain superfamily M4S28_03535 IPR004101 Mur ligase, C-terminal M4S28_03535 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_03540 IPR005548 Cell division protein FtsQ/DivIB M4S28_03540 IPR026579 Cell division protein FtsQ M4S28_03540 IPR034746 POTRA domain M4S28_03540 IPR013685 POTRA domain, FtsQ-type M4S28_03545 IPR020823 Cell division protein FtsA M4S28_03545 IPR003494 SHS2 domain inserted in FtsA M4S28_03550 IPR003008 Tubulin/FtsZ, GTPase domain M4S28_03550 IPR036525 Tubulin/FtsZ, GTPase domain superfamily M4S28_03550 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain M4S28_03550 IPR008280 Tubulin/FtsZ, C-terminal M4S28_03550 IPR024757 Cell division protein FtsZ, C-terminal M4S28_03550 IPR000158 Cell division protein FtsZ M4S28_03550 IPR020805 Cell division protein FtsZ, conserved site M4S28_03555 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_03555 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase M4S28_03555 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal M4S28_03555 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal M4S28_03560 IPR036670 SecA, preprotein cross-linking domain superfamily M4S28_03560 IPR036266 SecA, Wing/Scaffold superfamily M4S28_03560 IPR011130 SecA, preprotein cross-linking domain M4S28_03560 IPR011116 SecA Wing/Scaffold M4S28_03560 IPR014018 SecA motor DEAD M4S28_03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03560 IPR020937 SecA conserved site M4S28_03560 IPR000185 Protein translocase subunit SecA M4S28_03560 IPR004027 SEC-C motif M4S28_03560 IPR011115 SecA DEAD-like, N-terminal M4S28_03565 IPR020084 NUDIX hydrolase, conserved site M4S28_03565 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_03565 IPR000086 NUDIX hydrolase domain M4S28_03565 IPR003561 Mutator MutT M4S28_03565 IPR020476 NUDIX hydrolase M4S28_03570 IPR023940 Dihydrodipicolinate reductase M4S28_03570 IPR022663 Dihydrodipicolinate reductase, C-terminal M4S28_03570 IPR000846 Dihydrodipicolinate reductase, N-terminal M4S28_03570 IPR022664 Dihydrodipicolinate reductase, conserved site M4S28_03570 IPR036291 NAD(P)-binding domain superfamily M4S28_03575 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain M4S28_03575 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily M4S28_03575 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain M4S28_03575 IPR006274 Carbamoyl-phosphate synthase, small subunit M4S28_03575 IPR017926 Glutamine amidotransferase M4S28_03575 IPR029062 Class I glutamine amidotransferase-like M4S28_03580 IPR036914 Methylglyoxal synthase-like domain superfamily M4S28_03580 IPR011761 ATP-grasp fold M4S28_03580 IPR006275 Carbamoyl-phosphate synthase, large subunit M4S28_03580 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain M4S28_03580 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily M4S28_03580 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M4S28_03580 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain M4S28_03580 IPR011607 Methylglyoxal synthase-like domain M4S28_03580 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain M4S28_03580 IPR016185 Pre-ATP-grasp domain superfamily M4S28_03585 IPR002781 Transmembrane protein TauE-like M4S28_03590 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03590 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03590 IPR000847 Transcription regulator HTH, LysR M4S28_03590 IPR005119 LysR, substrate-binding M4S28_03600 IPR005115 Uncharacterised domain UPF0126 M4S28_03605 IPR023544 ABC transporter, vitamin B12-binding protein M4S28_03605 IPR002491 ABC transporter periplasmic binding domain M4S28_03615 IPR035994 Nucleoside phosphorylase superfamily M4S28_03615 IPR000845 Nucleoside phosphorylase domain M4S28_03615 IPR010049 MTA/SAH nucleosidase M4S28_03625 IPR009051 Alpha-helical ferredoxin M4S28_03625 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 M4S28_03625 IPR023753 FAD/NAD(P)-binding domain M4S28_03625 IPR028261 Dihydroprymidine dehydrogenase domain II M4S28_03625 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_03625 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_03630 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_03630 IPR017932 Glutamine amidotransferase type 2 domain M4S28_03630 IPR013785 Aldolase-type TIM barrel M4S28_03630 IPR006982 Glutamate synthase, central-N M4S28_03630 IPR002932 Glutamate synthase domain M4S28_03630 IPR002489 Glutamate synthase, alpha subunit, C-terminal M4S28_03630 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily M4S28_03635 IPR009051 Alpha-helical ferredoxin M4S28_03635 IPR023753 FAD/NAD(P)-binding domain M4S28_03635 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_03635 IPR028261 Dihydroprymidine dehydrogenase domain II M4S28_03635 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 M4S28_03640 IPR017932 Glutamine amidotransferase type 2 domain M4S28_03640 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily M4S28_03640 IPR006982 Glutamate synthase, central-N M4S28_03640 IPR002932 Glutamate synthase domain M4S28_03640 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_03640 IPR013785 Aldolase-type TIM barrel M4S28_03640 IPR002489 Glutamate synthase, alpha subunit, C-terminal M4S28_03645 IPR005911 Protein YhcC-like M4S28_03645 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_03645 IPR007197 Radical SAM M4S28_03645 IPR032432 Radical SAM, C-terminal extension M4S28_03645 IPR006638 Elp3/MiaB/NifB M4S28_03645 IPR039661 ELP3/YhcC M4S28_03650 IPR000160 GGDEF domain M4S28_03650 IPR029016 GAF-like domain superfamily M4S28_03650 IPR003018 GAF domain M4S28_03650 IPR035919 EAL domain superfamily M4S28_03650 IPR013515 Phytochrome, central region M4S28_03650 IPR001294 Phytochrome M4S28_03650 IPR016132 Phytochrome chromophore attachment domain M4S28_03650 IPR029787 Nucleotide cyclase M4S28_03650 IPR001633 EAL domain M4S28_03655 IPR040642 Histidine kinase receptor ArcB, transmembrane domain M4S28_03655 IPR005467 Histidine kinase domain M4S28_03655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_03655 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_03655 IPR036641 HPT domain superfamily M4S28_03655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_03655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_03655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_03655 IPR000014 PAS domain M4S28_03655 IPR000700 PAS-associated, C-terminal M4S28_03655 IPR035965 PAS domain superfamily M4S28_03655 IPR013767 PAS fold M4S28_03655 IPR001789 Signal transduction response regulator, receiver domain M4S28_03655 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB M4S28_03655 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_03655 IPR011006 CheY-like superfamily M4S28_03655 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily M4S28_03665 IPR039420 Transcriptional regulatory protein WalR-like M4S28_03665 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03665 IPR001789 Signal transduction response regulator, receiver domain M4S28_03665 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_03665 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_03665 IPR011006 CheY-like superfamily M4S28_03670 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M4S28_03670 IPR010203 Regulator of ribonuclease activity A M4S28_03670 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M4S28_03680 IPR036291 NAD(P)-binding domain superfamily M4S28_03680 IPR001342 Homoserine dehydrogenase, catalytic M4S28_03680 IPR027795 CASTOR, ACT domain M4S28_03680 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I M4S28_03680 IPR001341 Aspartate kinase M4S28_03680 IPR019811 Homoserine dehydrogenase, conserved site M4S28_03680 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_03680 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain M4S28_03680 IPR002912 ACT domain M4S28_03680 IPR036393 Acetylglutamate kinase-like superfamily M4S28_03680 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding M4S28_03680 IPR018042 Aspartate kinase, conserved site M4S28_03685 IPR000870 Homoserine kinase M4S28_03685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_03685 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_03685 IPR006203 GHMP kinase, ATP-binding, conserved site M4S28_03685 IPR036554 GHMP kinase, C-terminal domain superfamily M4S28_03685 IPR013750 GHMP kinase, C-terminal domain M4S28_03685 IPR006204 GHMP kinase N-terminal domain M4S28_03690 IPR004450 Threonine synthase-like M4S28_03690 IPR029144 Threonine synthase, N-terminal M4S28_03690 IPR037158 Threonine synthase, N-terminal domain superfamily M4S28_03690 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_03690 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M4S28_03690 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_03695 IPR011140 Autonomous glycyl radical cofactor GrcA M4S28_03695 IPR001150 Glycine radical domain M4S28_03695 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M4S28_03700 IPR001719 AP endonuclease 2 M4S28_03700 IPR036237 Xylose isomerase-like superfamily M4S28_03700 IPR013022 Xylose isomerase-like, TIM barrel domain M4S28_03700 IPR018246 AP endonuclease 2, zinc binding site M4S28_03705 IPR002043 Uracil-DNA glycosylase family 1 M4S28_03705 IPR005122 Uracil-DNA glycosylase-like M4S28_03705 IPR036895 Uracil-DNA glycosylase-like domain superfamily M4S28_03720 IPR001463 Sodium:alanine symporter M4S28_03730 IPR005583 Peroxide stress protein YaaA M4S28_03735 IPR011545 DEAD/DEAH box helicase domain M4S28_03735 IPR028621 ATP-dependent RNA helicase SrmB M4S28_03735 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_03735 IPR001650 Helicase, C-terminal M4S28_03735 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03735 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_03735 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_03740 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_03740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_03740 IPR007848 Methyltransferase small domain M4S28_03740 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase M4S28_03745 IPR004685 Branched-chain amino acid transport system II carrier protein M4S28_03750 IPR029039 Flavoprotein-like superfamily M4S28_03750 IPR010086 Flavodoxin, long chain M4S28_03750 IPR008254 Flavodoxin/nitric oxide synthase M4S28_03750 IPR001226 Flavodoxin, conserved site M4S28_03755 IPR023009 Tyrosine recombinase XerC/XerD M4S28_03755 IPR011932 Tyrosine recombinase XerD M4S28_03755 IPR010998 Integrase/recombinase, N-terminal M4S28_03755 IPR004107 Integrase, SAM-like, N-terminal M4S28_03755 IPR013762 Integrase-like, catalytic domain superfamily M4S28_03755 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_03755 IPR002104 Integrase, catalytic domain M4S28_03760 IPR036249 Thioredoxin-like superfamily M4S28_03760 IPR033954 Disulphide bond isomerase, DsbC/G M4S28_03760 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal M4S28_03760 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily M4S28_03760 IPR012336 Thioredoxin-like fold M4S28_03765 IPR041122 RecJ, OB domain M4S28_03765 IPR004610 Bacterial RecJ exonuclease M4S28_03765 IPR003156 DHHA1 domain M4S28_03765 IPR001667 DDH domain M4S28_03765 IPR038763 DHH phosphoesterase superfamily M4S28_03775 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M4S28_03775 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_03775 IPR002313 Lysine-tRNA ligase, class II M4S28_03775 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal M4S28_03775 IPR012340 Nucleic acid-binding, OB-fold M4S28_03775 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M4S28_03780 IPR010523 Activator of aromatic catabolism M4S28_03780 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_03780 IPR004096 4-vinyl reductase, 4VR M4S28_03780 IPR025944 Sigma-54 interaction domain, conserved site M4S28_03780 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_03780 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_03780 IPR009057 Homeobox-like domain superfamily M4S28_03780 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily M4S28_03780 IPR002197 DNA binding HTH domain, Fis-type M4S28_03780 IPR003593 AAA+ ATPase domain M4S28_03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03795 IPR004230 DNA mismatch repair protein MutH M4S28_03795 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II M4S28_03795 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily M4S28_03795 IPR011335 Restriction endonuclease type II-like M4S28_03800 IPR022927 RNA pyrophosphohydrolase RppH M4S28_03800 IPR000086 NUDIX hydrolase domain M4S28_03800 IPR020084 NUDIX hydrolase, conserved site M4S28_03800 IPR020476 NUDIX hydrolase M4S28_03800 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_03805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_03805 IPR023151 PEP-utilising enzyme, conserved site M4S28_03805 IPR036637 Phosphohistidine domain superfamily M4S28_03805 IPR008279 PEP-utilising enzyme, mobile domain M4S28_03805 IPR008731 Phosphotransferase system, enzyme I N-terminal M4S28_03805 IPR036618 PtsI, HPr-binding domain superfamily M4S28_03805 IPR040442 Pyruvate kinase-like domain superfamily M4S28_03805 IPR006318 Phosphotransferase system, enzyme I-like M4S28_03805 IPR018274 PEP-utilising enzyme, active site M4S28_03805 IPR000121 PEP-utilising enzyme, C-terminal M4S28_03805 IPR003018 GAF domain M4S28_03805 IPR029016 GAF-like domain superfamily M4S28_03810 IPR002781 Transmembrane protein TauE-like M4S28_03815 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt M4S28_03820 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily M4S28_03820 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain M4S28_03820 IPR020940 Thymidylate synthase, active site M4S28_03820 IPR000398 Thymidylate synthase M4S28_03825 IPR001789 Signal transduction response regulator, receiver domain M4S28_03825 IPR039420 Transcriptional regulatory protein WalR-like M4S28_03825 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03825 IPR011006 CheY-like superfamily M4S28_03825 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_03825 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_03835 IPR003841 Sodium-dependent phosphate transport protein M4S28_03835 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein M4S28_03840 IPR005119 LysR, substrate-binding M4S28_03840 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03840 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03840 IPR000847 Transcription regulator HTH, LysR M4S28_03845 IPR036390 Winged helix DNA-binding domain superfamily M4S28_03845 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03845 IPR001845 HTH ArsR-type DNA-binding domain M4S28_03845 IPR011991 ArsR-like helix-turn-helix domain M4S28_03850 IPR036510 Ribosomal protein S20 superfamily M4S28_03850 IPR002583 Ribosomal protein S20 M4S28_03855 IPR004268 Peptidoglycan biosynthesis protein MurJ M4S28_03860 IPR015864 FAD synthetase M4S28_03860 IPR023468 Riboflavin kinase M4S28_03860 IPR002606 Riboflavin kinase, bacterial M4S28_03860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_03860 IPR023465 Riboflavin kinase domain superfamily M4S28_03860 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic M4S28_03865 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_03865 IPR002300 Aminoacyl-tRNA synthetase, class Ia M4S28_03865 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain M4S28_03865 IPR002301 Isoleucine-tRNA ligase M4S28_03865 IPR023585 Isoleucine-tRNA ligase, type 1 M4S28_03865 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M4S28_03865 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_03865 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M4S28_03865 IPR010663 Zinc finger, FPG/IleRS-type M4S28_03865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_03870 IPR001872 Peptidase A8, signal peptidase II M4S28_03875 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_03880 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase M4S28_03885 IPR001789 Signal transduction response regulator, receiver domain M4S28_03885 IPR007492 LytTR DNA-binding domain M4S28_03885 IPR011006 CheY-like superfamily M4S28_03890 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M4S28_03890 IPR010559 Signal transduction histidine kinase, internal region M4S28_03890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_03890 IPR003018 GAF domain M4S28_03895 IPR002559 Transposase, IS4-like M4S28_03895 IPR012337 Ribonuclease H-like superfamily M4S28_03895 IPR024473 Transposase, IS4, N-terminal M4S28_03900 IPR003706 CstA, N-terminal domain M4S28_03910 IPR001347 Sugar isomerase (SIS) M4S28_03910 IPR005486 Glucokinase regulatory protein, conserved site M4S28_03910 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein M4S28_03910 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ M4S28_03915 IPR005338 Anhydro-N-acetylmuramic acid kinase M4S28_03920 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type M4S28_03930 IPR035472 RpiR-like, SIS domain M4S28_03930 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_03930 IPR022821 Transcription regulator HTH, MurR M4S28_03930 IPR001347 Sugar isomerase (SIS) M4S28_03930 IPR000281 Helix-turn-helix protein RpiR M4S28_03930 IPR009057 Homeobox-like domain superfamily M4S28_03935 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily M4S28_03935 IPR022956 Beta-hexosaminidase, bacterial M4S28_03935 IPR019800 Glycoside hydrolase, family 3, active site M4S28_03935 IPR001764 Glycoside hydrolase, family 3, N-terminal M4S28_03935 IPR017853 Glycoside hydrolase superfamily M4S28_03940 IPR013785 Aldolase-type TIM barrel M4S28_03940 IPR006219 DHAP synthase, class 1 M4S28_03940 IPR006218 DAHP synthetase I/KDSA M4S28_03945 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_03945 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein M4S28_03945 IPR036263 Chorismate mutase type II superfamily M4S28_03945 IPR036979 Chorismate mutase domain superfamily M4S28_03945 IPR002701 Chorismate mutase II, prokaryotic-type M4S28_03945 IPR011277 Chorismate mutase, T-protein M4S28_03945 IPR036291 NAD(P)-binding domain superfamily M4S28_03945 IPR003099 Prephenate dehydrogenase M4S28_03950 IPR011055 Duplicated hybrid motif M4S28_03950 IPR007340 Opacity-associated protein A M4S28_03950 IPR016047 Peptidase M23 M4S28_03955 IPR027021 Cyclic di-GMP binding protein, PA4608 type M4S28_03955 IPR009875 PilZ domain M4S28_03960 IPR003439 ABC transporter-like M4S28_03960 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_03960 IPR017871 ABC transporter, conserved site M4S28_03960 IPR022374 Energy-dependent translational throttle protein EttA M4S28_03960 IPR032781 ABC-transporter extension domain M4S28_03960 IPR003593 AAA+ ATPase domain M4S28_03965 IPR008258 Transglycosylase SLT domain 1 M4S28_03965 IPR000189 Prokaryotic transglycosylase, active site M4S28_03965 IPR008939 Lytic transglycosylase, superhelical U-shaped M4S28_03965 IPR012289 Lytic transglycosylase, superhelical linker M4S28_03965 IPR023346 Lysozyme-like domain superfamily M4S28_03965 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily M4S28_03970 IPR013335 Trp repressor, bacterial M4S28_03970 IPR000831 Trp repressor M4S28_03970 IPR038116 TrpR-like superfamily M4S28_03970 IPR010921 Trp repressor/replication initiator M4S28_03975 IPR029001 Inosine triphosphate pyrophosphatase-like M4S28_03975 IPR002786 Inosine/xanthosine triphosphatase M4S28_03975 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 M4S28_03980 IPR035919 EAL domain superfamily M4S28_03980 IPR000160 GGDEF domain M4S28_03980 IPR003660 HAMP domain M4S28_03980 IPR029787 Nucleotide cyclase M4S28_03980 IPR001633 EAL domain M4S28_03985 IPR002912 ACT domain M4S28_03985 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase M4S28_03985 IPR036263 Chorismate mutase type II superfamily M4S28_03985 IPR036979 Chorismate mutase domain superfamily M4S28_03985 IPR002701 Chorismate mutase II, prokaryotic-type M4S28_03985 IPR010952 Chorismate mutase, gammaproteobacteria M4S28_03985 IPR001086 Prephenate dehydratase M4S28_03985 IPR018528 Prephenate dehydratase, conserved site M4S28_03990 IPR036567 Ribosome hibernation promotion factor-like M4S28_03990 IPR003489 Ribosome hibernation promoting factor/RaiA M4S28_03995 IPR008258 Transglycosylase SLT domain 1 M4S28_03995 IPR000189 Prokaryotic transglycosylase, active site M4S28_03995 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_03995 IPR023703 Membrane-bound lytic murein transglycosylase F M4S28_03995 IPR023346 Lysozyme-like domain superfamily M4S28_04000 IPR039565 Outer membrane lipoprotein BamD-like M4S28_04000 IPR017689 Outer membrane protein assembly factor BamD M4S28_04000 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_04005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_04005 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_04005 IPR006225 Pseudouridine synthase, RluC/RluD M4S28_04005 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_04005 IPR002942 RNA-binding S4 domain M4S28_04005 IPR036986 RNA-binding S4 domain superfamily M4S28_04010 IPR003730 Multi-copper polyphenol oxidoreductase M4S28_04010 IPR038371 Multi-copper polyphenol oxidoreductase superfamily M4S28_04010 IPR011324 Cytotoxic necrotizing factor-like, catalytic M4S28_04015 IPR004176 Clp, N-terminal M4S28_04015 IPR003593 AAA+ ATPase domain M4S28_04015 IPR003959 ATPase, AAA-type, core M4S28_04015 IPR017730 Chaperonin ClpB M4S28_04015 IPR036628 Clp, N-terminal domain superfamily M4S28_04015 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04015 IPR019489 Clp ATPase, C-terminal M4S28_04015 IPR041546 ClpA/ClpB, AAA lid domain M4S28_04015 IPR028299 ClpA/B, conserved site 2 M4S28_04015 IPR018368 ClpA/B, conserved site 1 M4S28_04015 IPR001270 ClpA/B family M4S28_04050 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase M4S28_04050 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily M4S28_04060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_04060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_04065 IPR001539 Peptidase U32 M4S28_04065 IPR032525 Peptidase family U32, C-terminal M4S28_04070 IPR007476 Putative exonuclease, RdgC M4S28_04075 IPR001789 Signal transduction response regulator, receiver domain M4S28_04075 IPR011006 CheY-like superfamily M4S28_04075 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_04075 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB M4S28_04075 IPR039420 Transcriptional regulatory protein WalR-like M4S28_04075 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04080 IPR000014 PAS domain M4S28_04080 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_04080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_04080 IPR005467 Histidine kinase domain M4S28_04080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_04080 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR M4S28_04080 IPR035965 PAS domain superfamily M4S28_04080 IPR013767 PAS fold M4S28_04080 IPR021766 Phosphate regulon sensor protein PhoR M4S28_04080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_04080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_04085 IPR024370 PBP domain M4S28_04085 IPR011862 Phosphate binding protein M4S28_04090 IPR003695 Ppx/GppA phosphatase M4S28_04090 IPR022371 Exopolyphosphatase M4S28_04090 IPR030673 Pyrophosphatase, GppA/Ppx-type M4S28_04095 IPR001736 Phospholipase D/Transphosphatidylase M4S28_04095 IPR036832 Polyphosphate kinase N-terminal domain superfamily M4S28_04095 IPR025198 Polyphosphate kinase N-terminal domain M4S28_04095 IPR025200 Polyphosphate kinase C-terminal domain 2 M4S28_04095 IPR036830 Polyphosphate kinase middle domain superfamily M4S28_04095 IPR024953 Polyphosphate kinase middle domain M4S28_04095 IPR041108 Polyphosphate kinase, C-terminal domain 1 M4S28_04095 IPR003414 Polyphosphate kinase M4S28_04100 IPR011864 Phosphate ABC transporter, permease protein PstC M4S28_04100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_04100 IPR035906 MetI-like superfamily M4S28_04105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_04105 IPR005672 Phosphate transport system permease protein PstA M4S28_04105 IPR035906 MetI-like superfamily M4S28_04110 IPR003439 ABC transporter-like M4S28_04110 IPR015850 ABC transporter, phosphate import, PstB M4S28_04110 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04110 IPR005670 Phosphate transport system permease protein 1 M4S28_04110 IPR003593 AAA+ ATPase domain M4S28_04110 IPR017871 ABC transporter, conserved site M4S28_04115 IPR028366 Phosphate transport system protein PhoU M4S28_04115 IPR038078 PhoU-like domain superfamily M4S28_04115 IPR026022 PhoU domain M4S28_04130 IPR005119 LysR, substrate-binding M4S28_04130 IPR000847 Transcription regulator HTH, LysR M4S28_04130 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04130 IPR036390 Winged helix DNA-binding domain superfamily M4S28_04135 IPR036822 Copper homeostasis (CutC) domain superfamily M4S28_04135 IPR023648 Copper homeostasis CutC domain M4S28_04135 IPR005627 Copper homeostasis protein CutC M4S28_04140 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M4S28_04140 IPR024706 Peroxiredoxin, AhpC-type M4S28_04140 IPR019479 Peroxiredoxin, C-terminal M4S28_04140 IPR036249 Thioredoxin-like superfamily M4S28_04140 IPR013766 Thioredoxin domain M4S28_04145 IPR000847 Transcription regulator HTH, LysR M4S28_04145 IPR005119 LysR, substrate-binding M4S28_04145 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04145 IPR036390 Winged helix DNA-binding domain superfamily M4S28_04150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_04150 IPR029151 Periplasmic sensor-like domain superfamily M4S28_04155 IPR000644 CBS domain M4S28_04160 IPR042118 QueA, domain 1 M4S28_04160 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily M4S28_04160 IPR042119 QueA, domain 2 M4S28_04160 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA M4S28_04165 IPR036511 Queuine tRNA-ribosyltransferase-like M4S28_04165 IPR004803 tRNA-guanine transglycosylase M4S28_04165 IPR002616 tRNA-guanine(15) transglycosylase-like M4S28_04170 IPR003849 Preprotein translocase YajC M4S28_04175 IPR001036 Acriflavin resistance protein M4S28_04175 IPR005791 Protein translocase subunit SecD M4S28_04175 IPR027398 SecD export protein N-terminal TM domain M4S28_04175 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M4S28_04175 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M4S28_04175 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M4S28_04180 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M4S28_04180 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M4S28_04180 IPR005665 Protein-export membrane protein SecF, bacterial M4S28_04180 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M4S28_04185 IPR020583 Inositol monophosphatase, metal-binding site M4S28_04185 IPR000760 Inositol monophosphatase-like M4S28_04185 IPR020550 Inositol monophosphatase, conserved site M4S28_04185 IPR022337 Inositol monophosphatase, SuhB M4S28_04185 IPR033942 Inositol monophosphatase M4S28_04190 IPR029028 Alpha/beta knot methyltransferases M4S28_04190 IPR001537 tRNA/rRNA methyltransferase, SpoU type M4S28_04190 IPR004384 RNA methyltransferase TrmJ/LasT M4S28_04190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_04195 IPR010242 Transcription factor HTH, IscR M4S28_04195 IPR030489 Transcription regulator Rrf2-type, conserved site M4S28_04195 IPR000944 Transcription regulator Rrf2-type M4S28_04195 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04195 IPR036390 Winged helix DNA-binding domain superfamily M4S28_04200 IPR000192 Aminotransferase class V domain M4S28_04200 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M4S28_04200 IPR010240 Cysteine desulfurase IscS M4S28_04200 IPR016454 Cysteine desulfurase M4S28_04200 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_04200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_04200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_04205 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal M4S28_04205 IPR011339 ISC system FeS cluster assembly, IscU scaffold M4S28_04210 IPR016092 FeS cluster insertion protein M4S28_04210 IPR017870 FeS cluster insertion, C-terminal, conserved site M4S28_04210 IPR035903 HesB-like domain superfamily M4S28_04210 IPR011302 Iron-binding protein IscA, proteobacteria M4S28_04210 IPR000361 FeS cluster biogenesis M4S28_04215 IPR001623 DnaJ domain M4S28_04215 IPR004640 Co-chaperone Hsc20 M4S28_04215 IPR036386 HscB, C-terminal domain superfamily M4S28_04215 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain M4S28_04215 IPR036869 Chaperone J-domain superfamily M4S28_04220 IPR018181 Heat shock protein 70, conserved site M4S28_04220 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M4S28_04220 IPR042039 HscA chaperone, nucleotide-binding domain M4S28_04220 IPR013126 Heat shock protein 70 family M4S28_04220 IPR010236 ISC system FeS cluster assembly, HscA chaperone M4S28_04220 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M4S28_04225 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_04225 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_04225 IPR001055 Adrenodoxin M4S28_04225 IPR018298 Adrenodoxin, iron-sulphur binding site M4S28_04225 IPR012675 Beta-grasp domain superfamily M4S28_04225 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria M4S28_04230 IPR007479 ISC system FeS cluster assembly, IscX M4S28_04230 IPR036762 IscX-like superfamily M4S28_04235 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M4S28_04235 IPR008330 Peptidase M17, peptidase B M4S28_04235 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M4S28_04235 IPR001346 Interferon regulatory factor DNA-binding domain M4S28_04240 IPR034907 Nucleoside diphosphate kinase-like domain M4S28_04240 IPR036850 Nucleoside diphosphate kinase-like domain superfamily M4S28_04240 IPR001564 Nucleoside diphosphate kinase M4S28_04240 IPR023005 Nucleoside diphosphate kinase, active site M4S28_04245 IPR013785 Aldolase-type TIM barrel M4S28_04245 IPR006638 Elp3/MiaB/NifB M4S28_04245 IPR040072 Methyltransferase (Class A) M4S28_04245 IPR027492 Dual-specificity RNA methyltransferase RlmN M4S28_04245 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr M4S28_04245 IPR007197 Radical SAM M4S28_04250 IPR023690 Cytoskeleton protein RodZ M4S28_04250 IPR001387 Cro/C1-type helix-turn-helix domain M4S28_04250 IPR025194 Domain of unknown function DUF4115 M4S28_04250 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_04255 IPR011005 Dihydropteroate synthase-like M4S28_04255 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial M4S28_04255 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type M4S28_04260 IPR004154 Anticodon-binding M4S28_04260 IPR036621 Anticodon-binding domain superfamily M4S28_04260 IPR015807 Histidine-tRNA ligase M4S28_04260 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain M4S28_04260 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit M4S28_04260 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_04260 IPR033656 Histidyl-anticodon-binding M4S28_04265 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_04265 IPR018704 Tetratricopeptide repeat-like domain M4S28_04265 IPR026039 Uncharacterised protein family UPF0070 M4S28_04270 IPR017687 Outer membrane protein assembly factor BamB M4S28_04270 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M4S28_04270 IPR002372 Pyrrolo-quinoline quinone repeat M4S28_04270 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M4S28_04270 IPR015943 WD40/YVTN repeat-like-containing domain superfamily M4S28_04275 IPR005225 Small GTP-binding protein domain M4S28_04275 IPR003593 AAA+ ATPase domain M4S28_04275 IPR031166 EngA-type guanine nucleotide-binding (G) domain M4S28_04275 IPR016484 GTP-binding protein EngA M4S28_04275 IPR006073 GTP binding domain M4S28_04275 IPR032859 GTPase Der, C-terminal KH-domain-like M4S28_04275 IPR015946 K homology domain-like, alpha/beta M4S28_04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04280 IPR002318 Alanine-tRNA ligase, class IIc M4S28_04280 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M4S28_04280 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_04280 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M4S28_04280 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily M4S28_04280 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain M4S28_04280 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal M4S28_04280 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria M4S28_04280 IPR003156 DHHA1 domain M4S28_04285 IPR029787 Nucleotide cyclase M4S28_04285 IPR000014 PAS domain M4S28_04285 IPR000700 PAS-associated, C-terminal M4S28_04285 IPR013656 PAS fold-4 M4S28_04285 IPR000160 GGDEF domain M4S28_04285 IPR035965 PAS domain superfamily M4S28_04300 IPR001851 ABC transporter, permease M4S28_04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04310 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M4S28_04310 IPR003593 AAA+ ATPase domain M4S28_04310 IPR003439 ABC transporter-like M4S28_04310 IPR017871 ABC transporter, conserved site M4S28_04315 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein M4S28_04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04315 IPR003593 AAA+ ATPase domain M4S28_04315 IPR003439 ABC transporter-like M4S28_04315 IPR017871 ABC transporter, conserved site M4S28_04320 IPR002669 Urease accessory protein UreD M4S28_04325 IPR012010 Urease, gamma subunit M4S28_04325 IPR002026 Urease, gamma/gamma-beta subunit M4S28_04325 IPR036463 Urease, gamma subunit superfamily M4S28_04330 IPR002019 Urease, beta subunit M4S28_04330 IPR036461 Urease, beta subunit superfamily M4S28_04335 IPR029754 Urease nickel binding site M4S28_04335 IPR017951 Urease alpha subunit, C-terminal M4S28_04335 IPR005848 Urease, alpha subunit M4S28_04335 IPR017950 Urease active site M4S28_04335 IPR032466 Metal-dependent hydrolase M4S28_04335 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_04335 IPR006680 Amidohydrolase-related M4S28_04335 IPR011612 Urease alpha-subunit, N-terminal domain M4S28_04340 IPR012406 Urease accessory protein UreE M4S28_04340 IPR007864 Urease accessory protein UreE, C-terminal domain M4S28_04340 IPR036675 UreE, C-terminal domain superfamily M4S28_04340 IPR004029 UreE urease accessory, N-terminal M4S28_04340 IPR036118 UreE urease accessory, N-terminal domain superfamily M4S28_04350 IPR002639 Urease accessory protein UreF M4S28_04350 IPR038277 UreF domain superfamily M4S28_04355 IPR004400 Urease accessory protein UreG M4S28_04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04355 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M4S28_04360 IPR025824 OB-fold nucleic acid binding domain M4S28_04360 IPR003753 Exonuclease VII, large subunit M4S28_04360 IPR020579 Exonuclease VII, large subunit, C-terminal M4S28_04365 IPR013785 Aldolase-type TIM barrel M4S28_04365 IPR000644 CBS domain M4S28_04365 IPR005990 Inosine-5'-monophosphate dehydrogenase M4S28_04365 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M4S28_04365 IPR001093 IMP dehydrogenase/GMP reductase M4S28_04370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_04370 IPR022310 NAD/GMP synthase M4S28_04370 IPR025777 GMP synthetase ATP pyrophosphatase domain M4S28_04370 IPR001674 GMP synthase, C-terminal M4S28_04370 IPR017926 Glutamine amidotransferase M4S28_04370 IPR029062 Class I glutamine amidotransferase-like M4S28_04370 IPR004739 GMP synthase, glutamine amidotransferase M4S28_04370 IPR022955 GMP synthase M4S28_04375 IPR013783 Immunoglobulin-like fold M4S28_04375 IPR003610 Carbohydrate-binding module family 5/12 M4S28_04375 IPR036573 Carbohydrate-binding module superfamily 5/12 M4S28_04375 IPR009470 Chitinase, C-terminal M4S28_04375 IPR011583 Chitinase II M4S28_04375 IPR029070 Chitinase insertion domain superfamily M4S28_04375 IPR001223 Glycoside hydrolase family 18, catalytic domain M4S28_04375 IPR017853 Glycoside hydrolase superfamily M4S28_04380 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M4S28_04385 IPR000791 Acetate transporter GPR1/FUN34/SatP family M4S28_04390 IPR001463 Sodium:alanine symporter M4S28_04395 IPR022712 Beta-Casp domain M4S28_04395 IPR001279 Metallo-beta-lactamase M4S28_04395 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_04395 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain M4S28_04400 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase M4S28_04400 IPR002123 Phospholipid/glycerol acyltransferase M4S28_04425 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M4S28_04425 IPR041107 RimK, PreATP-grasp domain M4S28_04425 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M4S28_04425 IPR013815 ATP-grasp fold, subdomain 1 M4S28_04425 IPR013651 ATP-grasp fold, RimK-type M4S28_04425 IPR011761 ATP-grasp fold M4S28_04425 IPR021109 Aspartic peptidase domain superfamily M4S28_04435 IPR023620 Small protein B M4S28_04435 IPR000037 SsrA-binding protein M4S28_04435 IPR020081 SsrA-binding protein, conserved site M4S28_04440 IPR005031 Coenzyme Q-binding protein COQ10, START domain M4S28_04440 IPR023393 START-like domain superfamily M4S28_04445 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M4S28_04445 IPR037021 RnfH superfamily M4S28_04445 IPR005346 RnfH protein M4S28_04450 IPR026592 Outer membrane protein assembly factor BamE M4S28_04450 IPR007450 Lipoprotein SmpA/OmlA M4S28_04450 IPR037873 BamE-like M4S28_04455 IPR003395 RecF/RecN/SMC, N-terminal M4S28_04455 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04455 IPR004604 DNA recombination/repair protein RecN M4S28_04460 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal M4S28_04460 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal M4S28_04460 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M4S28_04460 IPR002504 NAD kinase M4S28_04465 IPR000740 GrpE nucleotide exchange factor M4S28_04465 IPR013805 GrpE nucleotide exchange factor, coiled-coil M4S28_04465 IPR009012 GrpE nucleotide exchange factor, head M4S28_04470 IPR023954 C4-dicarboxylate transport protein M4S28_04470 IPR001991 Sodium:dicarboxylate symporter M4S28_04470 IPR018107 Sodium:dicarboxylate symporter, conserved site M4S28_04470 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_04480 IPR002559 Transposase, IS4-like M4S28_04480 IPR012337 Ribonuclease H-like superfamily M4S28_04480 IPR024473 Transposase, IS4, N-terminal M4S28_04485 IPR013126 Heat shock protein 70 family M4S28_04485 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M4S28_04485 IPR012725 Chaperone DnaK M4S28_04485 IPR018181 Heat shock protein 70, conserved site M4S28_04485 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M4S28_04490 IPR012724 Chaperone DnaJ M4S28_04490 IPR002939 Chaperone DnaJ, C-terminal M4S28_04490 IPR001623 DnaJ domain M4S28_04490 IPR018253 DnaJ domain, conserved site M4S28_04490 IPR008971 HSP40/DnaJ peptide-binding M4S28_04490 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M4S28_04490 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M4S28_04490 IPR036869 Chaperone J-domain superfamily M4S28_04495 IPR031982 Type IV minor pilin ComP M4S28_04495 IPR012902 Prokaryotic N-terminal methylation site M4S28_04520 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT M4S28_04520 IPR011540 AbgT, Proteobacteria M4S28_04525 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_04525 IPR000644 CBS domain M4S28_04525 IPR002550 CNNM, transmembrane domain M4S28_04525 IPR005170 Transporter-associated domain M4S28_04525 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_04530 IPR016192 APOBEC/CMP deaminase, zinc-binding M4S28_04530 IPR002125 Cytidine and deoxycytidylate deaminase domain M4S28_04530 IPR016193 Cytidine deaminase-like M4S28_04530 IPR028883 tRNA-specific adenosine deaminase M4S28_04535 IPR008258 Transglycosylase SLT domain 1 M4S28_04535 IPR000189 Prokaryotic transglycosylase, active site M4S28_04535 IPR023703 Membrane-bound lytic murein transglycosylase F M4S28_04535 IPR023346 Lysozyme-like domain superfamily M4S28_04535 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_04540 IPR029062 Class I glutamine amidotransferase-like M4S28_04540 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal M4S28_04540 IPR017926 Glutamine amidotransferase M4S28_04540 IPR010073 Phosphoribosylformylglycinamidine synthase PurL M4S28_04540 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain M4S28_04540 IPR010918 PurM-like, C-terminal domain M4S28_04540 IPR036676 PurM-like, C-terminal domain superfamily M4S28_04540 IPR036921 PurM-like, N-terminal domain superfamily M4S28_04540 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily M4S28_04550 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria M4S28_04550 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily M4S28_04550 IPR001451 Hexapeptide repeat M4S28_04550 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain M4S28_04550 IPR011004 Trimeric LpxA-like superfamily M4S28_04550 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family M4S28_04555 IPR008334 5'-Nucleotidase, C-terminal M4S28_04555 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M4S28_04555 IPR006146 5'-Nucleotidase, conserved site M4S28_04555 IPR006179 5'-Nucleotidase/apyrase M4S28_04555 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_04555 IPR029052 Metallo-dependent phosphatase-like M4S28_04560 IPR002771 Multiple antibiotic resistance (MarC)-related M4S28_04575 IPR009813 Uncharacterised protein family YebG M4S28_04575 IPR038627 YebG-like superfamily M4S28_04580 IPR005119 LysR, substrate-binding M4S28_04580 IPR000847 Transcription regulator HTH, LysR M4S28_04580 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04580 IPR036390 Winged helix DNA-binding domain superfamily M4S28_04590 IPR011335 Restriction endonuclease type II-like M4S28_04590 IPR013986 DExx box DNA helicase domain superfamily M4S28_04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04590 IPR006697 RecBCD enzyme subunit RecC M4S28_04590 IPR041500 RecC, C-terminal M4S28_04600 IPR000212 DNA helicase, UvrD/REP type M4S28_04600 IPR034739 UvrD/AddA helicase, N-terminal M4S28_04600 IPR014017 UvrD-like DNA helicase, C-terminal M4S28_04600 IPR011335 Restriction endonuclease type II-like M4S28_04600 IPR014016 UvrD-like helicase, ATP-binding domain M4S28_04600 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M4S28_04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04600 IPR011604 Exonuclease, phage-type/RecB, C-terminal M4S28_04600 IPR004586 RecBCD enzyme subunit RecB M4S28_04605 IPR003593 AAA+ ATPase domain M4S28_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04605 IPR006344 RecBCD enzyme subunit RecD M4S28_04605 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain M4S28_04605 IPR027785 UvrD-like helicase C-terminal domain M4S28_04615 IPR010167 Amino-acid N-acetyltransferase M4S28_04615 IPR033719 N-acetylglutamate synthase, kinase-like domain M4S28_04615 IPR036393 Acetylglutamate kinase-like superfamily M4S28_04615 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_04615 IPR016181 Acyl-CoA N-acyltransferase M4S28_04615 IPR000182 GNAT domain M4S28_04625 IPR010611 3D domain M4S28_04625 IPR026044 Membrane-bound lytic murein transglycosylase A M4S28_04625 IPR034654 MltA, 3D domain M4S28_04625 IPR005300 Lytic transglycosylase MltA, domain B M4S28_04625 IPR036908 RlpA-like domain superfamily M4S28_04630 IPR000594 THIF-type NAD/FAD binding fold M4S28_04630 IPR035985 Ubiquitin-activating enzyme M4S28_04635 IPR003808 Fe-S metabolism associated domain, SufE-like M4S28_04640 IPR010970 Cysteine desulfurase, SufS M4S28_04640 IPR016454 Cysteine desulfurase M4S28_04640 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_04640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_04640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_04640 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA M4S28_04640 IPR000192 Aminotransferase class V domain M4S28_04645 IPR036291 NAD(P)-binding domain superfamily M4S28_04645 IPR013332 Ketopantoate reductase, N-terminal domain M4S28_04645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_04645 IPR003710 Ketopantoate reductase ApbA/PanE M4S28_04645 IPR013752 Ketopantoate reductase, C-terminal domain M4S28_04645 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_04650 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like M4S28_04650 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily M4S28_04660 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 M4S28_04660 IPR011701 Major facilitator superfamily M4S28_04660 IPR020846 Major facilitator superfamily domain M4S28_04660 IPR036259 MFS transporter superfamily M4S28_04665 IPR029000 Cyclophilin-like domain superfamily M4S28_04665 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site M4S28_04665 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M4S28_04675 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD M4S28_04675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_04675 IPR007848 Methyltransferase small domain M4S28_04680 IPR002634 BolA protein M4S28_04680 IPR036065 BolA-like superfamily M4S28_04685 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A M4S28_04685 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain M4S28_04690 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD M4S28_04690 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B M4S28_04695 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C M4S28_04695 IPR007329 FMN-binding M4S28_04700 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D M4S28_04700 IPR003667 NqrDE/RnfAE M4S28_04705 IPR003667 NqrDE/RnfAE M4S28_04705 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E M4S28_04710 IPR017938 Riboflavin synthase-like beta-barrel M4S28_04710 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_04710 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F M4S28_04710 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_04710 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M4S28_04710 IPR012675 Beta-grasp domain superfamily M4S28_04710 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_04710 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_04710 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_04715 IPR024932 Flavin transferase ApbE M4S28_04715 IPR003374 ApbE-like superfamily M4S28_04715 IPR042159 Flavin-trafficking protein ApbE M4S28_04720 IPR007495 (Na+)-NQR maturation factor NqrM M4S28_04725 IPR001789 Signal transduction response regulator, receiver domain M4S28_04725 IPR000160 GGDEF domain M4S28_04725 IPR011006 CheY-like superfamily M4S28_04725 IPR029787 Nucleotide cyclase M4S28_04730 IPR036775 DNA polymerase, Y-family, little finger domain superfamily M4S28_04730 IPR017961 DNA polymerase, Y-family, little finger domain M4S28_04730 IPR022880 DNA polymerase IV M4S28_04730 IPR024728 DNA polymerase type-Y, HhH motif M4S28_04730 IPR001126 UmuC domain M4S28_04735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_04735 IPR029151 Periplasmic sensor-like domain superfamily M4S28_04740 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_04740 IPR018982 RQC domain M4S28_04740 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M4S28_04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04740 IPR011545 DEAD/DEAH box helicase domain M4S28_04740 IPR010997 HRDC-like superfamily M4S28_04740 IPR001650 Helicase, C-terminal M4S28_04740 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_04740 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial M4S28_04740 IPR004589 DNA helicase, ATP-dependent, RecQ type M4S28_04740 IPR002121 HRDC domain M4S28_04755 IPR000175 Sodium:neurotransmitter symporter M4S28_04755 IPR037272 Sodium:neurotransmitter symporter superfamily M4S28_04760 IPR006638 Elp3/MiaB/NifB M4S28_04760 IPR031691 Lipoyl synthase, N-terminal M4S28_04760 IPR003698 Lipoyl synthase M4S28_04760 IPR007197 Radical SAM M4S28_04760 IPR013785 Aldolase-type TIM barrel M4S28_04765 IPR000544 Octanoyltransferase M4S28_04765 IPR020605 Octanoyltransferase, conserved site M4S28_04765 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain M4S28_04770 IPR007454 Uncharacterised protein family UPF0250 M4S28_04770 IPR027471 YbeD-like domain superfamily M4S28_04775 IPR012338 Beta-lactamase/transpeptidase-like M4S28_04775 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M4S28_04775 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M4S28_04775 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M4S28_04775 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M4S28_04775 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M4S28_04780 IPR034718 Endolytic peptidoglycan transglycosylase RlpA M4S28_04780 IPR009009 RlpA-like protein, double-psi beta-barrel domain M4S28_04780 IPR036908 RlpA-like domain superfamily M4S28_04780 IPR012997 Rare lipoprotein A M4S28_04780 IPR007730 Sporulation-like domain M4S28_04780 IPR036680 Sporulation-like domain superfamily M4S28_04785 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB M4S28_04785 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site M4S28_04785 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA M4S28_04790 IPR017790 Penicillin-binding protein 2 M4S28_04790 IPR005311 Penicillin-binding protein, dimerisation domain M4S28_04790 IPR012338 Beta-lactamase/transpeptidase-like M4S28_04790 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M4S28_04790 IPR001460 Penicillin-binding protein, transpeptidase M4S28_04795 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_04795 IPR003742 RNA methyltransferase RlmH M4S28_04795 IPR029028 Alpha/beta knot methyltransferases M4S28_04800 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M4S28_04805 IPR005790 DNA polymerase III, delta subunit M4S28_04805 IPR010372 DNA polymerase III delta, N-terminal M4S28_04805 IPR032780 DNA polymerase III subunit delta, C-terminal M4S28_04805 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04805 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M4S28_04810 IPR007485 LPS-assembly lipoprotein LptE M4S28_04815 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M4S28_04815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_04815 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_04815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_04815 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M4S28_04815 IPR025709 Leucyl-tRNA synthetase, editing domain M4S28_04815 IPR002302 Leucine-tRNA ligase M4S28_04815 IPR002300 Aminoacyl-tRNA synthetase, class Ia M4S28_04820 IPR009912 Zinc-ribbon containing domain M4S28_04825 IPR003010 Carbon-nitrogen hydrolase M4S28_04825 IPR004563 Apolipoprotein N-acyltransferase M4S28_04825 IPR036526 Carbon-nitrogen hydrolase superfamily M4S28_04830 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_04830 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_04830 IPR005170 Transporter-associated domain M4S28_04830 IPR000644 CBS domain M4S28_04835 IPR023091 Metalloprotease catalytic domain superfamily, predicted M4S28_04835 IPR002036 Endoribonuclease YbeY M4S28_04835 IPR020549 Endoribonuclease YbeY, conserved site M4S28_04840 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04840 IPR003714 PhoH-like protein M4S28_04845 IPR013848 Methylthiotransferase, N-terminal M4S28_04845 IPR002792 TRAM domain M4S28_04845 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_04845 IPR007197 Radical SAM M4S28_04845 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB M4S28_04845 IPR005839 Methylthiotransferase M4S28_04845 IPR020612 Methylthiotransferase, conserved site M4S28_04845 IPR006638 Elp3/MiaB/NifB M4S28_04845 IPR038135 Methylthiotransferase, N-terminal domain superfamily M4S28_04850 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M4S28_04850 IPR002938 FAD-binding domain M4S28_04850 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_04850 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M4S28_04855 IPR015943 WD40/YVTN repeat-like-containing domain superfamily M4S28_04855 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily M4S28_04855 IPR019405 Lactonase, 7-bladed beta propeller M4S28_04955 IPR004095 TGS M4S28_04955 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 M4S28_04955 IPR012675 Beta-grasp domain superfamily M4S28_04955 IPR031167 OBG-type guanine nucleotide-binding (G) domain M4S28_04955 IPR012676 TGS-like M4S28_04955 IPR023192 TGS-like domain superfamily M4S28_04955 IPR013029 YchF, C-terminal domain M4S28_04955 IPR041706 YchF, N-terminal M4S28_04955 IPR006073 GTP binding domain M4S28_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_04960 IPR001328 Peptidyl-tRNA hydrolase M4S28_04960 IPR036416 Peptidyl-tRNA hydrolase superfamily M4S28_04960 IPR018171 Peptidyl-tRNA hydrolase, conserved site M4S28_04965 IPR000836 Phosphoribosyltransferase domain M4S28_04965 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain M4S28_04965 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site M4S28_04965 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type M4S28_04965 IPR005946 Ribose-phosphate pyrophosphokinase M4S28_04965 IPR029057 Phosphoribosyltransferase-like M4S28_04970 IPR013750 GHMP kinase, C-terminal domain M4S28_04970 IPR036554 GHMP kinase, C-terminal domain superfamily M4S28_04970 IPR006204 GHMP kinase N-terminal domain M4S28_04970 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase M4S28_04970 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_04970 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_04975 IPR004565 Outer membrane lipoprotein LolB M4S28_04975 IPR029046 Lipoprotein localisation LolA/LolB/LppX M4S28_04980 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily M4S28_04980 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase M4S28_04980 IPR018214 Glutamyl-tRNA reductase, conserved site M4S28_04980 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain M4S28_04980 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily M4S28_04980 IPR036291 NAD(P)-binding domain superfamily M4S28_04980 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal M4S28_04980 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M4S28_04985 IPR005139 Peptide chain release factor M4S28_04985 IPR000352 Peptide chain release factor class I M4S28_04985 IPR004373 Peptide chain release factor 1 M4S28_04990 IPR040758 Release factor glutamine methyltransferase, N-terminal domain M4S28_04990 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific M4S28_04990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_04990 IPR025714 Methyltransferase domain M4S28_04990 IPR004556 Methyltransferase HemK-like M4S28_04990 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_04995 IPR007360 Invasion gene expression up-regulator, SirB M4S28_05000 IPR032698 Protein SirB1, N-terminal M4S28_05000 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_05005 IPR006269 3-deoxy-8-phosphooctulonate synthase M4S28_05005 IPR006218 DAHP synthetase I/KDSA M4S28_05005 IPR013785 Aldolase-type TIM barrel M4S28_05010 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M4S28_05010 IPR006146 5'-Nucleotidase, conserved site M4S28_05010 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_05010 IPR008334 5'-Nucleotidase, C-terminal M4S28_05010 IPR029052 Metallo-dependent phosphatase-like M4S28_05010 IPR006179 5'-Nucleotidase/apyrase M4S28_05015 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily M4S28_05015 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M4S28_05015 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain M4S28_05020 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M4S28_05020 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_05020 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M4S28_05020 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M4S28_05020 IPR002942 RNA-binding S4 domain M4S28_05020 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_05020 IPR036986 RNA-binding S4 domain superfamily M4S28_05025 IPR036063 Smr domain superfamily M4S28_05025 IPR002625 Smr domain M4S28_05050 IPR029018 Beta-hexosaminidase-like, domain 2 M4S28_05050 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M4S28_05050 IPR013783 Immunoglobulin-like fold M4S28_05050 IPR014756 Immunoglobulin E-set M4S28_05050 IPR017853 Glycoside hydrolase superfamily M4S28_05050 IPR015883 Glycoside hydrolase family 20, catalytic domain M4S28_05050 IPR025705 Beta-hexosaminidase M4S28_05050 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily M4S28_05050 IPR012291 CBM2, carbohydrate-binding domain superfamily M4S28_05050 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain M4S28_05050 IPR004867 Chitobiase C-terminal domain M4S28_05065 IPR001757 P-type ATPase M4S28_05065 IPR027256 P-type ATPase, subfamily IB M4S28_05065 IPR036163 Heavy metal-associated domain superfamily M4S28_05065 IPR006121 Heavy metal-associated domain, HMA M4S28_05065 IPR023298 P-type ATPase, transmembrane domain superfamily M4S28_05065 IPR023214 HAD superfamily M4S28_05065 IPR036412 HAD-like superfamily M4S28_05065 IPR008250 P-type ATPase, A domain superfamily M4S28_05065 IPR018303 P-type ATPase, phosphorylation site M4S28_05065 IPR023299 P-type ATPase, cytoplasmic domain N M4S28_05065 IPR017969 Heavy-metal-associated, conserved site M4S28_05070 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding M4S28_05070 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 M4S28_05070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_05070 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial M4S28_05070 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M4S28_05070 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M4S28_05070 IPR033910 Glutamyl-tRNA synthetase M4S28_05070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_05075 IPR016039 Thiolase-like M4S28_05075 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_05075 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 M4S28_05075 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_05075 IPR018201 Beta-ketoacyl synthase, active site M4S28_05075 IPR000794 Beta-ketoacyl synthase M4S28_05075 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_05080 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative M4S28_05080 IPR036291 NAD(P)-binding domain superfamily M4S28_05080 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_05090 IPR020615 Thiolase, acyl-enzyme intermediate active site M4S28_05090 IPR016039 Thiolase-like M4S28_05090 IPR018201 Beta-ketoacyl synthase, active site M4S28_05090 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_05090 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_05090 IPR000794 Beta-ketoacyl synthase M4S28_05090 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_05115 IPR001106 Aromatic amino acid lyase M4S28_05115 IPR024083 Fumarase/histidase, N-terminal M4S28_05115 IPR005921 Histidine ammonia-lyase M4S28_05115 IPR008948 L-Aspartase-like M4S28_05115 IPR022313 Phenylalanine/histidine ammonia-lyases, active site M4S28_05120 IPR039528 DPM1-like M4S28_05120 IPR001173 Glycosyltransferase 2-like M4S28_05120 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_05130 IPR042099 AMP-dependent synthetase-like superfamily M4S28_05130 IPR012743 4-coumarate--CoA ligase M4S28_05130 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_05130 IPR000873 AMP-dependent synthetase/ligase M4S28_05140 IPR036736 ACP-like superfamily M4S28_05140 IPR003231 Acyl carrier protein (ACP) M4S28_05140 IPR009081 Phosphopantetheine binding ACP domain M4S28_05145 IPR036736 ACP-like superfamily M4S28_05145 IPR003231 Acyl carrier protein (ACP) M4S28_05145 IPR009081 Phosphopantetheine binding ACP domain M4S28_05145 IPR006162 Phosphopantetheine attachment site M4S28_05170 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_05170 IPR006905 Flavin-dependent halogenase M4S28_05205 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M4S28_05205 IPR013974 SAF domain M4S28_05205 IPR039246 Flagellar protein FlgA M4S28_05210 IPR024181 Chemotaxis response regulator CheV M4S28_05210 IPR001789 Signal transduction response regulator, receiver domain M4S28_05210 IPR002545 CheW-like domain M4S28_05210 IPR036061 CheW-like domain superfamily M4S28_05210 IPR011006 CheY-like superfamily M4S28_05215 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal M4S28_05215 IPR000780 MCP methyltransferase, CheR-type M4S28_05215 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal M4S28_05215 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily M4S28_05215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_05220 IPR006300 Flagellar basal-body rod protein FlgB M4S28_05220 IPR019776 Flagellar basal body rod protein, conserved site M4S28_05220 IPR001444 Flagellar basal body rod protein, N-terminal M4S28_05225 IPR001444 Flagellar basal body rod protein, N-terminal M4S28_05225 IPR019776 Flagellar basal body rod protein, conserved site M4S28_05225 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M4S28_05225 IPR006299 Flagellar basal-body rod protein FlgC M4S28_05230 IPR005648 Flagellar hook capping protein M4S28_05230 IPR025965 FlgD Ig-like domain M4S28_05230 IPR025963 FlgD Tudor-like domain M4S28_05235 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M4S28_05235 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M4S28_05235 IPR011491 Flagellar hook protein FlgE M4S28_05235 IPR037058 Flagellar hook protein FlgE superfamily M4S28_05235 IPR001444 Flagellar basal body rod protein, N-terminal M4S28_05235 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M4S28_05235 IPR019776 Flagellar basal body rod protein, conserved site M4S28_05240 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M4S28_05240 IPR019776 Flagellar basal body rod protein, conserved site M4S28_05240 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M4S28_05240 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M4S28_05240 IPR001444 Flagellar basal body rod protein, N-terminal M4S28_05245 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M4S28_05245 IPR019776 Flagellar basal body rod protein, conserved site M4S28_05245 IPR001444 Flagellar basal body rod protein, N-terminal M4S28_05245 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M4S28_05245 IPR012834 Flagellar basal-body rod FlgG M4S28_05245 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M4S28_05250 IPR000527 Flagellar L-ring protein M4S28_05255 IPR001782 Flagellar P-ring protein M4S28_05260 IPR019301 Flagellar protein FlgJ, N-terminal M4S28_05260 IPR013377 Peptidoglycan hydrolase FlgJ M4S28_05260 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain M4S28_05265 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M4S28_05265 IPR002371 Flagellar hook-associated protein 1 M4S28_05265 IPR010810 Flagellin hook, IN motif M4S28_05275 IPR010810 Flagellin hook, IN motif M4S28_05275 IPR001492 Flagellin M4S28_05275 IPR042187 Flagellin, C-terminal domain, subdomain 2 M4S28_05275 IPR001029 Flagellin, D0/D1 domain M4S28_05285 IPR001492 Flagellin M4S28_05285 IPR042187 Flagellin, C-terminal domain, subdomain 2 M4S28_05285 IPR001029 Flagellin, D0/D1 domain M4S28_05285 IPR010810 Flagellin hook, IN motif M4S28_05290 IPR001492 Flagellin M4S28_05290 IPR042187 Flagellin, C-terminal domain, subdomain 2 M4S28_05290 IPR001029 Flagellin, D0/D1 domain M4S28_05290 IPR010810 Flagellin hook, IN motif M4S28_05295 IPR005186 FlaG protein M4S28_05295 IPR035924 FlaG-like superfamily M4S28_05300 IPR010810 Flagellin hook, IN motif M4S28_05300 IPR040026 Flagellar hook-associated protein 2 M4S28_05300 IPR010809 Flagellar hook-associated protein 2, C-terminal M4S28_05300 IPR003481 Flagellar hook-associated protein 2, N-terminal M4S28_05310 IPR003713 Flagellar protein FliS M4S28_05310 IPR036584 Flagellar protein FliS superfamily M4S28_05315 IPR025944 Sigma-54 interaction domain, conserved site M4S28_05315 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_05315 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_05315 IPR003593 AAA+ ATPase domain M4S28_05315 IPR011006 CheY-like superfamily M4S28_05315 IPR010518 Flagellar regulatory FleQ M4S28_05315 IPR009057 Homeobox-like domain superfamily M4S28_05315 IPR002197 DNA binding HTH domain, Fis-type M4S28_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05315 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_05320 IPR005467 Histidine kinase domain M4S28_05320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_05320 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_05320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_05320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_05320 IPR000014 PAS domain M4S28_05320 IPR035965 PAS domain superfamily M4S28_05320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_05325 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_05325 IPR029995 Transcriptional activator SfnR/FlbD M4S28_05325 IPR025944 Sigma-54 interaction domain, conserved site M4S28_05325 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_05325 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_05325 IPR001789 Signal transduction response regulator, receiver domain M4S28_05325 IPR009057 Homeobox-like domain superfamily M4S28_05325 IPR002197 DNA binding HTH domain, Fis-type M4S28_05325 IPR011006 CheY-like superfamily M4S28_05325 IPR003593 AAA+ ATPase domain M4S28_05325 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05330 IPR001624 Flagellar hook-basal body complex protein FliE M4S28_05335 IPR006182 Secretory protein YscJ/FliF M4S28_05335 IPR000067 Flagellar M-ring protein FliF M4S28_05335 IPR013556 Flagellar M-ring C-terminal M4S28_05340 IPR000090 Flagellar motor switch protein FliG M4S28_05340 IPR023087 Flagellar motor switch protein FliG, C-terminal M4S28_05340 IPR011002 Flagellar motor switch protein FliG, alpha-helical M4S28_05340 IPR032779 Flagellar motor switch protein FliG, middle domain M4S28_05340 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M4S28_05350 IPR005714 ATPase, type III secretion system, FliI/YscN M4S28_05350 IPR020005 Flagellar export ATPase FliI, clade 1 M4S28_05350 IPR040627 T3SS EscN ATPase, C-terminal M4S28_05350 IPR032463 ATPase, type III secretion system, FliI M4S28_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05350 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M4S28_05350 IPR003593 AAA+ ATPase domain M4S28_05350 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_05370 IPR001543 Surface presentation of antigen (SpoA) M4S28_05370 IPR028976 CheC-like superfamily M4S28_05370 IPR001689 Flagellar motor switch protein FliM M4S28_05370 IPR036429 SpoA-like superfamily M4S28_05375 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb M4S28_05375 IPR036429 SpoA-like superfamily M4S28_05375 IPR001543 Surface presentation of antigen (SpoA) M4S28_05375 IPR012826 Flagellar motor switch FliN M4S28_05380 IPR022781 Flagellar biosynthesis protein, FliO M4S28_05385 IPR005837 Flagellar transport protein FliP M4S28_05385 IPR005838 Type III secretion system inner membrane P protein M4S28_05390 IPR002191 Bacterial export protein family 3 M4S28_05390 IPR006305 Flagellar biosynthesis protein FliQ M4S28_05395 IPR006303 Flagellar biosynthesis protein FliR M4S28_05395 IPR002010 Type III secretion system inner membrane R protein M4S28_05400 IPR006136 Flagellar biosynthetic protein FlhB M4S28_05400 IPR006135 Type III secretion system substrate exporter M4S28_05400 IPR029025 Type III secretion system substrate exporter, C-terminal M4S28_05405 IPR001712 Type III secretion system FHIPEP M4S28_05405 IPR006301 Flagellar biosynthesis protein FlhA M4S28_05405 IPR025505 FHIPEP conserved site M4S28_05405 IPR042193 FHIPEP, domain 3 M4S28_05405 IPR042194 FHIPEP, domain 1 M4S28_05405 IPR042196 FHIPEP, domain 4 M4S28_05410 IPR003593 AAA+ ATPase domain M4S28_05410 IPR020006 Flagellar biosynthesis protein FlhF M4S28_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05410 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M4S28_05415 IPR025501 ATP binding protein MinD M4S28_05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05415 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M4S28_05420 IPR028617 RNA polymerase sigma factor FliA M4S28_05420 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_05420 IPR012845 RNA polymerase sigma factor, FliA/WhiG M4S28_05420 IPR013325 RNA polymerase sigma factor, region 2 M4S28_05420 IPR007624 RNA polymerase sigma-70 region 3 M4S28_05420 IPR007630 RNA polymerase sigma-70 region 4 M4S28_05420 IPR014284 RNA polymerase sigma-70 like domain M4S28_05420 IPR000943 RNA polymerase sigma-70 M4S28_05420 IPR007627 RNA polymerase sigma-70 region 2 M4S28_05425 IPR011006 CheY-like superfamily M4S28_05425 IPR001789 Signal transduction response regulator, receiver domain M4S28_05430 IPR007439 Chemotaxis phosphatase, CheZ M4S28_05435 IPR001789 Signal transduction response regulator, receiver domain M4S28_05435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_05435 IPR036641 HPT domain superfamily M4S28_05435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_05435 IPR005467 Histidine kinase domain M4S28_05435 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_05435 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_05435 IPR011006 CheY-like superfamily M4S28_05435 IPR002545 CheW-like domain M4S28_05435 IPR036061 CheW-like domain superfamily M4S28_05435 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily M4S28_05435 IPR004105 Histidine kinase CheA-like, homodimeric domain M4S28_05435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_05440 IPR001789 Signal transduction response regulator, receiver domain M4S28_05440 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type M4S28_05440 IPR011006 CheY-like superfamily M4S28_05440 IPR035909 Methylesterase CheB, C-terminal M4S28_05440 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase M4S28_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05445 IPR025669 AAA domain M4S28_05455 IPR039315 Chemotaxis protein CheW M4S28_05455 IPR036061 CheW-like domain superfamily M4S28_05455 IPR002545 CheW-like domain M4S28_05465 IPR003593 AAA+ ATPase domain M4S28_05465 IPR003439 ABC transporter-like M4S28_05465 IPR017871 ABC transporter, conserved site M4S28_05465 IPR005895 ABC transporter, haem export, CcmA M4S28_05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05470 IPR003544 Cytochrome c-type biogenesis protein CcmB M4S28_05470 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M4S28_05475 IPR003557 Cytochrome c-type biogenesis protein CcmC M4S28_05475 IPR002541 Cytochrome c assembly protein M4S28_05480 IPR007078 Haem exporter protein D (CcmD) M4S28_05485 IPR036127 CcmE-like superfamily M4S28_05485 IPR004329 CcmE/CycJ protein M4S28_05490 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M4S28_05490 IPR002541 Cytochrome c assembly protein M4S28_05490 IPR003567 Cytochrome c-type biogenesis protein M4S28_05490 IPR003568 Cytochrome c-type biogenesis protein CcmF M4S28_05495 IPR013740 Redoxin M4S28_05495 IPR036249 Thioredoxin-like superfamily M4S28_05495 IPR017937 Thioredoxin, conserved site M4S28_05495 IPR013766 Thioredoxin domain M4S28_05495 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE M4S28_05500 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_05500 IPR019734 Tetratricopeptide repeat M4S28_05500 IPR017560 Cytochrome c-type biogenesis protein CcmI M4S28_05500 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M4S28_05500 IPR005616 CcmH/CycL/Ccl2/NrfF family M4S28_05500 IPR013026 Tetratricopeptide repeat-containing domain M4S28_05505 IPR005616 CcmH/CycL/Ccl2/NrfF family M4S28_05505 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M4S28_05505 IPR013026 Tetratricopeptide repeat-containing domain M4S28_05505 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_05505 IPR019734 Tetratricopeptide repeat M4S28_05510 IPR007428 MlaA lipoprotein M4S28_05515 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M4S28_05515 IPR042117 OMPP1/FadL/TodX superfamily M4S28_05520 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M4S28_05520 IPR042117 OMPP1/FadL/TodX superfamily M4S28_05530 IPR039425 RNA polymerase sigma-70 like M4S28_05530 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site M4S28_05530 IPR014284 RNA polymerase sigma-70 like domain M4S28_05530 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 M4S28_05530 IPR013325 RNA polymerase sigma factor, region 2 M4S28_05530 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_05530 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_05530 IPR007627 RNA polymerase sigma-70 region 2 M4S28_05535 IPR012806 Acetyl-CoA C-acyltransferase FadI M4S28_05535 IPR002155 Thiolase M4S28_05535 IPR016039 Thiolase-like M4S28_05535 IPR020617 Thiolase, C-terminal M4S28_05535 IPR020613 Thiolase, conserved site M4S28_05535 IPR020616 Thiolase, N-terminal M4S28_05540 IPR036291 NAD(P)-binding domain superfamily M4S28_05540 IPR012802 Fatty oxidation complex, alpha subunit FadJ M4S28_05540 IPR001753 Enoyl-CoA hydratase/isomerase M4S28_05540 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M4S28_05540 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site M4S28_05540 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_05540 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal M4S28_05540 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding M4S28_05540 IPR029045 ClpP/crotonase-like domain superfamily M4S28_05545 IPR032632 Peptidase M16, middle/third domain M4S28_05545 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M4S28_05545 IPR001431 Peptidase M16, zinc-binding site M4S28_05545 IPR007863 Peptidase M16, C-terminal M4S28_05545 IPR011765 Peptidase M16, N-terminal M4S28_05550 IPR013078 Histidine phosphatase superfamily, clade-1 M4S28_05550 IPR004449 Phosphohistidine phosphatase SixA M4S28_05550 IPR029033 Histidine phosphatase superfamily M4S28_05555 IPR022990 Uncharacterised protein family UPF0115 M4S28_05555 IPR002625 Smr domain M4S28_05555 IPR036063 Smr domain superfamily M4S28_05560 IPR007848 Methyltransferase small domain M4S28_05560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_05560 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase M4S28_05560 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific M4S28_05560 IPR004556 Methyltransferase HemK-like M4S28_05560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_05565 IPR004778 Homoserine/Threonine efflux protein M4S28_05565 IPR001123 Amino acid exporter protein, LeuE-type M4S28_05570 IPR003846 Protein adenylyltransferase SelO M4S28_05575 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_05575 IPR039420 Transcriptional regulatory protein WalR-like M4S28_05575 IPR001789 Signal transduction response regulator, receiver domain M4S28_05575 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_05575 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_05575 IPR011006 CheY-like superfamily M4S28_05580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_05580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_05580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_05580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_05580 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_05580 IPR005467 Histidine kinase domain M4S28_05580 IPR003660 HAMP domain M4S28_05585 IPR006059 Bacterial extracellular solute-binding protein M4S28_05590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_05590 IPR035906 MetI-like superfamily M4S28_05595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_05595 IPR035906 MetI-like superfamily M4S28_05595 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE M4S28_05600 IPR005116 Transport-associated OB, type 1 M4S28_05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05600 IPR017871 ABC transporter, conserved site M4S28_05600 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_05600 IPR003439 ABC transporter-like M4S28_05600 IPR040582 MalK, OB fold domain M4S28_05600 IPR003593 AAA+ ATPase domain M4S28_05610 IPR030394 HflX-type guanine nucleotide-binding (G) domain M4S28_05610 IPR032305 GTP-binding protein, middle domain M4S28_05610 IPR006073 GTP binding domain M4S28_05610 IPR016496 GTPase HflX M4S28_05610 IPR025121 GTPase HflX, N-terminal M4S28_05610 IPR042108 GTPase HflX, N-terminal domain superfamily M4S28_05610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05615 IPR014179 PfaD family protein M4S28_05615 IPR004136 Nitronate monooxygenase M4S28_05615 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M4S28_05615 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_05615 IPR013785 Aldolase-type TIM barrel M4S28_05615 IPR014043 Acyl transferase M4S28_05615 IPR001227 Acyl transferase domain superfamily M4S28_05615 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type M4S28_05620 IPR016039 Thiolase-like M4S28_05620 IPR006162 Phosphopantetheine attachment site M4S28_05620 IPR009081 Phosphopantetheine binding ACP domain M4S28_05620 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M4S28_05620 IPR013968 Polyketide synthase, ketoreductase domain M4S28_05620 IPR042104 Polyketide synthase, dehydratase domain superfamily M4S28_05620 IPR020807 Polyketide synthase, dehydratase domain M4S28_05620 IPR032821 Ketoacyl-synthetase, C-terminal extension M4S28_05620 IPR036291 NAD(P)-binding domain superfamily M4S28_05620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M4S28_05620 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_05620 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_05620 IPR018201 Beta-ketoacyl synthase, active site M4S28_05620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_05620 IPR014043 Acyl transferase M4S28_05620 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_05620 IPR036736 ACP-like superfamily M4S28_05630 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M4S28_05630 IPR036736 ACP-like superfamily M4S28_05630 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_05630 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_05630 IPR020807 Polyketide synthase, dehydratase domain M4S28_05630 IPR042104 Polyketide synthase, dehydratase domain superfamily M4S28_05630 IPR013968 Polyketide synthase, ketoreductase domain M4S28_05630 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M4S28_05630 IPR009081 Phosphopantetheine binding ACP domain M4S28_05630 IPR006162 Phosphopantetheine attachment site M4S28_05630 IPR016039 Thiolase-like M4S28_05630 IPR036291 NAD(P)-binding domain superfamily M4S28_05630 IPR032821 Ketoacyl-synthetase, C-terminal extension M4S28_05630 IPR014043 Acyl transferase M4S28_05630 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_05630 IPR018201 Beta-ketoacyl synthase, active site M4S28_05630 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_05635 IPR008278 4'-phosphopantetheinyl transferase domain M4S28_05635 IPR037143 4'-phosphopantetheinyl transferase domain superfamily M4S28_05635 IPR004568 Phosphopantetheine-protein transferase domain M4S28_05645 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_05645 IPR004682 TRAP transporter solute receptor, DctP family M4S28_05645 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_05650 IPR007387 TRAP transporter, small membrane protein DctQ M4S28_05655 IPR004681 TRAP transporter large membrane protein DctM M4S28_05655 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_05665 IPR025944 Sigma-54 interaction domain, conserved site M4S28_05665 IPR009057 Homeobox-like domain superfamily M4S28_05665 IPR002197 DNA binding HTH domain, Fis-type M4S28_05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05665 IPR001789 Signal transduction response regulator, receiver domain M4S28_05665 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_05665 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_05665 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_05665 IPR003593 AAA+ ATPase domain M4S28_05665 IPR011006 CheY-like superfamily M4S28_05670 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M4S28_05670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_05670 IPR029151 Periplasmic sensor-like domain superfamily M4S28_05670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_05670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_05670 IPR005467 Histidine kinase domain M4S28_05670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_05670 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_05670 IPR033479 Double Cache domain 1 M4S28_05675 IPR027304 Trigger factor/SurA domain superfamily M4S28_05675 IPR036611 Trigger factor ribosome-binding domain superfamily M4S28_05675 IPR008881 Trigger factor, ribosome-binding, bacterial M4S28_05675 IPR008880 Trigger factor, C-terminal M4S28_05675 IPR005215 Trigger factor M4S28_05675 IPR037041 Trigger factor, C-terminal domain superfamily M4S28_05675 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_05680 IPR018215 ClpP, Ser active site M4S28_05680 IPR033135 ClpP, histidine active site M4S28_05680 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA M4S28_05680 IPR029045 ClpP/crotonase-like domain superfamily M4S28_05680 IPR001907 ATP-dependent Clp protease proteolytic subunit M4S28_05685 IPR003593 AAA+ ATPase domain M4S28_05685 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05685 IPR003959 ATPase, AAA-type, core M4S28_05685 IPR019489 Clp ATPase, C-terminal M4S28_05685 IPR004487 Clp protease, ATP-binding subunit ClpX M4S28_05685 IPR038366 Zinc finger, ClpX C4-type superfamily M4S28_05685 IPR010603 Zinc finger, ClpX C4-type M4S28_05690 IPR008269 Peptidase S16, Lon proteolytic domain M4S28_05690 IPR003593 AAA+ ATPase domain M4S28_05690 IPR003959 ATPase, AAA-type, core M4S28_05690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_05690 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_05690 IPR027543 Lon protease, bacterial M4S28_05690 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05690 IPR003111 Lon, substrate-binding domain M4S28_05690 IPR027065 Lon protease M4S28_05690 IPR004815 Lon protease, bacterial/eukaryotic-type M4S28_05690 IPR015947 PUA-like superfamily M4S28_05695 IPR000119 Histone-like DNA-binding protein M4S28_05695 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_05695 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_05700 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M4S28_05700 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site M4S28_05700 IPR027304 Trigger factor/SurA domain superfamily M4S28_05705 IPR004509 Competence protein ComEA, helix-hairpin-helix domain M4S28_05705 IPR010994 RuvA domain 2-like M4S28_05720 IPR006261 dNTP triphosphohydrolase M4S28_05720 IPR023023 dNTP triphosphohydrolase, type 2 M4S28_05720 IPR003607 HD/PDEase domain M4S28_05720 IPR006674 HD domain M4S28_05720 IPR026875 Phosphohydrolase-associated domain M4S28_05725 IPR003607 HD/PDEase domain M4S28_05725 IPR022971 5'-deoxynucleotidase YfbR M4S28_05725 IPR039356 Metal-dependent nucleoside 5'-monophosphatase M4S28_05730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_05730 IPR004839 Aminotransferase, class I/classII M4S28_05730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_05730 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_05735 IPR005801 ADC synthase M4S28_05735 IPR034681 Isochorismate synthase MenF M4S28_05735 IPR004561 Isochorismate synthase M4S28_05735 IPR015890 Chorismate-utilising enzyme, C-terminal M4S28_05740 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_05740 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_05740 IPR029061 Thiamin diphosphate-binding fold M4S28_05740 IPR032264 Menaquinone biosynthesis protein MenD, middle domain M4S28_05740 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase M4S28_05740 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_05745 IPR029058 Alpha/Beta hydrolase fold M4S28_05745 IPR000073 Alpha/beta hydrolase fold-1 M4S28_05745 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase M4S28_05750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M4S28_05750 IPR014748 Enoyl-CoA hydratase, C-terminal M4S28_05750 IPR001753 Enoyl-CoA hydratase/isomerase M4S28_05750 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB M4S28_05750 IPR029045 ClpP/crotonase-like domain superfamily M4S28_05755 IPR010196 o-Succinylbenzoate synthase, MenC type1 M4S28_05755 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M4S28_05755 IPR029065 Enolase C-terminal domain-like M4S28_05755 IPR029017 Enolase-like, N-terminal M4S28_05755 IPR036849 Enolase-like, C-terminal domain superfamily M4S28_05760 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_05760 IPR010192 2-succinylbenzoate--CoA ligase M4S28_05760 IPR000873 AMP-dependent synthetase/ligase M4S28_05760 IPR042099 AMP-dependent synthetase-like superfamily M4S28_05760 IPR020845 AMP-binding, conserved site M4S28_05770 IPR018383 Uncharacterised protein family UPF0324, prokaryote M4S28_05775 IPR036259 MFS transporter superfamily M4S28_05775 IPR011701 Major facilitator superfamily M4S28_05775 IPR023727 Lysophospholipid transporter LplT M4S28_05830 IPR006143 RND efflux pump, membrane fusion protein M4S28_05830 IPR022824 Multidrug resistance protein MdtA M4S28_05830 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_05835 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_05835 IPR001036 Acriflavin resistance protein M4S28_05845 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_05845 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site M4S28_05845 IPR005858 Cysteine synthase CysM M4S28_05845 IPR005856 Cysteine synthase M4S28_05845 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_05850 IPR019888 Transcription regulator AsnC-type M4S28_05850 IPR011008 Dimeric alpha-beta barrel M4S28_05850 IPR000485 AsnC-type HTH domain M4S28_05850 IPR011991 ArsR-like helix-turn-helix domain M4S28_05850 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_05850 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_05850 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_05850 IPR036390 Winged helix DNA-binding domain superfamily M4S28_05860 IPR029069 HotDog domain superfamily M4S28_05860 IPR003703 Acyl-CoA thioesterase M4S28_05865 IPR039366 YscW/ExsB M4S28_05870 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_05870 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M4S28_05870 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M4S28_05885 IPR018062 HTH domain AraC-type, conserved site M4S28_05885 IPR035451 Ada-like domain superfamily M4S28_05885 IPR018060 DNA binding HTH domain, AraC-type M4S28_05885 IPR009057 Homeobox-like domain superfamily M4S28_05885 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_05885 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M4S28_05885 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M4S28_05885 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M4S28_05885 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M4S28_05885 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M4S28_05885 IPR004026 Ada DNA repair, metal-binding M4S28_05885 IPR016221 Bifunctional regulatory protein Ada M4S28_05915 IPR008523 Protein of unknown function DUF805 M4S28_05925 IPR012337 Ribonuclease H-like superfamily M4S28_05925 IPR036397 Ribonuclease H superfamily M4S28_05925 IPR017290 Ribonuclease H, Bacteroides-type M4S28_05925 IPR037056 Ribonuclease H1, N-terminal domain superfamily M4S28_05925 IPR011320 Ribonuclease H1, N-terminal M4S28_05925 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M4S28_05930 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M4S28_05930 IPR001296 Glycosyl transferase, family 1 M4S28_05935 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_05935 IPR001173 Glycosyltransferase 2-like M4S28_05970 IPR029759 Glutathione peroxidase active site M4S28_05970 IPR000889 Glutathione peroxidase M4S28_05970 IPR036249 Thioredoxin-like superfamily M4S28_05975 IPR010232 Probable protein kinase UbiB M4S28_05975 IPR000719 Protein kinase domain M4S28_05975 IPR011009 Protein kinase-like domain superfamily M4S28_05975 IPR004147 UbiB domain M4S28_05990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_05990 IPR002197 DNA binding HTH domain, Fis-type M4S28_05990 IPR011006 CheY-like superfamily M4S28_05990 IPR009057 Homeobox-like domain superfamily M4S28_05990 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_05990 IPR001789 Signal transduction response regulator, receiver domain M4S28_05990 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_05990 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_05990 IPR025944 Sigma-54 interaction domain, conserved site M4S28_05990 IPR003593 AAA+ ATPase domain M4S28_06000 IPR002932 Glutamate synthase domain M4S28_06000 IPR024188 Glutamate synthase large subunit-like protein M4S28_06000 IPR013785 Aldolase-type TIM barrel M4S28_06010 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal M4S28_06010 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M4S28_06010 IPR001753 Enoyl-CoA hydratase/isomerase M4S28_06010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_06010 IPR012799 Fatty oxidation complex, alpha subunit FadB M4S28_06010 IPR036291 NAD(P)-binding domain superfamily M4S28_06010 IPR029045 ClpP/crotonase-like domain superfamily M4S28_06010 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding M4S28_06010 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site M4S28_06015 IPR000847 Transcription regulator HTH, LysR M4S28_06015 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06015 IPR005119 LysR, substrate-binding M4S28_06015 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06020 IPR015358 Transcription regulator MerR, DNA binding M4S28_06020 IPR010211 Redox-sensitive transcriptional activator SoxR M4S28_06020 IPR000551 MerR-type HTH domain M4S28_06020 IPR009061 Putative DNA-binding domain superfamily M4S28_06025 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M4S28_06025 IPR006879 Carbohydrate deacetylase YdjC-like M4S28_06025 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria M4S28_06030 IPR019802 Glycoside hydrolase, family 4, conserved site M4S28_06030 IPR022616 Glycosyl hydrolase, family 4, C-terminal M4S28_06030 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal M4S28_06030 IPR036291 NAD(P)-binding domain superfamily M4S28_06030 IPR001088 Glycoside hydrolase, family 4 M4S28_06035 IPR005119 LysR, substrate-binding M4S28_06035 IPR000847 Transcription regulator HTH, LysR M4S28_06035 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06035 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06060 IPR000917 Sulfatase, N-terminal M4S28_06060 IPR024607 Sulfatase, conserved site M4S28_06060 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_06065 IPR028082 Periplasmic binding protein-like I M4S28_06065 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_06065 IPR023588 Transcription regulator HTH, PurR M4S28_06065 IPR000843 LacI-type HTH domain M4S28_06080 IPR011701 Major facilitator superfamily M4S28_06080 IPR005829 Sugar transporter, conserved site M4S28_06080 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family M4S28_06080 IPR020846 Major facilitator superfamily domain M4S28_06080 IPR036259 MFS transporter superfamily M4S28_06085 IPR038377 Sodium/glucose symporter superfamily M4S28_06085 IPR001734 Sodium/solute symporter M4S28_06085 IPR018212 Sodium/solute symporter, conserved site M4S28_06090 IPR005131 Serine dehydratase beta chain M4S28_06090 IPR005130 Serine dehydratase-like, alpha subunit M4S28_06090 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form M4S28_06090 IPR029009 Allosteric substrate binding domain superfamily M4S28_06095 IPR011991 ArsR-like helix-turn-helix domain M4S28_06095 IPR000485 AsnC-type HTH domain M4S28_06095 IPR011008 Dimeric alpha-beta barrel M4S28_06095 IPR019888 Transcription regulator AsnC-type M4S28_06095 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_06095 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_06095 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06095 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06100 IPR004778 Homoserine/Threonine efflux protein M4S28_06100 IPR001123 Amino acid exporter protein, LeuE-type M4S28_06105 IPR036249 Thioredoxin-like superfamily M4S28_06105 IPR012336 Thioredoxin-like fold M4S28_06105 IPR002109 Glutaredoxin M4S28_06105 IPR023753 FAD/NAD(P)-binding domain M4S28_06105 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M4S28_06105 IPR012081 Alkyl hydroperoxide reductase subunit F M4S28_06105 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_06110 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M4S28_06110 IPR024706 Peroxiredoxin, AhpC-type M4S28_06110 IPR019479 Peroxiredoxin, C-terminal M4S28_06110 IPR036249 Thioredoxin-like superfamily M4S28_06110 IPR013766 Thioredoxin domain M4S28_06110 IPR017559 Alkyl hydroperoxide reductase subunit C M4S28_06120 IPR006042 Xanthine/uracil permease M4S28_06120 IPR006043 Xanthine/uracil/vitamin C permease M4S28_06125 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06125 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06125 IPR000847 Transcription regulator HTH, LysR M4S28_06125 IPR005119 LysR, substrate-binding M4S28_06130 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_06130 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_06130 IPR036291 NAD(P)-binding domain superfamily M4S28_06135 IPR036680 Sporulation-like domain superfamily M4S28_06135 IPR012997 Rare lipoprotein A M4S28_06135 IPR036908 RlpA-like domain superfamily M4S28_06135 IPR034718 Endolytic peptidoglycan transglycosylase RlpA M4S28_06135 IPR009009 RlpA-like protein, double-psi beta-barrel domain M4S28_06135 IPR007730 Sporulation-like domain M4S28_06150 IPR038763 DHH phosphoesterase superfamily M4S28_06150 IPR001667 DDH domain M4S28_06150 IPR038222 DHHA2 domain superfamily M4S28_06150 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable M4S28_06150 IPR004097 DHHA2 domain M4S28_06165 IPR000847 Transcription regulator HTH, LysR M4S28_06165 IPR005119 LysR, substrate-binding M4S28_06165 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06165 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06190 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_06190 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_06190 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_06190 IPR023753 FAD/NAD(P)-binding domain M4S28_06195 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_06195 IPR001991 Sodium:dicarboxylate symporter M4S28_06200 IPR032466 Metal-dependent hydrolase M4S28_06200 IPR026912 Adenine deaminase C-terminal domain M4S28_06200 IPR006679 Adenine deaminase M4S28_06200 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_06200 IPR006680 Amidohydrolase-related M4S28_06215 IPR006680 Amidohydrolase-related M4S28_06215 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_06215 IPR005920 Imidazolonepropionase M4S28_06215 IPR032466 Metal-dependent hydrolase M4S28_06225 IPR020449 Transcription regulator HTH, AraC- type M4S28_06225 IPR018060 DNA binding HTH domain, AraC-type M4S28_06225 IPR014710 RmlC-like jelly roll fold M4S28_06225 IPR018062 HTH domain AraC-type, conserved site M4S28_06225 IPR037923 Transcription regulator HTH-like M4S28_06225 IPR009057 Homeobox-like domain superfamily M4S28_06225 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_06225 IPR023699 Transcription activator HTH, RhaR M4S28_06230 IPR012674 Calycin M4S28_06230 IPR022271 Lipocalin, ApoD type M4S28_06230 IPR002446 Lipocalin, bacterial M4S28_06230 IPR022272 Lipocalin family conserved site M4S28_06230 IPR000566 Lipocalin/cytosolic fatty-acid binding domain M4S28_06245 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06245 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06245 IPR000847 Transcription regulator HTH, LysR M4S28_06245 IPR005119 LysR, substrate-binding M4S28_06245 IPR012787 Pca transcription factor PcaQ M4S28_06250 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal M4S28_06250 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M4S28_06250 IPR009057 Homeobox-like domain superfamily M4S28_06250 IPR001647 DNA-binding HTH domain, TetR-type M4S28_06250 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_06260 IPR001036 Acriflavin resistance protein M4S28_06260 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M4S28_06260 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_06265 IPR002429 Cytochrome c oxidase subunit II-like C-terminal M4S28_06265 IPR010514 COX aromatic rich motif M4S28_06265 IPR008972 Cupredoxin M4S28_06265 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain M4S28_06265 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain M4S28_06265 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily M4S28_06265 IPR006333 Cytochrome o ubiquinol oxidase subunit II M4S28_06270 IPR014207 Cytochrome o ubiquinol oxidase, subunit I M4S28_06270 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site M4S28_06270 IPR000883 Cytochrome c oxidase subunit I M4S28_06270 IPR023616 Cytochrome c oxidase-like, subunit I domain M4S28_06270 IPR036927 Cytochrome c oxidase-like, subunit I superfamily M4S28_06275 IPR024791 Cytochrome c oxidase subunit III M4S28_06275 IPR000298 Cytochrome c oxidase subunit III-like M4S28_06275 IPR035973 Cytochrome c oxidase subunit III-like superfamily M4S28_06275 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle M4S28_06275 IPR014206 Cytochrome o ubiquinol oxidase, subunit III M4S28_06275 IPR033946 Ubiquinol oxidase subunit III domain M4S28_06280 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes M4S28_06280 IPR014210 Cytochrome o ubiquinol oxidase subunit IV M4S28_06285 IPR006369 Protohaem IX farnesyltransferase M4S28_06285 IPR000537 UbiA prenyltransferase family M4S28_06285 IPR030470 UbiA prenyltransferase conserved site M4S28_06295 IPR001279 Metallo-beta-lactamase M4S28_06295 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_06295 IPR029228 Alkyl sulfatase dimerisation domain M4S28_06295 IPR036527 SCP2 sterol-binding domain superfamily M4S28_06295 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily M4S28_06295 IPR029229 Alkyl sulfatase, C-terminal M4S28_06310 IPR042117 OMPP1/FadL/TodX superfamily M4S28_06310 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M4S28_06315 IPR000847 Transcription regulator HTH, LysR M4S28_06315 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06315 IPR005119 LysR, substrate-binding M4S28_06315 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06320 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_06320 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_06320 IPR004361 Glyoxalase I M4S28_06320 IPR018146 Glyoxalase I, conserved site M4S28_06320 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_06325 IPR013785 Aldolase-type TIM barrel M4S28_06325 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M4S28_06340 IPR029000 Cyclophilin-like domain superfamily M4S28_06340 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase M4S28_06340 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site M4S28_06340 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M4S28_06345 IPR036249 Thioredoxin-like superfamily M4S28_06345 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M4S28_06345 IPR013766 Thioredoxin domain M4S28_06345 IPR001853 DSBA-like thioredoxin domain M4S28_06360 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M4S28_06360 IPR005940 Anthranilate phosphoribosyl transferase M4S28_06360 IPR000312 Glycosyl transferase, family 3 M4S28_06360 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M4S28_06360 IPR017459 Glycosyl transferase family 3, N-terminal domain M4S28_06375 IPR002646 Poly A polymerase, head domain M4S28_06375 IPR000644 CBS domain M4S28_06375 IPR038763 DHH phosphoesterase superfamily M4S28_06380 IPR002528 Multi antimicrobial extrusion protein M4S28_06385 IPR018303 P-type ATPase, phosphorylation site M4S28_06385 IPR023298 P-type ATPase, transmembrane domain superfamily M4S28_06385 IPR008250 P-type ATPase, A domain superfamily M4S28_06385 IPR036412 HAD-like superfamily M4S28_06385 IPR023214 HAD superfamily M4S28_06385 IPR017969 Heavy-metal-associated, conserved site M4S28_06385 IPR006121 Heavy metal-associated domain, HMA M4S28_06385 IPR036163 Heavy metal-associated domain superfamily M4S28_06385 IPR001757 P-type ATPase M4S28_06385 IPR023299 P-type ATPase, cytoplasmic domain N M4S28_06385 IPR027256 P-type ATPase, subfamily IB M4S28_06390 IPR018016 Nucleoside phosphorylase, conserved site M4S28_06390 IPR000845 Nucleoside phosphorylase domain M4S28_06390 IPR035994 Nucleoside phosphorylase superfamily M4S28_06390 IPR010058 Uridine phosphorylase M4S28_06400 IPR004090 Chemotaxis methyl-accepting receptor M4S28_06400 IPR003660 HAMP domain M4S28_06400 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_06405 IPR019808 Histidine triad, conserved site M4S28_06405 IPR001310 Histidine triad (HIT) protein M4S28_06405 IPR011146 HIT-like domain M4S28_06405 IPR036265 HIT-like superfamily M4S28_06420 IPR012640 Membrane lipoprotein, lipid attachment site M4S28_06420 IPR014094 Penicillin-binding protein activator LpoB M4S28_06430 IPR029058 Alpha/Beta hydrolase fold M4S28_06430 IPR022987 Uncharacterised protein family UPF0227 M4S28_06430 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M4S28_06435 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_06435 IPR023753 FAD/NAD(P)-binding domain M4S28_06450 IPR041471 UvrB, interaction domain M4S28_06450 IPR005118 Transcription-repair-coupling factor, C-terminal domain M4S28_06450 IPR037235 TRCF-like, C-terminal domain M4S28_06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06450 IPR004576 Transcription-repair coupling factor M4S28_06450 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_06450 IPR011545 DEAD/DEAH box helicase domain M4S28_06450 IPR003711 CarD-like/TRCF domain M4S28_06450 IPR036101 CarD-like/TRCF domain superfamily M4S28_06450 IPR001650 Helicase, C-terminal M4S28_06460 IPR003838 ABC transporter permease protein domain M4S28_06460 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E M4S28_06460 IPR025857 MacB-like periplasmic core domain M4S28_06465 IPR017871 ABC transporter, conserved site M4S28_06465 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06465 IPR011924 Lipoprotein releasing system, ATP-binding protein M4S28_06465 IPR003439 ABC transporter-like M4S28_06465 IPR003593 AAA+ ATPase domain M4S28_06465 IPR015854 ABC transporter, lipoprotein release, LolD M4S28_06470 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type M4S28_06470 IPR003838 ABC transporter permease protein domain M4S28_06470 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E M4S28_06470 IPR025857 MacB-like periplasmic core domain M4S28_06480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_06480 IPR001279 Metallo-beta-lactamase M4S28_06480 IPR035681 ComA-like, MBL domain M4S28_06480 IPR004477 ComEC/Rec2-related protein M4S28_06480 IPR004797 Competence protein ComEC/Rec2 M4S28_06485 IPR003593 AAA+ ATPase domain M4S28_06485 IPR011527 ABC transporter type 1, transmembrane domain M4S28_06485 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_06485 IPR003439 ABC transporter-like M4S28_06485 IPR017871 ABC transporter, conserved site M4S28_06485 IPR011917 ABC transporter, lipid A export, MsbA M4S28_06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06485 IPR039421 Type I protein exporter M4S28_06490 IPR003758 Tetraacyldisaccharide 4'-kinase M4S28_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06495 IPR005651 Trm112-like M4S28_06500 IPR003329 Acylneuraminate cytidylyltransferase M4S28_06500 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase M4S28_06500 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_06505 IPR003136 Cytidylate kinase M4S28_06505 IPR011994 Cytidylate kinase domain M4S28_06505 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06510 IPR003029 S1 domain M4S28_06510 IPR022967 RNA-binding domain, S1 M4S28_06510 IPR012340 Nucleic acid-binding, OB-fold M4S28_06510 IPR000110 Ribosomal protein S1 M4S28_06515 IPR000119 Histone-like DNA-binding protein M4S28_06515 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_06515 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_06515 IPR005685 Integration host factor, beta subunit M4S28_06520 IPR032906 Lipopolysaccharide assembly protein A M4S28_06520 IPR010445 Lipopolysaccharide assembly protein A domain M4S28_06525 IPR041166 LapB, rubredoxin metal binding domain M4S28_06525 IPR030865 Lipopolysaccharide assembly protein B M4S28_06525 IPR013026 Tetratricopeptide repeat-containing domain M4S28_06525 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_06525 IPR019734 Tetratricopeptide repeat M4S28_06530 IPR001754 Orotidine 5'-phosphate decarboxylase domain M4S28_06530 IPR018089 Orotidine 5'-phosphate decarboxylase, active site M4S28_06530 IPR011060 Ribulose-phosphate binding barrel M4S28_06530 IPR013785 Aldolase-type TIM barrel M4S28_06530 IPR014732 Orotidine 5'-phosphate decarboxylase M4S28_06535 IPR009078 Ferritin-like superfamily M4S28_06535 IPR010386 tRNA-hydroxylase MiaE M4S28_06535 IPR012347 Ferritin-like M4S28_06545 IPR005119 LysR, substrate-binding M4S28_06545 IPR000847 Transcription regulator HTH, LysR M4S28_06545 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06545 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06555 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M4S28_06555 IPR008141 Alanine dehydrogenase M4S28_06555 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M4S28_06555 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 M4S28_06555 IPR036291 NAD(P)-binding domain superfamily M4S28_06560 IPR019888 Transcription regulator AsnC-type M4S28_06560 IPR000485 AsnC-type HTH domain M4S28_06560 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_06560 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06560 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06560 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_06560 IPR011008 Dimeric alpha-beta barrel M4S28_06560 IPR011991 ArsR-like helix-turn-helix domain M4S28_06565 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_06565 IPR036390 Winged helix DNA-binding domain superfamily M4S28_06565 IPR018541 FtsK gamma domain M4S28_06565 IPR002543 FtsK domain M4S28_06565 IPR041027 FtsK alpha domain M4S28_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06565 IPR025199 DNA translocase FtsK, 4TM region M4S28_06570 IPR029046 Lipoprotein localisation LolA/LolB/LppX M4S28_06570 IPR004564 Outer membrane lipoprotein carrier protein LolA-like M4S28_06570 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria M4S28_06575 IPR003593 AAA+ ATPase domain M4S28_06575 IPR032423 AAA C-terminal domain M4S28_06575 IPR003959 ATPase, AAA-type, core M4S28_06575 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M4S28_06575 IPR021886 MgsA AAA+ ATPase C-terminal M4S28_06575 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06580 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M4S28_06580 IPR033729 Serine-tRNA ligase catalytic core domain M4S28_06580 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M4S28_06580 IPR015866 Serine-tRNA synthetase, type1, N-terminal M4S28_06580 IPR002317 Serine-tRNA ligase, type1 M4S28_06580 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_06580 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily M4S28_06585 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M4S28_06585 IPR000962 Zinc finger, DksA/TraR C4-type M4S28_06585 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M4S28_06590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_06590 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA M4S28_06590 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_06590 IPR005814 Aminotransferase class-III M4S28_06590 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_06595 IPR010722 Biotin and thiamin synthesis-associated domain M4S28_06595 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB M4S28_06595 IPR024177 Biotin synthase M4S28_06595 IPR006638 Elp3/MiaB/NifB M4S28_06595 IPR007197 Radical SAM M4S28_06595 IPR013785 Aldolase-type TIM barrel M4S28_06600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_06600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_06600 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_06600 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria M4S28_06600 IPR004839 Aminotransferase, class I/classII M4S28_06600 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M4S28_06600 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type M4S28_06605 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC M4S28_06605 IPR013216 Methyltransferase type 11 M4S28_06605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_06610 IPR004472 Dethiobiotin synthase BioD M4S28_06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06620 IPR022919 Peptidase M48, protease HtpX, putative M4S28_06620 IPR001915 Peptidase M48 M4S28_06625 IPR024083 Fumarase/histidase, N-terminal M4S28_06625 IPR020557 Fumarate lyase, conserved site M4S28_06625 IPR000362 Fumarate lyase family M4S28_06625 IPR022761 Fumarate lyase, N-terminal M4S28_06625 IPR008948 L-Aspartase-like M4S28_06625 IPR004769 Adenylosuccinate lyase M4S28_06625 IPR013539 Adenylosuccinate lyase PurB, C-terminal M4S28_06630 IPR007451 High frequency lysogenization protein HflD M4S28_06630 IPR035932 HflD-like superfamily M4S28_06635 IPR004506 tRNA-specific 2-thiouridylase M4S28_06635 IPR023382 Adenine nucleotide alpha hydrolase-like domains M4S28_06635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_06645 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_06645 IPR011611 Carbohydrate kinase PfkB M4S28_06645 IPR029056 Ribokinase-like M4S28_06650 IPR027444 Histone-like protein H-NS, C-terminal domain M4S28_06650 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily M4S28_06650 IPR001801 Histone-like protein H-NS M4S28_06650 IPR027454 Histone-like protein H-NS, N-terminal M4S28_06655 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M4S28_06660 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M4S28_06660 IPR018198 ATP phosphoribosyltransferase, conserved site M4S28_06660 IPR001348 ATP phosphoribosyltransferase HisG M4S28_06660 IPR020621 ATP phosphoribosyltransferase HisG, long form M4S28_06660 IPR013115 Histidine biosynthesis HisG, C-terminal M4S28_06660 IPR011322 Nitrogen regulatory PII-like, alpha/beta M4S28_06660 IPR013820 ATP phosphoribosyltransferase, catalytic domain M4S28_06665 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_06665 IPR001692 Histidinol dehydrogenase, conserved site M4S28_06665 IPR022695 Histidinol dehydrogenase, monofunctional M4S28_06665 IPR012131 Histidinol dehydrogenase M4S28_06670 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M4S28_06670 IPR004839 Aminotransferase, class I/classII M4S28_06670 IPR005861 Histidinol-phosphate aminotransferase family M4S28_06670 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_06670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_06670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_06675 IPR000807 Imidazoleglycerol-phosphate dehydratase M4S28_06675 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site M4S28_06675 IPR005954 Histidinol-phosphatase M4S28_06675 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_06675 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily M4S28_06675 IPR013954 Polynucleotide kinase 3 phosphatase M4S28_06675 IPR006543 Histidinol-phosphate phosphatase M4S28_06675 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M4S28_06675 IPR020566 Histidine biosynthesis bifunctional protein HisB M4S28_06675 IPR023214 HAD superfamily M4S28_06675 IPR036412 HAD-like superfamily M4S28_06680 IPR029062 Class I glutamine amidotransferase-like M4S28_06680 IPR017926 Glutamine amidotransferase M4S28_06680 IPR010139 Imidazole glycerol phosphate synthase, subunit H M4S28_06685 IPR011060 Ribulose-phosphate binding barrel M4S28_06685 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase M4S28_06685 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA M4S28_06685 IPR013785 Aldolase-type TIM barrel M4S28_06685 IPR006062 Histidine biosynthesis M4S28_06690 IPR004651 Histidine biosynthesis, HisF M4S28_06690 IPR013785 Aldolase-type TIM barrel M4S28_06690 IPR006062 Histidine biosynthesis M4S28_06690 IPR011060 Ribulose-phosphate binding barrel M4S28_06695 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase M4S28_06695 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like M4S28_06695 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain M4S28_06695 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily M4S28_06695 IPR023019 Histidine biosynthesis bifunctional protein HisIE M4S28_06700 IPR023006 Uncharacterised protein family UPF0225 M4S28_06700 IPR004027 SEC-C motif M4S28_06700 IPR032710 NTF2-like domain superfamily M4S28_06705 IPR035919 EAL domain superfamily M4S28_06705 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M4S28_06705 IPR013976 Metal-dependent hydrolase HDOD M4S28_06705 IPR001633 EAL domain M4S28_06710 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_06710 IPR029052 Metallo-dependent phosphatase-like M4S28_06710 IPR010138 UDP-2,3-diacylglucosamine hydrolase M4S28_06715 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain M4S28_06715 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase M4S28_06715 IPR029000 Cyclophilin-like domain superfamily M4S28_06715 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site M4S28_06720 IPR015803 Cysteine-tRNA ligase M4S28_06720 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR M4S28_06720 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase M4S28_06720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_06720 IPR032678 tRNA synthetases class I, catalytic domain M4S28_06720 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_06725 IPR020633 Thymidine kinase, conserved site M4S28_06725 IPR001267 Thymidine kinase M4S28_06725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06750 IPR000292 Formate/nitrite transporter M4S28_06750 IPR024002 Formate/nitrite transporter, conserved site M4S28_06750 IPR023999 Formate transporter FocA, putative M4S28_06750 IPR023271 Aquaporin-like M4S28_06760 IPR012337 Ribonuclease H-like superfamily M4S28_06760 IPR036397 Ribonuclease H superfamily M4S28_06760 IPR001584 Integrase, catalytic core M4S28_06765 IPR003593 AAA+ ATPase domain M4S28_06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06765 IPR021542 Tn7 transposition regulator TnsC M4S28_06785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_06785 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M4S28_06785 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M4S28_06785 IPR003356 DNA methylase, adenine-specific M4S28_06785 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_06790 IPR000055 Restriction endonuclease, type I, HsdS M4S28_06800 IPR021810 Protein of unknown function DUF3387 M4S28_06800 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_06800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06800 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal M4S28_06800 IPR004473 Restriction endonuclease, type I, HsdR M4S28_06800 IPR040980 SWI2/SNF2 ATPase M4S28_06815 IPR005226 UPF0014 family M4S28_06820 IPR004448 Nitrate reductas, NapE, periplasmic M4S28_06820 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE M4S28_06825 IPR038266 NapC/NirT cytochrome c superfamily M4S28_06825 IPR036280 Multiheme cytochrome superfamily M4S28_06825 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT M4S28_06825 IPR011031 Multihaem cytochrome M4S28_06825 IPR024717 Denitrification system component NapC/NirT/NrfH M4S28_06825 IPR005126 NapC/NirT cytochrome c, N-terminal M4S28_06830 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_06830 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain M4S28_06830 IPR041460 Molybdopterin oxidoreductase, N-terminal M4S28_06830 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_06830 IPR006656 Molybdopterin oxidoreductase M4S28_06830 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M4S28_06830 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_06830 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M4S28_06830 IPR011887 Trimethylamine-N-oxide reductase TorA M4S28_06840 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable M4S28_06840 IPR038222 DHHA2 domain superfamily M4S28_06840 IPR001667 DDH domain M4S28_06840 IPR004097 DHHA2 domain M4S28_06840 IPR038763 DHH phosphoesterase superfamily M4S28_06855 IPR003593 AAA+ ATPase domain M4S28_06855 IPR003439 ABC transporter-like M4S28_06855 IPR017871 ABC transporter, conserved site M4S28_06855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06860 IPR003593 AAA+ ATPase domain M4S28_06860 IPR003439 ABC transporter-like M4S28_06860 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_06860 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06865 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M4S28_06865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_06865 IPR035906 MetI-like superfamily M4S28_06870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_06870 IPR035906 MetI-like superfamily M4S28_06875 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_06875 IPR039424 Solute-binding protein family 5 M4S28_06875 IPR023765 Solute-binding protein family 5, conserved site M4S28_06875 IPR000914 Solute-binding protein family 5 domain M4S28_06880 IPR003593 AAA+ ATPase domain M4S28_06880 IPR009057 Homeobox-like domain superfamily M4S28_06880 IPR002197 DNA binding HTH domain, Fis-type M4S28_06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06880 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_06880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_06880 IPR025944 Sigma-54 interaction domain, conserved site M4S28_06880 IPR014317 Transcription activator PspF M4S28_06885 IPR014319 Phage shock protein, PspA M4S28_06885 IPR007157 PspA/IM30 M4S28_06890 IPR009554 Phage shock protein B M4S28_06895 IPR007168 Phage shock protein, PspC, N-terminal M4S28_06895 IPR014320 Phage shock protein, PspC M4S28_06900 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_06900 IPR006143 RND efflux pump, membrane fusion protein M4S28_06905 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_06905 IPR022824 Multidrug resistance protein MdtA M4S28_06905 IPR006143 RND efflux pump, membrane fusion protein M4S28_06910 IPR001036 Acriflavin resistance protein M4S28_06910 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_06915 IPR005019 Methyladenine glycosylase M4S28_06915 IPR011257 DNA glycosylase M4S28_06915 IPR004597 DNA-3-methyladenine glycosylase I M4S28_06930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_06930 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_06930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_06930 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M4S28_06930 IPR006233 Cystathionine beta-lyase, bacterial M4S28_06935 IPR001736 Phospholipase D/Transphosphatidylase M4S28_06935 IPR022924 Cardiolipin synthase M4S28_06935 IPR030840 Cardiolipin synthase A M4S28_06935 IPR027379 Cardiolipin synthase N-terminal M4S28_06935 IPR025202 Phospholipase D-like domain M4S28_06940 IPR000175 Sodium:neurotransmitter symporter M4S28_06940 IPR037272 Sodium:neurotransmitter symporter superfamily M4S28_06945 IPR004090 Chemotaxis methyl-accepting receptor M4S28_06945 IPR003660 HAMP domain M4S28_06945 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M4S28_06945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_06945 IPR000727 Target SNARE coiled-coil homology domain M4S28_06950 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_06950 IPR006508 Pseudouridine synthase, RluA-like M4S28_06950 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_06950 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_06955 IPR000241 Putative RNA methylase domain M4S28_06955 IPR019614 S-adenosylmethionine-dependent methyltransferase M4S28_06955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_06955 IPR004114 THUMP domain M4S28_06955 IPR017244 Ribosomal RNA large subunit methyltransferase K/L M4S28_06960 IPR000462 CDP-alcohol phosphatidyltransferase M4S28_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_06965 IPR003593 AAA+ ATPase domain M4S28_06965 IPR003439 ABC transporter-like M4S28_06965 IPR017871 ABC transporter, conserved site M4S28_06970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_06970 IPR035906 MetI-like superfamily M4S28_06975 IPR006059 Bacterial extracellular solute-binding protein M4S28_06975 IPR027020 Protein ynjB M4S28_06985 IPR010710 Protein of unknown function DUF1289 M4S28_07005 IPR011545 DEAD/DEAH box helicase domain M4S28_07005 IPR028622 ATP-dependent RNA helicase RhlE M4S28_07005 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_07005 IPR001650 Helicase, C-terminal M4S28_07005 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07005 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_07005 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_07010 IPR004778 Homoserine/Threonine efflux protein M4S28_07010 IPR001123 Amino acid exporter protein, LeuE-type M4S28_07020 IPR000834 Peptidase M14, carboxypeptidase A M4S28_07020 IPR040626 Cytosolic carboxypeptidase, N-terminal M4S28_07040 IPR003593 AAA+ ATPase domain M4S28_07040 IPR003439 ABC transporter-like M4S28_07040 IPR017871 ABC transporter, conserved site M4S28_07040 IPR000644 CBS domain M4S28_07040 IPR005892 Glycine betaine transport ATP-binding subunit M4S28_07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_07045 IPR035906 MetI-like superfamily M4S28_07050 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain M4S28_07060 IPR005119 LysR, substrate-binding M4S28_07060 IPR000847 Transcription regulator HTH, LysR M4S28_07060 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07060 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07065 IPR007498 Intermembrane transport protein PqiA-like M4S28_07065 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M4S28_07070 IPR003399 Mce/MlaD M4S28_07095 IPR039001 Peptidoglycan-associated lipoprotein M4S28_07095 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal M4S28_07095 IPR006664 Outer membrane protein, bacterial M4S28_07095 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_07095 IPR036737 OmpA-like domain superfamily M4S28_07095 IPR006665 OmpA-like domain M4S28_07130 IPR016181 Acyl-CoA N-acyltransferase M4S28_07130 IPR000182 GNAT domain M4S28_07140 IPR023885 4Fe4S-binding SPASM domain M4S28_07140 IPR007197 Radical SAM M4S28_07140 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M4S28_07140 IPR013785 Aldolase-type TIM barrel M4S28_07145 IPR026891 Fibronectin type III-like domain M4S28_07145 IPR019800 Glycoside hydrolase, family 3, active site M4S28_07145 IPR002772 Glycoside hydrolase family 3 C-terminal domain M4S28_07145 IPR001764 Glycoside hydrolase, family 3, N-terminal M4S28_07145 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily M4S28_07145 IPR017853 Glycoside hydrolase superfamily M4S28_07145 IPR013783 Immunoglobulin-like fold M4S28_07145 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily M4S28_07150 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_07150 IPR032506 Domain of unknown function DUF4976 M4S28_07150 IPR024607 Sulfatase, conserved site M4S28_07150 IPR000917 Sulfatase, N-terminal M4S28_07170 IPR039672 Lactose permease-like M4S28_07170 IPR018043 Sodium:galactoside symporter, conserved site M4S28_07170 IPR020846 Major facilitator superfamily domain M4S28_07170 IPR036259 MFS transporter superfamily M4S28_07170 IPR001927 Sodium:galactoside symporter M4S28_07210 IPR013099 Potassium channel domain M4S28_07215 IPR003346 Transposase, IS116/IS110/IS902 M4S28_07215 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal M4S28_07310 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal M4S28_07310 IPR029751 Ribosomal protein L25 M4S28_07310 IPR020055 Ribosomal protein L25, short-form M4S28_07310 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily M4S28_07315 IPR001173 Glycosyltransferase 2-like M4S28_07315 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_07315 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 M4S28_07320 IPR032816 SNARE associated Golgi protein M4S28_07330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_07330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_07330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_07330 IPR003660 HAMP domain M4S28_07330 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_07330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_07330 IPR005467 Histidine kinase domain M4S28_07335 IPR011006 CheY-like superfamily M4S28_07335 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_07335 IPR039420 Transcriptional regulatory protein WalR-like M4S28_07335 IPR001789 Signal transduction response regulator, receiver domain M4S28_07335 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07335 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response M4S28_07345 IPR006935 Helicase/UvrB, N-terminal M4S28_07345 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_07345 IPR001650 Helicase, C-terminal M4S28_07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07345 IPR011332 Zinc-binding ribosomal protein M4S28_07350 IPR036986 RNA-binding S4 domain superfamily M4S28_07350 IPR002942 RNA-binding S4 domain M4S28_07350 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M4S28_07350 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_07350 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_07350 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M4S28_07350 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M4S28_07355 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M4S28_07355 IPR011701 Major facilitator superfamily M4S28_07355 IPR020846 Major facilitator superfamily domain M4S28_07355 IPR036259 MFS transporter superfamily M4S28_07355 IPR004734 Multidrug resistance protein M4S28_07365 IPR021295 Protein of unknown function DUF2867 M4S28_07365 IPR016040 NAD(P)-binding domain M4S28_07365 IPR036291 NAD(P)-binding domain superfamily M4S28_07370 IPR002528 Multi antimicrobial extrusion protein M4S28_07375 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07375 IPR011924 Lipoprotein releasing system, ATP-binding protein M4S28_07375 IPR003439 ABC transporter-like M4S28_07375 IPR017871 ABC transporter, conserved site M4S28_07375 IPR003593 AAA+ ATPase domain M4S28_07375 IPR015854 ABC transporter, lipoprotein release, LolD M4S28_07390 IPR023171 Na/H antiporter domain superfamily M4S28_07390 IPR004670 Na+/H+ antiporter NhaA M4S28_07410 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M4S28_07410 IPR009057 Homeobox-like domain superfamily M4S28_07410 IPR001647 DNA-binding HTH domain, TetR-type M4S28_07410 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_07410 IPR032551 HTH-type transcriptional repressor, C-terminal M4S28_07415 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M4S28_07415 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M4S28_07415 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M4S28_07415 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M4S28_07415 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M4S28_07415 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type M4S28_07415 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M4S28_07420 IPR024906 Enoyl reductase FAD binding domain M4S28_07420 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative M4S28_07420 IPR010758 Trans-2-enoyl-CoA reductase M4S28_07425 IPR006512 YidE/YbjL duplication M4S28_07425 IPR023017 Transport protein YbjL, putative M4S28_07425 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_07425 IPR006037 Regulator of K+ conductance, C-terminal M4S28_07430 IPR011902 Glutaredoxin, GrxA M4S28_07430 IPR002109 Glutaredoxin M4S28_07430 IPR014025 Glutaredoxin subgroup M4S28_07430 IPR036249 Thioredoxin-like superfamily M4S28_07435 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M4S28_07435 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M4S28_07435 IPR039697 Iron-type alcohol dehydrogenase-like M4S28_07440 IPR035472 RpiR-like, SIS domain M4S28_07440 IPR000281 Helix-turn-helix protein RpiR M4S28_07440 IPR009057 Homeobox-like domain superfamily M4S28_07440 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07440 IPR001347 Sugar isomerase (SIS) M4S28_07445 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_07445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_07445 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent M4S28_07445 IPR002129 Pyridoxal phosphate-dependent decarboxylase M4S28_07455 IPR005642 Lysine exporter LysO M4S28_07465 IPR007077 TfoX, C-terminal M4S28_07465 IPR007076 TfoX, N-terminal M4S28_07465 IPR026256 Transcriptional regulator, TfoX/Sxy-type M4S28_07475 IPR025944 Sigma-54 interaction domain, conserved site M4S28_07475 IPR003593 AAA+ ATPase domain M4S28_07475 IPR011006 CheY-like superfamily M4S28_07475 IPR009057 Homeobox-like domain superfamily M4S28_07475 IPR002197 DNA binding HTH domain, Fis-type M4S28_07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07475 IPR001789 Signal transduction response regulator, receiver domain M4S28_07475 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_07475 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_07475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_07480 IPR003660 HAMP domain M4S28_07480 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_07480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_07480 IPR000014 PAS domain M4S28_07480 IPR000700 PAS-associated, C-terminal M4S28_07480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_07480 IPR035965 PAS domain superfamily M4S28_07480 IPR013767 PAS fold M4S28_07480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_07480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_07480 IPR005467 Histidine kinase domain M4S28_07490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_07490 IPR000192 Aminotransferase class V domain M4S28_07490 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M4S28_07490 IPR022278 Phosphoserine aminotransferase M4S28_07490 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_07490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_07500 IPR005302 Molybdenum cofactor sulfurase, C-terminal M4S28_07500 IPR005163 3-alpha domain M4S28_07500 IPR011037 Pyruvate kinase-like, insert domain superfamily M4S28_07505 IPR029460 DNA polymerase, helix-hairpin-helix motif M4S28_07505 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M4S28_07505 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_07505 IPR004013 PHP domain M4S28_07505 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_07505 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type M4S28_07505 IPR012337 Ribonuclease H-like superfamily M4S28_07505 IPR036397 Ribonuclease H superfamily M4S28_07505 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M4S28_07505 IPR040982 DNA polymerase III alpha subunit finger domain M4S28_07520 IPR004839 Aminotransferase, class I/classII M4S28_07520 IPR000796 Aspartate/other aminotransferase M4S28_07520 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_07520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_07520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_07520 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site M4S28_07525 IPR003607 HD/PDEase domain M4S28_07525 IPR006674 HD domain M4S28_07525 IPR037522 HD-GYP domain M4S28_07525 IPR003660 HAMP domain M4S28_07535 IPR004839 Aminotransferase, class I/classII M4S28_07535 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_07535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_07535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_07535 IPR000524 Transcription regulator HTH, GntR M4S28_07535 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07535 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07555 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_07555 IPR012340 Nucleic acid-binding, OB-fold M4S28_07555 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M4S28_07555 IPR004522 Asparagine-tRNA ligase M4S28_07555 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M4S28_07555 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M4S28_07560 IPR036513 STAS domain superfamily M4S28_07560 IPR002645 STAS domain M4S28_07560 IPR001902 SLC26A/SulP transporter M4S28_07560 IPR011547 SLC26A/SulP transporter domain M4S28_07560 IPR018045 Sulphate anion transporter, conserved site M4S28_07565 IPR029151 Periplasmic sensor-like domain superfamily M4S28_07565 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_07565 IPR003660 HAMP domain M4S28_07565 IPR033479 Double Cache domain 1 M4S28_07570 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain M4S28_07570 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_07570 IPR037951 YdeP-like, MopB domain M4S28_07570 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_07570 IPR006656 Molybdopterin oxidoreductase M4S28_07570 IPR010046 Oxidoreductase alpha (molybdopterin) subunit M4S28_07575 IPR005119 LysR, substrate-binding M4S28_07575 IPR000847 Transcription regulator HTH, LysR M4S28_07575 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07575 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07580 IPR016193 Cytidine deaminase-like M4S28_07580 IPR003786 Sulfur carrier protein FdhD M4S28_07590 IPR018227 Amino acid/polyamine transporter 2 M4S28_07590 IPR013059 Tryptophan/tyrosine transporter M4S28_07595 IPR005131 Serine dehydratase beta chain M4S28_07595 IPR005130 Serine dehydratase-like, alpha subunit M4S28_07595 IPR029009 Allosteric substrate binding domain superfamily M4S28_07595 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form M4S28_07600 IPR018227 Amino acid/polyamine transporter 2 M4S28_07600 IPR004694 Hydroxy amino acid transporter M4S28_07605 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_07605 IPR000086 NUDIX hydrolase domain M4S28_07605 IPR000059 NUDIX hydrolase, NudL, conserved site M4S28_07605 IPR023735 Uncharacterised nudix hydrolase NudL M4S28_07615 IPR015387 LuxQ, periplasmic M4S28_07615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_07615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_07615 IPR005467 Histidine kinase domain M4S28_07615 IPR001789 Signal transduction response regulator, receiver domain M4S28_07615 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_07615 IPR011006 CheY-like superfamily M4S28_07615 IPR035965 PAS domain superfamily M4S28_07615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_07615 IPR029151 Periplasmic sensor-like domain superfamily M4S28_07615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_07620 IPR005801 ADC synthase M4S28_07620 IPR005802 Aminodeoxychorismate synthase, component I M4S28_07620 IPR019999 Anthranilate synthase component I-like M4S28_07620 IPR006805 Anthranilate synthase component I, N-terminal M4S28_07620 IPR015890 Chorismate-utilising enzyme, C-terminal M4S28_07635 IPR007413 Protein of unknown function DUF463, YcjX-like protein M4S28_07640 IPR006507 Uncharacterised protein family UPF0283 M4S28_07640 IPR021147 Protein of unknown function DUF697 M4S28_07645 IPR003593 AAA+ ATPase domain M4S28_07645 IPR002912 ACT domain M4S28_07645 IPR009057 Homeobox-like domain superfamily M4S28_07645 IPR030828 TyrR family, helix-turn-helix domain M4S28_07645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07645 IPR000014 PAS domain M4S28_07645 IPR035965 PAS domain superfamily M4S28_07645 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_07645 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_07645 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_07645 IPR025944 Sigma-54 interaction domain, conserved site M4S28_07650 IPR000182 GNAT domain M4S28_07650 IPR016181 Acyl-CoA N-acyltransferase M4S28_07665 IPR012725 Chaperone DnaK M4S28_07665 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M4S28_07665 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M4S28_07665 IPR013126 Heat shock protein 70 family M4S28_07665 IPR018181 Heat shock protein 70, conserved site M4S28_07670 IPR012725 Chaperone DnaK M4S28_07670 IPR018181 Heat shock protein 70, conserved site M4S28_07670 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily M4S28_07670 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily M4S28_07670 IPR013126 Heat shock protein 70 family M4S28_07680 IPR039435 Diguanylate cyclase DosC, globin sensor domain M4S28_07680 IPR000160 GGDEF domain M4S28_07680 IPR009050 Globin-like superfamily M4S28_07680 IPR012292 Globin/Protoglobin M4S28_07680 IPR029787 Nucleotide cyclase M4S28_07700 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_07700 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_07700 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07730 IPR007502 Helicase-associated domain M4S28_07730 IPR010222 RNA helicase HrpA M4S28_07730 IPR024590 RNA helicase HrpA, C-terminal M4S28_07730 IPR001650 Helicase, C-terminal M4S28_07730 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_07730 IPR011709 Domain of unknown function DUF1605 M4S28_07730 IPR011545 DEAD/DEAH box helicase domain M4S28_07730 IPR003593 AAA+ ATPase domain M4S28_07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_07770 IPR011006 CheY-like superfamily M4S28_07770 IPR000160 GGDEF domain M4S28_07770 IPR001789 Signal transduction response regulator, receiver domain M4S28_07770 IPR029787 Nucleotide cyclase M4S28_07775 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal M4S28_07775 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_07775 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial M4S28_07775 IPR002319 Phenylalanyl-tRNA synthetase M4S28_07775 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M4S28_07775 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit M4S28_07780 IPR012340 Nucleic acid-binding, OB-fold M4S28_07780 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily M4S28_07780 IPR005121 Ferrodoxin-fold anticodon-binding domain M4S28_07780 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit M4S28_07780 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 M4S28_07780 IPR009061 Putative DNA-binding domain superfamily M4S28_07780 IPR005146 B3/B4 tRNA-binding domain M4S28_07780 IPR002547 tRNA-binding domain M4S28_07780 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain M4S28_07780 IPR005147 tRNA synthetase, B5-domain M4S28_07780 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain M4S28_07845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_07845 IPR001423 Lysophospholipase patatin, conserved site M4S28_07845 IPR002641 Patatin-like phospholipase domain M4S28_07855 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_07855 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_07855 IPR036291 NAD(P)-binding domain superfamily M4S28_07860 IPR020602 GTP cyclohydrolase I domain M4S28_07860 IPR018234 GTP cyclohydrolase I, conserved site M4S28_07860 IPR001474 GTP cyclohydrolase I M4S28_07865 IPR006157 Dihydroneopterin aldolase/epimerase domain M4S28_07870 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M4S28_07870 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M4S28_07875 IPR007346 Endonuclease I M4S28_07890 IPR004872 Lipoprotein NlpA family M4S28_07895 IPR002925 Dienelactone hydrolase M4S28_07895 IPR029058 Alpha/Beta hydrolase fold M4S28_07925 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_07925 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_07925 IPR011008 Dimeric alpha-beta barrel M4S28_07925 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07925 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07925 IPR019888 Transcription regulator AsnC-type M4S28_07925 IPR000485 AsnC-type HTH domain M4S28_07930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_07930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_07930 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_07930 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase M4S28_07930 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M4S28_07940 IPR000620 EamA domain M4S28_07950 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07950 IPR005119 LysR, substrate-binding M4S28_07950 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07950 IPR000847 Transcription regulator HTH, LysR M4S28_07965 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit M4S28_07965 IPR029045 ClpP/crotonase-like domain superfamily M4S28_07965 IPR041010 Acetyl-coA carboxylase zinc finger domain M4S28_07965 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal M4S28_07965 IPR034733 Acetyl-CoA carboxylase M4S28_07970 IPR005119 LysR, substrate-binding M4S28_07970 IPR000847 Transcription regulator HTH, LysR M4S28_07970 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_07970 IPR036390 Winged helix DNA-binding domain superfamily M4S28_07995 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site M4S28_07995 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain M4S28_07995 IPR023186 Inosine/uridine-preferring nucleoside hydrolase M4S28_07995 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB M4S28_07995 IPR036452 Ribonucleoside hydrolase-like M4S28_08000 IPR010020 Integral membrane protein, YccS/YhfK M4S28_08000 IPR032692 Integral membrane protein YccS, N-terminal M4S28_08015 IPR011541 Nickel/cobalt transporter, high-affinity M4S28_08030 IPR011006 CheY-like superfamily M4S28_08030 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_08030 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response M4S28_08030 IPR001789 Signal transduction response regulator, receiver domain M4S28_08030 IPR039420 Transcriptional regulatory protein WalR-like M4S28_08030 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08035 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_08035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_08035 IPR005467 Histidine kinase domain M4S28_08035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_08035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_08035 IPR011649 KaiB domain M4S28_08035 IPR023527 Adaptive-response sensory-kinase SasA M4S28_08035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_08035 IPR036249 Thioredoxin-like superfamily M4S28_08050 IPR002852 Uncharacterised protein family UPF0251 M4S28_08050 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08050 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_08070 IPR006419 Nicotinamide mononucleotide transporter PnuC M4S28_08075 IPR000845 Nucleoside phosphorylase domain M4S28_08075 IPR035994 Nucleoside phosphorylase superfamily M4S28_08075 IPR018016 Nucleoside phosphorylase, conserved site M4S28_08075 IPR010058 Uridine phosphorylase M4S28_08100 IPR000119 Histone-like DNA-binding protein M4S28_08100 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_08100 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_08105 IPR000399 TPP-binding enzyme, conserved site M4S28_08105 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme M4S28_08105 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_08105 IPR012000 Thiamine pyrophosphate enzyme, central domain M4S28_08105 IPR029061 Thiamin diphosphate-binding fold M4S28_08105 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae M4S28_08105 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_08105 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_08165 IPR004090 Chemotaxis methyl-accepting receptor M4S28_08165 IPR003660 HAMP domain M4S28_08165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_08165 IPR033480 Single Cache domain 2 M4S28_08175 IPR005119 LysR, substrate-binding M4S28_08175 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08175 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08175 IPR000847 Transcription regulator HTH, LysR M4S28_08185 IPR003819 TauD/TfdA-like domain M4S28_08185 IPR042098 Taurine dioxygenase TauD-like superfamily M4S28_08190 IPR001789 Signal transduction response regulator, receiver domain M4S28_08190 IPR005467 Histidine kinase domain M4S28_08190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_08190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_08190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_08190 IPR011006 CheY-like superfamily M4S28_08190 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_08190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_08195 IPR004839 Aminotransferase, class I/classII M4S28_08195 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_08195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_08195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_08200 IPR004839 Aminotransferase, class I/classII M4S28_08200 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_08200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_08200 IPR000524 Transcription regulator HTH, GntR M4S28_08200 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08200 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08215 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal M4S28_08215 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M4S28_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08220 IPR023446 Carnitine operon protein CaiE M4S28_08220 IPR001451 Hexapeptide repeat M4S28_08220 IPR011004 Trimeric LpxA-like superfamily M4S28_08230 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_08230 IPR005684 Integration host factor, alpha subunit M4S28_08230 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_08230 IPR000119 Histone-like DNA-binding protein M4S28_08250 IPR008168 Cytochrome c, class IC M4S28_08250 IPR036909 Cytochrome c-like domain superfamily M4S28_08250 IPR009056 Cytochrome c-like domain M4S28_08260 IPR008854 TPMT family M4S28_08260 IPR025835 Thiopurine S-methyltransferase M4S28_08260 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification M4S28_08260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_08265 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase M4S28_08265 IPR016185 Pre-ATP-grasp domain superfamily M4S28_08265 IPR013815 ATP-grasp fold, subdomain 1 M4S28_08265 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M4S28_08265 IPR011761 ATP-grasp fold M4S28_08265 IPR011054 Rudiment single hybrid motif M4S28_08270 IPR006263 Cytidine deaminase, homodimeric M4S28_08270 IPR016192 APOBEC/CMP deaminase, zinc-binding M4S28_08270 IPR002125 Cytidine and deoxycytidylate deaminase domain M4S28_08270 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain M4S28_08270 IPR016193 Cytidine deaminase-like M4S28_08270 IPR020797 Cytidine deaminase, bacteria M4S28_08275 IPR005261 Conserved hypothetical protein CHP00659 M4S28_08275 IPR007300 CidB/LrgB family M4S28_08280 IPR005538 LrgA/CidA family M4S28_08280 IPR022957 Uncharacterised protein family UPF0299 M4S28_08285 IPR034747 Exonuclease I, SH3-like domain M4S28_08285 IPR038649 Exonuclease I, SH3-like domain superfamily M4S28_08285 IPR023607 Exodeoxyribonuclease I M4S28_08285 IPR034748 Exonuclease I, C-terminal alpha-helical domain M4S28_08285 IPR012337 Ribonuclease H-like superfamily M4S28_08285 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_08285 IPR013620 Exodeoxyribonuclease I, C-terminal M4S28_08285 IPR036397 Ribonuclease H superfamily M4S28_08310 IPR006694 Fatty acid hydroxylase M4S28_08330 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M4S28_08330 IPR005135 Endonuclease/exonuclease/phosphatase M4S28_08330 IPR017766 Sphingomyelinase C/phospholipase C M4S28_08335 IPR018636 Protein of unknown function DUF2058 M4S28_08355 IPR005831 Aerolysin/haemolysin toxin, conserved site M4S28_08355 IPR005830 Aerolysin M4S28_08355 IPR005138 Aerolysin/Pertussis toxin domain M4S28_08355 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily M4S28_08355 IPR016187 C-type lectin fold M4S28_08365 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08365 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08365 IPR005119 LysR, substrate-binding M4S28_08365 IPR000847 Transcription regulator HTH, LysR M4S28_08370 IPR020471 Aldo/keto reductase M4S28_08370 IPR023210 NADP-dependent oxidoreductase domain M4S28_08370 IPR036812 NADP-dependent oxidoreductase domain superfamily M4S28_08375 IPR038084 GlcG-like domain superfamily M4S28_08375 IPR005624 Haem-degrading M4S28_08380 IPR001991 Sodium:dicarboxylate symporter M4S28_08380 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_08385 IPR016040 NAD(P)-binding domain M4S28_08385 IPR036291 NAD(P)-binding domain superfamily M4S28_08385 IPR000534 Semialdehyde dehydrogenase, NAD-binding M4S28_08390 IPR012902 Prokaryotic N-terminal methylation site M4S28_08395 IPR002563 Flavin reductase like domain M4S28_08395 IPR012349 FMN-binding split barrel M4S28_08400 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal M4S28_08400 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic M4S28_08400 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like M4S28_08400 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily M4S28_08405 IPR003805 Adenosylcobinamide-GDP ribazoletransferase M4S28_08410 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase M4S28_08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08425 IPR016681 Succinylglutamate desuccinylase M4S28_08425 IPR007036 Succinylglutamate desuccinylase/aspartoacylase M4S28_08430 IPR037294 ABC transporter, BtuC-like M4S28_08430 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC M4S28_08430 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_08435 IPR003593 AAA+ ATPase domain M4S28_08435 IPR003439 ABC transporter-like M4S28_08435 IPR023693 ABC transporter, vitamin B12, BtuD M4S28_08435 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08445 IPR005119 LysR, substrate-binding M4S28_08445 IPR000847 Transcription regulator HTH, LysR M4S28_08445 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08445 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08465 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_08465 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08465 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08465 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_08465 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_08465 IPR004839 Aminotransferase, class I/classII M4S28_08465 IPR000524 Transcription regulator HTH, GntR M4S28_08470 IPR002585 Cytochrome ubiquinol oxidase subunit 1 M4S28_08475 IPR003317 Cytochrome ubiquinol oxidase subunit 2 M4S28_08495 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08495 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08495 IPR005119 LysR, substrate-binding M4S28_08495 IPR000847 Transcription regulator HTH, LysR M4S28_08520 IPR000182 GNAT domain M4S28_08520 IPR016181 Acyl-CoA N-acyltransferase M4S28_08530 IPR029787 Nucleotide cyclase M4S28_08530 IPR000160 GGDEF domain M4S28_08540 IPR036259 MFS transporter superfamily M4S28_08540 IPR020846 Major facilitator superfamily domain M4S28_08540 IPR011701 Major facilitator superfamily M4S28_08540 IPR005829 Sugar transporter, conserved site M4S28_08545 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08545 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08545 IPR005119 LysR, substrate-binding M4S28_08545 IPR000847 Transcription regulator HTH, LysR M4S28_08555 IPR002725 Protein of unknown function DUF45 M4S28_08560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_08560 IPR010286 METTL16/RlmF family M4S28_08560 IPR016909 Ribosomal RNA large subunit methyltransferase F M4S28_08565 IPR019734 Tetratricopeptide repeat M4S28_08565 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_08565 IPR013026 Tetratricopeptide repeat-containing domain M4S28_08565 IPR013360 Pilus biogenesis/stability type IV, PilW M4S28_08570 IPR005697 Homoserine O-succinyltransferase MetA M4S28_08570 IPR029062 Class I glutamine amidotransferase-like M4S28_08570 IPR033752 MetA family M4S28_08585 IPR008007 Peptidase M42 M4S28_08585 IPR011650 Peptidase M20, dimerisation domain M4S28_08585 IPR002933 Peptidase M20 M4S28_08585 IPR010162 Peptidase M20B, peptidase T-like M4S28_08585 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M4S28_08585 IPR036264 Bacterial exopeptidase dimerisation domain M4S28_08590 IPR000160 GGDEF domain M4S28_08590 IPR007894 MASE2 M4S28_08590 IPR029787 Nucleotide cyclase M4S28_08610 IPR038488 Integrase, DNA-binding domain superfamily M4S28_08610 IPR025166 Integrase, DNA-binding domain M4S28_08610 IPR010998 Integrase/recombinase, N-terminal M4S28_08610 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_08610 IPR013762 Integrase-like, catalytic domain superfamily M4S28_08610 IPR002104 Integrase, catalytic domain M4S28_08625 IPR025048 Protein of unknown function DUF3987) M4S28_08660 IPR020891 Uncharacterised protein family UPF0758, conserved site M4S28_08660 IPR025657 RadC-like JAB domain M4S28_08660 IPR001405 Uncharacterised protein family UPF0758 M4S28_08660 IPR037518 MPN domain M4S28_08695 IPR011545 DEAD/DEAH box helicase domain M4S28_08695 IPR004589 DNA helicase, ATP-dependent, RecQ type M4S28_08695 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial M4S28_08695 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_08695 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M4S28_08695 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08695 IPR018982 RQC domain M4S28_08695 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08695 IPR010997 HRDC-like superfamily M4S28_08695 IPR001650 Helicase, C-terminal M4S28_08695 IPR002121 HRDC domain M4S28_08695 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08705 IPR003607 HD/PDEase domain M4S28_08705 IPR020779 dNTP triphosphohydrolase, type 1 M4S28_08705 IPR006261 dNTP triphosphohydrolase M4S28_08705 IPR026875 Phosphohydrolase-associated domain M4S28_08705 IPR006674 HD domain M4S28_08705 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily M4S28_08725 IPR002611 IstB-like ATP-binding protein M4S28_08725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08725 IPR003593 AAA+ ATPase domain M4S28_08725 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein M4S28_08730 IPR001584 Integrase, catalytic core M4S28_08730 IPR012337 Ribonuclease H-like superfamily M4S28_08740 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08740 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08740 IPR005119 LysR, substrate-binding M4S28_08740 IPR000847 Transcription regulator HTH, LysR M4S28_08760 IPR007055 BON domain M4S28_08760 IPR001775 GspD/PilQ family M4S28_08760 IPR032789 Pilus formation protein, N-terminal M4S28_08760 IPR004846 Type II/III secretion system M4S28_08760 IPR014004 Transport-associated and nodulation domain, bacteria M4S28_08770 IPR025501 ATP binding protein MinD M4S28_08770 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08770 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M4S28_08775 IPR022399 Helicase/secretion neighbourhood ATPase M4S28_08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08775 IPR001482 Type II/IV secretion system protein M4S28_08810 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_08810 IPR007055 BON domain M4S28_08810 IPR006664 Outer membrane protein, bacterial M4S28_08810 IPR006665 OmpA-like domain M4S28_08810 IPR036737 OmpA-like domain superfamily M4S28_08815 IPR001633 EAL domain M4S28_08815 IPR013656 PAS fold-4 M4S28_08815 IPR035965 PAS domain superfamily M4S28_08815 IPR000014 PAS domain M4S28_08815 IPR000160 GGDEF domain M4S28_08815 IPR029787 Nucleotide cyclase M4S28_08815 IPR035919 EAL domain superfamily M4S28_08820 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08820 IPR001114 Adenylosuccinate synthetase M4S28_08820 IPR042111 Adenylosuccinate synthetase, domain 3 M4S28_08820 IPR042110 Adenylosuccinate synthetase, domain 2 M4S28_08820 IPR042109 Adenylosuccinate synthetase, domain 1 M4S28_08825 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08825 IPR000847 Transcription regulator HTH, LysR M4S28_08825 IPR005119 LysR, substrate-binding M4S28_08825 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_08840 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M4S28_08840 IPR003660 HAMP domain M4S28_08840 IPR004090 Chemotaxis methyl-accepting receptor M4S28_08840 IPR000727 Target SNARE coiled-coil homology domain M4S28_08855 IPR001579 Glycoside hydrolase, chitinase active site M4S28_08855 IPR001223 Glycoside hydrolase family 18, catalytic domain M4S28_08855 IPR017853 Glycoside hydrolase superfamily M4S28_08855 IPR011583 Chitinase II M4S28_08860 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain M4S28_08860 IPR005119 LysR, substrate-binding M4S28_08860 IPR036390 Winged helix DNA-binding domain superfamily M4S28_08860 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_08860 IPR000847 Transcription regulator HTH, LysR M4S28_08865 IPR012910 TonB-dependent receptor, plug domain M4S28_08865 IPR039426 Vitamin B12 transporter BtuB-like M4S28_08865 IPR010917 TonB-dependent receptor, conserved site M4S28_08865 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_08865 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_08865 IPR010916 TonB box, conserved site M4S28_08865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_08870 IPR041698 Methyltransferase domain 25 M4S28_08870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_08875 IPR013656 PAS fold-4 M4S28_08875 IPR000160 GGDEF domain M4S28_08875 IPR029787 Nucleotide cyclase M4S28_08875 IPR000014 PAS domain M4S28_08875 IPR000700 PAS-associated, C-terminal M4S28_08875 IPR035965 PAS domain superfamily M4S28_08880 IPR016181 Acyl-CoA N-acyltransferase M4S28_08880 IPR000182 GNAT domain M4S28_08885 IPR000209 Peptidase S8/S53 domain M4S28_08885 IPR034084 Thermitase-like, domain M4S28_08885 IPR023828 Peptidase S8, subtilisin, Ser-active site M4S28_08885 IPR036852 Peptidase S8/S53 domain superfamily M4S28_08885 IPR023827 Peptidase S8, subtilisin, Asp-active site M4S28_08885 IPR022398 Peptidase S8, subtilisin, His-active site M4S28_08885 IPR015500 Peptidase S8, subtilisin-related M4S28_08895 IPR001123 Amino acid exporter protein, LeuE-type M4S28_08895 IPR004777 L-lysine exporter/arginine exporter M4S28_08910 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain M4S28_08910 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_08910 IPR004593 Nuclease SbcCD subunit D M4S28_08910 IPR029052 Metallo-dependent phosphatase-like M4S28_08910 IPR026843 Nuclease SbcCD subunit D, C-terminal domain M4S28_08915 IPR038729 Rad50/SbcC-type AAA domain M4S28_08915 IPR004592 Nuclease SbcC, gammaproteobacteria type M4S28_08915 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_08935 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M4S28_08935 IPR007357 Deoxyribodipyrimidine photolyase-related protein M4S28_08935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_08940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_08940 IPR014133 Cryptochrome DASH M4S28_08940 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M4S28_08940 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily M4S28_08940 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain M4S28_08940 IPR002081 Cryptochrome/DNA photolyase class 1 M4S28_08940 IPR006050 DNA photolyase, N-terminal M4S28_08945 IPR006016 UspA M4S28_08945 IPR006015 Universal stress protein A family M4S28_08945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_08975 IPR020846 Major facilitator superfamily domain M4S28_08975 IPR021159 Glycerate/sugar phosphate transporter, conserved site M4S28_08975 IPR011701 Major facilitator superfamily M4S28_08975 IPR000849 Sugar phosphate transporter M4S28_08975 IPR036259 MFS transporter superfamily M4S28_08975 IPR005267 Glycerol-3-phosphate transporter M4S28_08980 IPR030395 Glycerophosphodiester phosphodiesterase domain M4S28_08980 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily M4S28_08990 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M4S28_08990 IPR002912 ACT domain M4S28_08990 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M4S28_08990 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M4S28_08990 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M4S28_08990 IPR036291 NAD(P)-binding domain superfamily M4S28_09010 IPR000086 NUDIX hydrolase domain M4S28_09010 IPR020084 NUDIX hydrolase, conserved site M4S28_09010 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_09010 IPR020476 NUDIX hydrolase M4S28_09025 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M4S28_09025 IPR002942 RNA-binding S4 domain M4S28_09025 IPR036986 RNA-binding S4 domain superfamily M4S28_09025 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_09025 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M4S28_09025 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M4S28_09025 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_09035 IPR001451 Hexapeptide repeat M4S28_09035 IPR018357 Hexapeptide transferase, conserved site M4S28_09035 IPR039369 Galactoside O-acetyltransferase LacA-like M4S28_09035 IPR024688 Maltose/galactoside acetyltransferase M4S28_09035 IPR011004 Trimeric LpxA-like superfamily M4S28_09085 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M4S28_09085 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase M4S28_09085 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M4S28_09110 IPR020476 NUDIX hydrolase M4S28_09110 IPR000086 NUDIX hydrolase domain M4S28_09110 IPR020084 NUDIX hydrolase, conserved site M4S28_09110 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_09155 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_09155 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_09155 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_09185 IPR029062 Class I glutamine amidotransferase-like M4S28_09185 IPR003507 Peptidase family S66 M4S28_09185 IPR040921 LD-carboxypeptidase, C-terminal M4S28_09185 IPR040449 LD-carboxypeptidase, N-terminal M4S28_09185 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal M4S28_09185 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M4S28_09205 IPR011130 SecA, preprotein cross-linking domain M4S28_09205 IPR011116 SecA Wing/Scaffold M4S28_09205 IPR000185 Protein translocase subunit SecA M4S28_09205 IPR014018 SecA motor DEAD M4S28_09205 IPR036670 SecA, preprotein cross-linking domain superfamily M4S28_09205 IPR011115 SecA DEAD-like, N-terminal M4S28_09205 IPR020937 SecA conserved site M4S28_09205 IPR004027 SEC-C motif M4S28_09205 IPR036266 SecA, Wing/Scaffold superfamily M4S28_09205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09210 IPR036412 HAD-like superfamily M4S28_09210 IPR006439 HAD hydrolase, subfamily IA M4S28_09210 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_09210 IPR023214 HAD superfamily M4S28_09210 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_09220 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_09220 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_09220 IPR036291 NAD(P)-binding domain superfamily M4S28_09225 IPR011004 Trimeric LpxA-like superfamily M4S28_09225 IPR018357 Hexapeptide transferase, conserved site M4S28_09225 IPR001451 Hexapeptide repeat M4S28_09255 IPR004445 Sodium/glutamate symport carrier protein GltS M4S28_09270 IPR001539 Peptidase U32 M4S28_09270 IPR020988 Peptidase U32, collagenase M4S28_09280 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_09280 IPR011527 ABC transporter type 1, transmembrane domain M4S28_09280 IPR003593 AAA+ ATPase domain M4S28_09280 IPR017871 ABC transporter, conserved site M4S28_09280 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09280 IPR003439 ABC transporter-like M4S28_09285 IPR003593 AAA+ ATPase domain M4S28_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09285 IPR017871 ABC transporter, conserved site M4S28_09285 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M4S28_09285 IPR003439 ABC transporter-like M4S28_09290 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_09290 IPR001320 Ionotropic glutamate receptor M4S28_09290 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M4S28_09290 IPR018313 Solute-binding protein family 3, conserved site M4S28_09295 IPR035906 MetI-like superfamily M4S28_09295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_09300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_09300 IPR035906 MetI-like superfamily M4S28_09300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09305 IPR004107 Integrase, SAM-like, N-terminal M4S28_09305 IPR013762 Integrase-like, catalytic domain superfamily M4S28_09305 IPR002104 Integrase, catalytic domain M4S28_09305 IPR011946 Integrase, integron-type M4S28_09305 IPR010998 Integrase/recombinase, N-terminal M4S28_09305 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_09310 IPR026889 Transposase zinc-binding domain M4S28_09310 IPR007069 Transposase, IS801/IS1294 M4S28_09375 IPR023000 Shikimate kinase, conserved site M4S28_09375 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09375 IPR031322 Shikimate kinase/gluconokinase M4S28_09375 IPR000623 Shikimate kinase/Threonine synthase-like 1 M4S28_09410 IPR003423 Outer membrane efflux protein M4S28_09410 IPR010131 RND efflux system, outer membrane lipoprotein, NodT M4S28_09415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_09415 IPR001036 Acriflavin resistance protein M4S28_09415 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA M4S28_09425 IPR036390 Winged helix DNA-binding domain superfamily M4S28_09425 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_09425 IPR000847 Transcription regulator HTH, LysR M4S28_09425 IPR005119 LysR, substrate-binding M4S28_09430 IPR003362 Bacterial sugar transferase M4S28_09430 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase M4S28_09440 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M4S28_09440 IPR001296 Glycosyl transferase, family 1 M4S28_09465 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain M4S28_09465 IPR001296 Glycosyl transferase, family 1 M4S28_09465 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL M4S28_09470 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_09470 IPR001789 Signal transduction response regulator, receiver domain M4S28_09470 IPR025944 Sigma-54 interaction domain, conserved site M4S28_09470 IPR003593 AAA+ ATPase domain M4S28_09470 IPR011006 CheY-like superfamily M4S28_09470 IPR009057 Homeobox-like domain superfamily M4S28_09470 IPR002197 DNA binding HTH domain, Fis-type M4S28_09470 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09470 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_09480 IPR000644 CBS domain M4S28_09480 IPR017871 ABC transporter, conserved site M4S28_09480 IPR003439 ABC transporter-like M4S28_09480 IPR003593 AAA+ ATPase domain M4S28_09480 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09480 IPR005892 Glycine betaine transport ATP-binding subunit M4S28_09485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09485 IPR035906 MetI-like superfamily M4S28_09495 IPR001789 Signal transduction response regulator, receiver domain M4S28_09495 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_09495 IPR036641 HPT domain superfamily M4S28_09495 IPR011006 CheY-like superfamily M4S28_09495 IPR019247 Histidine kinase BarA, N-terminal M4S28_09495 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_09495 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_09495 IPR005467 Histidine kinase domain M4S28_09495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_09495 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_09495 IPR003660 HAMP domain M4S28_09495 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_09515 IPR006664 Outer membrane protein, bacterial M4S28_09515 IPR006665 OmpA-like domain M4S28_09515 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_09515 IPR039001 Peptidoglycan-associated lipoprotein M4S28_09515 IPR036737 OmpA-like domain superfamily M4S28_09525 IPR012310 DNA ligase, ATP-dependent, central M4S28_09525 IPR016059 DNA ligase, ATP-dependent, conserved site M4S28_09525 IPR029319 DNA ligase, OB-like domain M4S28_09525 IPR012340 Nucleic acid-binding, OB-fold M4S28_09530 IPR002528 Multi antimicrobial extrusion protein M4S28_09535 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M4S28_09535 IPR001783 Lumazine-binding protein M4S28_09535 IPR026017 Lumazine-binding domain M4S28_09535 IPR017938 Riboflavin synthase-like beta-barrel M4S28_09545 IPR016477 Fructosamine/Ketosamine-3-kinase M4S28_09545 IPR011009 Protein kinase-like domain superfamily M4S28_09555 IPR000064 Endopeptidase, NLPC/P60 domain M4S28_09555 IPR038765 Papain-like cysteine peptidase superfamily M4S28_09560 IPR033479 Double Cache domain 1 M4S28_09560 IPR004090 Chemotaxis methyl-accepting receptor M4S28_09560 IPR003660 HAMP domain M4S28_09560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_09560 IPR029151 Periplasmic sensor-like domain superfamily M4S28_09560 IPR000727 Target SNARE coiled-coil homology domain M4S28_09570 IPR005636 DTW M4S28_09570 IPR039262 DTW domain-containing protein 2 M4S28_09575 IPR000600 ROK family M4S28_09575 IPR023505 N-acetyl-D-glucosamine kinase M4S28_09585 IPR036135 MoeA, N-terminal and linker domain superfamily M4S28_09585 IPR005110 MoeA, N-terminal and linker domain M4S28_09585 IPR036688 MoeA, C-terminal, domain IV superfamily M4S28_09585 IPR036425 MoaB/Mog-like domain superfamily M4S28_09585 IPR001453 MoaB/Mog domain M4S28_09585 IPR008284 Molybdenum cofactor biosynthesis, conserved site M4S28_09585 IPR038987 Molybdopterin biosynthesis protein MoeA-like M4S28_09585 IPR005111 MoeA, C-terminal, domain IV M4S28_09590 IPR025877 MobA-like NTP transferase M4S28_09590 IPR013482 Molybdenum cofactor guanylyltransferase M4S28_09590 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09595 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_09595 IPR013611 Transport-associated OB, type 2 M4S28_09595 IPR003439 ABC transporter-like M4S28_09595 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M4S28_09595 IPR017871 ABC transporter, conserved site M4S28_09595 IPR003593 AAA+ ATPase domain M4S28_09600 IPR035906 MetI-like superfamily M4S28_09600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09605 IPR024370 PBP domain M4S28_09610 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_09610 IPR011006 CheY-like superfamily M4S28_09610 IPR009057 Homeobox-like domain superfamily M4S28_09610 IPR002197 DNA binding HTH domain, Fis-type M4S28_09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09610 IPR001789 Signal transduction response regulator, receiver domain M4S28_09610 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_09610 IPR003593 AAA+ ATPase domain M4S28_09610 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_09610 IPR025944 Sigma-54 interaction domain, conserved site M4S28_09615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_09615 IPR005467 Histidine kinase domain M4S28_09615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_09615 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_09615 IPR029151 Periplasmic sensor-like domain superfamily M4S28_09615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_09615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_09620 IPR033480 Single Cache domain 2 M4S28_09620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_09620 IPR004090 Chemotaxis methyl-accepting receptor M4S28_09620 IPR003660 HAMP domain M4S28_09635 IPR003439 ABC transporter-like M4S28_09635 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09635 IPR003593 AAA+ ATPase domain M4S28_09635 IPR032781 ABC-transporter extension domain M4S28_09640 IPR003660 HAMP domain M4S28_09640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_09645 IPR016193 Cytidine deaminase-like M4S28_09645 IPR003786 Sulfur carrier protein FdhD M4S28_09665 IPR036411 TorD-like superfamily M4S28_09665 IPR023069 Chaperone TorD M4S28_09665 IPR020945 DMSO/Nitrate reductase chaperone M4S28_09665 IPR036386 HscB, C-terminal domain superfamily M4S28_09675 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_09675 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M4S28_09675 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_09675 IPR006656 Molybdopterin oxidoreductase M4S28_09675 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site M4S28_09675 IPR006443 Formate dehydrogenase-N, alpha subunit M4S28_09675 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_09675 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_09680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_09680 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_09680 IPR000813 7Fe ferredoxin M4S28_09695 IPR018047 Ammonium transporter, conserved site M4S28_09695 IPR024041 Ammonium transporter AmtB-like domain M4S28_09695 IPR001905 Ammonium transporter M4S28_09695 IPR029020 Ammonium/urea transporter M4S28_09700 IPR003000 Sirtuin family M4S28_09700 IPR026590 Sirtuin family, catalytic core domain M4S28_09700 IPR027546 Sirtuin, class III M4S28_09700 IPR026591 Sirtuin, catalytic core small domain superfamily M4S28_09700 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_09710 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M4S28_09710 IPR006059 Bacterial extracellular solute-binding protein M4S28_09715 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein M4S28_09715 IPR006059 Bacterial extracellular solute-binding protein M4S28_09720 IPR035906 MetI-like superfamily M4S28_09720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09725 IPR035906 MetI-like superfamily M4S28_09725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_09730 IPR013611 Transport-associated OB, type 2 M4S28_09730 IPR003593 AAA+ ATPase domain M4S28_09730 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_09730 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M4S28_09730 IPR003439 ABC transporter-like M4S28_09730 IPR017871 ABC transporter, conserved site M4S28_09730 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M4S28_09730 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_09750 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal M4S28_09750 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase M4S28_09750 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type M4S28_09750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_09755 IPR006016 UspA M4S28_09760 IPR014710 RmlC-like jelly roll fold M4S28_09760 IPR018335 Transcription regulator HTH, Crp-type, conserved site M4S28_09760 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_09760 IPR036390 Winged helix DNA-binding domain superfamily M4S28_09760 IPR018490 Cyclic nucleotide-binding-like M4S28_09760 IPR012318 Crp-type HTH domain M4S28_09760 IPR000595 Cyclic nucleotide-binding domain M4S28_09775 IPR006121 Heavy metal-associated domain, HMA M4S28_09775 IPR023299 P-type ATPase, cytoplasmic domain N M4S28_09775 IPR018303 P-type ATPase, phosphorylation site M4S28_09775 IPR023298 P-type ATPase, transmembrane domain superfamily M4S28_09775 IPR036163 Heavy metal-associated domain superfamily M4S28_09775 IPR036412 HAD-like superfamily M4S28_09775 IPR008250 P-type ATPase, A domain superfamily M4S28_09775 IPR001757 P-type ATPase M4S28_09775 IPR017969 Heavy-metal-associated, conserved site M4S28_09775 IPR027256 P-type ATPase, subfamily IB M4S28_09775 IPR023214 HAD superfamily M4S28_09785 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily M4S28_09785 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal M4S28_09785 IPR036909 Cytochrome c-like domain superfamily M4S28_09785 IPR008168 Cytochrome c, class IC M4S28_09785 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M4S28_09785 IPR009056 Cytochrome c-like domain M4S28_09800 IPR000883 Cytochrome c oxidase subunit I M4S28_09800 IPR036927 Cytochrome c oxidase-like, subunit I superfamily M4S28_09800 IPR004677 Cytochrome c oxidase cbb3-type, subunit I M4S28_09800 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site M4S28_09800 IPR023616 Cytochrome c oxidase-like, subunit I domain M4S28_09815 IPR005467 Histidine kinase domain M4S28_09815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_09815 IPR001789 Signal transduction response regulator, receiver domain M4S28_09815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_09815 IPR029151 Periplasmic sensor-like domain superfamily M4S28_09815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_09815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_09815 IPR011006 CheY-like superfamily M4S28_09815 IPR015387 LuxQ, periplasmic M4S28_09815 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_09835 IPR008900 Zona occludens toxin, N-terminal M4S28_09895 IPR008900 Zona occludens toxin, N-terminal M4S28_09955 IPR008900 Zona occludens toxin, N-terminal M4S28_10015 IPR008900 Zona occludens toxin, N-terminal M4S28_10145 IPR013321 Arc-type ribbon-helix-helix M4S28_10145 IPR009390 Macrodomain Ter protein, MatP M4S28_10145 IPR035375 MatP, C-terminal ribbon-helix-helix domain M4S28_10145 IPR035087 MatP, N-terminal M4S28_10145 IPR038339 MatP, N-terminal domain superfamily M4S28_10150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_10150 IPR008269 Peptidase S16, Lon proteolytic domain M4S28_10150 IPR027065 Lon protease M4S28_10150 IPR041699 Lon protease, AAA domain M4S28_10150 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_10155 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA M4S28_10155 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ M4S28_10155 IPR029069 HotDog domain superfamily M4S28_10160 IPR007040 Ribosome modulation factor M4S28_10160 IPR023200 Ribosome modulation factor domain superfamily M4S28_10170 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M4S28_10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_10170 IPR017871 ABC transporter, conserved site M4S28_10170 IPR003439 ABC transporter-like M4S28_10170 IPR003593 AAA+ ATPase domain M4S28_10170 IPR032524 ABC transporter Uup, C-terminal M4S28_10170 IPR032781 ABC-transporter extension domain M4S28_10180 IPR019614 S-adenosylmethionine-dependent methyltransferase M4S28_10180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_10180 IPR017244 Ribosomal RNA large subunit methyltransferase K/L M4S28_10180 IPR004114 THUMP domain M4S28_10180 IPR000241 Putative RNA methylase domain M4S28_10180 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_10185 IPR009809 Cell division protein ZapC M4S28_10190 IPR001295 Dihydroorotate dehydrogenase, conserved site M4S28_10190 IPR005719 Dihydroorotate dehydrogenase, class 2 M4S28_10190 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 M4S28_10190 IPR013785 Aldolase-type TIM barrel M4S28_10190 IPR005720 Dihydroorotate dehydrogenase domain M4S28_10195 IPR007780 NAD-glutamate dehydrogenase, bacteria M4S28_10195 IPR028971 NAD-glutamate dehydrogenase M4S28_10195 IPR036291 NAD(P)-binding domain superfamily M4S28_10205 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold M4S28_10205 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily M4S28_10205 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase M4S28_10205 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal M4S28_10205 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily M4S28_10205 IPR042097 Aminopeptidase N-like , N-terminal M4S28_10205 IPR012779 Peptidase M1, alanyl aminopeptidase M4S28_10205 IPR014782 Peptidase M1, membrane alanine aminopeptidase M4S28_10205 IPR027268 Peptidase M4/M1, CTD superfamily M4S28_10215 IPR005151 Tail specific protease M4S28_10215 IPR004447 C-terminal-processing peptidase S41A M4S28_10215 IPR036034 PDZ superfamily M4S28_10215 IPR001478 PDZ domain M4S28_10215 IPR029045 ClpP/crotonase-like domain superfamily M4S28_10215 IPR040573 Tail specific protease, N-terminal domain M4S28_10215 IPR020992 Tail specific protease, C-terminal M4S28_10220 IPR023529 RNA chaperone ProQ M4S28_10220 IPR016103 ProQ/FinO domain M4S28_10220 IPR036442 ProQ/FinO domain superfamily M4S28_10220 IPR035236 RNA chaperone ProQ, C-terminal M4S28_10225 IPR029016 GAF-like domain superfamily M4S28_10225 IPR003018 GAF domain M4S28_10225 IPR000614 Free Met sulfoxide reductase conserved site M4S28_10230 IPR011917 ABC transporter, lipid A export, MsbA M4S28_10230 IPR039421 Type I protein exporter M4S28_10230 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_10230 IPR017871 ABC transporter, conserved site M4S28_10230 IPR003439 ABC transporter-like M4S28_10230 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_10230 IPR011527 ABC transporter type 1, transmembrane domain M4S28_10230 IPR003593 AAA+ ATPase domain M4S28_10235 IPR007498 Intermembrane transport protein PqiA-like M4S28_10235 IPR011031 Multihaem cytochrome M4S28_10235 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M4S28_10240 IPR003399 Mce/MlaD M4S28_10245 IPR011023 Nop2p M4S28_10245 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site M4S28_10245 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal M4S28_10245 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type M4S28_10245 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain M4S28_10245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_10245 IPR023545 rRNA small subunit methyltransferase F M4S28_10245 IPR023267 RNA (C5-cytosine) methyltransferase M4S28_10250 IPR012340 Nucleic acid-binding, OB-fold M4S28_10250 IPR039566 Conserved virulence factor B, S1 domain M4S28_10250 IPR003029 S1 domain M4S28_10250 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_10250 IPR014464 Conserved virulence factor B M4S28_10250 IPR040764 Conserved virulence factor B-like, winged helix domain M4S28_10250 IPR022967 RNA-binding domain, S1 M4S28_10265 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding M4S28_10265 IPR040442 Pyruvate kinase-like domain superfamily M4S28_10265 IPR013815 ATP-grasp fold, subdomain 1 M4S28_10265 IPR008279 PEP-utilising enzyme, mobile domain M4S28_10265 IPR006319 Phosphoenolpyruvate synthase M4S28_10265 IPR018274 PEP-utilising enzyme, active site M4S28_10265 IPR000121 PEP-utilising enzyme, C-terminal M4S28_10265 IPR023151 PEP-utilising enzyme, conserved site M4S28_10265 IPR036637 Phosphohistidine domain superfamily M4S28_10265 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_10270 IPR006219 DHAP synthase, class 1 M4S28_10270 IPR006218 DAHP synthetase I/KDSA M4S28_10270 IPR013785 Aldolase-type TIM barrel M4S28_10275 IPR035570 UPF0234, N-terminal M4S28_10275 IPR007551 Protein of unknown function DUF520 M4S28_10275 IPR035571 UPF0234-like, C-terminal M4S28_10275 IPR036183 YajQ-like superfamily M4S28_10280 IPR012409 Sirohaem synthase M4S28_10280 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site M4S28_10280 IPR006367 Sirohaem synthase, N-terminal M4S28_10280 IPR028281 Siroheme synthase, central domain M4S28_10280 IPR019478 Sirohaem synthase, dimerisation domain M4S28_10280 IPR035996 Tetrapyrrole methylase superfamily M4S28_10280 IPR014777 Tetrapyrrole methylase, subdomain 1 M4S28_10280 IPR014776 Tetrapyrrole methylase, subdomain 2 M4S28_10280 IPR006366 Uroporphyrin-III C-methyltransferase M4S28_10280 IPR036291 NAD(P)-binding domain superfamily M4S28_10280 IPR037115 Sirohaem synthase, dimerisation domain superfamily M4S28_10280 IPR000878 Tetrapyrrole methylase M4S28_10285 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M4S28_10285 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_10285 IPR018313 Solute-binding protein family 3, conserved site M4S28_10290 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_10290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_10290 IPR035906 MetI-like superfamily M4S28_10295 IPR035906 MetI-like superfamily M4S28_10295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_10295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_10300 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M4S28_10300 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_10300 IPR017871 ABC transporter, conserved site M4S28_10300 IPR003439 ABC transporter-like M4S28_10300 IPR003593 AAA+ ATPase domain M4S28_10305 IPR006214 Bax inhibitor 1-related M4S28_10305 IPR006213 Bax inhibitor 1, conserved site M4S28_10310 IPR007453 Sulphur transfer protein DsrC/TusE M4S28_10310 IPR025526 DsrC-like domain superfamily M4S28_10310 IPR042072 DsrC-like protein, C-terminal domain M4S28_10315 IPR036046 Acylphosphatase-like domain superfamily M4S28_10315 IPR017968 Acylphosphatase, conserved site M4S28_10315 IPR001792 Acylphosphatase-like domain M4S28_10315 IPR020456 Acylphosphatase M4S28_10320 IPR004090 Chemotaxis methyl-accepting receptor M4S28_10320 IPR000727 Target SNARE coiled-coil homology domain M4S28_10320 IPR003660 HAMP domain M4S28_10320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_10320 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M4S28_10325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_10325 IPR019614 S-adenosylmethionine-dependent methyltransferase M4S28_10325 IPR023542 rRNA large subunit methyltransferase I M4S28_10325 IPR036974 PUA domain superfamily M4S28_10325 IPR015947 PUA-like superfamily M4S28_10325 IPR002478 PUA domain M4S28_10325 IPR041532 RlmI, PUA-like domain M4S28_10345 IPR039567 Glycine zipper domain M4S28_10345 IPR006664 Outer membrane protein, bacterial M4S28_10345 IPR006665 OmpA-like domain M4S28_10345 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_10345 IPR036737 OmpA-like domain superfamily M4S28_10355 IPR000160 GGDEF domain M4S28_10355 IPR029787 Nucleotide cyclase M4S28_10355 IPR033416 Periplasmic sensor domain CHASE7 M4S28_10360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_10360 IPR018317 Queuosine biosynthesis protein QueC M4S28_10365 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria M4S28_10365 IPR013785 Aldolase-type TIM barrel M4S28_10365 IPR024924 7-carboxy-7-deazaguanine synthase-like M4S28_10365 IPR007197 Radical SAM M4S28_10370 IPR023214 HAD superfamily M4S28_10370 IPR006379 HAD-superfamily hydrolase, subfamily IIB M4S28_10370 IPR036412 HAD-like superfamily M4S28_10370 IPR000150 Cof family M4S28_10395 IPR000873 AMP-dependent synthetase/ligase M4S28_10395 IPR042099 AMP-dependent synthetase-like superfamily M4S28_10395 IPR020845 AMP-binding, conserved site M4S28_10395 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_10395 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain M4S28_10400 IPR012709 2-methyl-aconitate isomerase PrpF M4S28_10400 IPR007400 PrpF protein M4S28_10405 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain M4S28_10405 IPR036008 Aconitase, iron-sulfur domain M4S28_10405 IPR006249 Aconitase/Iron-responsive element-binding protein 2 M4S28_10405 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel M4S28_10405 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain M4S28_10405 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent M4S28_10405 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 M4S28_10410 IPR016143 Citrate synthase-like, small alpha subdomain M4S28_10410 IPR002020 Citrate synthase M4S28_10410 IPR019810 Citrate synthase active site M4S28_10410 IPR016142 Citrate synthase-like, large alpha subdomain M4S28_10410 IPR024176 Citrate synthase, bacterial-type M4S28_10410 IPR011278 2-methylcitrate synthase/citrate synthase type I M4S28_10410 IPR036969 Citrate synthase superfamily M4S28_10415 IPR012695 2-methylisocitrate lyase M4S28_10415 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_10415 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site M4S28_10415 IPR040442 Pyruvate kinase-like domain superfamily M4S28_10415 IPR039556 ICL/PEPM domain M4S28_10425 IPR036259 MFS transporter superfamily M4S28_10425 IPR005829 Sugar transporter, conserved site M4S28_10425 IPR011701 Major facilitator superfamily M4S28_10425 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M4S28_10425 IPR020846 Major facilitator superfamily domain M4S28_10435 IPR003607 HD/PDEase domain M4S28_10435 IPR037522 HD-GYP domain M4S28_10440 IPR037026 Vgr protein, OB-fold domain superfamily M4S28_10440 IPR006531 Gp5 N-terminal M4S28_10440 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M4S28_10440 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M4S28_10440 IPR010609 Gp5, C-terminal M4S28_10470 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M4S28_10495 IPR003593 AAA+ ATPase domain M4S28_10495 IPR003959 ATPase, AAA-type, core M4S28_10495 IPR004176 Clp, N-terminal M4S28_10495 IPR019489 Clp ATPase, C-terminal M4S28_10495 IPR036628 Clp, N-terminal domain superfamily M4S28_10495 IPR001270 ClpA/B family M4S28_10495 IPR017729 Type VI secretion system, ATPase ClpV1 M4S28_10495 IPR018368 ClpA/B, conserved site 1 M4S28_10495 IPR041546 ClpA/ClpB, AAA lid domain M4S28_10495 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_10525 IPR010263 Type VI secretion protein, VC_A0114 M4S28_10540 IPR017441 Protein kinase, ATP binding site M4S28_10540 IPR000719 Protein kinase domain M4S28_10540 IPR008271 Serine/threonine-protein kinase, active site M4S28_10540 IPR011009 Protein kinase-like domain superfamily M4S28_10540 IPR005543 PASTA domain M4S28_10550 IPR011006 CheY-like superfamily M4S28_10550 IPR003607 HD/PDEase domain M4S28_10550 IPR037522 HD-GYP domain M4S28_10550 IPR001789 Signal transduction response regulator, receiver domain M4S28_10555 IPR019247 Histidine kinase BarA, N-terminal M4S28_10555 IPR036641 HPT domain superfamily M4S28_10555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_10555 IPR011006 CheY-like superfamily M4S28_10555 IPR003660 HAMP domain M4S28_10555 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_10555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_10555 IPR005467 Histidine kinase domain M4S28_10555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_10555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_10555 IPR001789 Signal transduction response regulator, receiver domain M4S28_10555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_10570 IPR002823 Protein of unknown function DUF112, transmembrane M4S28_10585 IPR018668 DNA-binding protein VF530-like M4S28_10585 IPR036361 SAP domain superfamily M4S28_10590 IPR003607 HD/PDEase domain M4S28_10590 IPR037522 HD-GYP domain M4S28_10590 IPR011006 CheY-like superfamily M4S28_10590 IPR001789 Signal transduction response regulator, receiver domain M4S28_10595 IPR006183 6-phosphogluconate dehydrogenase M4S28_10595 IPR036291 NAD(P)-binding domain superfamily M4S28_10595 IPR006184 6-phosphogluconate-binding site M4S28_10595 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating M4S28_10595 IPR006114 6-phosphogluconate dehydrogenase, C-terminal M4S28_10595 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_10595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_10595 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M4S28_10600 IPR005900 6-phosphogluconolactonase, DevB-type M4S28_10600 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase M4S28_10600 IPR037171 NagB/RpiA transferase-like M4S28_10600 IPR039104 6-Phosphogluconolactonase M4S28_10605 IPR036291 NAD(P)-binding domain superfamily M4S28_10605 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding M4S28_10605 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal M4S28_10605 IPR001282 Glucose-6-phosphate dehydrogenase M4S28_10605 IPR019796 Glucose-6-phosphate dehydrogenase, active site M4S28_10610 IPR011006 CheY-like superfamily M4S28_10610 IPR024187 Signal transduction response regulator, citrate/malate metabolism M4S28_10610 IPR001789 Signal transduction response regulator, receiver domain M4S28_10610 IPR028141 Transcriptional regulator M4S28_10615 IPR039506 SpoOB, alpha-helical domain M4S28_10615 IPR029151 Periplasmic sensor-like domain superfamily M4S28_10615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_10615 IPR033463 Single cache domain 3 M4S28_10615 IPR013767 PAS fold M4S28_10615 IPR000014 PAS domain M4S28_10615 IPR005467 Histidine kinase domain M4S28_10615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_10615 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_10615 IPR035965 PAS domain superfamily M4S28_10615 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB M4S28_10630 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_10645 IPR001463 Sodium:alanine symporter M4S28_10665 IPR001463 Sodium:alanine symporter M4S28_10680 IPR005830 Aerolysin M4S28_10680 IPR005138 Aerolysin/Pertussis toxin domain M4S28_10680 IPR037015 Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily M4S28_10680 IPR005831 Aerolysin/haemolysin toxin, conserved site M4S28_10680 IPR016187 C-type lectin fold M4S28_10685 IPR004778 Homoserine/Threonine efflux protein M4S28_10685 IPR001123 Amino acid exporter protein, LeuE-type M4S28_10690 IPR001333 Peptidase M32, carboxypeptidase Taq M4S28_10720 IPR002781 Transmembrane protein TauE-like M4S28_10730 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal M4S28_10730 IPR006276 Cobalamin-independent methionine synthase M4S28_10730 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal M4S28_10730 IPR038071 UROD/MetE-like superfamily M4S28_10750 IPR008173 Adenylyl cyclase CyaB M4S28_10750 IPR033469 CYTH-like domain superfamily M4S28_10750 IPR023577 CYTH domain M4S28_10765 IPR016181 Acyl-CoA N-acyltransferase M4S28_10765 IPR000182 GNAT domain M4S28_10785 IPR025944 Sigma-54 interaction domain, conserved site M4S28_10785 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_10785 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_10785 IPR001789 Signal transduction response regulator, receiver domain M4S28_10785 IPR009057 Homeobox-like domain superfamily M4S28_10785 IPR002197 DNA binding HTH domain, Fis-type M4S28_10785 IPR011006 CheY-like superfamily M4S28_10790 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_10790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_10790 IPR005467 Histidine kinase domain M4S28_10790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_10790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_10790 IPR000014 PAS domain M4S28_10790 IPR035965 PAS domain superfamily M4S28_10790 IPR013767 PAS fold M4S28_10790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_10795 IPR031312 Sodium/sulphate symporter, conserved site M4S28_10795 IPR001898 Solute carrier family 13 M4S28_10825 IPR013856 Peptidase M4 domain M4S28_10825 IPR001570 Peptidase M4, C-terminal M4S28_10825 IPR027268 Peptidase M4/M1, CTD superfamily M4S28_10825 IPR023612 Peptidase M4 M4S28_10825 IPR011096 FTP domain M4S28_10825 IPR025711 PepSY domain M4S28_10825 IPR007280 Peptidase, C-terminal, archaeal/bacterial M4S28_10845 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_10845 IPR000847 Transcription regulator HTH, LysR M4S28_10845 IPR036390 Winged helix DNA-binding domain superfamily M4S28_10845 IPR005119 LysR, substrate-binding M4S28_10850 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase M4S28_10850 IPR011166 Beta-eliminating lyase family M4S28_10850 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_10850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_10850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_10850 IPR013440 Tryptophanase M4S28_10850 IPR018176 Tryptophanase, conserved site M4S28_10865 IPR011057 Mss4-like superfamily M4S28_10865 IPR002579 Peptide methionine sulphoxide reductase MrsB M4S28_10865 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M4S28_10865 IPR028427 Peptide methionine sulfoxide reductase M4S28_10865 IPR002569 Peptide methionine sulphoxide reductase MsrA M4S28_10875 IPR038377 Sodium/glucose symporter superfamily M4S28_10875 IPR001734 Sodium/solute symporter M4S28_10885 IPR004090 Chemotaxis methyl-accepting receptor M4S28_10885 IPR003660 HAMP domain M4S28_10885 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_10885 IPR033480 Single Cache domain 2 M4S28_10895 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type M4S28_10895 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_10895 IPR004013 PHP domain M4S28_10895 IPR012337 Ribonuclease H-like superfamily M4S28_10895 IPR012340 Nucleic acid-binding, OB-fold M4S28_10895 IPR036397 Ribonuclease H superfamily M4S28_10895 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M4S28_10895 IPR029460 DNA polymerase, helix-hairpin-helix motif M4S28_10895 IPR024754 DNA polymerase III polC-like, N-terminal domain II M4S28_10895 IPR040982 DNA polymerase III alpha subunit finger domain M4S28_10895 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M4S28_10895 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_10900 IPR000644 CBS domain M4S28_10905 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_10905 IPR000524 Transcription regulator HTH, GntR M4S28_10905 IPR011711 GntR, C-terminal M4S28_10905 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_10905 IPR036390 Winged helix DNA-binding domain superfamily M4S28_10910 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_10910 IPR036291 NAD(P)-binding domain superfamily M4S28_10910 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_10915 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_10915 IPR011711 GntR, C-terminal M4S28_10915 IPR000524 Transcription regulator HTH, GntR M4S28_10915 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_10915 IPR036390 Winged helix DNA-binding domain superfamily M4S28_10925 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M4S28_10925 IPR014895 Alginate lyase 2 M4S28_10935 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M4S28_10935 IPR014895 Alginate lyase 2 M4S28_10945 IPR003660 HAMP domain M4S28_10945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_10945 IPR029151 Periplasmic sensor-like domain superfamily M4S28_10945 IPR033479 Double Cache domain 1 M4S28_10950 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_10950 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_10950 IPR015815 3-hydroxyisobutyrate dehydrogenase-related M4S28_10950 IPR011548 3-hydroxyisobutyrate dehydrogenase M4S28_10950 IPR036291 NAD(P)-binding domain superfamily M4S28_10950 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain M4S28_10950 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M4S28_10950 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site M4S28_10960 IPR038377 Sodium/glucose symporter superfamily M4S28_10960 IPR001734 Sodium/solute symporter M4S28_10965 IPR036390 Winged helix DNA-binding domain superfamily M4S28_10965 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_10965 IPR000524 Transcription regulator HTH, GntR M4S28_10965 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_10965 IPR011711 GntR, C-terminal M4S28_10970 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit M4S28_10970 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit M4S28_10970 IPR011234 Fumarylacetoacetase-like, C-terminal M4S28_10970 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily M4S28_10975 IPR008397 Alginate lyase domain M4S28_10975 IPR008929 Chondroitin AC/alginate lyase M4S28_10975 IPR012480 Heparinase II/III-like M4S28_10980 IPR012480 Heparinase II/III-like M4S28_10980 IPR008397 Alginate lyase domain M4S28_10980 IPR008929 Chondroitin AC/alginate lyase M4S28_10985 IPR011051 RmlC-like cupin domain superfamily M4S28_10985 IPR014710 RmlC-like jelly roll fold M4S28_10985 IPR025499 Pectin degradation protein KdgF M4S28_10985 IPR013096 Cupin 2, conserved barrel M4S28_10990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_10990 IPR011611 Carbohydrate kinase PfkB M4S28_10990 IPR029056 Ribokinase-like M4S28_10995 IPR000887 KDPG/KHG aldolase M4S28_10995 IPR013785 Aldolase-type TIM barrel M4S28_10995 IPR031337 KDPG/KHG aldolase, active site 1 M4S28_10995 IPR031338 KDPG/KHG aldolase, active site 2 M4S28_11000 IPR018212 Sodium/solute symporter, conserved site M4S28_11000 IPR001734 Sodium/solute symporter M4S28_11000 IPR038377 Sodium/glucose symporter superfamily M4S28_11000 IPR011851 Sodium/proline symporter M4S28_11005 IPR023346 Lysozyme-like domain superfamily M4S28_11005 IPR023703 Membrane-bound lytic murein transglycosylase F M4S28_11005 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_11005 IPR000189 Prokaryotic transglycosylase, active site M4S28_11005 IPR008258 Transglycosylase SLT domain 1 M4S28_11020 IPR020855 Ureohydrolase, manganese-binding site M4S28_11020 IPR023696 Ureohydrolase domain superfamily M4S28_11020 IPR005925 Agmatinase-related M4S28_11020 IPR023694 Agmatinase M4S28_11020 IPR006035 Ureohydrolase M4S28_11025 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M4S28_11025 IPR040634 Arginine decarboxylase, helical bundle domain M4S28_11025 IPR041128 Arginine decarboxylase, C-terminal helical M4S28_11025 IPR002985 Arginine decarboxylase M4S28_11025 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M4S28_11025 IPR000183 Ornithine/DAP/Arg decarboxylase M4S28_11025 IPR029066 PLP-binding barrel M4S28_11030 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent M4S28_11030 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_11030 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_11030 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_11030 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_11030 IPR015590 Aldehyde dehydrogenase domain M4S28_11035 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_11035 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal M4S28_11035 IPR001647 DNA-binding HTH domain, TetR-type M4S28_11035 IPR009057 Homeobox-like domain superfamily M4S28_11040 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M4S28_11040 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11040 IPR017871 ABC transporter, conserved site M4S28_11040 IPR003439 ABC transporter-like M4S28_11040 IPR032781 ABC-transporter extension domain M4S28_11040 IPR032524 ABC transporter Uup, C-terminal M4S28_11040 IPR003593 AAA+ ATPase domain M4S28_11055 IPR007374 ASCH domain M4S28_11055 IPR008314 Uncharacterised conserved protein UCP029143 M4S28_11055 IPR015947 PUA-like superfamily M4S28_11060 IPR005813 Ribosomal protein L20 M4S28_11060 IPR035566 Ribosomal protein L20, C-terminal M4S28_11065 IPR018265 Ribosomal protein L35, conserved site M4S28_11065 IPR001706 Ribosomal protein L35, non-mitochondrial M4S28_11065 IPR021137 Ribosomal protein L35 M4S28_11065 IPR037229 Ribosomal protein L35 superfamily M4S28_11070 IPR019815 Translation initiation factor 3, C-terminal M4S28_11070 IPR019814 Translation initiation factor 3, N-terminal M4S28_11070 IPR001288 Translation initiation factor 3 M4S28_11070 IPR019813 Translation initiation factor 3, conserved site M4S28_11070 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily M4S28_11070 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily M4S28_11075 IPR012675 Beta-grasp domain superfamily M4S28_11075 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M4S28_11075 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M4S28_11075 IPR033728 Threonine-tRNA ligase catalytic core domain M4S28_11075 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_11075 IPR036621 Anticodon-binding domain superfamily M4S28_11075 IPR002320 Threonine-tRNA ligase, class IIa M4S28_11075 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M4S28_11075 IPR004154 Anticodon-binding M4S28_11075 IPR004095 TGS M4S28_11075 IPR012676 TGS-like M4S28_11080 IPR014752 Arrestin, C-terminal M4S28_11080 IPR009776 Sporulation stage 0, protein M M4S28_11080 IPR014756 Immunoglobulin E-set M4S28_11085 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_11085 IPR010248 Histidine utilization repressor M4S28_11085 IPR000524 Transcription regulator HTH, GntR M4S28_11085 IPR011663 UbiC transcription regulator-associated M4S28_11085 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11085 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11090 IPR032466 Metal-dependent hydrolase M4S28_11090 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_11090 IPR005920 Imidazolonepropionase M4S28_11090 IPR006680 Amidohydrolase-related M4S28_11095 IPR005923 Formiminoglutamase M4S28_11095 IPR006035 Ureohydrolase M4S28_11095 IPR023696 Ureohydrolase domain superfamily M4S28_11095 IPR020855 Ureohydrolase, manganese-binding site M4S28_11100 IPR038364 Urocanase, central domain superfamily M4S28_11100 IPR023636 Urocanase conserved site M4S28_11100 IPR035400 Urocanase, N-terminal domain M4S28_11100 IPR035085 Urocanase, Rossmann-like domain M4S28_11100 IPR023637 Urocanase M4S28_11100 IPR036190 Urocanase superfamily M4S28_11100 IPR035401 Urocanase, C-terminal domain M4S28_11105 IPR024083 Fumarase/histidase, N-terminal M4S28_11105 IPR005921 Histidine ammonia-lyase M4S28_11105 IPR008948 L-Aspartase-like M4S28_11105 IPR022313 Phenylalanine/histidine ammonia-lyases, active site M4S28_11105 IPR001106 Aromatic amino acid lyase M4S28_11115 IPR007318 Phospholipid methyltransferase M4S28_11120 IPR006094 FAD linked oxidase, N-terminal M4S28_11120 IPR004113 FAD-linked oxidase, C-terminal M4S28_11120 IPR016164 FAD-linked oxidase-like, C-terminal M4S28_11120 IPR009051 Alpha-helical ferredoxin M4S28_11120 IPR016166 FAD-binding domain, PCMH-type M4S28_11120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_11120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_11120 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_11135 IPR036737 OmpA-like domain superfamily M4S28_11135 IPR006664 Outer membrane protein, bacterial M4S28_11135 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_11135 IPR006665 OmpA-like domain M4S28_11155 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type M4S28_11155 IPR028923 SAICAR synthetase/ADE2, N-terminal M4S28_11165 IPR024590 RNA helicase HrpA, C-terminal M4S28_11165 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11165 IPR001650 Helicase, C-terminal M4S28_11165 IPR007502 Helicase-associated domain M4S28_11165 IPR010222 RNA helicase HrpA M4S28_11165 IPR011709 Domain of unknown function DUF1605 M4S28_11165 IPR011545 DEAD/DEAH box helicase domain M4S28_11165 IPR003593 AAA+ ATPase domain M4S28_11165 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_11170 IPR037062 Malic enzyme, N-terminal domain superfamily M4S28_11170 IPR015884 Malic enzyme, conserved site M4S28_11170 IPR012301 Malic enzyme, N-terminal domain M4S28_11170 IPR012302 Malic enzyme, NAD-binding M4S28_11170 IPR001891 Malic oxidoreductase M4S28_11170 IPR036291 NAD(P)-binding domain superfamily M4S28_11170 IPR023667 NAD-dependent malic enzyme, proteobacteria M4S28_11175 IPR003848 Domain of unknown function DUF218 M4S28_11175 IPR023604 Uncharacterised protein family SanA M4S28_11180 IPR031312 Sodium/sulphate symporter, conserved site M4S28_11180 IPR001898 Solute carrier family 13 M4S28_11185 IPR009707 Membrane protein GlpM/YdgC M4S28_11190 IPR029787 Nucleotide cyclase M4S28_11190 IPR001789 Signal transduction response regulator, receiver domain M4S28_11190 IPR011006 CheY-like superfamily M4S28_11190 IPR000160 GGDEF domain M4S28_11200 IPR029787 Nucleotide cyclase M4S28_11200 IPR000160 GGDEF domain M4S28_11200 IPR029016 GAF-like domain superfamily M4S28_11205 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11205 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11205 IPR005119 LysR, substrate-binding M4S28_11205 IPR000847 Transcription regulator HTH, LysR M4S28_11215 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M4S28_11215 IPR010970 Cysteine desulfurase, SufS M4S28_11215 IPR000192 Aminotransferase class V domain M4S28_11215 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_11215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_11215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_11215 IPR016454 Cysteine desulfurase M4S28_11240 IPR023753 FAD/NAD(P)-binding domain M4S28_11240 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site M4S28_11240 IPR005982 Thioredoxin reductase M4S28_11240 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_11245 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11245 IPR039421 Type I protein exporter M4S28_11245 IPR003593 AAA+ ATPase domain M4S28_11245 IPR011527 ABC transporter type 1, transmembrane domain M4S28_11245 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_11245 IPR003439 ABC transporter-like M4S28_11245 IPR017871 ABC transporter, conserved site M4S28_11245 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD M4S28_11250 IPR003593 AAA+ ATPase domain M4S28_11250 IPR011527 ABC transporter type 1, transmembrane domain M4S28_11250 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_11250 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC M4S28_11250 IPR003439 ABC transporter-like M4S28_11250 IPR017871 ABC transporter, conserved site M4S28_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11280 IPR000700 PAS-associated, C-terminal M4S28_11280 IPR000014 PAS domain M4S28_11280 IPR035919 EAL domain superfamily M4S28_11280 IPR001633 EAL domain M4S28_11280 IPR000160 GGDEF domain M4S28_11280 IPR029787 Nucleotide cyclase M4S28_11280 IPR001610 PAC motif M4S28_11280 IPR035965 PAS domain superfamily M4S28_11280 IPR012226 Diguanylate cyclase/phosphodiesterase M4S28_11290 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11290 IPR019734 Tetratricopeptide repeat M4S28_11290 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_11290 IPR013026 Tetratricopeptide repeat-containing domain M4S28_11290 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_11290 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_11295 IPR018219 Thiol peroxidase conserved site M4S28_11295 IPR002065 Thiol peroxidase Tpx M4S28_11295 IPR013740 Redoxin M4S28_11295 IPR036249 Thioredoxin-like superfamily M4S28_11295 IPR013766 Thioredoxin domain M4S28_11305 IPR029151 Periplasmic sensor-like domain superfamily M4S28_11305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_11305 IPR003660 HAMP domain M4S28_11305 IPR033479 Double Cache domain 1 M4S28_11305 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding M4S28_11310 IPR018093 BCCT transporter, conserved site M4S28_11310 IPR000060 BCCT transporter family M4S28_11315 IPR018093 BCCT transporter, conserved site M4S28_11315 IPR000060 BCCT transporter family M4S28_11320 IPR001789 Signal transduction response regulator, receiver domain M4S28_11320 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_11320 IPR000792 Transcription regulator LuxR, C-terminal M4S28_11320 IPR011006 CheY-like superfamily M4S28_11325 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_11325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_11325 IPR033480 Single Cache domain 2 M4S28_11325 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M4S28_11325 IPR017171 Signal transduction histidine kinase, MctS M4S28_11330 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_11330 IPR004681 TRAP transporter large membrane protein DctM M4S28_11340 IPR026289 Solute binding protein, TakP-like M4S28_11340 IPR041722 Alpha-keto acid binding periplasmic protein M4S28_11340 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_11340 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_11355 IPR001279 Metallo-beta-lactamase M4S28_11355 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_11360 IPR010275 Protein of unknown function DUF882 M4S28_11360 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily M4S28_11360 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_11365 IPR038063 L,D-transpeptidase catalytic domain-like M4S28_11365 IPR036365 PGBD-like superfamily M4S28_11365 IPR005490 L,D-transpeptidase catalytic domain M4S28_11365 IPR002477 Peptidoglycan binding-like M4S28_11390 IPR032677 GTP cyclohydrolase II M4S28_11390 IPR000926 GTP cyclohydrolase II, RibA M4S28_11390 IPR036144 RibA-like superfamily M4S28_11400 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_11400 IPR005616 CcmH/CycL/Ccl2/NrfF family M4S28_11400 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M4S28_11400 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF M4S28_11400 IPR013026 Tetratricopeptide repeat-containing domain M4S28_11400 IPR019734 Tetratricopeptide repeat M4S28_11405 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE M4S28_11405 IPR013740 Redoxin M4S28_11405 IPR036249 Thioredoxin-like superfamily M4S28_11405 IPR017937 Thioredoxin, conserved site M4S28_11405 IPR013766 Thioredoxin domain M4S28_11410 IPR003570 Cytochrome c-type biogenesis protein NrfE M4S28_11410 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE M4S28_11410 IPR003568 Cytochrome c-type biogenesis protein CcmF M4S28_11410 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M4S28_11410 IPR002541 Cytochrome c assembly protein M4S28_11410 IPR003567 Cytochrome c-type biogenesis protein M4S28_11415 IPR005614 NrfD family M4S28_11415 IPR017566 NrfD M4S28_11420 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_11420 IPR017567 Cytochrome c nitrite reductase, Fe-S protein M4S28_11420 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_11420 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_11425 IPR036280 Multiheme cytochrome superfamily M4S28_11425 IPR011031 Multihaem cytochrome M4S28_11425 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit M4S28_11430 IPR011031 Multihaem cytochrome M4S28_11430 IPR003321 Cytochrome c552 M4S28_11430 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit M4S28_11430 IPR036280 Multiheme cytochrome superfamily M4S28_11435 IPR036873 Rhodanese-like domain superfamily M4S28_11435 IPR001763 Rhodanese-like domain M4S28_11435 IPR014323 Phage shock protein, PspE M4S28_11445 IPR013760 DNA topoisomerase, type IIA-like domain superfamily M4S28_11445 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M4S28_11445 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat M4S28_11445 IPR005743 DNA gyrase, subunit A M4S28_11445 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta M4S28_11445 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal M4S28_11445 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily M4S28_11450 IPR010233 Ubiquinone biosynthesis O-methyltransferase M4S28_11450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_11455 IPR000788 Ribonucleotide reductase large subunit, C-terminal M4S28_11455 IPR013346 Ribonucleotide reductase, class I , alpha subunit M4S28_11455 IPR005144 ATP-cone domain M4S28_11455 IPR039718 Ribonucleoside-diphosphate reductase large subunit M4S28_11455 IPR013509 Ribonucleotide reductase large subunit, N-terminal M4S28_11455 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal M4S28_11460 IPR033909 Ribonucleotide reductase small subunit M4S28_11460 IPR009078 Ferritin-like superfamily M4S28_11460 IPR012348 Ribonucleotide reductase-like M4S28_11460 IPR030475 Ribonucleotide reductase small subunit, acitve site M4S28_11460 IPR000358 Ribonucleotide reductase small subunit family M4S28_11465 IPR017938 Riboflavin synthase-like beta-barrel M4S28_11465 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M4S28_11465 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_11465 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_11465 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M4S28_11465 IPR012675 Beta-grasp domain superfamily M4S28_11465 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M4S28_11465 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_11465 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_11465 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_11475 IPR026269 Tat proofreading chaperone DmsD-type M4S28_11475 IPR028611 Tat proofreading chaperone DmsD M4S28_11475 IPR036411 TorD-like superfamily M4S28_11475 IPR020945 DMSO/Nitrate reductase chaperone M4S28_11480 IPR006656 Molybdopterin oxidoreductase M4S28_11480 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_11480 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_11480 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE M4S28_11480 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_11480 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_11480 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M4S28_11480 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site M4S28_11480 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site M4S28_11485 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_11485 IPR014297 Dimethylsulphoxide reductase, chain B M4S28_11485 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_11490 IPR007059 DMSO reductase anchor subunit (DmsC) M4S28_11495 IPR036653 CinA-like, C-terminal M4S28_11495 IPR008135 Competence-induced protein CinA M4S28_11495 IPR036425 MoaB/Mog-like domain superfamily M4S28_11495 IPR001453 MoaB/Mog domain M4S28_11510 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal M4S28_11510 IPR005730 Carboxynorspermidine decarboxylase M4S28_11510 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M4S28_11510 IPR029066 PLP-binding barrel M4S28_11515 IPR032095 Saccharopine dehydrogenase, C-terminal M4S28_11515 IPR036291 NAD(P)-binding domain superfamily M4S28_11515 IPR005097 Saccharopine dehydrogenase, NADP binding domain M4S28_11520 IPR004637 2,4-diaminobutyrate 4-transaminase M4S28_11520 IPR005814 Aminotransferase class-III M4S28_11520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_11520 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_11520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_11545 IPR000462 CDP-alcohol phosphatidyltransferase M4S28_11545 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial M4S28_11545 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase M4S28_11550 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M4S28_11550 IPR035901 GIY-YIG endonuclease superfamily M4S28_11550 IPR036876 UVR domain superfamily M4S28_11550 IPR001943 UVR domain M4S28_11550 IPR001162 UvrC family homology region M4S28_11550 IPR038476 UvrC homology region 2 superfamily M4S28_11550 IPR010994 RuvA domain 2-like M4S28_11550 IPR000305 GIY-YIG endonuclease M4S28_11550 IPR004791 UvrABC system, subunit C M4S28_11555 IPR011006 CheY-like superfamily M4S28_11555 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_11555 IPR001789 Signal transduction response regulator, receiver domain M4S28_11555 IPR000792 Transcription regulator LuxR, C-terminal M4S28_11560 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain M4S28_11560 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain M4S28_11560 IPR042087 DNA polymerase family B, C-terminal domain M4S28_11560 IPR023211 DNA polymerase, palm domain superfamily M4S28_11560 IPR012337 Ribonuclease H-like superfamily M4S28_11560 IPR036397 Ribonuclease H superfamily M4S28_11560 IPR017964 DNA-directed DNA polymerase, family B, conserved site M4S28_11560 IPR006172 DNA-directed DNA polymerase, family B M4S28_11570 IPR013185 Translation elongation factor, KOW-like M4S28_11570 IPR020599 Translation elongation factor P/YeiP M4S28_11570 IPR014722 Ribosomal protein L2, domain 2 M4S28_11570 IPR015365 Elongation factor P, C-terminal M4S28_11570 IPR012340 Nucleic acid-binding, OB-fold M4S28_11570 IPR011897 Translation elongation factor P-like, YeiP M4S28_11570 IPR001059 Translation elongation factor P/YeiP, central M4S28_11570 IPR013852 Translation elongation factor P/YeiP, conserved site M4S28_11570 IPR008991 Translation protein SH3-like domain superfamily M4S28_11575 IPR007376 dsDNA mimic, putative M4S28_11575 IPR036763 Putative dsDNA mimic superfamily M4S28_11585 IPR002942 RNA-binding S4 domain M4S28_11585 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_11585 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M4S28_11585 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M4S28_11585 IPR036986 RNA-binding S4 domain superfamily M4S28_11585 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M4S28_11585 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_11590 IPR006070 YrdC-like domain M4S28_11590 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M4S28_11595 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_11595 IPR016195 Polymerase/histidinol phosphatase-like M4S28_11595 IPR004013 PHP domain M4S28_11600 IPR012639 Tryptophan operon leader peptide M4S28_11605 IPR015890 Chorismate-utilising enzyme, C-terminal M4S28_11605 IPR005801 ADC synthase M4S28_11605 IPR019999 Anthranilate synthase component I-like M4S28_11605 IPR006805 Anthranilate synthase component I, N-terminal M4S28_11605 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial M4S28_11610 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain M4S28_11610 IPR017926 Glutamine amidotransferase M4S28_11610 IPR029062 Class I glutamine amidotransferase-like M4S28_11615 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M4S28_11615 IPR005940 Anthranilate phosphoribosyl transferase M4S28_11615 IPR000312 Glycosyl transferase, family 3 M4S28_11615 IPR017459 Glycosyl transferase family 3, N-terminal domain M4S28_11615 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M4S28_11620 IPR001468 Indole-3-glycerol phosphate synthase, conserved site M4S28_11620 IPR011060 Ribulose-phosphate binding barrel M4S28_11620 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) M4S28_11620 IPR013798 Indole-3-glycerol phosphate synthase M4S28_11620 IPR013785 Aldolase-type TIM barrel M4S28_11625 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_11625 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_11625 IPR006653 Tryptophan synthase, beta chain, conserved site M4S28_11625 IPR006654 Tryptophan synthase, beta chain M4S28_11625 IPR023026 Tryptophan synthase beta chain/beta chain-like M4S28_11630 IPR011060 Ribulose-phosphate binding barrel M4S28_11630 IPR018204 Tryptophan synthase, alpha chain, active site M4S28_11630 IPR002028 Tryptophan synthase, alpha chain M4S28_11630 IPR013785 Aldolase-type TIM barrel M4S28_11635 IPR032435 Band 7, C-terminal extension M4S28_11635 IPR001972 Stomatin family M4S28_11635 IPR036013 Band 7/SPFH domain superfamily M4S28_11635 IPR018080 Band 7/stomatin-like, conserved site M4S28_11635 IPR001107 Band 7 domain M4S28_11645 IPR023954 C4-dicarboxylate transport protein M4S28_11645 IPR001991 Sodium:dicarboxylate symporter M4S28_11645 IPR018107 Sodium:dicarboxylate symporter, conserved site M4S28_11645 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_11650 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_11650 IPR004681 TRAP transporter large membrane protein DctM M4S28_11655 IPR007387 TRAP transporter, small membrane protein DctQ M4S28_11660 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_11660 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_11660 IPR004682 TRAP transporter solute receptor, DctP family M4S28_11665 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_11665 IPR018313 Solute-binding protein family 3, conserved site M4S28_11665 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M4S28_11670 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_11670 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M4S28_11670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_11670 IPR004839 Aminotransferase, class I/classII M4S28_11670 IPR005861 Histidinol-phosphate aminotransferase family M4S28_11670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_11675 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11675 IPR000847 Transcription regulator HTH, LysR M4S28_11675 IPR005119 LysR, substrate-binding M4S28_11675 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11685 IPR006008 Intracellular septation protein A M4S28_11690 IPR006683 Thioesterase domain M4S28_11690 IPR029069 HotDog domain superfamily M4S28_11690 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain M4S28_11690 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase M4S28_11695 IPR005545 YCII-related M4S28_11695 IPR011008 Dimeric alpha-beta barrel M4S28_11705 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal M4S28_11705 IPR038071 UROD/MetE-like superfamily M4S28_11705 IPR006276 Cobalamin-independent methionine synthase M4S28_11705 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal M4S28_11710 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain M4S28_11710 IPR000847 Transcription regulator HTH, LysR M4S28_11710 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11710 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11710 IPR005119 LysR, substrate-binding M4S28_11725 IPR006638 Elp3/MiaB/NifB M4S28_11725 IPR020612 Methylthiotransferase, conserved site M4S28_11725 IPR007197 Radical SAM M4S28_11725 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_11725 IPR024560 Uncharacterised protein family UPF0313, C-terminal M4S28_11725 IPR022946 Uncharacterised protein family UPF0313 M4S28_11725 IPR013704 Uncharacterised protein family UPF0313, N-terminal M4S28_11735 IPR003342 Glycosyl transferase family 39/83 M4S28_11735 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase M4S28_11740 IPR001173 Glycosyltransferase 2-like M4S28_11740 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_11745 IPR011006 CheY-like superfamily M4S28_11745 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_11745 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response M4S28_11745 IPR001789 Signal transduction response regulator, receiver domain M4S28_11745 IPR039420 Transcriptional regulatory protein WalR-like M4S28_11745 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11765 IPR006076 FAD dependent oxidoreductase M4S28_11765 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_11765 IPR023080 D-amino acid dehydrogenase DadA M4S28_11770 IPR000847 Transcription regulator HTH, LysR M4S28_11770 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11770 IPR005119 LysR, substrate-binding M4S28_11770 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11780 IPR010574 L-alanine exporter AlaE M4S28_11785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_11785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_11785 IPR015387 LuxQ, periplasmic M4S28_11785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_11785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_11785 IPR001789 Signal transduction response regulator, receiver domain M4S28_11785 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_11785 IPR011006 CheY-like superfamily M4S28_11785 IPR005467 Histidine kinase domain M4S28_11785 IPR029151 Periplasmic sensor-like domain superfamily M4S28_11800 IPR023513 Quinolinate synthase A, type 1 M4S28_11800 IPR036094 Quinolinate synthetase A superfamily M4S28_11800 IPR003473 Quinolinate synthetase A M4S28_11805 IPR034706 Cell division coordinator CpoB M4S28_11805 IPR014162 Cell division coordinator CpoB, C-terminal M4S28_11805 IPR013026 Tetratricopeptide repeat-containing domain M4S28_11805 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_11805 IPR019734 Tetratricopeptide repeat M4S28_11805 IPR032519 YbgF, trimerisation domain M4S28_11810 IPR036737 OmpA-like domain superfamily M4S28_11810 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal M4S28_11810 IPR039001 Peptidoglycan-associated lipoprotein M4S28_11810 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_11810 IPR006665 OmpA-like domain M4S28_11810 IPR006664 Outer membrane protein, bacterial M4S28_11815 IPR011659 WD40-like Beta Propeller M4S28_11815 IPR036752 TolB, N-terminal domain superfamily M4S28_11815 IPR011042 Six-bladed beta-propeller, TolB-like M4S28_11815 IPR007195 TolB, N-terminal M4S28_11815 IPR014167 Tol-Pal system protein TolB M4S28_11825 IPR003400 Biopolymer transport protein ExbD/TolR M4S28_11825 IPR014168 Tol-Pal system protein TolR M4S28_11830 IPR002898 MotA/TolQ/ExbB proton channel M4S28_11830 IPR014163 Tol-Pal system, TolQ M4S28_11835 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site M4S28_11835 IPR029069 HotDog domain superfamily M4S28_11835 IPR006683 Thioesterase domain M4S28_11835 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase M4S28_11835 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family M4S28_11845 IPR011724 Cyd operon protein YbgT M4S28_11845 IPR012994 Membrane bound YbgT-like M4S28_11850 IPR003317 Cytochrome ubiquinol oxidase subunit 2 M4S28_11855 IPR002585 Cytochrome ubiquinol oxidase subunit 1 M4S28_11860 IPR003593 AAA+ ATPase domain M4S28_11860 IPR041445 RuvB, AAA lid domain M4S28_11860 IPR004605 DNA helicase, Holliday junction RuvB-type M4S28_11860 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11860 IPR008824 RuvB-like P-loop domain M4S28_11860 IPR008823 RuvB C-terminal winged helix domain M4S28_11860 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11860 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11865 IPR012340 Nucleic acid-binding, OB-fold M4S28_11865 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 M4S28_11865 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial M4S28_11865 IPR000085 Bacterial DNA recombination protein RuvA M4S28_11865 IPR010994 RuvA domain 2-like M4S28_11865 IPR011114 Holliday junction DNA helicase RuvA, C-terminal M4S28_11865 IPR036267 RuvA, C-terminal domain superfamily M4S28_11870 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily M4S28_11870 IPR004090 Chemotaxis methyl-accepting receptor M4S28_11870 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site M4S28_11870 IPR003660 HAMP domain M4S28_11870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_11870 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding M4S28_11875 IPR002176 Crossover junction endodeoxyribonuclease RuvC M4S28_11875 IPR036397 Ribonuclease H superfamily M4S28_11875 IPR012337 Ribonuclease H-like superfamily M4S28_11880 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) M4S28_11880 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_11880 IPR004524 Aspartate-tRNA ligase, type 1 M4S28_11880 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb M4S28_11880 IPR004115 GAD-like domain superfamily M4S28_11880 IPR029351 GAD domain M4S28_11880 IPR012340 Nucleic acid-binding, OB-fold M4S28_11880 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M4S28_11885 IPR036520 UPF0759 superfamily M4S28_11885 IPR002763 Protein of unknown function DUF72 M4S28_11890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_11890 IPR041698 Methyltransferase domain 25 M4S28_11890 IPR005271 Carboxy-S-adenosyl-L-methionine synthase M4S28_11895 IPR010017 tRNA U34 carboxymethyltransferase M4S28_11895 IPR027555 tRNA (mo5U34)-methyltransferase-like M4S28_11895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_11900 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M4S28_11900 IPR011761 ATP-grasp fold M4S28_11900 IPR013651 ATP-grasp fold, RimK-type M4S28_11900 IPR013815 ATP-grasp fold, subdomain 1 M4S28_11900 IPR021109 Aspartic peptidase domain superfamily M4S28_11900 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M4S28_11900 IPR041107 RimK, PreATP-grasp domain M4S28_11915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_11915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_11915 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_11915 IPR041924 Formate dehydrogenase H, N-terminal M4S28_11915 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding M4S28_11915 IPR006478 Formate dehydrogenase, alpha subunit M4S28_11915 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_11915 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_11915 IPR006656 Molybdopterin oxidoreductase M4S28_11915 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_11915 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_11920 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_11920 IPR007406 MukB, N-terminal domain M4S28_11920 IPR032520 MukB, hinge domain M4S28_11920 IPR012090 Chromosome partition protein MukB M4S28_11925 IPR042038 MukE, N-terminal domain M4S28_11925 IPR042037 MukE, C-terminal domain M4S28_11925 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE M4S28_11930 IPR005582 Chromosome partition protein MukF M4S28_11930 IPR036141 MukF, middle domain superfamily M4S28_11930 IPR033440 Chromosome partition protein MukF, middle domain M4S28_11930 IPR038198 MukF, C-terminal domain superfamily M4S28_11930 IPR033439 Chromosome partition protein MukF, winged-helix domain M4S28_11930 IPR033441 Chromosome partition protein MukF, C-terminal domain M4S28_11930 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11930 IPR036390 Winged helix DNA-binding domain superfamily M4S28_11935 IPR025714 Methyltransferase domain M4S28_11935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_11935 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase M4S28_11940 IPR003848 Domain of unknown function DUF218 M4S28_11945 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_11945 IPR039420 Transcriptional regulatory protein WalR-like M4S28_11945 IPR001789 Signal transduction response regulator, receiver domain M4S28_11945 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_11945 IPR011006 CheY-like superfamily M4S28_11950 IPR020945 DMSO/Nitrate reductase chaperone M4S28_11950 IPR023069 Chaperone TorD M4S28_11950 IPR036411 TorD-like superfamily M4S28_11950 IPR036386 HscB, C-terminal domain superfamily M4S28_11955 IPR023588 Transcription regulator HTH, PurR M4S28_11955 IPR028082 Periplasmic binding protein-like I M4S28_11955 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_11955 IPR000843 LacI-type HTH domain M4S28_11960 IPR026256 Transcriptional regulator, TfoX/Sxy-type M4S28_11960 IPR007076 TfoX, N-terminal M4S28_11960 IPR007077 TfoX, C-terminal M4S28_11985 IPR011835 Bacterial/plant glycogen synthase M4S28_11985 IPR001296 Glycosyl transferase, family 1 M4S28_11985 IPR013534 Starch synthase, catalytic domain M4S28_11990 IPR005835 Nucleotidyl transferase domain M4S28_11990 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_11990 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial M4S28_11990 IPR005836 ADP-glucose pyrophosphorylase, conserved site M4S28_11990 IPR011831 Glucose-1-phosphate adenylyltransferase M4S28_11990 IPR011004 Trimeric LpxA-like superfamily M4S28_11995 IPR034149 DNA topoisomerase 1, TOPRIM domain M4S28_11995 IPR013498 DNA topoisomerase, type IA, zn finger M4S28_11995 IPR028612 DNA topoisomerase I, type IA M4S28_11995 IPR003602 DNA topoisomerase, type IA, DNA-binding domain M4S28_11995 IPR023405 DNA topoisomerase, type IA, core domain M4S28_11995 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M4S28_11995 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type M4S28_11995 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M4S28_11995 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M4S28_11995 IPR013497 DNA topoisomerase, type IA, central M4S28_11995 IPR023406 DNA topoisomerase, type IA, active site M4S28_11995 IPR003601 DNA topoisomerase, type IA, domain 2 M4S28_11995 IPR000380 DNA topoisomerase, type IA M4S28_11995 IPR005733 DNA topoisomerase I, bacterial-type M4S28_11995 IPR006171 TOPRIM domain M4S28_12000 IPR019633 Protein of unknown function DUF2498 M4S28_12000 IPR038191 YciN superfamily M4S28_12005 IPR001986 Enolpyruvate transferase domain M4S28_12005 IPR036968 Enolpyruvate transferase domain superfamily M4S28_12005 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase M4S28_12005 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site M4S28_12005 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M4S28_12015 IPR016181 Acyl-CoA N-acyltransferase M4S28_12015 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal M4S28_12015 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase M4S28_12020 IPR030700 N-end rule aminoacyl transferase M4S28_12020 IPR016181 Acyl-CoA N-acyltransferase M4S28_12020 IPR007472 N-end rule aminoacyl transferase, C-terminal M4S28_12020 IPR017138 Aspartate/glutamate leucyltransferase M4S28_12020 IPR007471 N-end aminoacyl transferase, N-terminal M4S28_12025 IPR004368 Translation initiation factor IF-1 M4S28_12025 IPR022967 RNA-binding domain, S1 M4S28_12025 IPR006196 RNA-binding domain, S1, IF1 type M4S28_12025 IPR012340 Nucleic acid-binding, OB-fold M4S28_12030 IPR001270 ClpA/B family M4S28_12030 IPR041546 ClpA/ClpB, AAA lid domain M4S28_12030 IPR028299 ClpA/B, conserved site 2 M4S28_12030 IPR018368 ClpA/B, conserved site 1 M4S28_12030 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA M4S28_12030 IPR004176 Clp, N-terminal M4S28_12030 IPR036628 Clp, N-terminal domain superfamily M4S28_12030 IPR019489 Clp ATPase, C-terminal M4S28_12030 IPR003593 AAA+ ATPase domain M4S28_12030 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12030 IPR003959 ATPase, AAA-type, core M4S28_12035 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M4S28_12035 IPR022935 ATP-dependent Clp protease adaptor protein ClpS M4S28_12035 IPR003769 Adaptor protein ClpS, core M4S28_12040 IPR012340 Nucleic acid-binding, OB-fold M4S28_12040 IPR012751 CspD, cold shock M4S28_12040 IPR002059 Cold-shock protein, DNA-binding M4S28_12040 IPR019844 Cold-shock (CSD) domain M4S28_12040 IPR011129 Cold shock domain M4S28_12040 IPR012156 Cold shock, CspA M4S28_12045 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric M4S28_12050 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_12050 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain M4S28_12050 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_12050 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F M4S28_12050 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site M4S28_12065 IPR006555 ATP-dependent helicase, C-terminal M4S28_12065 IPR010614 DEAD2 M4S28_12065 IPR039000 ATP-dependent DNA helicase DinG M4S28_12065 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type M4S28_12065 IPR001650 Helicase, C-terminal M4S28_12065 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12070 IPR002781 Transmembrane protein TauE-like M4S28_12080 IPR019630 Protein of unknown function DUF2496, YbaM-related M4S28_12085 IPR003347 JmjC domain M4S28_12085 IPR039994 JmjC domain-containing M4S28_12090 IPR003660 HAMP domain M4S28_12090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_12095 IPR011701 Major facilitator superfamily M4S28_12095 IPR020846 Major facilitator superfamily domain M4S28_12095 IPR036259 MFS transporter superfamily M4S28_12095 IPR004734 Multidrug resistance protein M4S28_12100 IPR002470 Peptidase S9A, prolyl oligopeptidase M4S28_12100 IPR002471 Peptidase S9, serine active site M4S28_12100 IPR023302 Peptidase S9A, N-terminal domain M4S28_12100 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain M4S28_12100 IPR029058 Alpha/Beta hydrolase fold M4S28_12105 IPR004808 AP endonuclease 1 M4S28_12105 IPR020848 AP endonuclease 1, conserved site M4S28_12105 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M4S28_12105 IPR005135 Endonuclease/exonuclease/phosphatase M4S28_12105 IPR037493 Exodeoxyribonuclease III-like M4S28_12105 IPR020847 AP endonuclease 1, binding site M4S28_12110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_12110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_12110 IPR035906 MetI-like superfamily M4S28_12115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_12115 IPR030199 Histidine transport system permease protein HisQ M4S28_12115 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_12115 IPR035906 MetI-like superfamily M4S28_12120 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter M4S28_12120 IPR018313 Solute-binding protein family 3, conserved site M4S28_12120 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_12125 IPR003593 AAA+ ATPase domain M4S28_12125 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M4S28_12125 IPR003439 ABC transporter-like M4S28_12125 IPR017871 ABC transporter, conserved site M4S28_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12135 IPR005949 Formate acetyltransferase M4S28_12135 IPR001150 Glycine radical domain M4S28_12135 IPR004184 Pyruvate formate lyase domain M4S28_12135 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M4S28_12145 IPR013785 Aldolase-type TIM barrel M4S28_12145 IPR034457 Organic radical-activating enzymes M4S28_12145 IPR012839 Organic radical enzyme activase M4S28_12145 IPR012838 Pyruvate formate-lyase 1 activating enzyme M4S28_12145 IPR034465 Pyruvate formate-lyase activase M4S28_12145 IPR001989 Radical-activating enzyme, conserved site M4S28_12145 IPR007197 Radical SAM M4S28_12150 IPR005587 Uncharacterised protein family UPF0304, YfbU M4S28_12150 IPR023146 YfbU, alpha-helical bundle domain superfamily M4S28_12150 IPR023145 YfbU, helix-hairpin domain superfamily M4S28_12155 IPR010583 MltA-interacting MipA M4S28_12160 IPR013153 PrkA AAA domain M4S28_12160 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12160 IPR016230 Serine-protein kinase, PrkA M4S28_12160 IPR010650 PrkA C-terminal domain M4S28_12165 IPR006698 Uncharacterised protein family UPF0229 M4S28_12170 IPR007390 Sporulation stage V, protein R M4S28_12175 IPR029045 ClpP/crotonase-like domain superfamily M4S28_12175 IPR002142 Peptidase S49 M4S28_12175 IPR013703 Peptidase S49, N-terminal proteobacteria M4S28_12180 IPR036291 NAD(P)-binding domain superfamily M4S28_12180 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_12180 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_12185 IPR003593 AAA+ ATPase domain M4S28_12185 IPR013765 DNA recombination and repair protein RecA M4S28_12185 IPR020584 DNA recombination/repair protein RecA, conserved site M4S28_12185 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12185 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M4S28_12185 IPR023400 DNA recombination and repair protein RecA, C-terminal M4S28_12185 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface M4S28_12195 IPR004805 DNA polymerase III, alpha subunit M4S28_12195 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_12195 IPR004013 PHP domain M4S28_12195 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M4S28_12195 IPR029460 DNA polymerase, helix-hairpin-helix motif M4S28_12195 IPR023073 DNA polymerase, error-prone M4S28_12195 IPR040982 DNA polymerase III alpha subunit finger domain M4S28_12195 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M4S28_12200 IPR024181 Chemotaxis response regulator CheV M4S28_12200 IPR036061 CheW-like domain superfamily M4S28_12200 IPR001789 Signal transduction response regulator, receiver domain M4S28_12200 IPR011006 CheY-like superfamily M4S28_12200 IPR002545 CheW-like domain M4S28_12205 IPR036390 Winged helix DNA-binding domain superfamily M4S28_12205 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_12205 IPR000600 ROK family M4S28_12210 IPR040442 Pyruvate kinase-like domain superfamily M4S28_12210 IPR011037 Pyruvate kinase-like, insert domain superfamily M4S28_12210 IPR018209 Pyruvate kinase, active site M4S28_12210 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_12210 IPR001697 Pyruvate kinase M4S28_12210 IPR015795 Pyruvate kinase, C-terminal M4S28_12210 IPR015806 Pyruvate kinase, insert domain superfamily M4S28_12210 IPR015793 Pyruvate kinase, barrel M4S28_12210 IPR036918 Pyruvate kinase, C-terminal domain superfamily M4S28_12215 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_12215 IPR002641 Patatin-like phospholipase domain M4S28_12215 IPR037483 YjjU-like M4S28_12235 IPR036878 Glucose permease domain IIB M4S28_12235 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M4S28_12235 IPR003352 Phosphotransferase system, EIIC M4S28_12235 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M4S28_12235 IPR001996 Phosphotransferase system, IIB component, type 1 M4S28_12235 IPR013013 Phosphotransferase system, EIIC component, type 1 M4S28_12235 IPR011299 PTS system glucose-specific IIBC component M4S28_12240 IPR018228 Deoxyribonuclease, TatD-related, conserved site M4S28_12240 IPR015991 Uncharacterised hydrolase TatD-type M4S28_12240 IPR032466 Metal-dependent hydrolase M4S28_12240 IPR001130 TatD family M4S28_12245 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12245 IPR015199 DNA polymerase III, delta subunit, C-terminal M4S28_12245 IPR004622 DNA polymerase III, delta prime subunit M4S28_12250 IPR018094 Thymidylate kinase M4S28_12250 IPR018095 Thymidylate kinase, conserved site M4S28_12250 IPR039430 Thymidylate kinase-like domain M4S28_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12255 IPR003770 Endolytic murein transglycosylase M4S28_12260 IPR036038 Aminotransferase-like, PLP-dependent enzymes M4S28_12260 IPR018300 Aminotransferase, class IV, conserved site M4S28_12260 IPR001544 Aminotransferase class IV M4S28_12260 IPR017824 Aminodeoxychorismate lyase, class IV M4S28_12265 IPR000794 Beta-ketoacyl synthase M4S28_12265 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 M4S28_12265 IPR016039 Thiolase-like M4S28_12265 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_12265 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_12265 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_12265 IPR018201 Beta-ketoacyl synthase, active site M4S28_12270 IPR003231 Acyl carrier protein (ACP) M4S28_12270 IPR036736 ACP-like superfamily M4S28_12270 IPR006162 Phosphopantetheine attachment site M4S28_12270 IPR009081 Phosphopantetheine binding ACP domain M4S28_12275 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_12275 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_12275 IPR036291 NAD(P)-binding domain superfamily M4S28_12275 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase M4S28_12280 IPR001227 Acyl transferase domain superfamily M4S28_12280 IPR014043 Acyl transferase M4S28_12280 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_12280 IPR024925 Malonyl CoA-acyl carrier protein transacylase M4S28_12280 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type M4S28_12280 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M4S28_12285 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M4S28_12285 IPR016039 Thiolase-like M4S28_12285 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal M4S28_12285 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 M4S28_12290 IPR003664 Fatty acid synthesis PlsX protein M4S28_12290 IPR012281 Phospholipid biosynthesis protein, PlsX-like M4S28_12295 IPR011332 Zinc-binding ribosomal protein M4S28_12295 IPR002677 Ribosomal protein L32p M4S28_12300 IPR003772 Large ribosomal RNA subunit accumulation protein YceD M4S28_12300 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria M4S28_12305 IPR029001 Inosine triphosphate pyrophosphatase-like M4S28_12305 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein M4S28_12310 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_12310 IPR006225 Pseudouridine synthase, RluC/RluD M4S28_12310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_12310 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_12310 IPR002942 RNA-binding S4 domain M4S28_12310 IPR036986 RNA-binding S4 domain superfamily M4S28_12315 IPR021968 Polyribonucleotide phosphorylase C-terminal M4S28_12315 IPR003029 S1 domain M4S28_12315 IPR022967 RNA-binding domain, S1 M4S28_12315 IPR004659 Ribonuclease E/G M4S28_12315 IPR012340 Nucleic acid-binding, OB-fold M4S28_12315 IPR028878 Ribonuclease E M4S28_12315 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G M4S28_12320 IPR011547 SLC26A/SulP transporter domain M4S28_12320 IPR036513 STAS domain superfamily M4S28_12320 IPR002645 STAS domain M4S28_12320 IPR001902 SLC26A/SulP transporter M4S28_12320 IPR018045 Sulphate anion transporter, conserved site M4S28_12330 IPR023485 Phosphotyrosine protein phosphatase I M4S28_12330 IPR036196 Phosphotyrosine protein phosphatase I superfamily M4S28_12330 IPR017867 Protein-tyrosine phosphatase, low molecular weight M4S28_12335 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR M4S28_12335 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain M4S28_12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12340 IPR007844 AsmA M4S28_12345 IPR000764 Uridine kinase-like M4S28_12345 IPR006083 Phosphoribulokinase/uridine kinase M4S28_12345 IPR026008 Uridine kinase M4S28_12345 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12350 IPR034904 Fe-S cluster assembly domain superfamily M4S28_12350 IPR019591 Mrp/NBP35 ATP-binding protein M4S28_12350 IPR000808 Mrp, conserved site M4S28_12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12350 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M4S28_12355 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_12355 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain M4S28_12355 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal M4S28_12355 IPR023458 Methionine-tRNA ligase, type 1 M4S28_12355 IPR014758 Methionyl-tRNA synthetase M4S28_12355 IPR015413 Methionyl/Leucyl tRNA synthetase M4S28_12355 IPR033911 Methioninyl-tRNA synthetase core domain M4S28_12355 IPR012340 Nucleic acid-binding, OB-fold M4S28_12355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_12355 IPR002547 tRNA-binding domain M4S28_12355 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_12355 IPR029038 Methionyl-tRNA synthetase, Zn-domain M4S28_12365 IPR014178 Fatty acid response transcription factor FadR M4S28_12365 IPR028374 FadR, C-terminal domain M4S28_12365 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_12365 IPR000524 Transcription regulator HTH, GntR M4S28_12365 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_12365 IPR036390 Winged helix DNA-binding domain superfamily M4S28_12370 IPR004671 Na+/H+ antiporter NhaB M4S28_12375 IPR003752 Disulphide bond formation protein DsbB/BdbC M4S28_12375 IPR023380 DsbB-like superfamily M4S28_12375 IPR022920 Disulphide bond formation protein DsbB M4S28_12380 IPR004027 SEC-C motif M4S28_12380 IPR000185 Protein translocase subunit SecA M4S28_12380 IPR020937 SecA conserved site M4S28_12380 IPR011115 SecA DEAD-like, N-terminal M4S28_12380 IPR014018 SecA motor DEAD M4S28_12380 IPR011130 SecA, preprotein cross-linking domain M4S28_12380 IPR011116 SecA Wing/Scaffold M4S28_12380 IPR036266 SecA, Wing/Scaffold superfamily M4S28_12380 IPR036670 SecA, preprotein cross-linking domain superfamily M4S28_12380 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12385 IPR010054 General secretion pathway protein G M4S28_12385 IPR013545 Type II secretion system protein G M4S28_12385 IPR000983 Bacterial general secretion pathway protein G-type pilin M4S28_12385 IPR012902 Prokaryotic N-terminal methylation site M4S28_12390 IPR013785 Aldolase-type TIM barrel M4S28_12390 IPR035587 DUS-like, FMN-binding domain M4S28_12390 IPR032886 tRNA-dihydrouridine(16) synthase M4S28_12390 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal M4S28_12390 IPR001269 tRNA-dihydrouridine synthase M4S28_12390 IPR018517 tRNA-dihydrouridine synthase, conserved site M4S28_12395 IPR007894 MASE2 M4S28_12395 IPR029787 Nucleotide cyclase M4S28_12395 IPR000160 GGDEF domain M4S28_12400 IPR017069 Maltodextrin glucosidase M4S28_12400 IPR017853 Glycoside hydrolase superfamily M4S28_12400 IPR013780 Glycosyl hydrolase, all-beta M4S28_12400 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_12400 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain M4S28_12400 IPR014756 Immunoglobulin E-set M4S28_12410 IPR007334 Uncharacterised protein family UPF0208 M4S28_12415 IPR023865 Aliphatic acid kinase, short-chain, conserved site M4S28_12415 IPR004372 Acetate/propionate kinase M4S28_12415 IPR000890 Aliphatic acid kinase, short-chain M4S28_12420 IPR016475 Phosphate acetyltransferase, bacteria M4S28_12420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12420 IPR004614 Phosphate acetyltransferase M4S28_12420 IPR042113 Phosphate acetyltransferase, domain 1 M4S28_12420 IPR042112 Phosphate acetyltransferase, domain 2 M4S28_12420 IPR002505 Phosphate acetyl/butaryl transferase M4S28_12420 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M4S28_12420 IPR010766 DRTGG M4S28_12425 IPR036249 Thioredoxin-like superfamily M4S28_12425 IPR004045 Glutathione S-transferase, N-terminal M4S28_12425 IPR040079 Glutathione Transferase family M4S28_12425 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_12425 IPR016639 Glutathione S-transferase Omega/GSH M4S28_12425 IPR010987 Glutathione S-transferase, C-terminal-like M4S28_12430 IPR003593 AAA+ ATPase domain M4S28_12430 IPR003439 ABC transporter-like M4S28_12430 IPR017871 ABC transporter, conserved site M4S28_12430 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_12430 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12435 IPR003593 AAA+ ATPase domain M4S28_12435 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12435 IPR003439 ABC transporter-like M4S28_12435 IPR017871 ABC transporter, conserved site M4S28_12440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_12440 IPR035906 MetI-like superfamily M4S28_12440 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M4S28_12445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_12445 IPR035906 MetI-like superfamily M4S28_12450 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_12450 IPR039424 Solute-binding protein family 5 M4S28_12450 IPR023765 Solute-binding protein family 5, conserved site M4S28_12450 IPR000914 Solute-binding protein family 5 domain M4S28_12455 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily M4S28_12455 IPR003448 Molybdopterin biosynthesis MoaE M4S28_12460 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M4S28_12460 IPR003749 Sulfur carrier ThiS/MoaD-like M4S28_12460 IPR012675 Beta-grasp domain superfamily M4S28_12465 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain M4S28_12465 IPR023045 Molybdenum cofactor biosynthesis C M4S28_12465 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily M4S28_12470 IPR012245 Molybdenum cofactor biosynthesis protein MoaB M4S28_12470 IPR036425 MoaB/Mog-like domain superfamily M4S28_12470 IPR001453 MoaB/Mog domain M4S28_12470 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria M4S28_12470 IPR008284 Molybdenum cofactor biosynthesis, conserved site M4S28_12475 IPR006638 Elp3/MiaB/NifB M4S28_12475 IPR013785 Aldolase-type TIM barrel M4S28_12475 IPR013483 Molybdenum cofactor biosynthesis protein A M4S28_12475 IPR010505 Molybdenum cofactor synthesis C-terminal M4S28_12475 IPR007197 Radical SAM M4S28_12480 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 M4S28_12480 IPR010119 Gluconeogenesis factor M4S28_12480 IPR038136 Gluconeogenesis factor superfamily M4S28_12485 IPR036641 HPT domain superfamily M4S28_12485 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_12490 IPR025944 Sigma-54 interaction domain, conserved site M4S28_12490 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_12490 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12490 IPR001789 Signal transduction response regulator, receiver domain M4S28_12490 IPR002197 DNA binding HTH domain, Fis-type M4S28_12490 IPR009057 Homeobox-like domain superfamily M4S28_12490 IPR011006 CheY-like superfamily M4S28_12490 IPR003593 AAA+ ATPase domain M4S28_12490 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_12495 IPR024759 UvrB, YAD/RRR-motif-containing domain M4S28_12495 IPR041471 UvrB, interaction domain M4S28_12495 IPR006935 Helicase/UvrB, N-terminal M4S28_12495 IPR036876 UVR domain superfamily M4S28_12495 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_12495 IPR004807 UvrABC system, subunit B M4S28_12495 IPR001650 Helicase, C-terminal M4S28_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12495 IPR001943 UVR domain M4S28_12510 IPR003667 NqrDE/RnfAE M4S28_12510 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA M4S28_12515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_12515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_12515 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB M4S28_12515 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria M4S28_12515 IPR007202 4Fe-4S domain M4S28_12520 IPR026902 RnfC Barrel sandwich hybrid domain M4S28_12520 IPR019554 Soluble ligand binding domain M4S28_12520 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain M4S28_12520 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC M4S28_12520 IPR009051 Alpha-helical ferredoxin M4S28_12520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_12520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_12520 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily M4S28_12525 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD M4S28_12525 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D M4S28_12530 IPR007329 FMN-binding M4S28_12530 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG M4S28_12535 IPR003667 NqrDE/RnfAE M4S28_12535 IPR010968 Ion-translocating oxidoreductase complex subunit E M4S28_12540 IPR005759 Endonuclease III M4S28_12540 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M4S28_12540 IPR003265 HhH-GPD domain M4S28_12540 IPR004035 Endonuclease III, iron-sulphur binding site M4S28_12540 IPR011257 DNA glycosylase M4S28_12540 IPR004036 Endonuclease III-like, conserved site-2 M4S28_12540 IPR000445 Helix-hairpin-helix motif M4S28_12540 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M4S28_12545 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_12545 IPR004361 Glyoxalase I M4S28_12545 IPR018146 Glyoxalase I, conserved site M4S28_12545 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_12545 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_12550 IPR020206 Uncharacterised protein family, VP2110 M4S28_12555 IPR036737 OmpA-like domain superfamily M4S28_12555 IPR006665 OmpA-like domain M4S28_12555 IPR041544 MotY N-terminal domain M4S28_12555 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_12560 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_12560 IPR005987 Ribonuclease T M4S28_12560 IPR012337 Ribonuclease H-like superfamily M4S28_12560 IPR036397 Ribonuclease H superfamily M4S28_12565 IPR032813 Putative Na+/H+ antiporter, N-terminal M4S28_12565 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M4S28_12575 IPR014434 Monothiol glutaredoxin M4S28_12575 IPR002109 Glutaredoxin M4S28_12575 IPR033658 Glutaredoxin, PICOT-like M4S28_12575 IPR004480 Monothiol glutaredoxin-related M4S28_12575 IPR036249 Thioredoxin-like superfamily M4S28_12580 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily M4S28_12580 IPR019833 Manganese/iron superoxide dismutase, binding site M4S28_12580 IPR019832 Manganese/iron superoxide dismutase, C-terminal M4S28_12580 IPR001189 Manganese/iron superoxide dismutase M4S28_12580 IPR019831 Manganese/iron superoxide dismutase, N-terminal M4S28_12580 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily M4S28_12595 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_12595 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase M4S28_12595 IPR039697 Iron-type alcohol dehydrogenase-like M4S28_12595 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M4S28_12595 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M4S28_12595 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain M4S28_12595 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_12595 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_12595 IPR015590 Aldehyde dehydrogenase domain M4S28_12600 IPR002771 Multiple antibiotic resistance (MarC)-related M4S28_12605 IPR018488 Cyclic nucleotide-binding, conserved site M4S28_12605 IPR000595 Cyclic nucleotide-binding domain M4S28_12605 IPR005821 Ion transport domain M4S28_12605 IPR014710 RmlC-like jelly roll fold M4S28_12605 IPR028325 Voltage-gated potassium channel M4S28_12605 IPR018490 Cyclic nucleotide-binding-like M4S28_12610 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M4S28_12610 IPR000534 Semialdehyde dehydrogenase, NAD-binding M4S28_12610 IPR036291 NAD(P)-binding domain superfamily M4S28_12610 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type M4S28_12610 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site M4S28_12610 IPR012080 Aspartate-semialdehyde dehydrogenase M4S28_12615 IPR004770 Na+/H+ antiporter NhaC M4S28_12615 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal M4S28_12630 IPR007358 Nucleoid-associated protein NdpA M4S28_12635 IPR009857 Uncharacterised protein family UPF0352 M4S28_12635 IPR023202 YejL-like superfamily M4S28_12640 IPR024588 Inner membrane protein YejM, N-terminal M4S28_12640 IPR012159 Inner membrane protein YejM M4S28_12640 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_12640 IPR000917 Sulfatase, N-terminal M4S28_12655 IPR030489 Transcription regulator Rrf2-type, conserved site M4S28_12655 IPR000944 Transcription regulator Rrf2-type M4S28_12655 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_12655 IPR036390 Winged helix DNA-binding domain superfamily M4S28_12665 IPR000286 Histone deacetylase family M4S28_12665 IPR023801 Histone deacetylase domain M4S28_12665 IPR037138 Histone deacetylase domain superfamily M4S28_12665 IPR023696 Ureohydrolase domain superfamily M4S28_12670 IPR036291 NAD(P)-binding domain superfamily M4S28_12670 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_12680 IPR034144 DNA topoisomerase 3-like, TOPRIM domain M4S28_12680 IPR006171 TOPRIM domain M4S28_12680 IPR003602 DNA topoisomerase, type IA, DNA-binding domain M4S28_12680 IPR023405 DNA topoisomerase, type IA, core domain M4S28_12680 IPR005738 DNA topoisomerase III M4S28_12680 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M4S28_12680 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M4S28_12680 IPR000380 DNA topoisomerase, type IA M4S28_12680 IPR013497 DNA topoisomerase, type IA, central M4S28_12680 IPR023406 DNA topoisomerase, type IA, active site M4S28_12680 IPR003601 DNA topoisomerase, type IA, domain 2 M4S28_12680 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M4S28_12685 IPR029479 Nitroreductase M4S28_12685 IPR000415 Nitroreductase-like M4S28_12685 IPR026021 Putative NAD(P)H nitroreductase YdjA-like M4S28_12690 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M4S28_12690 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_12690 IPR013785 Aldolase-type TIM barrel M4S28_12690 IPR023753 FAD/NAD(P)-binding domain M4S28_12695 IPR029045 ClpP/crotonase-like domain superfamily M4S28_12695 IPR004634 Peptidase S49, protease IV M4S28_12695 IPR004635 Peptidase S49, SppA M4S28_12695 IPR002142 Peptidase S49 M4S28_12695 IPR033854 Signal peptide peptidase A M4S28_12700 IPR037152 L-asparaginase, N-terminal domain superfamily M4S28_12700 IPR041725 Type I (cytosolic) L-asparaginase M4S28_12700 IPR027474 L-asparaginase, N-terminal M4S28_12700 IPR027473 L-asparaginase, C-terminal M4S28_12700 IPR036152 Asparaginase/glutaminase-like superfamily M4S28_12700 IPR027475 Asparaginase/glutaminase, active site 2 M4S28_12700 IPR020827 Asparaginase/glutaminase, active site 1 M4S28_12700 IPR006034 Asparaginase/glutaminase-like M4S28_12700 IPR040919 Asparaginase/glutaminase, C-terminal M4S28_12700 IPR006033 Type I L-asparaginase family M4S28_12705 IPR009749 Protein of unknown function DUF1315 M4S28_12715 IPR028427 Peptide methionine sulfoxide reductase M4S28_12715 IPR002579 Peptide methionine sulphoxide reductase MrsB M4S28_12715 IPR011057 Mss4-like superfamily M4S28_12720 IPR036291 NAD(P)-binding domain superfamily M4S28_12720 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M4S28_12720 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M4S28_12720 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M4S28_12720 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M4S28_12720 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M4S28_12725 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase M4S28_12725 IPR025532 Glucose-6-phosphate 1-epimerase M4S28_12725 IPR011013 Galactose mutarotase-like domain superfamily M4S28_12725 IPR014718 Glycoside hydrolase-type carbohydrate-binding M4S28_12730 IPR004090 Chemotaxis methyl-accepting receptor M4S28_12730 IPR013655 PAS fold-3 M4S28_12730 IPR035965 PAS domain superfamily M4S28_12730 IPR000700 PAS-associated, C-terminal M4S28_12730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_12730 IPR001610 PAC motif M4S28_12730 IPR000014 PAS domain M4S28_12735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_12735 IPR025714 Methyltransferase domain M4S28_12735 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted M4S28_12750 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT M4S28_12750 IPR018093 BCCT transporter, conserved site M4S28_12750 IPR000060 BCCT transporter family M4S28_12755 IPR001952 Alkaline phosphatase M4S28_12755 IPR018299 Alkaline phosphatase, active site M4S28_12755 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_12765 IPR018146 Glyoxalase I, conserved site M4S28_12765 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_12765 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_12765 IPR004361 Glyoxalase I M4S28_12765 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_12775 IPR005358 Putative zinc- or iron-chelating domain containing protein M4S28_12775 IPR008228 Uncharacterised conserved protein UCP006173 M4S28_12780 IPR005358 Putative zinc- or iron-chelating domain containing protein M4S28_12785 IPR000425 Major intrinsic protein M4S28_12785 IPR023743 Aquaporin Z M4S28_12785 IPR034294 Aquaporin transporter M4S28_12785 IPR023271 Aquaporin-like M4S28_12785 IPR022357 Major intrinsic protein, conserved site M4S28_12790 IPR006171 TOPRIM domain M4S28_12790 IPR034137 RecR, TOPRIM domain M4S28_12790 IPR015967 Recombination protein RecR, conserved site M4S28_12790 IPR023628 Recombination protein RecR, C4-type zinc finger M4S28_12790 IPR023627 Recombination protein RecR M4S28_12790 IPR000093 DNA recombination protein RecR M4S28_12795 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M4S28_12795 IPR004401 Nucleoid-associated protein YbaB/EbfC family M4S28_12800 IPR022754 DNA polymerase III, gamma subunit, domain III M4S28_12800 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12800 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily M4S28_12800 IPR012763 DNA polymerase III, subunit gamma/ tau M4S28_12800 IPR021029 DNA polymerase III, tau subunit, domain V M4S28_12800 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV M4S28_12800 IPR001270 ClpA/B family M4S28_12800 IPR003593 AAA+ ATPase domain M4S28_12800 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal M4S28_12805 IPR005764 Adenine phosphoribosyl transferase M4S28_12805 IPR000836 Phosphoribosyltransferase domain M4S28_12805 IPR029057 Phosphoribosyltransferase-like M4S28_12810 IPR007401 Protein of unknown function DUF454 M4S28_12815 IPR028616 Regulator of RpoS M4S28_12815 IPR011006 CheY-like superfamily M4S28_12815 IPR001789 Signal transduction response regulator, receiver domain M4S28_12815 IPR039420 Transcriptional regulatory protein WalR-like M4S28_12815 IPR036457 PPM-type phosphatase domain superfamily M4S28_12820 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_12820 IPR005119 LysR, substrate-binding M4S28_12820 IPR036390 Winged helix DNA-binding domain superfamily M4S28_12820 IPR000847 Transcription regulator HTH, LysR M4S28_12825 IPR017932 Glutamine amidotransferase type 2 domain M4S28_12825 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_12825 IPR000836 Phosphoribosyltransferase domain M4S28_12825 IPR029057 Phosphoribosyltransferase-like M4S28_12825 IPR005854 Amidophosphoribosyltransferase M4S28_12825 IPR035584 Amidophosphoribosyltransferase, N-terminal M4S28_12830 IPR003825 Colicin V production, CvpA M4S28_12835 IPR032898 Cell division protein DedD M4S28_12835 IPR007730 Sporulation-like domain M4S28_12835 IPR036680 Sporulation-like domain superfamily M4S28_12840 IPR013221 Mur ligase, central M4S28_12840 IPR004101 Mur ligase, C-terminal M4S28_12840 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_12840 IPR018109 Folylpolyglutamate synthetase, conserved site M4S28_12840 IPR001645 Folylpolyglutamate synthetase M4S28_12840 IPR036565 Mur-like, catalytic domain superfamily M4S28_12845 IPR034733 Acetyl-CoA carboxylase M4S28_12845 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit M4S28_12845 IPR029045 ClpP/crotonase-like domain superfamily M4S28_12845 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal M4S28_12845 IPR041010 Acetyl-coA carboxylase zinc finger domain M4S28_12850 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_12850 IPR001406 Pseudouridine synthase I, TruA M4S28_12850 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain M4S28_12850 IPR020095 Pseudouridine synthase I, TruA, C-terminal M4S28_12855 IPR020012 Motility protein FimV, N-terminal M4S28_12855 IPR020011 Motility protein FimV, C-terminal M4S28_12855 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_12855 IPR018392 LysM domain M4S28_12855 IPR038440 FimV, C-terminal domain superfamily M4S28_12855 IPR036779 LysM domain superfamily M4S28_12860 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site M4S28_12860 IPR012080 Aspartate-semialdehyde dehydrogenase M4S28_12860 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type M4S28_12860 IPR036291 NAD(P)-binding domain superfamily M4S28_12860 IPR000534 Semialdehyde dehydrogenase, NAD-binding M4S28_12860 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M4S28_12865 IPR038251 PdxB, dimerisation domain superfamily M4S28_12865 IPR036291 NAD(P)-binding domain superfamily M4S28_12865 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain M4S28_12865 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M4S28_12865 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M4S28_12865 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M4S28_12865 IPR020921 Erythronate-4-phosphate dehydrogenase M4S28_12870 IPR016039 Thiolase-like M4S28_12870 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_12870 IPR000794 Beta-ketoacyl synthase M4S28_12870 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_12870 IPR018201 Beta-ketoacyl synthase, active site M4S28_12870 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_12875 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal M4S28_12875 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC M4S28_12875 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_12875 IPR006076 FAD dependent oxidoreductase M4S28_12875 IPR008471 MnmC-like methyltransferase M4S28_12880 IPR029039 Flavoprotein-like superfamily M4S28_12880 IPR005025 NADPH-dependent FMN reductase-like M4S28_12885 IPR014987 Uncharacterised protein family YfcL M4S28_12890 IPR007411 Elongation factor P hydroxylase M4S28_12895 IPR005115 Uncharacterised domain UPF0126 M4S28_12900 IPR035904 Chorismate synthase AroC superfamily M4S28_12900 IPR000453 Chorismate synthase M4S28_12900 IPR020541 Chorismate synthase, conserved site M4S28_12915 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M4S28_12915 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site M4S28_12915 IPR036291 NAD(P)-binding domain superfamily M4S28_12915 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase M4S28_12915 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M4S28_12925 IPR008276 Concentrative nucleoside transporter M4S28_12925 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M4S28_12925 IPR011657 Concentrative nucleoside transporter C-terminal domain M4S28_12925 IPR002668 Concentrative nucleoside transporter N-terminal domain M4S28_12925 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_12930 IPR005119 LysR, substrate-binding M4S28_12930 IPR000847 Transcription regulator HTH, LysR M4S28_12930 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_12930 IPR036390 Winged helix DNA-binding domain superfamily M4S28_12935 IPR031304 Transglycosylase SLT domain 2 M4S28_12935 IPR011757 Lytic transglycosylase MltB M4S28_12935 IPR023346 Lysozyme-like domain superfamily M4S28_12940 IPR038068 YcgL-like superfamily M4S28_12940 IPR027354 YcgL domain M4S28_12945 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal M4S28_12945 IPR013033 Septum formation inhibitor MinC M4S28_12945 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily M4S28_12945 IPR007874 Septum formation inhibitor MinC, N-terminal M4S28_12945 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily M4S28_12945 IPR005526 Septum formation inhibitor MinC, C-terminal M4S28_12950 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12950 IPR010223 ATP binding protein MinD, bacterial-type M4S28_12950 IPR025501 ATP binding protein MinD M4S28_12950 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M4S28_12955 IPR005527 Cell division topological specificity factor MinE M4S28_12955 IPR036707 Cell division topological specificity factor MinE superfamily M4S28_12960 IPR002562 3'-5' exonuclease domain M4S28_12960 IPR010997 HRDC-like superfamily M4S28_12960 IPR002121 HRDC domain M4S28_12960 IPR006292 Ribonuclease D M4S28_12960 IPR012337 Ribonuclease H-like superfamily M4S28_12960 IPR036397 Ribonuclease H superfamily M4S28_12965 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_12965 IPR020845 AMP-binding, conserved site M4S28_12965 IPR000873 AMP-dependent synthetase/ligase M4S28_12965 IPR042099 AMP-dependent synthetase-like superfamily M4S28_12970 IPR029058 Alpha/Beta hydrolase fold M4S28_12970 IPR000073 Alpha/beta hydrolase fold-1 M4S28_12970 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase M4S28_12985 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB M4S28_12985 IPR000905 Gcp-like domain M4S28_12990 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type M4S28_12990 IPR006935 Helicase/UvrB, N-terminal M4S28_12990 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_12990 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_12990 IPR006555 ATP-dependent helicase, C-terminal M4S28_13000 IPR002912 ACT domain M4S28_13000 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain M4S28_13000 IPR002376 Formyl transferase, N-terminal M4S28_13000 IPR036477 Formyl transferase, N-terminal domain superfamily M4S28_13000 IPR004810 Formyltetrahydrofolate deformylase M4S28_13005 IPR010393 Protein of unknown function DUF991 M4S28_13005 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_13010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_13010 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_13010 IPR008909 DALR anticodon binding M4S28_13010 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_13010 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily M4S28_13010 IPR005148 Arginyl tRNA synthetase N-terminal domain M4S28_13010 IPR001278 Arginine-tRNA ligase M4S28_13010 IPR035684 Arginyl-tRNA synthetase, catalytic core domain M4S28_13025 IPR003373 Ferrous iron transport protein B M4S28_13025 IPR011640 Ferrous iron transport protein B, C-terminal M4S28_13025 IPR030389 FeoB-type guanine nucleotide-binding (G) domain M4S28_13025 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_13025 IPR006073 GTP binding domain M4S28_13025 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_13030 IPR007167 Ferrous iron transporter FeoA domain M4S28_13030 IPR038157 Ferrous iron transporter, core domain M4S28_13030 IPR008988 Transcriptional repressor, C-terminal M4S28_13040 IPR018060 DNA binding HTH domain, AraC-type M4S28_13040 IPR009057 Homeobox-like domain superfamily M4S28_13040 IPR020449 Transcription regulator HTH, AraC- type M4S28_13045 IPR035520 High-affinity zinc uptake system protein ZnuA M4S28_13045 IPR006127 Periplasmic solute binding protein, ZnuA-like M4S28_13050 IPR003593 AAA+ ATPase domain M4S28_13050 IPR003439 ABC transporter-like M4S28_13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_13050 IPR017882 Zinc import ATP-binding protein ZnuC M4S28_13055 IPR037294 ABC transporter, BtuC-like M4S28_13055 IPR001626 ABC transporter, TroCD-like M4S28_13060 IPR016102 Succinyl-CoA synthetase-like M4S28_13060 IPR036291 NAD(P)-binding domain superfamily M4S28_13060 IPR003781 CoA-binding M4S28_13060 IPR005810 Succinyl-CoA ligase, alpha subunit M4S28_13060 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site M4S28_13060 IPR005811 ATP-citrate lyase/succinyl-CoA ligase M4S28_13060 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site M4S28_13065 IPR016102 Succinyl-CoA synthetase-like M4S28_13065 IPR005809 Succinate--CoA synthetase, beta subunit M4S28_13065 IPR013815 ATP-grasp fold, subdomain 1 M4S28_13065 IPR005811 ATP-citrate lyase/succinyl-CoA ligase M4S28_13065 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site M4S28_13065 IPR011761 ATP-grasp fold M4S28_13065 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type M4S28_13070 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M4S28_13070 IPR000089 Biotin/lipoyl attachment M4S28_13070 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M4S28_13070 IPR036625 E3-binding domain superfamily M4S28_13070 IPR004167 Peripheral subunit-binding domain M4S28_13070 IPR011053 Single hybrid motif M4S28_13070 IPR006255 Dihydrolipoamide succinyltransferase M4S28_13070 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M4S28_13075 IPR005475 Transketolase-like, pyrimidine-binding domain M4S28_13075 IPR029061 Thiamin diphosphate-binding fold M4S28_13075 IPR001017 Dehydrogenase, E1 component M4S28_13075 IPR011603 2-oxoglutarate dehydrogenase E1 component M4S28_13075 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain M4S28_13075 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal M4S28_13075 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily M4S28_13080 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_13080 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_13080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_13080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_13080 IPR012675 Beta-grasp domain superfamily M4S28_13080 IPR009051 Alpha-helical ferredoxin M4S28_13080 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein M4S28_13080 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal M4S28_13085 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M4S28_13085 IPR011281 Succinate dehydrogenase, flavoprotein subunit M4S28_13085 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit M4S28_13085 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site M4S28_13085 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M4S28_13085 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M4S28_13085 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_13085 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M4S28_13090 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M4S28_13090 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor M4S28_13090 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit M4S28_13095 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit M4S28_13095 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site M4S28_13095 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit M4S28_13095 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit M4S28_13100 IPR016142 Citrate synthase-like, large alpha subdomain M4S28_13100 IPR016143 Citrate synthase-like, small alpha subdomain M4S28_13100 IPR002020 Citrate synthase M4S28_13100 IPR019810 Citrate synthase active site M4S28_13100 IPR024176 Citrate synthase, bacterial-type M4S28_13100 IPR036969 Citrate synthase superfamily M4S28_13100 IPR010953 Citrate synthase, type I M4S28_13105 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M4S28_13105 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily M4S28_13115 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M4S28_13115 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M4S28_13115 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M4S28_13115 IPR005843 Alpha-D-phosphohexomutase, C-terminal M4S28_13115 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M4S28_13115 IPR016066 Alpha-D-phosphohexomutase, conserved site M4S28_13115 IPR005852 Phosphoglucomutase, alpha-D-glucose specific M4S28_13115 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M4S28_13120 IPR013321 Arc-type ribbon-helix-helix M4S28_13120 IPR010985 Ribbon-helix-helix M4S28_13120 IPR005621 Negative modulator of initiation of replication SeqA M4S28_13120 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain M4S28_13120 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily M4S28_13120 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal M4S28_13125 IPR000073 Alpha/beta hydrolase fold-1 M4S28_13125 IPR029058 Alpha/Beta hydrolase fold M4S28_13135 IPR029039 Flavoprotein-like superfamily M4S28_13135 IPR008254 Flavodoxin/nitric oxide synthase M4S28_13135 IPR001226 Flavodoxin, conserved site M4S28_13135 IPR010086 Flavodoxin, long chain M4S28_13145 IPR036390 Winged helix DNA-binding domain superfamily M4S28_13145 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_13145 IPR002481 Ferric-uptake regulator M4S28_13150 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M4S28_13150 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain M4S28_13150 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_13150 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M4S28_13150 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily M4S28_13150 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal M4S28_13150 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily M4S28_13150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_13150 IPR022861 Glutamine-tRNA ligase, bacterial M4S28_13150 IPR004514 Glutamine-tRNA synthetase M4S28_13155 IPR036878 Glucose permease domain IIB M4S28_13155 IPR013013 Phosphotransferase system, EIIC component, type 1 M4S28_13155 IPR003352 Phosphotransferase system, EIIC M4S28_13155 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component M4S28_13155 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M4S28_13155 IPR001996 Phosphotransferase system, IIB component, type 1 M4S28_13160 IPR006680 Amidohydrolase-related M4S28_13160 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_13160 IPR032466 Metal-dependent hydrolase M4S28_13160 IPR003764 N-acetylglucosamine-6-phosphate deacetylase M4S28_13165 IPR000835 MarR-type HTH domain M4S28_13165 IPR000600 ROK family M4S28_13165 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_13165 IPR036390 Winged helix DNA-binding domain superfamily M4S28_13170 IPR004771 K+/H+ exchanger M4S28_13170 IPR038770 Sodium/solute symporter superfamily M4S28_13170 IPR036291 NAD(P)-binding domain superfamily M4S28_13170 IPR003148 Regulator of K+ conductance, N-terminal M4S28_13170 IPR006153 Cation/H+ exchanger M4S28_13175 IPR006426 Asparagine synthase, glutamine-hydrolyzing M4S28_13175 IPR001962 Asparagine synthase M4S28_13175 IPR017932 Glutamine amidotransferase type 2 domain M4S28_13175 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_13175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_13175 IPR033738 Asparagine synthase, N-terminal domain M4S28_13180 IPR036735 NusG, N-terminal domain superfamily M4S28_13180 IPR010215 Transcription antitermination protein RfaH M4S28_13180 IPR006645 NusG, N-terminal M4S28_13190 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site M4S28_13190 IPR000109 Proton-dependent oligopeptide transporter family M4S28_13190 IPR036259 MFS transporter superfamily M4S28_13190 IPR020846 Major facilitator superfamily domain M4S28_13190 IPR005279 Dipeptide/tripeptide permease M4S28_13195 IPR033659 Ferrochelatase, N-terminal M4S28_13195 IPR019772 Ferrochelatase, active site M4S28_13195 IPR001015 Ferrochelatase M4S28_13195 IPR033644 Ferrochelatase, C-terminal M4S28_13200 IPR000850 Adenylate kinase/UMP-CMP kinase M4S28_13200 IPR006259 Adenylate kinase subfamily M4S28_13200 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_13200 IPR007862 Adenylate kinase, active site lid domain M4S28_13200 IPR033690 Adenylate kinase, conserved site M4S28_13205 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_13205 IPR019805 Heat shock protein Hsp90, conserved site M4S28_13205 IPR037196 HSP90, C-terminal domain M4S28_13205 IPR001404 Heat shock protein Hsp90 family M4S28_13205 IPR020575 Heat shock protein Hsp90, N-terminal M4S28_13205 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_13205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_13210 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_13210 IPR039420 Transcriptional regulatory protein WalR-like M4S28_13210 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_13210 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_13215 IPR035288 Trans-membrane regulatory protein ToxS M4S28_13225 IPR020935 Phosphodiesterase YfcE, conserved site M4S28_13225 IPR029052 Metallo-dependent phosphatase-like M4S28_13225 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type M4S28_13225 IPR000979 Phosphodiesterase MJ0936/Vps29 M4S28_13225 IPR041802 YfcE-like, metallophosphatase domain M4S28_13240 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B M4S28_13245 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B M4S28_13250 IPR010099 Epimerase family protein SDR39U1 M4S28_13250 IPR036291 NAD(P)-binding domain superfamily M4S28_13250 IPR001509 NAD-dependent epimerase/dehydratase M4S28_13250 IPR013549 Domain of unknown function DUF1731 M4S28_13255 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_13255 IPR036291 NAD(P)-binding domain superfamily M4S28_13255 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_13260 IPR036249 Thioredoxin-like superfamily M4S28_13260 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_13260 IPR013766 Thioredoxin domain M4S28_13265 IPR001972 Stomatin family M4S28_13265 IPR032435 Band 7, C-terminal extension M4S28_13265 IPR018080 Band 7/stomatin-like, conserved site M4S28_13265 IPR001107 Band 7 domain M4S28_13265 IPR036013 Band 7/SPFH domain superfamily M4S28_13275 IPR011789 Cu(I)-responsive transcriptional regulator M4S28_13275 IPR000551 MerR-type HTH domain M4S28_13275 IPR009061 Putative DNA-binding domain superfamily M4S28_13285 IPR002299 Porin, Neisseria sp. type M4S28_13285 IPR001702 Porin, Gram-negative type M4S28_13285 IPR033900 Porin domain, Gram-negative type M4S28_13285 IPR023614 Porin domain superfamily M4S28_13290 IPR013840 NAD-dependent DNA ligase, N-terminal M4S28_13290 IPR012340 Nucleic acid-binding, OB-fold M4S28_13290 IPR004150 NAD-dependent DNA ligase, OB-fold M4S28_13290 IPR013839 NAD-dependent DNA ligase, adenylation M4S28_13290 IPR010994 RuvA domain 2-like M4S28_13290 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type M4S28_13290 IPR033136 NAD-dependent DNA ligase, conserved site M4S28_13290 IPR018239 NAD-dependent DNA ligase, active site M4S28_13290 IPR001679 NAD-dependent DNA ligase M4S28_13290 IPR036420 BRCT domain superfamily M4S28_13290 IPR001357 BRCT domain M4S28_13290 IPR041663 DisA/LigA, helix-hairpin-helix motif M4S28_13295 IPR007449 ZipA, C-terminal FtsZ-binding domain M4S28_13295 IPR011919 Cell division protein ZipA M4S28_13295 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily M4S28_13300 IPR022985 Sulfate transporter CysZ M4S28_13305 IPR005859 Cysteine synthase CysK M4S28_13305 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_13305 IPR005856 Cysteine synthase M4S28_13305 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_13305 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site M4S28_13310 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M4S28_13310 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M4S28_13310 IPR035895 HPr-like superfamily M4S28_13310 IPR000032 Phosphocarrier protein HPr-like M4S28_13315 IPR006318 Phosphotransferase system, enzyme I-like M4S28_13315 IPR036637 Phosphohistidine domain superfamily M4S28_13315 IPR040442 Pyruvate kinase-like domain superfamily M4S28_13315 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_13315 IPR024692 Phosphotransferase system, enzyme I M4S28_13315 IPR036618 PtsI, HPr-binding domain superfamily M4S28_13315 IPR008731 Phosphotransferase system, enzyme I N-terminal M4S28_13315 IPR023151 PEP-utilising enzyme, conserved site M4S28_13315 IPR008279 PEP-utilising enzyme, mobile domain M4S28_13315 IPR018274 PEP-utilising enzyme, active site M4S28_13315 IPR000121 PEP-utilising enzyme, C-terminal M4S28_13320 IPR011055 Duplicated hybrid motif M4S28_13320 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M4S28_13325 IPR010810 Flagellin hook, IN motif M4S28_13325 IPR001029 Flagellin, D0/D1 domain M4S28_13325 IPR042187 Flagellin, C-terminal domain, subdomain 2 M4S28_13325 IPR001492 Flagellin M4S28_13330 IPR010810 Flagellin hook, IN motif M4S28_13330 IPR001029 Flagellin, D0/D1 domain M4S28_13330 IPR042187 Flagellin, C-terminal domain, subdomain 2 M4S28_13330 IPR001492 Flagellin M4S28_13335 IPR011008 Dimeric alpha-beta barrel M4S28_13335 IPR006314 Dyp-type peroxidase M4S28_13340 IPR021318 Protein of unknown function DUF2919 M4S28_13360 IPR006504 Transcriptional regulator Spx/MgsR M4S28_13360 IPR006660 Arsenate reductase-like M4S28_13360 IPR036249 Thioredoxin-like superfamily M4S28_13365 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria M4S28_13365 IPR011650 Peptidase M20, dimerisation domain M4S28_13365 IPR036264 Bacterial exopeptidase dimerisation domain M4S28_13365 IPR002933 Peptidase M20 M4S28_13365 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M4S28_13380 IPR014524 Outer membrane protein assembly factor BamC M4S28_13380 IPR042268 Outer membrane protein assembly factor BamC, C-terminal M4S28_13380 IPR010653 NlpB/DapX lipoprotein M4S28_13385 IPR020625 Schiff base-forming aldolase, active site M4S28_13385 IPR013785 Aldolase-type TIM barrel M4S28_13385 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA M4S28_13385 IPR002220 DapA-like M4S28_13385 IPR020624 Schiff base-forming aldolase, conserved site M4S28_13390 IPR002912 ACT domain M4S28_13390 IPR016867 Glycine cleavage system transcriptional repressor M4S28_13395 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant M4S28_13395 IPR013766 Thioredoxin domain M4S28_13395 IPR036249 Thioredoxin-like superfamily M4S28_13395 IPR024706 Peroxiredoxin, AhpC-type M4S28_13400 IPR002549 Transmembrane protein TqsA-like M4S28_13410 IPR030873 Beta-barrel assembly-enhancing protease M4S28_13410 IPR001915 Peptidase M48 M4S28_13410 IPR019734 Tetratricopeptide repeat M4S28_13410 IPR013026 Tetratricopeptide repeat-containing domain M4S28_13410 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_13415 IPR006659 Arsenate reductase M4S28_13415 IPR006660 Arsenate reductase-like M4S28_13415 IPR036249 Thioredoxin-like superfamily M4S28_13420 IPR001226 Flavodoxin, conserved site M4S28_13420 IPR008254 Flavodoxin/nitric oxide synthase M4S28_13420 IPR029039 Flavoprotein-like superfamily M4S28_13420 IPR010089 Flavoprotein WrbA-like M4S28_13420 IPR005025 NADPH-dependent FMN reductase-like M4S28_13435 IPR006043 Xanthine/uracil/vitamin C permease M4S28_13435 IPR006042 Xanthine/uracil permease M4S28_13435 IPR029935 Uracil permease M4S28_13440 IPR034332 Uracil phosphoribosyltransferase, bacterial-type M4S28_13440 IPR029057 Phosphoribosyltransferase-like M4S28_13440 IPR000836 Phosphoribosyltransferase domain M4S28_13440 IPR005765 Uracil phosphoribosyl transferase M4S28_13445 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase M4S28_13445 IPR036921 PurM-like, N-terminal domain superfamily M4S28_13445 IPR016188 PurM-like, N-terminal domain M4S28_13445 IPR036676 PurM-like, C-terminal domain superfamily M4S28_13445 IPR010918 PurM-like, C-terminal domain M4S28_13450 IPR036477 Formyl transferase, N-terminal domain superfamily M4S28_13450 IPR002376 Formyl transferase, N-terminal M4S28_13450 IPR001555 Phosphoribosylglycinamide formyltransferase, active site M4S28_13450 IPR004607 Phosphoribosylglycinamide formyltransferase M4S28_13455 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_13455 IPR026869 Putative glutamine amidotransferase type 2 M4S28_13455 IPR017932 Glutamine amidotransferase type 2 domain M4S28_13460 IPR035461 GmhA/DiaA M4S28_13460 IPR004515 Phosphoheptose isomerase M4S28_13460 IPR001347 Sugar isomerase (SIS) M4S28_13465 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain M4S28_13465 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type M4S28_13465 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily M4S28_13465 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily M4S28_13465 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal M4S28_13465 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal M4S28_13465 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal M4S28_13475 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M4S28_13475 IPR006309 DNA polymerase 3, epsilon subunit M4S28_13475 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_13475 IPR012337 Ribonuclease H-like superfamily M4S28_13475 IPR036397 Ribonuclease H superfamily M4S28_13480 IPR012337 Ribonuclease H-like superfamily M4S28_13480 IPR002156 Ribonuclease H domain M4S28_13480 IPR036397 Ribonuclease H superfamily M4S28_13480 IPR022892 Ribonuclease HI M4S28_13485 IPR013216 Methyltransferase type 11 M4S28_13485 IPR026669 Arsenite methyltransferase-like M4S28_13485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_13490 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain M4S28_13490 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain M4S28_13490 IPR017782 Hydroxyacylglutathione hydrolase M4S28_13490 IPR001279 Metallo-beta-lactamase M4S28_13490 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_13495 IPR000189 Prokaryotic transglycosylase, active site M4S28_13495 IPR008258 Transglycosylase SLT domain 1 M4S28_13495 IPR036779 LysM domain superfamily M4S28_13495 IPR023346 Lysozyme-like domain superfamily M4S28_13495 IPR018392 LysM domain M4S28_13505 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M4S28_13505 IPR005135 Endonuclease/exonuclease/phosphatase M4S28_13505 IPR022958 Uncharacterised protein family UPF0294 M4S28_13510 IPR002187 Nitrogen regulatory protein PII M4S28_13510 IPR011322 Nitrogen regulatory PII-like, alpha/beta M4S28_13510 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M4S28_13510 IPR017918 Nitrogen regulatory protein PII, conserved site M4S28_13510 IPR002332 Nitrogen regulatory protein P-II, urydylation site M4S28_13515 IPR009056 Cytochrome c-like domain M4S28_13515 IPR036909 Cytochrome c-like domain superfamily M4S28_13520 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain M4S28_13520 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal M4S28_13520 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal M4S28_13520 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal M4S28_13520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_13520 IPR012094 tRNA(Ile)-lysidine synthase M4S28_13525 IPR001095 Acetyl-CoA carboxylase, alpha subunit M4S28_13525 IPR029045 ClpP/crotonase-like domain superfamily M4S28_13525 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal M4S28_13530 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_13530 IPR004805 DNA polymerase III, alpha subunit M4S28_13530 IPR016195 Polymerase/histidinol phosphatase-like M4S28_13530 IPR004013 PHP domain M4S28_13530 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type M4S28_13530 IPR029460 DNA polymerase, helix-hairpin-helix motif M4S28_13530 IPR040982 DNA polymerase III alpha subunit finger domain M4S28_13530 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain M4S28_13530 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M4S28_13535 IPR022898 Ribonuclease HII M4S28_13535 IPR001352 Ribonuclease HII/HIII M4S28_13535 IPR024567 Ribonuclease HII/HIII domain M4S28_13535 IPR012337 Ribonuclease H-like superfamily M4S28_13535 IPR036397 Ribonuclease H superfamily M4S28_13540 IPR003835 Glycosyl transferase, family 19 M4S28_13545 IPR011004 Trimeric LpxA-like superfamily M4S28_13545 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase M4S28_13545 IPR001451 Hexapeptide repeat M4S28_13545 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal M4S28_13545 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily M4S28_13550 IPR029069 HotDog domain superfamily M4S28_13550 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ M4S28_13550 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ M4S28_13555 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD M4S28_13555 IPR018357 Hexapeptide transferase, conserved site M4S28_13555 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region M4S28_13555 IPR011004 Trimeric LpxA-like superfamily M4S28_13555 IPR001451 Hexapeptide repeat M4S28_13560 IPR005632 Chaperone protein Skp M4S28_13560 IPR024930 Skp domain superfamily M4S28_13565 IPR000184 Bacterial surface antigen (D15) M4S28_13565 IPR010827 POTRA domain, BamA/TamA-like M4S28_13565 IPR039910 Surface antigen D15-like M4S28_13565 IPR023707 Outer membrane protein assembly factor BamA M4S28_13565 IPR034746 POTRA domain M4S28_13570 IPR001478 PDZ domain M4S28_13570 IPR041489 PDZ domain 6 M4S28_13570 IPR036034 PDZ superfamily M4S28_13570 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase M4S28_13570 IPR008915 Peptidase M50 M4S28_13575 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal M4S28_13575 IPR036291 NAD(P)-binding domain superfamily M4S28_13575 IPR036169 DXP reductoisomerase, C-terminal domain superfamily M4S28_13575 IPR026877 DXP reductoisomerase C-terminal domain M4S28_13575 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase M4S28_13575 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal M4S28_13580 IPR000374 Phosphatidate cytidylyltransferase M4S28_13585 IPR001441 Decaprenyl diphosphate synthase-like M4S28_13585 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site M4S28_13585 IPR036424 Decaprenyl diphosphate synthase-like superfamily M4S28_13590 IPR036191 RRF superfamily M4S28_13590 IPR002661 Ribosome recycling factor M4S28_13590 IPR023584 Ribosome recycling factor domain M4S28_13595 IPR011817 Uridylate kinase M4S28_13595 IPR015963 Uridylate kinase, bacteria M4S28_13595 IPR036393 Acetylglutamate kinase-like superfamily M4S28_13595 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_13600 IPR036402 Elongation factor Ts, dimerisation domain superfamily M4S28_13600 IPR001816 Translation elongation factor EFTs/EF1B M4S28_13600 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation M4S28_13600 IPR018101 Translation elongation factor Ts, conserved site M4S28_13600 IPR009060 UBA-like superfamily M4S28_13605 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily M4S28_13605 IPR001865 Ribosomal protein S2 M4S28_13605 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid M4S28_13605 IPR018130 Ribosomal protein S2, conserved site M4S28_13610 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 M4S28_13610 IPR001714 Peptidase M24, methionine aminopeptidase M4S28_13610 IPR036005 Creatinase/aminopeptidase-like M4S28_13610 IPR000994 Peptidase M24 M4S28_13615 IPR002934 Polymerase, nucleotidyl transferase domain M4S28_13615 IPR002912 ACT domain M4S28_13615 IPR003607 HD/PDEase domain M4S28_13615 IPR006674 HD domain M4S28_13615 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase M4S28_13615 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme M4S28_13620 IPR020911 Uncharacterised protein family UPF0325 M4S28_13625 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_13625 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_13625 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_13630 IPR007384 Protein of unknown function UCP006257 M4S28_13630 IPR036814 YqcC-like superfamily M4S28_13630 IPR023376 YqcC-like domain M4S28_13655 IPR003791 Protein of unknown function UPF0178 M4S28_13675 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT M4S28_13675 IPR011540 AbgT, Proteobacteria M4S28_13680 IPR000473 Ribosomal protein L36 M4S28_13680 IPR035977 Ribosomal protein L36 superfamily M4S28_13685 IPR042105 Ribosomal protein L31 superfamily M4S28_13685 IPR002150 Ribosomal protein L31 M4S28_13685 IPR034704 L28p-like M4S28_13685 IPR027493 Ribosomal protein L31 type B M4S28_13690 IPR023370 TrmO-like, N-terminal domain M4S28_13690 IPR041369 TrmO, C-terminal M4S28_13690 IPR023368 Uncharacterised protein family UPF0066, conserved site M4S28_13690 IPR040372 YaeB-like M4S28_13690 IPR036413 YaeB-like superfamily M4S28_13690 IPR036414 YaeB, N-terminal domain superfamily M4S28_13695 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain M4S28_13695 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily M4S28_13695 IPR033730 Prokaryote proline-tRNA ligase core domain M4S28_13695 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 M4S28_13695 IPR002316 Proline-tRNA ligase, class IIa M4S28_13695 IPR036621 Anticodon-binding domain superfamily M4S28_13695 IPR004154 Anticodon-binding M4S28_13695 IPR006195 Aminoacyl-tRNA synthetase, class II M4S28_13695 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) M4S28_13695 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type M4S28_13705 IPR009624 Uncharacterised protein family UPF0253 M4S28_13720 IPR039429 Serine hydroxymethyltransferase-like domain M4S28_13720 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site M4S28_13720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_13720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_13720 IPR001085 Serine hydroxymethyltransferase M4S28_13720 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_13740 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_13740 IPR013780 Glycosyl hydrolase, all-beta M4S28_13740 IPR017853 Glycoside hydrolase superfamily M4S28_13740 IPR032091 Maltogenic Amylase, C-terminal M4S28_13740 IPR012769 Trehalose-6-phosphate hydrolase M4S28_13745 IPR001996 Phosphotransferase system, IIB component, type 1 M4S28_13745 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M4S28_13745 IPR011296 Phosphotransferase system, trehalose-specific IIBC component M4S28_13745 IPR013013 Phosphotransferase system, EIIC component, type 1 M4S28_13745 IPR003352 Phosphotransferase system, EIIC M4S28_13745 IPR036878 Glucose permease domain IIB M4S28_13745 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M4S28_13750 IPR000843 LacI-type HTH domain M4S28_13750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_13750 IPR028082 Periplasmic binding protein-like I M4S28_13750 IPR012771 Trehalose operon repressor M4S28_13760 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M4S28_13760 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase M4S28_13760 IPR006543 Histidinol-phosphate phosphatase M4S28_13760 IPR036412 HAD-like superfamily M4S28_13760 IPR023214 HAD superfamily M4S28_13765 IPR017871 ABC transporter, conserved site M4S28_13765 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain M4S28_13765 IPR018449 NIL domain M4S28_13765 IPR003439 ABC transporter-like M4S28_13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_13765 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal M4S28_13765 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria M4S28_13765 IPR003593 AAA+ ATPase domain M4S28_13765 IPR026253 Methionine import ATP-binding protein MetN M4S28_13770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_13770 IPR035906 MetI-like superfamily M4S28_13775 IPR004872 Lipoprotein NlpA family M4S28_13780 IPR023738 Maltoporin M4S28_13780 IPR003192 Porin, LamB-type M4S28_13780 IPR036998 Porin, LamB-type superfamily M4S28_13785 IPR016908 Uncharacterised conserved protein UCP029037 M4S28_13800 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal M4S28_13800 IPR039001 Peptidoglycan-associated lipoprotein M4S28_13800 IPR036737 OmpA-like domain superfamily M4S28_13800 IPR006665 OmpA-like domain M4S28_13800 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_13800 IPR006664 Outer membrane protein, bacterial M4S28_13810 IPR009948 Syd M4S28_13810 IPR038228 Syd superfamily M4S28_13815 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF M4S28_13815 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal M4S28_13815 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 M4S28_13825 IPR029787 Nucleotide cyclase M4S28_13825 IPR000160 GGDEF domain M4S28_13830 IPR021826 Domain of unknown function DUF3412 M4S28_13830 IPR031100 LOG family M4S28_13830 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily M4S28_13830 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal M4S28_13835 IPR008918 Helix-hairpin-helix motif, class 2 M4S28_13835 IPR029060 PIN-like domain superfamily M4S28_13835 IPR022895 Flap endonuclease Xni M4S28_13835 IPR038969 Flap endonuclease M4S28_13835 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal M4S28_13835 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M4S28_13835 IPR002421 5'-3' exonuclease, N-terminal M4S28_13835 IPR020045 DNA polymerase I-like, H3TH domain M4S28_13840 IPR039426 Vitamin B12 transporter BtuB-like M4S28_13840 IPR012910 TonB-dependent receptor, plug domain M4S28_13840 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_13840 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_13840 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_13845 IPR011224 Ribosomal RNA large subunit methyltransferase M M4S28_13845 IPR002877 Ribosomal RNA methyltransferase FtsJ domain M4S28_13845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_13845 IPR040739 RlmM ferredoxin-like domain M4S28_13860 IPR000847 Transcription regulator HTH, LysR M4S28_13860 IPR005119 LysR, substrate-binding M4S28_13860 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_13860 IPR036390 Winged helix DNA-binding domain superfamily M4S28_13865 IPR001763 Rhodanese-like domain M4S28_13865 IPR036873 Rhodanese-like domain superfamily M4S28_13865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_13865 IPR026340 Thiazole biosynthesis domain M4S28_13865 IPR020536 Thil, AANH domain M4S28_13865 IPR004114 THUMP domain M4S28_13865 IPR003720 tRNA sulfurtransferase ThiI M4S28_13870 IPR025713 Motility protein B, N-terminal domain M4S28_13870 IPR036737 OmpA-like domain superfamily M4S28_13870 IPR006665 OmpA-like domain M4S28_13875 IPR000540 Flagellar motor protein MotA, conserved site M4S28_13875 IPR002898 MotA/TolQ/ExbB proton channel M4S28_13880 IPR037004 Exonuclease VII, small subunit superfamily M4S28_13880 IPR003761 Exonuclease VII, small subunit M4S28_13885 IPR008949 Isoprenoid synthase domain superfamily M4S28_13885 IPR000092 Polyprenyl synthetase M4S28_13885 IPR033749 Polyprenyl synthetase, conserved site M4S28_13890 IPR005477 Deoxyxylulose-5-phosphate synthase M4S28_13890 IPR029061 Thiamin diphosphate-binding fold M4S28_13890 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M4S28_13890 IPR005475 Transketolase-like, pyrimidine-binding domain M4S28_13890 IPR020826 Transketolase binding site M4S28_13890 IPR033248 Transketolase, C-terminal domain M4S28_13890 IPR005474 Transketolase, N-terminal M4S28_13900 IPR007686 YutG/PgpA domain M4S28_13900 IPR026037 Phosphatidylglycerophosphatase A M4S28_13900 IPR036681 PgpA-like superfamily M4S28_13905 IPR010918 PurM-like, C-terminal domain M4S28_13905 IPR036676 PurM-like, C-terminal domain superfamily M4S28_13905 IPR016188 PurM-like, N-terminal domain M4S28_13905 IPR036921 PurM-like, N-terminal domain superfamily M4S28_13905 IPR006283 Thiamine-monophosphate kinase M4S28_13910 IPR035926 NusB-like superfamily M4S28_13910 IPR011605 NusB antitermination factor M4S28_13910 IPR006027 NusB/RsmB/TIM44 M4S28_13915 IPR034964 Lumazine synthase M4S28_13915 IPR002180 Lumazine/riboflavin synthase M4S28_13915 IPR036467 Lumazine/riboflavin synthase superfamily M4S28_13920 IPR032677 GTP cyclohydrolase II M4S28_13920 IPR036144 RibA-like superfamily M4S28_13920 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M4S28_13920 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB M4S28_13925 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M4S28_13925 IPR001783 Lumazine-binding protein M4S28_13925 IPR026017 Lumazine-binding domain M4S28_13925 IPR017938 Riboflavin synthase-like beta-barrel M4S28_13930 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal M4S28_13930 IPR011549 Riboflavin-specific deaminase, C-terminal M4S28_13930 IPR004794 Riboflavin biosynthesis protein RibD M4S28_13930 IPR024072 Dihydrofolate reductase-like domain superfamily M4S28_13930 IPR016193 Cytidine deaminase-like M4S28_13930 IPR002125 Cytidine and deoxycytidylate deaminase domain M4S28_13930 IPR016192 APOBEC/CMP deaminase, zinc-binding M4S28_13935 IPR005144 ATP-cone domain M4S28_13935 IPR003796 Ribonucleotide reductase regulator NrdR-like M4S28_13940 IPR000965 GPR domain M4S28_13940 IPR012134 Glutamate-5-semialdehyde dehydrogenase M4S28_13940 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site M4S28_13940 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_13940 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_13940 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_13940 IPR015590 Aldehyde dehydrogenase domain M4S28_13945 IPR036393 Acetylglutamate kinase-like superfamily M4S28_13945 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_13945 IPR041739 Glutamate-5-kinase domain M4S28_13945 IPR001057 Glutamate/acetylglutamate kinase M4S28_13945 IPR011529 Glutamate 5-kinase M4S28_13945 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase M4S28_13945 IPR019797 Glutamate 5-kinase, conserved site M4S28_13945 IPR002478 PUA domain M4S28_13945 IPR015947 PUA-like superfamily M4S28_13945 IPR036974 PUA domain superfamily M4S28_13950 IPR038208 Sigma factor-binding protein Crl superfamily M4S28_13950 IPR009986 Sigma factor-binding transcriptional regulator Crl M4S28_13955 IPR029058 Alpha/Beta hydrolase fold M4S28_13955 IPR010520 UPF0255 family M4S28_13960 IPR000836 Phosphoribosyltransferase domain M4S28_13960 IPR029057 Phosphoribosyltransferase-like M4S28_13960 IPR023747 Xanthine-guanine phosphoribosyltransferase M4S28_13965 IPR026033 Azaguanine-like transporters M4S28_13965 IPR006043 Xanthine/uracil/vitamin C permease M4S28_13970 IPR002933 Peptidase M20 M4S28_13970 IPR011650 Peptidase M20, dimerisation domain M4S28_13970 IPR001160 Peptidase M20C, Xaa-His dipeptidase M4S28_13990 IPR001365 Adenosine/AMP deaminase domain M4S28_13990 IPR028892 Adenine deaminase type 2 M4S28_13990 IPR006330 Adenosine/adenine deaminase M4S28_13990 IPR032466 Metal-dependent hydrolase M4S28_14005 IPR002547 tRNA-binding domain M4S28_14005 IPR012340 Nucleic acid-binding, OB-fold M4S28_14010 IPR000843 LacI-type HTH domain M4S28_14010 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_14010 IPR028082 Periplasmic binding protein-like I M4S28_14015 IPR018052 Aldose 1-epimerase, conserved site M4S28_14015 IPR013458 Aldose 1-epimerase, bacterial M4S28_14015 IPR015443 Aldose 1-epimerase M4S28_14015 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase M4S28_14015 IPR011013 Galactose mutarotase-like domain superfamily M4S28_14015 IPR014718 Glycoside hydrolase-type carbohydrate-binding M4S28_14020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_14020 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_14020 IPR006206 Mevalonate/galactokinase M4S28_14020 IPR006203 GHMP kinase, ATP-binding, conserved site M4S28_14020 IPR006204 GHMP kinase N-terminal domain M4S28_14020 IPR036554 GHMP kinase, C-terminal domain superfamily M4S28_14020 IPR013750 GHMP kinase, C-terminal domain M4S28_14020 IPR019539 Galactokinase galactose-binding domain M4S28_14020 IPR019741 Galactokinase, conserved site M4S28_14020 IPR022963 Galactokinase, bacterial M4S28_14020 IPR000705 Galactokinase M4S28_14025 IPR001937 Galactose-1-phosphate uridyl transferase, class I M4S28_14025 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site M4S28_14025 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal M4S28_14025 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal M4S28_14025 IPR036265 HIT-like superfamily M4S28_14030 IPR016040 NAD(P)-binding domain M4S28_14030 IPR036291 NAD(P)-binding domain superfamily M4S28_14030 IPR005886 UDP-glucose 4-epimerase M4S28_14035 IPR028082 Periplasmic binding protein-like I M4S28_14035 IPR000843 LacI-type HTH domain M4S28_14035 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_14040 IPR013783 Immunoglobulin-like fold M4S28_14040 IPR004199 Beta galactosidase small chain/ domain 5 M4S28_14040 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M4S28_14040 IPR011013 Galactose mutarotase-like domain superfamily M4S28_14040 IPR008979 Galactose-binding-like domain superfamily M4S28_14040 IPR014718 Glycoside hydrolase-type carbohydrate-binding M4S28_14040 IPR006101 Glycoside hydrolase, family 2 M4S28_14040 IPR023232 Glycoside hydrolase, family 2, active site M4S28_14040 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase M4S28_14040 IPR006103 Glycoside hydrolase family 2, catalytic domain M4S28_14040 IPR023230 Glycoside hydrolase, family 2, conserved site M4S28_14040 IPR006104 Glycosyl hydrolases family 2, sugar binding domain M4S28_14040 IPR017853 Glycoside hydrolase superfamily M4S28_14040 IPR032312 Beta-galactosidase, domain 4 M4S28_14040 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich M4S28_14045 IPR004375 YhcH/YjgK/YiaL family M4S28_14045 IPR037012 YhcH/YjgK/YiaL superfamily M4S28_14050 IPR002293 Amino acid/polyamine transporter I M4S28_14055 IPR002293 Amino acid/polyamine transporter I M4S28_14065 IPR012341 Six-hairpin glycosidase-like superfamily M4S28_14065 IPR001661 Glycoside hydrolase, family 37 M4S28_14065 IPR008928 Six-hairpin glycosidase superfamily M4S28_14070 IPR017853 Glycoside hydrolase superfamily M4S28_14070 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich M4S28_14070 IPR004199 Beta galactosidase small chain/ domain 5 M4S28_14070 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M4S28_14070 IPR011013 Galactose mutarotase-like domain superfamily M4S28_14070 IPR008979 Galactose-binding-like domain superfamily M4S28_14070 IPR014718 Glycoside hydrolase-type carbohydrate-binding M4S28_14070 IPR006101 Glycoside hydrolase, family 2 M4S28_14070 IPR023232 Glycoside hydrolase, family 2, active site M4S28_14070 IPR023230 Glycoside hydrolase, family 2, conserved site M4S28_14070 IPR006103 Glycoside hydrolase family 2, catalytic domain M4S28_14070 IPR006104 Glycosyl hydrolases family 2, sugar binding domain M4S28_14070 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase M4S28_14070 IPR013783 Immunoglobulin-like fold M4S28_14070 IPR032312 Beta-galactosidase, domain 4 M4S28_14080 IPR035906 MetI-like superfamily M4S28_14080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_14085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_14085 IPR035906 MetI-like superfamily M4S28_14090 IPR003593 AAA+ ATPase domain M4S28_14090 IPR003439 ABC transporter-like M4S28_14090 IPR017871 ABC transporter, conserved site M4S28_14090 IPR040582 MalK, OB fold domain M4S28_14090 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14095 IPR002528 Multi antimicrobial extrusion protein M4S28_14100 IPR018212 Sodium/solute symporter, conserved site M4S28_14100 IPR001734 Sodium/solute symporter M4S28_14100 IPR038377 Sodium/glucose symporter superfamily M4S28_14105 IPR017853 Glycoside hydrolase superfamily M4S28_14105 IPR031704 Glycosyl hydrolase family 36, N-terminal M4S28_14105 IPR031705 Glycosyl hydrolase family 36, C-terminal M4S28_14105 IPR002252 Glycoside hydrolase family 36 M4S28_14105 IPR038417 Alpha-galactosidase, N-terminal domain superfamily M4S28_14105 IPR013785 Aldolase-type TIM barrel M4S28_14105 IPR000111 Glycoside hydrolase family 27/36, conserved site M4S28_14110 IPR028082 Periplasmic binding protein-like I M4S28_14110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_14110 IPR000843 LacI-type HTH domain M4S28_14115 IPR036390 Winged helix DNA-binding domain superfamily M4S28_14115 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14115 IPR000847 Transcription regulator HTH, LysR M4S28_14115 IPR005119 LysR, substrate-binding M4S28_14120 IPR003370 Chromate transporter M4S28_14125 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_14150 IPR022399 Helicase/secretion neighbourhood ATPase M4S28_14150 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14150 IPR001482 Type II/IV secretion system protein M4S28_14180 IPR014004 Transport-associated and nodulation domain, bacteria M4S28_14180 IPR004846 Type II/III secretion system M4S28_14180 IPR032789 Pilus formation protein, N-terminal M4S28_14180 IPR001775 GspD/PilQ family M4S28_14180 IPR007055 BON domain M4S28_14205 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_14205 IPR018060 DNA binding HTH domain, AraC-type M4S28_14205 IPR037923 Transcription regulator HTH-like M4S28_14205 IPR009057 Homeobox-like domain superfamily M4S28_14205 IPR020449 Transcription regulator HTH, AraC- type M4S28_14205 IPR018062 HTH domain AraC-type, conserved site M4S28_14210 IPR000873 AMP-dependent synthetase/ligase M4S28_14210 IPR020845 AMP-binding, conserved site M4S28_14210 IPR042099 AMP-dependent synthetase-like superfamily M4S28_14215 IPR005119 LysR, substrate-binding M4S28_14215 IPR036390 Winged helix DNA-binding domain superfamily M4S28_14215 IPR000847 Transcription regulator HTH, LysR M4S28_14215 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14225 IPR005119 LysR, substrate-binding M4S28_14225 IPR000847 Transcription regulator HTH, LysR M4S28_14225 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14225 IPR036390 Winged helix DNA-binding domain superfamily M4S28_14230 IPR036361 SAP domain superfamily M4S28_14230 IPR018668 DNA-binding protein VF530-like M4S28_14235 IPR004540 Translation elongation factor EFG/EF2 M4S28_14235 IPR005517 Translation elongation factor EFG/EF2, domain IV M4S28_14235 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_14235 IPR035649 EFG, domain V M4S28_14235 IPR005225 Small GTP-binding protein domain M4S28_14235 IPR009022 Elongation factor G, domain III M4S28_14235 IPR035647 EF-G domain III/V-like M4S28_14235 IPR000640 Elongation factor EFG, domain V-like M4S28_14235 IPR000795 Transcription factor, GTP-binding domain M4S28_14235 IPR031157 Tr-type G domain, conserved site M4S28_14235 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14235 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_14235 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_14235 IPR041095 Elongation Factor G, domain II M4S28_14235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_14240 IPR041166 LapB, rubredoxin metal binding domain M4S28_14240 IPR003593 AAA+ ATPase domain M4S28_14240 IPR004504 DNA repair protein RadA M4S28_14240 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14240 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M4S28_14240 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_14240 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_14250 IPR036412 HAD-like superfamily M4S28_14250 IPR041449 Phosphoserine phosphatase, N-terminal M4S28_14250 IPR023190 Phosphoserine phosphatase, domain 2 M4S28_14250 IPR023214 HAD superfamily M4S28_14260 IPR035994 Nucleoside phosphorylase superfamily M4S28_14260 IPR000845 Nucleoside phosphorylase domain M4S28_14260 IPR018016 Nucleoside phosphorylase, conserved site M4S28_14260 IPR004402 Purine nucleoside phosphorylase DeoD-type M4S28_14265 IPR006124 Metalloenzyme M4S28_14265 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_14265 IPR024052 Phosphopentomutase DeoB cap domain superfamily M4S28_14265 IPR010045 Phosphopentomutase M4S28_14270 IPR013465 Thymidine phosphorylase M4S28_14270 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site M4S28_14270 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic M4S28_14270 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal M4S28_14270 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase M4S28_14270 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily M4S28_14270 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily M4S28_14270 IPR017459 Glycosyl transferase family 3, N-terminal domain M4S28_14270 IPR000312 Glycosyl transferase, family 3 M4S28_14270 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily M4S28_14275 IPR013785 Aldolase-type TIM barrel M4S28_14275 IPR011343 Deoxyribose-phosphate aldolase M4S28_14275 IPR002915 DeoC/FbaB/ lacD aldolase M4S28_14275 IPR023649 Deoxyribose-phosphate aldolase type II M4S28_14280 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_14280 IPR002668 Concentrative nucleoside transporter N-terminal domain M4S28_14280 IPR008276 Concentrative nucleoside transporter M4S28_14280 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M4S28_14280 IPR011657 Concentrative nucleoside transporter C-terminal domain M4S28_14285 IPR018228 Deoxyribonuclease, TatD-related, conserved site M4S28_14285 IPR032466 Metal-dependent hydrolase M4S28_14285 IPR001130 TatD family M4S28_14305 IPR005119 LysR, substrate-binding M4S28_14305 IPR037416 Nodulation protein D, PBP2 M4S28_14305 IPR000847 Transcription regulator HTH, LysR M4S28_14305 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14305 IPR036390 Winged helix DNA-binding domain superfamily M4S28_14310 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_14310 IPR035647 EF-G domain III/V-like M4S28_14310 IPR041732 Peptide chain release factor 3, GTP-binding domain M4S28_14310 IPR005225 Small GTP-binding protein domain M4S28_14310 IPR000795 Transcription factor, GTP-binding domain M4S28_14310 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_14310 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily M4S28_14310 IPR032090 Peptide chain release factor 3, C-terminal M4S28_14310 IPR004548 Peptide chain release factor 3 M4S28_14310 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14310 IPR031157 Tr-type G domain, conserved site M4S28_14315 IPR006464 N-acetyltransferase RimI/Ard1 M4S28_14315 IPR016181 Acyl-CoA N-acyltransferase M4S28_14315 IPR000182 GNAT domain M4S28_14325 IPR000182 GNAT domain M4S28_14325 IPR016181 Acyl-CoA N-acyltransferase M4S28_14330 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT M4S28_14330 IPR036527 SCP2 sterol-binding domain superfamily M4S28_14330 IPR003033 SCP2 sterol-binding domain M4S28_14330 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 M4S28_14335 IPR005330 MHYT domain M4S28_14335 IPR000160 GGDEF domain M4S28_14335 IPR035919 EAL domain superfamily M4S28_14335 IPR001633 EAL domain M4S28_14335 IPR029787 Nucleotide cyclase M4S28_14340 IPR036206 Thiamin phosphate synthase superfamily M4S28_14340 IPR001539 Peptidase U32 M4S28_14345 IPR001539 Peptidase U32 M4S28_14350 IPR002528 Multi antimicrobial extrusion protein M4S28_14360 IPR023605 Lipoprotein NlpI M4S28_14360 IPR013026 Tetratricopeptide repeat-containing domain M4S28_14360 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_14360 IPR013105 Tetratricopeptide repeat 2 M4S28_14360 IPR019734 Tetratricopeptide repeat M4S28_14365 IPR012162 Polyribonucleotide nucleotidyltransferase M4S28_14365 IPR001247 Exoribonuclease, phosphorolytic domain 1 M4S28_14365 IPR015847 Exoribonuclease, phosphorolytic domain 2 M4S28_14365 IPR036345 Exoribonuclease, PH domain 2 superfamily M4S28_14365 IPR004087 K Homology domain M4S28_14365 IPR036612 K Homology domain, type 1 superfamily M4S28_14365 IPR003029 S1 domain M4S28_14365 IPR022967 RNA-binding domain, S1 M4S28_14365 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_14365 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily M4S28_14365 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain M4S28_14365 IPR027408 PNPase/RNase PH domain superfamily M4S28_14365 IPR012340 Nucleic acid-binding, OB-fold M4S28_14365 IPR004088 K Homology domain, type 1 M4S28_14370 IPR009068 S15/NS1, RNA-binding M4S28_14370 IPR005290 Ribosomal protein S15, bacterial-type M4S28_14370 IPR000589 Ribosomal protein S15 M4S28_14375 IPR014780 tRNA pseudouridine synthase II, TruB M4S28_14375 IPR002501 Pseudouridine synthase II, N-terminal M4S28_14375 IPR032819 tRNA pseudouridylate synthase B, C-terminal M4S28_14375 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal M4S28_14375 IPR036974 PUA domain superfamily M4S28_14375 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_14375 IPR015947 PUA-like superfamily M4S28_14380 IPR000238 Ribosome-binding factor A M4S28_14380 IPR015946 K homology domain-like, alpha/beta M4S28_14380 IPR023799 Ribosome-binding factor A domain superfamily M4S28_14385 IPR009061 Putative DNA-binding domain superfamily M4S28_14385 IPR006847 Translation initiation factor IF-2, N-terminal M4S28_14385 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14385 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_14385 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M4S28_14385 IPR023115 Translation initiation factor IF- 2, domain 3 M4S28_14385 IPR015760 Translation initiation factor IF- 2 M4S28_14385 IPR000178 Translation initiation factor aIF-2, bacterial-like M4S28_14385 IPR000795 Transcription factor, GTP-binding domain M4S28_14385 IPR005225 Small GTP-binding protein domain M4S28_14385 IPR013575 Initiation factor 2 associated domain, bacterial M4S28_14390 IPR010213 Transcription termination factor NusA M4S28_14390 IPR022967 RNA-binding domain, S1 M4S28_14390 IPR013735 Transcription factor NusA, N-terminal M4S28_14390 IPR003029 S1 domain M4S28_14390 IPR036555 NusA, N-terminal domain superfamily M4S28_14390 IPR030842 Transcription termination/antitermination protein NusA, bacterial M4S28_14390 IPR012340 Nucleic acid-binding, OB-fold M4S28_14390 IPR009019 K homology domain superfamily, prokaryotic type M4S28_14390 IPR025249 KH domain, NusA-like M4S28_14390 IPR015946 K homology domain-like, alpha/beta M4S28_14390 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical M4S28_14390 IPR010214 Transcription termination factor NusA, C-terminal duplication M4S28_14395 IPR035956 RimP, N-terminal domain superfamily M4S28_14395 IPR028998 Ribosome maturation factor RimP, C-terminal M4S28_14395 IPR003728 Ribosome maturation factor RimP M4S28_14395 IPR028989 Ribosome maturation factor RimP, N-terminal M4S28_14395 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily M4S28_14410 IPR004692 Preprotein translocase SecG subunit M4S28_14415 IPR005841 Alpha-D-phosphohexomutase superfamily M4S28_14415 IPR016066 Alpha-D-phosphohexomutase, conserved site M4S28_14415 IPR006352 Phosphoglucosamine mutase, bacterial type M4S28_14415 IPR005843 Alpha-D-phosphohexomutase, C-terminal M4S28_14415 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M4S28_14415 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M4S28_14415 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M4S28_14415 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M4S28_14415 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M4S28_14420 IPR006390 Dihydropteroate synthase M4S28_14420 IPR011005 Dihydropteroate synthase-like M4S28_14420 IPR000489 Pterin-binding domain M4S28_14425 IPR000642 Peptidase M41 M4S28_14425 IPR037219 Peptidase M41-like M4S28_14425 IPR011546 Peptidase M41, FtsH extracellular M4S28_14425 IPR003960 ATPase, AAA-type, conserved site M4S28_14425 IPR005936 Peptidase, FtsH M4S28_14425 IPR003959 ATPase, AAA-type, core M4S28_14425 IPR041569 AAA ATPase, AAA+ lid domain M4S28_14425 IPR003593 AAA+ ATPase domain M4S28_14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14430 IPR015507 Ribosomal RNA large subunit methyltransferase E M4S28_14430 IPR002877 Ribosomal RNA methyltransferase FtsJ domain M4S28_14430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_14435 IPR001890 RNA-binding, CRM domain M4S28_14435 IPR017924 RNA-binding protein YhbY M4S28_14435 IPR035920 YhbY-like superfamily M4S28_14440 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily M4S28_14440 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal M4S28_14440 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal M4S28_14440 IPR018151 Transcription elongation factor, GreA/GreB, conserved site M4S28_14440 IPR028624 Transcription elongation factor GreA/GreB M4S28_14440 IPR023459 Transcription elongation factor GreA/GreB family M4S28_14440 IPR006359 Transcription elongation factor GreA M4S28_14440 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily M4S28_14445 IPR033900 Porin domain, Gram-negative type M4S28_14445 IPR023614 Porin domain superfamily M4S28_14450 IPR012338 Beta-lactamase/transpeptidase-like M4S28_14450 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C M4S28_14455 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily M4S28_14455 IPR006667 SLC41 divalent cation transporters, integral membrane domain M4S28_14455 IPR038076 MgtE, N-terminal domain superfamily M4S28_14455 IPR038048 Magnesium transporter MgtE, transmembrane domain M4S28_14455 IPR006668 Magnesium transporter, MgtE intracellular domain M4S28_14455 IPR000644 CBS domain M4S28_14455 IPR006669 Magnesium transporter MgtE M4S28_14460 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 M4S28_14460 IPR024088 Tyrosine-tRNA ligase, bacterial-type M4S28_14460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_14460 IPR036986 RNA-binding S4 domain superfamily M4S28_14460 IPR002942 RNA-binding S4 domain M4S28_14460 IPR002305 Aminoacyl-tRNA synthetase, class Ic M4S28_14460 IPR002307 Tyrosine-tRNA ligase M4S28_14460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_14465 IPR011055 Duplicated hybrid motif M4S28_14465 IPR018392 LysM domain M4S28_14465 IPR013731 Opacity-associated protein A, N-terminal M4S28_14465 IPR016047 Peptidase M23 M4S28_14470 IPR001036 Acriflavin resistance protein M4S28_14470 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_14480 IPR035903 HesB-like domain superfamily M4S28_14480 IPR017870 FeS cluster insertion, C-terminal, conserved site M4S28_14480 IPR016092 FeS cluster insertion protein M4S28_14480 IPR000361 FeS cluster biogenesis M4S28_14480 IPR023063 FeS cluster insertion protein ErpA M4S28_14485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_14485 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase M4S28_14485 IPR005814 Aminotransferase class-III M4S28_14485 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_14485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_14490 IPR002549 Transmembrane protein TqsA-like M4S28_14495 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_14495 IPR013675 Methyltransferase small, N-terminal M4S28_14495 IPR023543 rRNA small subunit methyltransferase C M4S28_14495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_14495 IPR007848 Methyltransferase small domain M4S28_14500 IPR001789 Signal transduction response regulator, receiver domain M4S28_14500 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_14500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_14500 IPR033414 Periplasmic sensor domain M4S28_14500 IPR036641 HPT domain superfamily M4S28_14500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_14500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_14500 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_14500 IPR003660 HAMP domain M4S28_14500 IPR011006 CheY-like superfamily M4S28_14500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_14500 IPR005467 Histidine kinase domain M4S28_14505 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_14505 IPR039424 Solute-binding protein family 5 M4S28_14505 IPR023765 Solute-binding protein family 5, conserved site M4S28_14505 IPR000914 Solute-binding protein family 5 domain M4S28_14510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_14510 IPR035906 MetI-like superfamily M4S28_14515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_14515 IPR035906 MetI-like superfamily M4S28_14515 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M4S28_14520 IPR003593 AAA+ ATPase domain M4S28_14520 IPR003439 ABC transporter-like M4S28_14520 IPR017871 ABC transporter, conserved site M4S28_14520 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14525 IPR003593 AAA+ ATPase domain M4S28_14525 IPR003439 ABC transporter-like M4S28_14525 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14525 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_14525 IPR017871 ABC transporter, conserved site M4S28_14535 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type M4S28_14540 IPR017853 Glycoside hydrolase superfamily M4S28_14540 IPR029018 Beta-hexosaminidase-like, domain 2 M4S28_14540 IPR025705 Beta-hexosaminidase M4S28_14540 IPR015883 Glycoside hydrolase family 20, catalytic domain M4S28_14540 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M4S28_14545 IPR008928 Six-hairpin glycosidase superfamily M4S28_14545 IPR012341 Six-hairpin glycosidase-like superfamily M4S28_14545 IPR011013 Galactose mutarotase-like domain superfamily M4S28_14545 IPR033432 Glycosyl hydrolase 36, catalytic domain M4S28_14545 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal M4S28_14545 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily M4S28_14545 IPR010383 Glycosyl hydrolase 94 M4S28_14545 IPR009342 Putative carbohydrate binding domain M4S28_14550 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M4S28_14550 IPR016066 Alpha-D-phosphohexomutase, conserved site M4S28_14550 IPR005841 Alpha-D-phosphohexomutase superfamily M4S28_14550 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M4S28_14550 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M4S28_14550 IPR005843 Alpha-D-phosphohexomutase, C-terminal M4S28_14550 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M4S28_14550 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M4S28_14555 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA M4S28_14555 IPR003439 ABC transporter-like M4S28_14555 IPR017871 ABC transporter, conserved site M4S28_14555 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_14555 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14555 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit M4S28_14555 IPR013611 Transport-associated OB, type 2 M4S28_14555 IPR003593 AAA+ ATPase domain M4S28_14565 IPR026045 Ferric binding protein M4S28_14565 IPR006059 Bacterial extracellular solute-binding protein M4S28_14570 IPR024041 Ammonium transporter AmtB-like domain M4S28_14570 IPR018047 Ammonium transporter, conserved site M4S28_14570 IPR001905 Ammonium transporter M4S28_14570 IPR029020 Ammonium/urea transporter M4S28_14575 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M4S28_14575 IPR002332 Nitrogen regulatory protein P-II, urydylation site M4S28_14575 IPR017918 Nitrogen regulatory protein PII, conserved site M4S28_14575 IPR011322 Nitrogen regulatory PII-like, alpha/beta M4S28_14575 IPR002187 Nitrogen regulatory protein PII M4S28_14580 IPR008249 Uncharacterised protein family UPF0231 M4S28_14585 IPR015932 Aconitase, domain 2 M4S28_14585 IPR015929 Aconitase B, swivel M4S28_14585 IPR004406 Aconitase B M4S28_14585 IPR015933 Aconitase B, HEAT-like domain M4S28_14585 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 M4S28_14585 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain M4S28_14585 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel M4S28_14585 IPR036008 Aconitase, iron-sulfur domain M4S28_14585 IPR036288 Aconitase B, HEAT-like domain superfamily M4S28_14585 IPR018136 Aconitase family, 4Fe-4S cluster binding site M4S28_14590 IPR002641 Patatin-like phospholipase domain M4S28_14590 IPR001423 Lysophospholipase patatin, conserved site M4S28_14590 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_14595 IPR011813 Penicillin-binding protein 1B M4S28_14595 IPR001264 Glycosyl transferase, family 51 M4S28_14595 IPR001460 Penicillin-binding protein, transpeptidase M4S28_14595 IPR028166 Bifunctional transglycosylase second domain M4S28_14595 IPR012338 Beta-lactamase/transpeptidase-like M4S28_14595 IPR023346 Lysozyme-like domain superfamily M4S28_14595 IPR036950 Penicillin binding protein transglycosylase domain M4S28_14600 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14600 IPR001650 Helicase, C-terminal M4S28_14600 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_14600 IPR011545 DEAD/DEAH box helicase domain M4S28_14600 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal M4S28_14600 IPR007502 Helicase-associated domain M4S28_14600 IPR010225 ATP-dependent helicase HrpB M4S28_14605 IPR005224 Sugar fermentation stimulation protein M4S28_14605 IPR040452 Sugar fermentation stimulation protein, C-terminal M4S28_14605 IPR041465 SfsA, N-terminal OB domain M4S28_14610 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M4S28_14610 IPR000962 Zinc finger, DksA/TraR C4-type M4S28_14610 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M4S28_14610 IPR012784 RNA polymerase-binding transcription factor DksA M4S28_14610 IPR037187 DksA, N-terminal domain superfamily M4S28_14615 IPR022380 Glutamyl-Q tRNA(Asp) synthetase M4S28_14615 IPR000924 Glutamyl/glutaminyl-tRNA synthetase M4S28_14615 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain M4S28_14615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_14620 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain M4S28_14620 IPR002646 Poly A polymerase, head domain M4S28_14620 IPR010206 Poly(A) polymerase I M4S28_14620 IPR025866 Polymerase A arginine-rich C-terminal domain M4S28_14625 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily M4S28_14625 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK M4S28_14630 IPR003700 Ketopantoate hydroxymethyltransferase M4S28_14630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_14630 IPR040442 Pyruvate kinase-like domain superfamily M4S28_14635 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain M4S28_14635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_14635 IPR004821 Cytidyltransferase-like domain M4S28_14635 IPR003721 Pantoate-beta-alanine ligase M4S28_14640 IPR013525 ABC-2 type transporter M4S28_14640 IPR000412 ABC-2 transporter M4S28_14645 IPR003593 AAA+ ATPase domain M4S28_14645 IPR003439 ABC transporter-like M4S28_14645 IPR017871 ABC transporter, conserved site M4S28_14645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14650 IPR011547 SLC26A/SulP transporter domain M4S28_14650 IPR001902 SLC26A/SulP transporter M4S28_14650 IPR002645 STAS domain M4S28_14650 IPR036513 STAS domain superfamily M4S28_14655 IPR036874 Carbonic anhydrase superfamily M4S28_14655 IPR001765 Carbonic anhydrase M4S28_14655 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site M4S28_14660 IPR005904 Hypoxanthine phosphoribosyl transferase M4S28_14660 IPR029057 Phosphoribosyltransferase-like M4S28_14660 IPR000836 Phosphoribosyltransferase domain M4S28_14665 IPR009057 Homeobox-like domain superfamily M4S28_14665 IPR001647 DNA-binding HTH domain, TetR-type M4S28_14665 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_14670 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M4S28_14670 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_14670 IPR023753 FAD/NAD(P)-binding domain M4S28_14670 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_14670 IPR006258 Dihydrolipoamide dehydrogenase M4S28_14670 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M4S28_14670 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_14675 IPR036625 E3-binding domain superfamily M4S28_14675 IPR011053 Single hybrid motif M4S28_14675 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M4S28_14675 IPR004167 Peripheral subunit-binding domain M4S28_14675 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex M4S28_14675 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain M4S28_14675 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site M4S28_14675 IPR000089 Biotin/lipoyl attachment M4S28_14680 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal M4S28_14680 IPR004660 Pyruvate dehydrogenase E1 component M4S28_14680 IPR041621 Pyruvate dehydrogenase E1 component, middle domain M4S28_14680 IPR029061 Thiamin diphosphate-binding fold M4S28_14680 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M4S28_14680 IPR005474 Transketolase, N-terminal M4S28_14685 IPR036390 Winged helix DNA-binding domain superfamily M4S28_14685 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14685 IPR008920 Transcription regulator FadR/GntR, C-terminal M4S28_14685 IPR011711 GntR, C-terminal M4S28_14685 IPR000524 Transcription regulator HTH, GntR M4S28_14690 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily M4S28_14690 IPR002502 N-acetylmuramoyl-L-alanine amidase domain M4S28_14695 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal M4S28_14695 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal M4S28_14695 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal M4S28_14695 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD M4S28_14695 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily M4S28_14695 IPR004393 Nicotinate-nucleotide pyrophosphorylase M4S28_14695 IPR013785 Aldolase-type TIM barrel M4S28_14700 IPR012902 Prokaryotic N-terminal methylation site M4S28_14700 IPR001082 Fimbrial protein pilin M4S28_14705 IPR013374 ATPase, type IV, pilus assembly, PilB M4S28_14705 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14705 IPR001482 Type II/IV secretion system protein M4S28_14705 IPR037257 General secretory system II, protein E, N-terminal superfamily M4S28_14705 IPR007831 General secretory system II, protein E, N-terminal M4S28_14705 IPR042181 Type II secretion system, protein E, N-terminal M4S28_14710 IPR042094 Type II secretion system F domain superfamily M4S28_14710 IPR001992 Type II secretion system conserved site M4S28_14710 IPR003004 GspF/PilC family M4S28_14710 IPR018076 Type II secretion system F domain M4S28_14715 IPR010627 Peptidase A24A, N-terminal M4S28_14715 IPR014032 Peptidase A24A, prepilin type IV, bacterial M4S28_14715 IPR000045 Prepilin type IV endopeptidase, peptidase domain M4S28_14720 IPR001977 Dephospho-CoA kinase M4S28_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14725 IPR009777 Cell division protein ZapD M4S28_14725 IPR027462 Z ring-associated protein D, C-terminal M4S28_14725 IPR036268 ZapD domain superfamily M4S28_14730 IPR013088 Zinc finger, NHR/GATA-type M4S28_14730 IPR005584 DNA gyrase inhibitor YacG M4S28_14735 IPR001857 Ribosomal protein L19 M4S28_14735 IPR038657 Ribosomal protein L19 superfamily M4S28_14735 IPR008991 Translation protein SH3-like domain superfamily M4S28_14735 IPR018257 Ribosomal protein L19, conserved site M4S28_14740 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain M4S28_14740 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal M4S28_14740 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_14740 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria M4S28_14740 IPR029028 Alpha/beta knot methyltransferases M4S28_14745 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_14745 IPR011961 16S rRNA processing protein RimM M4S28_14745 IPR027275 PRC-barrel domain M4S28_14745 IPR011033 PRC-barrel-like superfamily M4S28_14745 IPR002676 RimM, N-terminal M4S28_14745 IPR036976 RimM, N-terminal domain superfamily M4S28_14750 IPR023803 Ribosomal protein S16 domain superfamily M4S28_14750 IPR000307 Ribosomal protein S16 M4S28_14750 IPR020592 Ribosomal protein S16, conserved site M4S28_14755 IPR022941 Signal recognition particle, SRP54 subunit M4S28_14755 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily M4S28_14755 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain M4S28_14755 IPR003593 AAA+ ATPase domain M4S28_14755 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14755 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily M4S28_14755 IPR013822 Signal recognition particle SRP54, helical bundle M4S28_14755 IPR004125 Signal recognition particle, SRP54 subunit, M-domain M4S28_14755 IPR004780 Signal recognition particle protein M4S28_14760 IPR002541 Cytochrome c assembly protein M4S28_14765 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_14765 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_14765 IPR002550 CNNM, transmembrane domain M4S28_14765 IPR005170 Transporter-associated domain M4S28_14765 IPR000644 CBS domain M4S28_14770 IPR024473 Transposase, IS4, N-terminal M4S28_14770 IPR012337 Ribonuclease H-like superfamily M4S28_14770 IPR002559 Transposase, IS4-like M4S28_14775 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily M4S28_14775 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M4S28_14775 IPR003815 S-ribosylhomocysteinase (LuxS) M4S28_14785 IPR006334 Glutamate--cysteine ligase, monofunctional M4S28_14785 IPR007370 Glutamate--cysteine ligase M4S28_14785 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M4S28_14790 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M4S28_14790 IPR011765 Peptidase M16, N-terminal M4S28_14790 IPR001431 Peptidase M16, zinc-binding site M4S28_14790 IPR007863 Peptidase M16, C-terminal M4S28_14795 IPR032816 SNARE associated Golgi protein M4S28_14800 IPR020843 Polyketide synthase, enoylreductase domain M4S28_14800 IPR036291 NAD(P)-binding domain superfamily M4S28_14800 IPR011032 GroES-like superfamily M4S28_14800 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_14800 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_14800 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M4S28_14805 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit M4S28_14810 IPR013785 Aldolase-type TIM barrel M4S28_14810 IPR001882 Biotin-binding site M4S28_14810 IPR000089 Biotin/lipoyl attachment M4S28_14810 IPR003379 Carboxylase, conserved domain M4S28_14810 IPR005776 Oxaloacetate decarboxylase, alpha subunit M4S28_14810 IPR000891 Pyruvate carboxyltransferase M4S28_14810 IPR011053 Single hybrid motif M4S28_14815 IPR023424 Oxaloacetate decarboxylase gamma chain, probable M4S28_14815 IPR005899 Sodium ion-translocating decarboxylase M4S28_14870 IPR036107 Carbon storage regulator superfamily M4S28_14870 IPR003751 Translational regulator CsrA M4S28_14875 IPR036393 Acetylglutamate kinase-like superfamily M4S28_14875 IPR002912 ACT domain M4S28_14875 IPR041740 Aspartokinase catalytic domain M4S28_14875 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_14875 IPR005260 Aspartate kinase, monofunctional class M4S28_14875 IPR001341 Aspartate kinase M4S28_14875 IPR018042 Aspartate kinase, conserved site M4S28_14875 IPR027795 CASTOR, ACT domain M4S28_14880 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria M4S28_14880 IPR012947 Threonyl/alanyl tRNA synthetase, SAD M4S28_14880 IPR003156 DHHA1 domain M4S28_14880 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_14880 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal M4S28_14880 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain M4S28_14880 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily M4S28_14880 IPR002318 Alanine-tRNA ligase, class IIc M4S28_14880 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily M4S28_14885 IPR003593 AAA+ ATPase domain M4S28_14885 IPR013765 DNA recombination and repair protein RecA M4S28_14885 IPR020584 DNA recombination/repair protein RecA, conserved site M4S28_14885 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14885 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M4S28_14885 IPR023400 DNA recombination and repair protein RecA, C-terminal M4S28_14885 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface M4S28_14920 IPR040980 SWI2/SNF2 ATPase M4S28_14920 IPR004473 Restriction endonuclease, type I, HsdR M4S28_14920 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal M4S28_14920 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_14920 IPR021810 Protein of unknown function DUF3387 M4S28_14920 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_14935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_14935 IPR003356 DNA methylase, adenine-specific M4S28_14935 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily M4S28_14935 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain M4S28_14965 IPR020584 DNA recombination/repair protein RecA, conserved site M4S28_14965 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface M4S28_14965 IPR023400 DNA recombination and repair protein RecA, C-terminal M4S28_14965 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain M4S28_14965 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14965 IPR013765 DNA recombination and repair protein RecA M4S28_14965 IPR003593 AAA+ ATPase domain M4S28_14975 IPR008136 CinA, C-terminal M4S28_14975 IPR036653 CinA-like, C-terminal M4S28_14980 IPR000432 DNA mismatch repair protein MutS, C-terminal M4S28_14980 IPR007696 DNA mismatch repair protein MutS, core M4S28_14980 IPR017261 DNA mismatch repair protein MutS/MSH M4S28_14980 IPR016151 DNA mismatch repair protein MutS, N-terminal M4S28_14980 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M4S28_14980 IPR007860 DNA mismatch repair protein MutS, connector domain M4S28_14980 IPR036678 MutS, connector domain superfamily M4S28_14980 IPR007861 DNA mismatch repair protein MutS, clamp M4S28_14980 IPR007695 DNA mismatch repair protein MutS-like, N-terminal M4S28_14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_14980 IPR005748 DNA mismatch repair protein MutS M4S28_14985 IPR007624 RNA polymerase sigma-70 region 3 M4S28_14985 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_14985 IPR012761 RNA polymerase sigma factor RpoS M4S28_14985 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_14985 IPR013325 RNA polymerase sigma factor, region 2 M4S28_14985 IPR007630 RNA polymerase sigma-70 region 4 M4S28_14985 IPR007627 RNA polymerase sigma-70 region 2 M4S28_14985 IPR014284 RNA polymerase sigma-70 like domain M4S28_14985 IPR000943 RNA polymerase sigma-70 M4S28_14985 IPR009042 RNA polymerase sigma-70 region 1.2 M4S28_14990 IPR016047 Peptidase M23 M4S28_14990 IPR036779 LysM domain superfamily M4S28_14990 IPR011055 Duplicated hybrid motif M4S28_14990 IPR018392 LysM domain M4S28_14995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_14995 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase M4S28_15000 IPR002828 Survival protein SurE-like phosphatase/nucleotidase M4S28_15000 IPR030048 Survival protein SurE M4S28_15000 IPR036523 SurE-like phosphatase/nucleotidase superfamily M4S28_15005 IPR020119 Pseudouridine synthase TruD, conserved site M4S28_15005 IPR011760 Pseudouridine synthase, TruD, insertion domain M4S28_15005 IPR042214 Pseudouridine synthase, TruD, catalytic domain M4S28_15005 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_15005 IPR001656 Pseudouridine synthase, TruD M4S28_15010 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase M4S28_15010 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily M4S28_15010 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site M4S28_15015 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site M4S28_15015 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_15015 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M4S28_15015 IPR034683 Cytidylyltransferase IspD/TarI M4S28_15020 IPR023081 Cell division protein FtsB M4S28_15020 IPR007060 Septum formation initiator FtsL/DivIC M4S28_15025 IPR036849 Enolase-like, C-terminal domain superfamily M4S28_15025 IPR020810 Enolase, C-terminal TIM barrel domain M4S28_15025 IPR029017 Enolase-like, N-terminal M4S28_15025 IPR000941 Enolase M4S28_15025 IPR020811 Enolase, N-terminal M4S28_15025 IPR020809 Enolase, conserved site M4S28_15030 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15030 IPR033828 CTP synthase GATase domain M4S28_15030 IPR017926 Glutamine amidotransferase M4S28_15030 IPR017456 CTP synthase, N-terminal M4S28_15030 IPR004468 CTP synthase M4S28_15030 IPR029062 Class I glutamine amidotransferase-like M4S28_15035 IPR011551 NTP pyrophosphohydrolase MazG M4S28_15035 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M4S28_15040 IPR004811 RelA/SpoT family M4S28_15040 IPR003607 HD/PDEase domain M4S28_15040 IPR012675 Beta-grasp domain superfamily M4S28_15040 IPR002912 ACT domain M4S28_15040 IPR004095 TGS M4S28_15040 IPR012676 TGS-like M4S28_15040 IPR033655 RelA, TGS domain M4S28_15040 IPR007685 RelA/SpoT M4S28_15045 IPR030390 RNA methyltransferase TrmA, active site M4S28_15045 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD M4S28_15045 IPR030391 RNA methyltransferase TrmA, conserved site M4S28_15045 IPR012340 Nucleic acid-binding, OB-fold M4S28_15045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_15045 IPR002792 TRAM domain M4S28_15045 IPR010280 (Uracil-5)-methyltransferase family M4S28_15050 IPR005467 Histidine kinase domain M4S28_15050 IPR001789 Signal transduction response regulator, receiver domain M4S28_15050 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_15050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_15050 IPR036641 HPT domain superfamily M4S28_15050 IPR019247 Histidine kinase BarA, N-terminal M4S28_15050 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_15050 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_15050 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_15050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_15050 IPR003660 HAMP domain M4S28_15050 IPR011006 CheY-like superfamily M4S28_15055 IPR008278 4'-phosphopantetheinyl transferase domain M4S28_15055 IPR037143 4'-phosphopantetheinyl transferase domain superfamily M4S28_15055 IPR002582 Holo-[acyl carrier protein] synthase M4S28_15055 IPR004568 Phosphopantetheine-protein transferase domain M4S28_15060 IPR036130 Pyridoxine 5'-phosphate synthase M4S28_15060 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ M4S28_15060 IPR013785 Aldolase-type TIM barrel M4S28_15065 IPR003717 Recombination protein O, RecO M4S28_15065 IPR012340 Nucleic acid-binding, OB-fold M4S28_15065 IPR022572 DNA replication/recombination mediator RecO, N-terminal M4S28_15065 IPR037278 ARFGAP/RecO-like zinc finger M4S28_15070 IPR004044 K Homology domain, type 2 M4S28_15070 IPR006073 GTP binding domain M4S28_15070 IPR030388 Era-type guanine nucleotide-binding (G) domain M4S28_15070 IPR005662 GTP-binding protein Era M4S28_15070 IPR005225 Small GTP-binding protein domain M4S28_15070 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15070 IPR015946 K homology domain-like, alpha/beta M4S28_15070 IPR009019 K homology domain superfamily, prokaryotic type M4S28_15075 IPR000999 Ribonuclease III domain M4S28_15075 IPR011907 Ribonuclease III M4S28_15075 IPR036389 Ribonuclease III, endonuclease domain superfamily M4S28_15075 IPR014720 Double-stranded RNA-binding domain M4S28_15080 IPR019757 Peptidase S26A, signal peptidase I, lysine active site M4S28_15080 IPR019756 Peptidase S26A, signal peptidase I, serine active site M4S28_15080 IPR019533 Peptidase S26 M4S28_15080 IPR000223 Peptidase S26A, signal peptidase I M4S28_15080 IPR036286 LexA/Signal peptidase-like superfamily M4S28_15080 IPR019758 Peptidase S26A, signal peptidase I, conserved site M4S28_15085 IPR013842 GTP-binding protein LepA, C-terminal M4S28_15085 IPR038363 LepA, C-terminal domain superfamily M4S28_15085 IPR031157 Tr-type G domain, conserved site M4S28_15085 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_15085 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15085 IPR000795 Transcription factor, GTP-binding domain M4S28_15085 IPR005225 Small GTP-binding protein domain M4S28_15085 IPR035654 Elongation factor 4, domain IV M4S28_15085 IPR000640 Elongation factor EFG, domain V-like M4S28_15085 IPR035647 EF-G domain III/V-like M4S28_15085 IPR006297 Elongation factor 4 M4S28_15085 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_15095 IPR038484 MucB/RseB, C-terminal domain superfamily M4S28_15095 IPR033434 MucB/RseB, N-terminal M4S28_15095 IPR005588 MucB/RseB M4S28_15095 IPR033436 MucB/RseB, C-terminal M4S28_15100 IPR005573 Anti sigma-E protein RseA, C-terminal M4S28_15100 IPR005572 Anti sigma-E protein RseA, N-terminal M4S28_15100 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily M4S28_15100 IPR026279 Sigma-E factor negative regulatory protein RseA M4S28_15105 IPR039425 RNA polymerase sigma-70 like M4S28_15105 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_15105 IPR014284 RNA polymerase sigma-70 like domain M4S28_15105 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site M4S28_15105 IPR007627 RNA polymerase sigma-70 region 2 M4S28_15105 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 M4S28_15105 IPR014286 RNA polymerase sigma-70 RpoE type M4S28_15105 IPR013325 RNA polymerase sigma factor, region 2 M4S28_15105 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_15110 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily M4S28_15110 IPR005288 L-aspartate oxidase M4S28_15110 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal M4S28_15110 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain M4S28_15110 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_15110 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily M4S28_15115 IPR005631 Flavinator of succinate dehydrogenase M4S28_15115 IPR036714 Flavinator of succinate dehydrogenase superfamily M4S28_15120 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M4S28_15120 IPR023758 tRNA-modifying protein YgfZ M4S28_15120 IPR017703 YgfZ/GcvT conserved site M4S28_15135 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M4S28_15135 IPR002938 FAD-binding domain M4S28_15135 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_15135 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M4S28_15140 IPR002938 FAD-binding domain M4S28_15140 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_15140 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site M4S28_15140 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase M4S28_15140 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 M4S28_15145 IPR011978 Uncharacterised protein family UPF0149 M4S28_15145 IPR036255 YgfB-like superfamily M4S28_15150 IPR007838 Cell division protein ZapA-like M4S28_15150 IPR036192 Cell division protein ZapA-like superfamily M4S28_15150 IPR023771 Cell division protein ZapA, eubacteria M4S28_15160 IPR002698 5-formyltetrahydrofolate cyclo-ligase M4S28_15160 IPR037171 NagB/RpiA transferase-like M4S28_15160 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily M4S28_15165 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup M4S28_15165 IPR004788 Ribose 5-phosphate isomerase, type A M4S28_15165 IPR037171 NagB/RpiA transferase-like M4S28_15170 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M4S28_15170 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M4S28_15170 IPR036291 NAD(P)-binding domain superfamily M4S28_15170 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M4S28_15170 IPR002912 ACT domain M4S28_15170 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M4S28_15185 IPR017685 HTH-type transcriptional regulator ArgP M4S28_15185 IPR005119 LysR, substrate-binding M4S28_15185 IPR000847 Transcription regulator HTH, LysR M4S28_15185 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_15185 IPR036390 Winged helix DNA-binding domain superfamily M4S28_15185 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M4S28_15190 IPR023445 Arginine exporter protein ArgO, enterobacteria M4S28_15190 IPR001123 Amino acid exporter protein, LeuE-type M4S28_15190 IPR004777 L-lysine exporter/arginine exporter M4S28_15195 IPR023408 Mechanosensitive ion channel MscS domain superfamily M4S28_15195 IPR010920 LSM domain superfamily M4S28_15195 IPR006685 Mechanosensitive ion channel MscS M4S28_15195 IPR011066 Mechanosensitive ion channel MscS, C-terminal M4S28_15195 IPR006686 Mechanosensitive ion channel MscS, conserved site M4S28_15195 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M4S28_15195 IPR008910 Conserved TM helix M4S28_15200 IPR013785 Aldolase-type TIM barrel M4S28_15200 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype M4S28_15200 IPR000771 Fructose-bisphosphate aldolase, class-II M4S28_15205 IPR001576 Phosphoglycerate kinase M4S28_15205 IPR036043 Phosphoglycerate kinase superfamily M4S28_15205 IPR015911 Phosphoglycerate kinase, conserved site M4S28_15205 IPR015824 Phosphoglycerate kinase, N-terminal M4S28_15210 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M4S28_15210 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M4S28_15210 IPR036291 NAD(P)-binding domain superfamily M4S28_15210 IPR006422 D-erythrose-4-phosphate dehydrogenase M4S28_15210 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M4S28_15215 IPR020826 Transketolase binding site M4S28_15215 IPR029061 Thiamin diphosphate-binding fold M4S28_15215 IPR005474 Transketolase, N-terminal M4S28_15215 IPR033247 Transketolase family M4S28_15215 IPR033248 Transketolase, C-terminal domain M4S28_15215 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M4S28_15215 IPR005475 Transketolase-like, pyrimidine-binding domain M4S28_15215 IPR005478 Transketolase, bacterial-like M4S28_15220 IPR022628 S-adenosylmethionine synthetase, N-terminal M4S28_15220 IPR002133 S-adenosylmethionine synthetase M4S28_15220 IPR022636 S-adenosylmethionine synthetase superfamily M4S28_15220 IPR022629 S-adenosylmethionine synthetase, central domain M4S28_15220 IPR022630 S-adenosylmethionine synthetase, C-terminal M4S28_15220 IPR022631 S-adenosylmethionine synthetase, conserved site M4S28_15230 IPR035240 SprT-like, zinc ribbon domain M4S28_15230 IPR006640 SprT-like M4S28_15230 IPR023483 Uncharacterised protein family SprT M4S28_15235 IPR007346 Endonuclease I M4S28_15240 IPR029028 Alpha/beta knot methyltransferases M4S28_15240 IPR015947 PUA-like superfamily M4S28_15240 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_15240 IPR006700 Ribosomal RNA small subunit methyltransferase E M4S28_15245 IPR011761 ATP-grasp fold M4S28_15245 IPR013815 ATP-grasp fold, subdomain 1 M4S28_15245 IPR006284 Glutathione synthetase, prokaryotic M4S28_15245 IPR004218 Prokaryotic glutathione synthetase, ATP-binding M4S28_15245 IPR016185 Pre-ATP-grasp domain superfamily M4S28_15245 IPR004215 Prokaryotic glutathione synthetase, N-terminal M4S28_15250 IPR003774 Protein of unknown function UPF0301 M4S28_15255 IPR037027 YqgF/RNase H-like domain superfamily M4S28_15255 IPR006641 YqgF/RNase H-like domain M4S28_15255 IPR005227 Putative pre-16S rRNA nuclease M4S28_15255 IPR012337 Ribonuclease H-like superfamily M4S28_15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15265 IPR006321 Pilus retraction protein PilT M4S28_15265 IPR001482 Type II/IV secretion system protein M4S28_15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15270 IPR006321 Pilus retraction protein PilT M4S28_15270 IPR001482 Type II/IV secretion system protein M4S28_15270 IPR003593 AAA+ ATPase domain M4S28_15275 IPR011078 Pyridoxal phosphate homeostasis protein M4S28_15275 IPR001608 Alanine racemase, N-terminal M4S28_15275 IPR029066 PLP-binding barrel M4S28_15280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_15280 IPR036291 NAD(P)-binding domain superfamily M4S28_15280 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain M4S28_15280 IPR000304 Pyrroline-5-carboxylate reductase M4S28_15280 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal M4S28_15285 IPR003425 CCB3/YggT M4S28_15290 IPR005228 Conserved hypothetical protein CHP00251 M4S28_15290 IPR003746 Protein of unknown function DUF167 M4S28_15290 IPR036591 YggU-like superfamily M4S28_15365 IPR008766 Replication gene A protein M4S28_15410 IPR029001 Inosine triphosphate pyrophosphatase-like M4S28_15410 IPR020922 dITP/XTP pyrophosphatase M4S28_15410 IPR002637 Ham1-like protein M4S28_15415 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_15415 IPR007197 Radical SAM M4S28_15415 IPR004559 Heme chaperone HemW-like M4S28_15415 IPR010723 HemN, C-terminal M4S28_15415 IPR006638 Elp3/MiaB/NifB M4S28_15415 IPR034505 Anaerobic coproporphyrinogen-III oxidase M4S28_15420 IPR012338 Beta-lactamase/transpeptidase-like M4S28_15420 IPR015868 Glutaminase M4S28_15425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_15425 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type M4S28_15430 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_15430 IPR029119 MutY, C-terminal M4S28_15430 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M4S28_15430 IPR003265 HhH-GPD domain M4S28_15430 IPR005760 A/G-specific adenine glycosylase MutY M4S28_15430 IPR011257 DNA glycosylase M4S28_15430 IPR004036 Endonuclease III-like, conserved site-2 M4S28_15430 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif M4S28_15430 IPR000445 Helix-hairpin-helix motif M4S28_15430 IPR004035 Endonuclease III, iron-sulphur binding site M4S28_15435 IPR036766 Fe(II) trafficking protein YggX superfamily M4S28_15435 IPR007457 Fe(II) trafficking protein YggX M4S28_15440 IPR024570 Murein transglycosylase-C, N-terminal M4S28_15440 IPR000189 Prokaryotic transglycosylase, active site M4S28_15440 IPR008258 Transglycosylase SLT domain 1 M4S28_15440 IPR023346 Lysozyme-like domain superfamily M4S28_15440 IPR023664 Murein transglycosylase-C M4S28_15480 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_15480 IPR003660 HAMP domain M4S28_15480 IPR004090 Chemotaxis methyl-accepting receptor M4S28_15480 IPR033480 Single Cache domain 2 M4S28_15570 IPR001789 Signal transduction response regulator, receiver domain M4S28_15570 IPR037522 HD-GYP domain M4S28_15570 IPR011006 CheY-like superfamily M4S28_15570 IPR003607 HD/PDEase domain M4S28_15590 IPR005495 Permease LptG/LptF-related M4S28_15590 IPR030923 LPS export ABC transporter permease LptG M4S28_15595 IPR005495 Permease LptG/LptF-related M4S28_15595 IPR030922 LPS export ABC transporter permease LptF M4S28_15600 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B M4S28_15600 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal M4S28_15600 IPR023042 Peptidase M17, leucine aminopeptidase M4S28_15600 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal M4S28_15605 IPR007459 DNA polymerase III chi subunit, HolC M4S28_15605 IPR036768 DNA polymerase III subunit chi superfamily M4S28_15610 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily M4S28_15610 IPR002303 Valine-tRNA ligase M4S28_15610 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M4S28_15610 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm M4S28_15610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_15610 IPR033705 Valyl tRNA synthetase, anticodon-binding domain M4S28_15610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_15610 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M4S28_15610 IPR002300 Aminoacyl-tRNA synthetase, class Ia M4S28_15610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_15610 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm M4S28_15615 IPR001915 Peptidase M48 M4S28_15620 IPR010295 Protein of unknown function DUF898 M4S28_15630 IPR016181 Acyl-CoA N-acyltransferase M4S28_15630 IPR000182 GNAT domain M4S28_15640 IPR009671 Regulator of ribonuclease activity B domain M4S28_15640 IPR016716 Regulator of ribonuclease activity B M4S28_15640 IPR036701 RraB-like superfamily M4S28_15645 IPR003876 Arginine deiminase M4S28_15650 IPR024904 Ornithine carbamoyltransferase M4S28_15650 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M4S28_15650 IPR006130 Aspartate/ornithine carbamoyltransferase M4S28_15650 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M4S28_15650 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M4S28_15650 IPR002292 Ornithine/putrescine carbamoyltransferase M4S28_15655 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M4S28_15655 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M4S28_15655 IPR006130 Aspartate/ornithine carbamoyltransferase M4S28_15655 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M4S28_15655 IPR002082 Aspartate carbamoyltransferase M4S28_15660 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M4S28_15660 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M4S28_15660 IPR002801 Aspartate transcarbamylase regulatory subunit M4S28_15660 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily M4S28_15660 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal M4S28_15665 IPR006175 YjgF/YER057c/UK114 family M4S28_15665 IPR019897 RidA, conserved site M4S28_15665 IPR035959 RutC-like superfamily M4S28_15665 IPR006056 RidA family M4S28_15670 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase M4S28_15670 IPR002123 Phospholipid/glycerol acyltransferase M4S28_15675 IPR001986 Enolpyruvate transferase domain M4S28_15675 IPR036968 Enolpyruvate transferase domain superfamily M4S28_15675 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta M4S28_15675 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase M4S28_15680 IPR002634 BolA protein M4S28_15680 IPR036065 BolA-like superfamily M4S28_15690 IPR042245 Tgt2/MlaC superfamily M4S28_15690 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M4S28_15695 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD M4S28_15695 IPR003399 Mce/MlaD M4S28_15700 IPR003453 ABC transport permease subunit MlaE, Proteobacteria M4S28_15700 IPR030802 ABC transporter permease MalE M4S28_15705 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15705 IPR003593 AAA+ ATPase domain M4S28_15705 IPR003439 ABC transporter-like M4S28_15705 IPR017871 ABC transporter, conserved site M4S28_15705 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl M4S28_15710 IPR004481 Sodium/potassium/calcium exchanger M4S28_15710 IPR004837 Sodium/calcium exchanger membrane region M4S28_15715 IPR035474 KpsF-like, SIS domain M4S28_15715 IPR000644 CBS domain M4S28_15715 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type M4S28_15715 IPR001347 Sugar isomerase (SIS) M4S28_15720 IPR010023 KdsC family M4S28_15720 IPR023214 HAD superfamily M4S28_15720 IPR036412 HAD-like superfamily M4S28_15730 IPR005653 Organic solvent tolerance-like, N-terminal M4S28_15730 IPR014340 Lipopolysaccharide export system protein LptA M4S28_15735 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15735 IPR030921 LPS export ABC transporter, ATP-binding protein LptB M4S28_15735 IPR003439 ABC transporter-like M4S28_15735 IPR017871 ABC transporter, conserved site M4S28_15735 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M4S28_15735 IPR003593 AAA+ ATPase domain M4S28_15740 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily M4S28_15740 IPR000394 RNA polymerase sigma factor 54 M4S28_15740 IPR007046 RNA polymerase sigma factor 54, core-binding domain M4S28_15740 IPR007634 RNA polymerase sigma factor 54, DNA-binding M4S28_15745 IPR003489 Ribosome hibernation promoting factor/RaiA M4S28_15745 IPR036567 Ribosome hibernation promotion factor-like M4S28_15750 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN M4S28_15750 IPR002178 PTS EIIA type-2 domain M4S28_15750 IPR016152 Phosphotransferase/anion transporter M4S28_15755 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15755 IPR005337 RapZ-like family M4S28_15760 IPR035895 HPr-like superfamily M4S28_15760 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M4S28_15760 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M4S28_15760 IPR000032 Phosphocarrier protein HPr-like M4S28_15765 IPR006668 Magnesium transporter, MgtE intracellular domain M4S28_15765 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily M4S28_15765 IPR006669 Magnesium transporter MgtE M4S28_15765 IPR000644 CBS domain M4S28_15765 IPR006667 SLC41 divalent cation transporters, integral membrane domain M4S28_15765 IPR038048 Magnesium transporter MgtE, transmembrane domain M4S28_15765 IPR038076 MgtE, N-terminal domain superfamily M4S28_15770 IPR035068 Metalloprotease TldD/PmbA, N-terminal M4S28_15770 IPR036059 Metalloprotease TldD/PmbA superfamily M4S28_15770 IPR002510 Metalloprotease TldD/PmbA M4S28_15775 IPR006839 Ribosome-associated, YjgA M4S28_15775 IPR023153 PSPTO4464-like domain superfamily M4S28_15780 IPR003593 AAA+ ATPase domain M4S28_15780 IPR003439 ABC transporter-like M4S28_15780 IPR017871 ABC transporter, conserved site M4S28_15780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15780 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ M4S28_15785 IPR005947 Thiamine ABC transporter, permease protein M4S28_15785 IPR035906 MetI-like superfamily M4S28_15785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_15790 IPR006061 Solute-binding family 1, conserved site M4S28_15790 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria M4S28_15790 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter M4S28_15795 IPR036551 Flavin prenyltransferase-like M4S28_15795 IPR003382 Flavoprotein M4S28_15795 IPR004507 Flavin prenyltransferase UbiX-like M4S28_15800 IPR013221 Mur ligase, central M4S28_15800 IPR036615 Mur ligase, C-terminal domain superfamily M4S28_15800 IPR000713 Mur ligase, N-terminal catalytic domain M4S28_15800 IPR036565 Mur-like, catalytic domain superfamily M4S28_15800 IPR005757 Murein peptide ligase M4S28_15800 IPR004101 Mur ligase, C-terminal M4S28_15805 IPR000146 Fructose-1,6-bisphosphatase class 1 M4S28_15805 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal M4S28_15805 IPR028343 Fructose-1,6-bisphosphatase M4S28_15805 IPR020548 Fructose-1,6-bisphosphatase, active site M4S28_15810 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like M4S28_15810 IPR039126 Gamma-glutamylaminecyclotransferase M4S28_15810 IPR013024 Gamma-glutamyl cyclotransferase-like M4S28_15810 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily M4S28_15815 IPR007452 Translocation and assembly module TamB M4S28_15820 IPR035243 TamA, POTRA domain 1 M4S28_15820 IPR034746 POTRA domain M4S28_15820 IPR000184 Bacterial surface antigen (D15) M4S28_15820 IPR010827 POTRA domain, BamA/TamA-like M4S28_15820 IPR039910 Surface antigen D15-like M4S28_15825 IPR002569 Peptide methionine sulphoxide reductase MsrA M4S28_15825 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M4S28_15830 IPR009491 Protein of unknown function DUF1107 M4S28_15835 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M4S28_15840 IPR019731 Protein of unknown function DUF2607 M4S28_15850 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15850 IPR003439 ABC transporter-like M4S28_15850 IPR003593 AAA+ ATPase domain M4S28_15850 IPR017871 ABC transporter, conserved site M4S28_15870 IPR002891 Adenylyl-sulfate kinase M4S28_15870 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15875 IPR004680 Citrate transporter-like domain M4S28_15875 IPR031312 Sodium/sulphate symporter, conserved site M4S28_15875 IPR006037 Regulator of K+ conductance, C-terminal M4S28_15875 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_15880 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M4S28_15880 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_15880 IPR000795 Transcription factor, GTP-binding domain M4S28_15880 IPR005225 Small GTP-binding protein domain M4S28_15880 IPR031157 Tr-type G domain, conserved site M4S28_15880 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain M4S28_15880 IPR011779 Sulphate adenylyltransferase, large subunit M4S28_15880 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_15885 IPR011784 Sulphate adenylyltransferase, small subunit M4S28_15885 IPR002500 Phosphoadenosine phosphosulphate reductase M4S28_15885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_15890 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase M4S28_15890 IPR029052 Metallo-dependent phosphatase-like M4S28_15890 IPR041827 CpdB, N-terminal metallophosphatase domain M4S28_15890 IPR008334 5'-Nucleotidase, C-terminal M4S28_15890 IPR006179 5'-Nucleotidase/apyrase M4S28_15890 IPR006146 5'-Nucleotidase, conserved site M4S28_15890 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M4S28_15890 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_15935 IPR016181 Acyl-CoA N-acyltransferase M4S28_15935 IPR000182 GNAT domain M4S28_15945 IPR013731 Opacity-associated protein A, N-terminal M4S28_15945 IPR007340 Opacity-associated protein A M4S28_15950 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_15950 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M4S28_15950 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M4S28_15960 IPR000456 Ribosomal protein L17 M4S28_15960 IPR036373 Ribosomal protein L17 superfamily M4S28_15965 IPR011262 DNA-directed RNA polymerase, insert domain M4S28_15965 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type M4S28_15965 IPR011773 DNA-directed RNA polymerase, alpha subunit M4S28_15965 IPR036603 RNA polymerase, RBP11-like subunit M4S28_15965 IPR011260 RNA polymerase, alpha subunit, C-terminal M4S28_15965 IPR036643 DNA-directed RNA polymerase, insert domain superfamily M4S28_15970 IPR036986 RNA-binding S4 domain superfamily M4S28_15970 IPR002942 RNA-binding S4 domain M4S28_15970 IPR001912 Ribosomal protein S4/S9, N-terminal M4S28_15970 IPR005709 Ribosomal protein S4, bacterial-type M4S28_15970 IPR022801 Ribosomal protein S4/S9 M4S28_15970 IPR018079 Ribosomal protein S4, conserved site M4S28_15975 IPR001971 Ribosomal protein S11 M4S28_15975 IPR019981 Ribosomal protein S11, bacterial-type M4S28_15975 IPR018102 Ribosomal S11, conserved site M4S28_15975 IPR036967 Ribosomal protein S11 superfamily M4S28_15980 IPR027437 30s ribosomal protein S13, C-terminal M4S28_15980 IPR018269 Ribosomal protein S13, conserved site M4S28_15980 IPR019980 Ribosomal protein S13, bacterial-type M4S28_15980 IPR010979 Ribosomal protein S13-like, H2TH M4S28_15980 IPR001892 Ribosomal protein S13 M4S28_15985 IPR035977 Ribosomal protein L36 superfamily M4S28_15985 IPR000473 Ribosomal protein L36 M4S28_15990 IPR023201 SecY domain superfamily M4S28_15990 IPR026593 Protein translocase subunit SecY M4S28_15990 IPR030659 SecY conserved site M4S28_15990 IPR002208 SecY/SEC61-alpha family M4S28_15995 IPR036227 Ribosomal L18e/L15P superfamily M4S28_15995 IPR030878 Ribosomal protein L15 M4S28_15995 IPR005749 Ribosomal protein L15, bacterial-type M4S28_15995 IPR001196 Ribosomal protein L15, conserved site M4S28_15995 IPR021131 Ribosomal protein L18e/L15P M4S28_16000 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M4S28_16000 IPR005996 Ribosomal protein L30, bacterial-type M4S28_16000 IPR018038 Ribosomal protein L30, conserved site M4S28_16000 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain M4S28_16005 IPR018192 Ribosomal protein S5, N-terminal, conserved site M4S28_16005 IPR013810 Ribosomal protein S5, N-terminal M4S28_16005 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_16005 IPR005324 Ribosomal protein S5, C-terminal M4S28_16005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_16005 IPR000851 Ribosomal protein S5 M4S28_16005 IPR005712 Ribosomal protein S5, bacterial-type M4S28_16010 IPR005484 Ribosomal protein L18 M4S28_16010 IPR004389 Ribosomal protein L18, bacterial-type M4S28_16015 IPR002358 Ribosomal protein L6, conserved site M4S28_16015 IPR019906 Ribosomal protein L6, bacterial-type M4S28_16015 IPR020040 Ribosomal protein L6, alpha-beta domain M4S28_16015 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily M4S28_16015 IPR000702 Ribosomal protein L6 M4S28_16020 IPR000630 Ribosomal protein S8 M4S28_16020 IPR035987 Ribosomal protein S8 superfamily M4S28_16025 IPR001209 Ribosomal protein S14 M4S28_16025 IPR023036 Ribosomal protein S14, bacterial/plastid M4S28_16025 IPR018271 Ribosomal protein S14, conserved site M4S28_16030 IPR031310 Ribosomal protein L5, N-terminal M4S28_16030 IPR022803 Ribosomal protein L5 domain superfamily M4S28_16030 IPR020930 Ribosomal protein L5, bacterial-type M4S28_16030 IPR020929 Ribosomal protein L5, conserved site M4S28_16030 IPR002132 Ribosomal protein L5 M4S28_16030 IPR031309 Ribosomal protein L5, C-terminal M4S28_16035 IPR005825 Ribosomal protein L24/L26, conserved site M4S28_16035 IPR008991 Translation protein SH3-like domain superfamily M4S28_16035 IPR003256 Ribosomal protein L24 M4S28_16035 IPR014722 Ribosomal protein L2, domain 2 M4S28_16035 IPR005824 KOW M4S28_16035 IPR041988 Ribosomal Protein L26/L24, KOW domain M4S28_16040 IPR036853 Ribosomal protein L14 superfamily M4S28_16040 IPR000218 Ribosomal protein L14P M4S28_16040 IPR005745 Ribosomal protein L14P, bacterial-type M4S28_16040 IPR019972 Ribosomal protein L14P, conserved site M4S28_16045 IPR012340 Nucleic acid-binding, OB-fold M4S28_16045 IPR019984 30S ribosomal protein S17 M4S28_16045 IPR000266 Ribosomal protein S17/S11 M4S28_16045 IPR019979 Ribosomal protein S17, conserved site M4S28_16050 IPR001854 Ribosomal protein L29/L35 M4S28_16050 IPR036049 Ribosomal protein L29/L35 superfamily M4S28_16050 IPR018254 Ribosomal protein L29, conserved site M4S28_16055 IPR020798 Ribosomal protein L16, conserved site M4S28_16055 IPR000114 Ribosomal protein L16 M4S28_16055 IPR036920 Ribosomal protein L10e/L16 superfamily M4S28_16055 IPR016180 Ribosomal protein L10e/L16 M4S28_16060 IPR004087 K Homology domain M4S28_16060 IPR015946 K homology domain-like, alpha/beta M4S28_16060 IPR004044 K Homology domain, type 2 M4S28_16060 IPR009019 K homology domain superfamily, prokaryotic type M4S28_16060 IPR005704 Ribosomal protein S3, bacterial-type M4S28_16060 IPR001351 Ribosomal protein S3, C-terminal M4S28_16060 IPR036419 Ribosomal protein S3, C-terminal domain superfamily M4S28_16060 IPR018280 Ribosomal protein S3, conserved site M4S28_16065 IPR001063 Ribosomal protein L22/L17 M4S28_16065 IPR018260 Ribosomal protein L22/L17, conserved site M4S28_16065 IPR036394 Ribosomal protein L22/L17 superfamily M4S28_16065 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type M4S28_16070 IPR005732 Ribosomal protein S19, bacterial-type M4S28_16070 IPR020934 Ribosomal protein S19 conserved site M4S28_16070 IPR023575 Ribosomal protein S19, superfamily M4S28_16070 IPR002222 Ribosomal protein S19/S15 M4S28_16075 IPR002171 Ribosomal protein L2 M4S28_16075 IPR005880 Ribosomal protein L2, bacterial/organellar-type M4S28_16075 IPR022669 Ribosomal protein L2, C-terminal M4S28_16075 IPR022671 Ribosomal protein L2, conserved site M4S28_16075 IPR014722 Ribosomal protein L2, domain 2 M4S28_16075 IPR008991 Translation protein SH3-like domain superfamily M4S28_16075 IPR012340 Nucleic acid-binding, OB-fold M4S28_16075 IPR014726 Ribosomal protein L2, domain 3 M4S28_16075 IPR022666 Ribosomal Proteins L2, RNA binding domain M4S28_16080 IPR012678 Ribosomal protein L23/L15e core domain superfamily M4S28_16080 IPR013025 Ribosomal protein L25/L23 M4S28_16080 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M4S28_16080 IPR001014 Ribosomal protein L23/L25, conserved site M4S28_16085 IPR002136 Ribosomal protein L4/L1e M4S28_16085 IPR023574 Ribosomal protein L4 domain superfamily M4S28_16085 IPR013005 50S ribosomal protein uL4 M4S28_16090 IPR000597 Ribosomal protein L3 M4S28_16090 IPR019927 Ribosomal protein L3, bacterial/organelle-type M4S28_16090 IPR019926 Ribosomal protein L3, conserved site M4S28_16090 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_16095 IPR036838 Ribosomal protein S10 domain superfamily M4S28_16095 IPR027486 Ribosomal protein S10 domain M4S28_16095 IPR018268 Ribosomal protein S10, conserved site M4S28_16095 IPR001848 Ribosomal protein S10 M4S28_16100 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain M4S28_16100 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_16100 IPR033720 Elongation factor Tu, domain 2 M4S28_16100 IPR031157 Tr-type G domain, conserved site M4S28_16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16100 IPR000795 Transcription factor, GTP-binding domain M4S28_16100 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_16100 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M4S28_16100 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle M4S28_16100 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M4S28_16100 IPR005225 Small GTP-binding protein domain M4S28_16105 IPR031157 Tr-type G domain, conserved site M4S28_16105 IPR005225 Small GTP-binding protein domain M4S28_16105 IPR000795 Transcription factor, GTP-binding domain M4S28_16105 IPR009000 Translation protein, beta-barrel domain superfamily M4S28_16105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_16105 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_16105 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16105 IPR004161 Translation elongation factor EFTu-like, domain 2 M4S28_16105 IPR004540 Translation elongation factor EFG/EF2 M4S28_16105 IPR035649 EFG, domain V M4S28_16105 IPR035647 EF-G domain III/V-like M4S28_16105 IPR009022 Elongation factor G, domain III M4S28_16105 IPR041095 Elongation Factor G, domain II M4S28_16105 IPR005517 Translation elongation factor EFG/EF2, domain IV M4S28_16105 IPR000640 Elongation factor EFG, domain V-like M4S28_16110 IPR023798 Ribosomal protein S7 domain M4S28_16110 IPR036823 Ribosomal protein S7 domain superfamily M4S28_16110 IPR020606 Ribosomal protein S7, conserved site M4S28_16110 IPR005717 Ribosomal protein S7, bacterial/organellar-type M4S28_16110 IPR000235 Ribosomal protein S5/S7 M4S28_16125 IPR027396 DsrEFH-like M4S28_16125 IPR003787 Sulphur relay, DsrE/F-like protein M4S28_16125 IPR017462 Sulphur relay, TusC/DsrF M4S28_16130 IPR027396 DsrEFH-like M4S28_16130 IPR003787 Sulphur relay, DsrE/F-like protein M4S28_16130 IPR017463 Sulphur relay, TusD/DsrE M4S28_16135 IPR039446 Transcriptional regulator DauR-like M4S28_16135 IPR039445 Transcriptional regulator DauR-like, HTH domain M4S28_16135 IPR013559 YheO-like M4S28_16140 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M4S28_16140 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_16140 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M4S28_16150 IPR007236 SlyX M4S28_16155 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_16155 IPR000246 Peptidase T2, asparaginase 2 M4S28_16160 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_16170 IPR006153 Cation/H+ exchanger M4S28_16170 IPR004771 K+/H+ exchanger M4S28_16170 IPR020884 Glutathione-regulated potassium-efflux system protein KefB M4S28_16170 IPR038770 Sodium/solute symporter superfamily M4S28_16170 IPR036291 NAD(P)-binding domain superfamily M4S28_16170 IPR003148 Regulator of K+ conductance, N-terminal M4S28_16175 IPR003680 Flavodoxin-like fold M4S28_16175 IPR029039 Flavoprotein-like superfamily M4S28_16175 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG M4S28_16180 IPR032781 ABC-transporter extension domain M4S28_16180 IPR017871 ABC transporter, conserved site M4S28_16180 IPR003593 AAA+ ATPase domain M4S28_16180 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16180 IPR003439 ABC transporter-like M4S28_16190 IPR029058 Alpha/Beta hydrolase fold M4S28_16190 IPR000073 Alpha/beta hydrolase fold-1 M4S28_16190 IPR012020 AB hydrolase 4 family M4S28_16190 IPR000952 AB hydrolase 4, conserved site M4S28_16195 IPR010648 Uncharacterised protein family UPF0270 M4S28_16195 IPR036685 YehU-like superfamily M4S28_16200 IPR006083 Phosphoribulokinase/uridine kinase M4S28_16200 IPR006082 Phosphoribulokinase M4S28_16200 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16205 IPR018490 Cyclic nucleotide-binding-like M4S28_16205 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16205 IPR014710 RmlC-like jelly roll fold M4S28_16205 IPR018335 Transcription regulator HTH, Crp-type, conserved site M4S28_16205 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16205 IPR018488 Cyclic nucleotide-binding, conserved site M4S28_16205 IPR012318 Crp-type HTH domain M4S28_16205 IPR000595 Cyclic nucleotide-binding domain M4S28_16215 IPR015590 Aldehyde dehydrogenase domain M4S28_16215 IPR017649 Succinylglutamate-semialdehyde dehydrogenase M4S28_16215 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_16215 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_16215 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_16215 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_16215 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_16220 IPR007041 Arginine N-succinyltransferase AstA/AruG M4S28_16220 IPR017650 Arginine N-succinyltransferase M4S28_16220 IPR016181 Acyl-CoA N-acyltransferase M4S28_16225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_16225 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria M4S28_16225 IPR005814 Aminotransferase class-III M4S28_16225 IPR004636 Acetylornithine/Succinylornithine transaminase family M4S28_16225 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_16225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_16230 IPR017926 Glutamine amidotransferase M4S28_16230 IPR029062 Class I glutamine amidotransferase-like M4S28_16230 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain M4S28_16240 IPR002306 Tryptophan-tRNA ligase M4S28_16240 IPR002305 Aminoacyl-tRNA synthetase, class Ic M4S28_16240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_16240 IPR024109 Tryptophan-tRNA ligase, bacterial-type M4S28_16245 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_16245 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic M4S28_16245 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_16245 IPR006549 HAD-superfamily hydrolase,subfamily IIIA M4S28_16245 IPR006439 HAD hydrolase, subfamily IA M4S28_16245 IPR036412 HAD-like superfamily M4S28_16245 IPR023214 HAD superfamily M4S28_16245 IPR037512 Phosphoglycolate phosphatase, prokaryotic M4S28_16250 IPR013785 Aldolase-type TIM barrel M4S28_16250 IPR026019 Ribulose-phosphate 3-epimerase M4S28_16250 IPR000056 Ribulose-phosphate 3-epimerase-like M4S28_16250 IPR011060 Ribulose-phosphate binding barrel M4S28_16255 IPR012263 Adenine modification methylase, M.EcoRV-type M4S28_16255 IPR023095 Adenine-specific methyltransferase, domain 2 M4S28_16255 IPR002052 DNA methylase, N-6 adenine-specific, conserved site M4S28_16255 IPR012327 D12 class N6 adenine-specific DNA methyltransferase M4S28_16255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_16265 IPR030960 3-dehydroquinate synthase domain M4S28_16265 IPR030963 3-dehydroquinate synthase family M4S28_16265 IPR016037 3-dehydroquinate synthase AroB M4S28_16270 IPR023000 Shikimate kinase, conserved site M4S28_16270 IPR000623 Shikimate kinase/Threonine synthase-like 1 M4S28_16270 IPR031322 Shikimate kinase/gluconokinase M4S28_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16275 IPR005644 NolW-like M4S28_16275 IPR038591 NolW-like superfamily M4S28_16275 IPR021731 AMIN domain M4S28_16275 IPR011662 Secretin/TonB, short N-terminal domain M4S28_16275 IPR004846 Type II/III secretion system M4S28_16275 IPR004845 Type II secretion system GspD, conserved site M4S28_16275 IPR001775 GspD/PilQ family M4S28_16275 IPR013355 Type IV pilus secretin PilQ M4S28_16300 IPR031376 Penicillin-binding protein, OB-like domain M4S28_16300 IPR001264 Glycosyl transferase, family 51 M4S28_16300 IPR012338 Beta-lactamase/transpeptidase-like M4S28_16300 IPR023346 Lysozyme-like domain superfamily M4S28_16300 IPR036950 Penicillin binding protein transglycosylase domain M4S28_16300 IPR001460 Penicillin-binding protein, transpeptidase M4S28_16305 IPR005119 LysR, substrate-binding M4S28_16305 IPR000847 Transcription regulator HTH, LysR M4S28_16305 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16305 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16315 IPR037944 Peroxiredoxin-5-like M4S28_16315 IPR013740 Redoxin M4S28_16315 IPR036249 Thioredoxin-like superfamily M4S28_16315 IPR011906 Glutaredoxin domain M4S28_16315 IPR002109 Glutaredoxin M4S28_16315 IPR011767 Glutaredoxin active site M4S28_16315 IPR014025 Glutaredoxin subgroup M4S28_16320 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_16320 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_16320 IPR006258 Dihydrolipoamide dehydrogenase M4S28_16320 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I M4S28_16320 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_16320 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site M4S28_16320 IPR023753 FAD/NAD(P)-binding domain M4S28_16325 IPR035959 RutC-like superfamily M4S28_16325 IPR019897 RidA, conserved site M4S28_16325 IPR006175 YjgF/YER057c/UK114 family M4S28_16325 IPR035709 RutC family, YoaB-like M4S28_16335 IPR016181 Acyl-CoA N-acyltransferase M4S28_16335 IPR000182 GNAT domain M4S28_16335 IPR022761 Fumarate lyase, N-terminal M4S28_16335 IPR008948 L-Aspartase-like M4S28_16335 IPR020557 Fumarate lyase, conserved site M4S28_16335 IPR024083 Fumarase/histidase, N-terminal M4S28_16335 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase M4S28_16335 IPR009049 Argininosuccinate lyase M4S28_16335 IPR029419 Argininosuccinate lyase, C-terminal M4S28_16335 IPR000362 Fumarate lyase family M4S28_16340 IPR001518 Argininosuccinate synthase M4S28_16340 IPR018223 Argininosuccinate synthase, conserved site M4S28_16340 IPR023434 Argininosuccinate synthase, type 1 subfamily M4S28_16340 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body M4S28_16340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_16345 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic M4S28_16345 IPR036393 Acetylglutamate kinase-like superfamily M4S28_16345 IPR004662 Acetylglutamate kinase family M4S28_16345 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_16345 IPR037528 Acetylglutamate kinase ArgB M4S28_16350 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site M4S28_16350 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 M4S28_16350 IPR036291 NAD(P)-binding domain superfamily M4S28_16350 IPR000534 Semialdehyde dehydrogenase, NAD-binding M4S28_16350 IPR012280 Semialdehyde dehydrogenase, dimerisation domain M4S28_16355 IPR010169 Acetylornithine deacetylase ArgE M4S28_16355 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M4S28_16355 IPR036264 Bacterial exopeptidase dimerisation domain M4S28_16355 IPR002933 Peptidase M20 M4S28_16355 IPR011650 Peptidase M20, dimerisation domain M4S28_16360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_16360 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site M4S28_16360 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type M4S28_16360 IPR021135 Phosphoenolpyruvate carboxylase M4S28_16360 IPR033129 Phosphoenolpyruvate carboxylase, His active site M4S28_16370 IPR004620 5,10-methylenetetrahydrofolate reductase M4S28_16370 IPR003171 Methylenetetrahydrofolate reductase M4S28_16370 IPR029041 FAD-linked oxidoreductase-like M4S28_16375 IPR019811 Homoserine dehydrogenase, conserved site M4S28_16375 IPR001342 Homoserine dehydrogenase, catalytic M4S28_16375 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I M4S28_16375 IPR018042 Aspartate kinase, conserved site M4S28_16375 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding M4S28_16375 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_16375 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain M4S28_16375 IPR036393 Acetylglutamate kinase-like superfamily M4S28_16375 IPR036291 NAD(P)-binding domain superfamily M4S28_16375 IPR001341 Aspartate kinase M4S28_16380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_16380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_16380 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_16380 IPR011821 O-succinylhomoserine (thiol)-lyase M4S28_16380 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme M4S28_16385 IPR010985 Ribbon-helix-helix M4S28_16385 IPR023453 Methionine repressor MetJ domain superfamily M4S28_16385 IPR002084 Methionine repressor MetJ M4S28_16390 IPR036291 NAD(P)-binding domain superfamily M4S28_16390 IPR001891 Malic oxidoreductase M4S28_16390 IPR012302 Malic enzyme, NAD-binding M4S28_16390 IPR037062 Malic enzyme, N-terminal domain superfamily M4S28_16390 IPR015884 Malic enzyme, conserved site M4S28_16390 IPR012301 Malic enzyme, N-terminal domain M4S28_16395 IPR042105 Ribosomal protein L31 superfamily M4S28_16395 IPR027491 Ribosomal protein L31 type A M4S28_16395 IPR002150 Ribosomal protein L31 M4S28_16395 IPR034704 L28p-like M4S28_16400 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_16400 IPR011545 DEAD/DEAH box helicase domain M4S28_16400 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain M4S28_16400 IPR041236 Primosomal protein N, C-terminal domain M4S28_16400 IPR001650 Helicase, C-terminal M4S28_16400 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily M4S28_16400 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16400 IPR005259 Primosomal protein N' M4S28_16400 IPR041222 Primosomal protein N', 3' DNA-binding domain M4S28_16405 IPR028082 Periplasmic binding protein-like I M4S28_16405 IPR000843 LacI-type HTH domain M4S28_16405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_16415 IPR022281 ATP-dependent protease, HslV subunit M4S28_16415 IPR023333 Proteasome B-type subunit M4S28_16415 IPR001353 Proteasome, subunit alpha/beta M4S28_16415 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_16420 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16420 IPR004491 Heat shock protein HslU M4S28_16420 IPR019489 Clp ATPase, C-terminal M4S28_16420 IPR003959 ATPase, AAA-type, core M4S28_16420 IPR003593 AAA+ ATPase domain M4S28_16425 IPR000537 UbiA prenyltransferase family M4S28_16425 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase M4S28_16425 IPR026046 UbiA prenyltransferase domain containing protein 1 M4S28_16430 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M4S28_16430 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria M4S28_16430 IPR010203 Regulator of ribonuclease activity A M4S28_16430 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M4S28_16470 IPR036259 MFS transporter superfamily M4S28_16470 IPR020846 Major facilitator superfamily domain M4S28_16470 IPR011701 Major facilitator superfamily M4S28_16470 IPR004812 Drug resistance transporter Bcr/CmlA subfamily M4S28_16470 IPR004734 Multidrug resistance protein M4S28_16480 IPR020449 Transcription regulator HTH, AraC- type M4S28_16480 IPR011256 Regulatory factor, effector binding domain superfamily M4S28_16480 IPR009057 Homeobox-like domain superfamily M4S28_16480 IPR018060 DNA binding HTH domain, AraC-type M4S28_16485 IPR020449 Transcription regulator HTH, AraC- type M4S28_16485 IPR018062 HTH domain AraC-type, conserved site M4S28_16485 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_16485 IPR037923 Transcription regulator HTH-like M4S28_16485 IPR018060 DNA binding HTH domain, AraC-type M4S28_16485 IPR009057 Homeobox-like domain superfamily M4S28_16500 IPR037923 Transcription regulator HTH-like M4S28_16500 IPR018060 DNA binding HTH domain, AraC-type M4S28_16500 IPR018062 HTH domain AraC-type, conserved site M4S28_16500 IPR020449 Transcription regulator HTH, AraC- type M4S28_16500 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_16500 IPR009057 Homeobox-like domain superfamily M4S28_16530 IPR001279 Metallo-beta-lactamase M4S28_16530 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D M4S28_16530 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_16535 IPR033479 Double Cache domain 1 M4S28_16535 IPR003660 HAMP domain M4S28_16535 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_16540 IPR023767 Transcriptional regulator SgrR M4S28_16540 IPR000914 Solute-binding protein family 5 domain M4S28_16540 IPR039424 Solute-binding protein family 5 M4S28_16540 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M4S28_16545 IPR011761 ATP-grasp fold M4S28_16545 IPR013651 ATP-grasp fold, RimK-type M4S28_16545 IPR013815 ATP-grasp fold, subdomain 1 M4S28_16545 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M4S28_16545 IPR041107 RimK, PreATP-grasp domain M4S28_16545 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M4S28_16550 IPR013815 ATP-grasp fold, subdomain 1 M4S28_16550 IPR021109 Aspartic peptidase domain superfamily M4S28_16550 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M4S28_16550 IPR041107 RimK, PreATP-grasp domain M4S28_16550 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M4S28_16550 IPR013651 ATP-grasp fold, RimK-type M4S28_16550 IPR011761 ATP-grasp fold M4S28_16555 IPR002559 Transposase, IS4-like M4S28_16555 IPR024473 Transposase, IS4, N-terminal M4S28_16555 IPR012337 Ribonuclease H-like superfamily M4S28_16575 IPR006061 Solute-binding family 1, conserved site M4S28_16575 IPR006059 Bacterial extracellular solute-binding protein M4S28_16580 IPR035906 MetI-like superfamily M4S28_16580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_16585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_16585 IPR035906 MetI-like superfamily M4S28_16585 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE M4S28_16590 IPR017871 ABC transporter, conserved site M4S28_16590 IPR003593 AAA+ ATPase domain M4S28_16590 IPR003439 ABC transporter-like M4S28_16590 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC M4S28_16590 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16590 IPR040582 MalK, OB fold domain M4S28_16590 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_16595 IPR030395 Glycerophosphodiester phosphodiesterase domain M4S28_16595 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily M4S28_16615 IPR000683 Oxidoreductase, N-terminal M4S28_16615 IPR036291 NAD(P)-binding domain superfamily M4S28_16625 IPR011901 Glutaredoxin-2 M4S28_16625 IPR004045 Glutathione S-transferase, N-terminal M4S28_16625 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_16625 IPR007494 Glutaredoxin 2, C-terminal M4S28_16625 IPR011767 Glutaredoxin active site M4S28_16625 IPR036249 Thioredoxin-like superfamily M4S28_16630 IPR005177 Bifunctional kinase-pyrophosphorylase M4S28_16630 IPR026530 Phosphoenolpyruvate synthase regulatory protein M4S28_16635 IPR013815 ATP-grasp fold, subdomain 1 M4S28_16635 IPR023151 PEP-utilising enzyme, conserved site M4S28_16635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_16635 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding M4S28_16635 IPR036637 Phosphohistidine domain superfamily M4S28_16635 IPR008279 PEP-utilising enzyme, mobile domain M4S28_16635 IPR040442 Pyruvate kinase-like domain superfamily M4S28_16635 IPR006319 Phosphoenolpyruvate synthase M4S28_16635 IPR018274 PEP-utilising enzyme, active site M4S28_16635 IPR000121 PEP-utilising enzyme, C-terminal M4S28_16645 IPR002528 Multi antimicrobial extrusion protein M4S28_16650 IPR039446 Transcriptional regulator DauR-like M4S28_16650 IPR039445 Transcriptional regulator DauR-like, HTH domain M4S28_16650 IPR013559 YheO-like M4S28_16655 IPR006175 YjgF/YER057c/UK114 family M4S28_16655 IPR035959 RutC-like superfamily M4S28_16655 IPR019897 RidA, conserved site M4S28_16655 IPR006056 RidA family M4S28_16660 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_16660 IPR001991 Sodium:dicarboxylate symporter M4S28_16665 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M4S28_16665 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily M4S28_16665 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_16665 IPR023753 FAD/NAD(P)-binding domain M4S28_16675 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_16675 IPR000917 Sulfatase, N-terminal M4S28_16675 IPR040423 Phosphoethanolamine transferase M4S28_16730 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY M4S28_16730 IPR029028 Alpha/beta knot methyltransferases M4S28_16730 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_16770 IPR003740 Uncharacterised membrane protein YitT M4S28_16800 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB M4S28_16800 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M4S28_16810 IPR005119 LysR, substrate-binding M4S28_16810 IPR000847 Transcription regulator HTH, LysR M4S28_16810 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16810 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16815 IPR016040 NAD(P)-binding domain M4S28_16815 IPR036291 NAD(P)-binding domain superfamily M4S28_16825 IPR036291 NAD(P)-binding domain superfamily M4S28_16825 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_16825 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_16830 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16830 IPR002577 Helix-turn-helix, HxlR type M4S28_16830 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16835 IPR005119 LysR, substrate-binding M4S28_16835 IPR000847 Transcription regulator HTH, LysR M4S28_16835 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16835 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16840 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_16840 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_16840 IPR036291 NAD(P)-binding domain superfamily M4S28_16850 IPR005618 Outer membrane protein, OmpW M4S28_16850 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M4S28_16855 IPR005836 ADP-glucose pyrophosphorylase, conserved site M4S28_16855 IPR011831 Glucose-1-phosphate adenylyltransferase M4S28_16855 IPR011004 Trimeric LpxA-like superfamily M4S28_16855 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial M4S28_16855 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_16855 IPR005835 Nucleotidyl transferase domain M4S28_16860 IPR018385 C4-dicarboxylate anaerobic carrier-like M4S28_16885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_16885 IPR035906 MetI-like superfamily M4S28_16885 IPR005769 ABC transporter, permease PhnE/PtxC M4S28_16890 IPR035906 MetI-like superfamily M4S28_16890 IPR005769 ABC transporter, permease PhnE/PtxC M4S28_16890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_16895 IPR003593 AAA+ ATPase domain M4S28_16895 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16895 IPR012693 ABC transporter, phosphonate import, PhnC M4S28_16895 IPR017871 ABC transporter, conserved site M4S28_16895 IPR003439 ABC transporter-like M4S28_16910 IPR002197 DNA binding HTH domain, Fis-type M4S28_16910 IPR011006 CheY-like superfamily M4S28_16910 IPR003593 AAA+ ATPase domain M4S28_16910 IPR025944 Sigma-54 interaction domain, conserved site M4S28_16910 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_16910 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_16910 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_16910 IPR001789 Signal transduction response regulator, receiver domain M4S28_16910 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_16910 IPR009057 Homeobox-like domain superfamily M4S28_16915 IPR029151 Periplasmic sensor-like domain superfamily M4S28_16915 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_16915 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_16915 IPR005467 Histidine kinase domain M4S28_16915 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_16915 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_16915 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M4S28_16915 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_16915 IPR033479 Double Cache domain 1 M4S28_16920 IPR034603 Dipeptide epimerase M4S28_16920 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain M4S28_16920 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M4S28_16920 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site M4S28_16920 IPR029065 Enolase C-terminal domain-like M4S28_16920 IPR029017 Enolase-like, N-terminal M4S28_16920 IPR036849 Enolase-like, C-terminal domain superfamily M4S28_16930 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16930 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16930 IPR000847 Transcription regulator HTH, LysR M4S28_16930 IPR005119 LysR, substrate-binding M4S28_16930 IPR037414 Transcriptional activator protein LysR, PBP2 domain M4S28_16945 IPR033480 Single Cache domain 2 M4S28_16945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_16945 IPR004090 Chemotaxis methyl-accepting receptor M4S28_16945 IPR000727 Target SNARE coiled-coil homology domain M4S28_16945 IPR003660 HAMP domain M4S28_16955 IPR005119 LysR, substrate-binding M4S28_16955 IPR000847 Transcription regulator HTH, LysR M4S28_16955 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16955 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16965 IPR000727 Target SNARE coiled-coil homology domain M4S28_16965 IPR029151 Periplasmic sensor-like domain superfamily M4S28_16965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_16965 IPR003660 HAMP domain M4S28_16965 IPR033479 Double Cache domain 1 M4S28_16965 IPR004090 Chemotaxis methyl-accepting receptor M4S28_16980 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16980 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16980 IPR004839 Aminotransferase, class I/classII M4S28_16980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_16980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_16980 IPR000524 Transcription regulator HTH, GntR M4S28_16980 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_16985 IPR012337 Ribonuclease H-like superfamily M4S28_16985 IPR024473 Transposase, IS4, N-terminal M4S28_16985 IPR002559 Transposase, IS4-like M4S28_16995 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_16995 IPR005119 LysR, substrate-binding M4S28_16995 IPR000847 Transcription regulator HTH, LysR M4S28_16995 IPR023746 Transcription regulator HTH, YidZ M4S28_16995 IPR036390 Winged helix DNA-binding domain superfamily M4S28_16995 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M4S28_17000 IPR005829 Sugar transporter, conserved site M4S28_17000 IPR023697 Multidrug resistance protein MdtL M4S28_17000 IPR036259 MFS transporter superfamily M4S28_17000 IPR020846 Major facilitator superfamily domain M4S28_17000 IPR011701 Major facilitator superfamily M4S28_17005 IPR013059 Tryptophan/tyrosine transporter M4S28_17005 IPR018227 Amino acid/polyamine transporter 2 M4S28_17010 IPR036259 MFS transporter superfamily M4S28_17010 IPR004740 Nucleoside:H+ symporter M4S28_17010 IPR020846 Major facilitator superfamily domain M4S28_17015 IPR036705 ADP-ribosylation/Crystallin J1 superfamily M4S28_17015 IPR005502 ADP-ribosylation/Crystallin J1 M4S28_17020 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_17020 IPR011611 Carbohydrate kinase PfkB M4S28_17020 IPR002139 Ribokinase/fructokinase M4S28_17020 IPR029056 Ribokinase-like M4S28_17025 IPR011701 Major facilitator superfamily M4S28_17025 IPR020846 Major facilitator superfamily domain M4S28_17025 IPR036259 MFS transporter superfamily M4S28_17025 IPR004741 Oxalate/formate antiporter family transporter M4S28_17030 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17030 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17030 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_17030 IPR000524 Transcription regulator HTH, GntR M4S28_17030 IPR011663 UbiC transcription regulator-associated M4S28_17035 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17035 IPR000835 MarR-type HTH domain M4S28_17035 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17040 IPR019953 Organic hydroperoxide resistance protein famiy M4S28_17040 IPR015946 K homology domain-like, alpha/beta M4S28_17040 IPR003718 OsmC/Ohr family M4S28_17040 IPR036102 OsmC/Ohr superfamily M4S28_17050 IPR015590 Aldehyde dehydrogenase domain M4S28_17050 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_17050 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_17050 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_17050 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_17050 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_17050 IPR011264 Betaine aldehyde dehydrogenase M4S28_17060 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M4S28_17060 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_17060 IPR000727 Target SNARE coiled-coil homology domain M4S28_17060 IPR004090 Chemotaxis methyl-accepting receptor M4S28_17060 IPR003660 HAMP domain M4S28_17075 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_17075 IPR006327 Phosphotransferase system, fructose IIC component M4S28_17080 IPR036095 PTS system IIB component-like superfamily M4S28_17080 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_17080 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M4S28_17080 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_17090 IPR020449 Transcription regulator HTH, AraC- type M4S28_17090 IPR018062 HTH domain AraC-type, conserved site M4S28_17090 IPR018060 DNA binding HTH domain, AraC-type M4S28_17090 IPR009057 Homeobox-like domain superfamily M4S28_17095 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_17095 IPR016152 Phosphotransferase/anion transporter M4S28_17095 IPR002178 PTS EIIA type-2 domain M4S28_17095 IPR036095 PTS system IIB component-like superfamily M4S28_17095 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_17095 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_17095 IPR004715 Phosphotransferase system, IIA component fructose subfamily M4S28_17095 IPR003352 Phosphotransferase system, EIIC M4S28_17095 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M4S28_17095 IPR006327 Phosphotransferase system, fructose IIC component M4S28_17100 IPR011051 RmlC-like cupin domain superfamily M4S28_17100 IPR001250 Mannose-6-phosphate isomerase, type I M4S28_17100 IPR016305 Mannose-6-phosphate isomerase M4S28_17100 IPR018050 Phosphomannose isomerase, type I, conserved site M4S28_17100 IPR014710 RmlC-like jelly roll fold M4S28_17110 IPR006327 Phosphotransferase system, fructose IIC component M4S28_17110 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_17115 IPR005116 Transport-associated OB, type 1 M4S28_17115 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_17115 IPR040582 MalK, OB fold domain M4S28_17115 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17115 IPR003593 AAA+ ATPase domain M4S28_17115 IPR017871 ABC transporter, conserved site M4S28_17115 IPR003439 ABC transporter-like M4S28_17120 IPR036412 HAD-like superfamily M4S28_17120 IPR006439 HAD hydrolase, subfamily IA M4S28_17120 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_17120 IPR023214 HAD superfamily M4S28_17120 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_17120 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic M4S28_17120 IPR037512 Phosphoglycolate phosphatase, prokaryotic M4S28_17135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_17135 IPR035906 MetI-like superfamily M4S28_17140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_17140 IPR035906 MetI-like superfamily M4S28_17145 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17145 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17145 IPR005119 LysR, substrate-binding M4S28_17145 IPR000847 Transcription regulator HTH, LysR M4S28_17150 IPR023765 Solute-binding protein family 5, conserved site M4S28_17150 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_17150 IPR039424 Solute-binding protein family 5 M4S28_17150 IPR000914 Solute-binding protein family 5 domain M4S28_17155 IPR000834 Peptidase M14, carboxypeptidase A M4S28_17165 IPR032710 NTF2-like domain superfamily M4S28_17165 IPR023006 Uncharacterised protein family UPF0225 M4S28_17165 IPR004027 SEC-C motif M4S28_17170 IPR000390 Small multidrug resistance protein family M4S28_17175 IPR014183 Alcohol dehydrogenase class III M4S28_17175 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_17175 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_17175 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M4S28_17175 IPR011032 GroES-like superfamily M4S28_17175 IPR036291 NAD(P)-binding domain superfamily M4S28_17175 IPR020843 Polyketide synthase, enoylreductase domain M4S28_17180 IPR014186 S-formylglutathione hydrolase M4S28_17180 IPR029058 Alpha/Beta hydrolase fold M4S28_17180 IPR000801 Putative esterase M4S28_17195 IPR000086 NUDIX hydrolase domain M4S28_17195 IPR020084 NUDIX hydrolase, conserved site M4S28_17195 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_17195 IPR036412 HAD-like superfamily M4S28_17195 IPR006357 HAD-superfamily hydrolase, subfamily IIA M4S28_17195 IPR023214 HAD superfamily M4S28_17195 IPR020476 NUDIX hydrolase M4S28_17200 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_17200 IPR015590 Aldehyde dehydrogenase domain M4S28_17200 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_17200 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_17200 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_17200 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_17205 IPR003593 AAA+ ATPase domain M4S28_17205 IPR025944 Sigma-54 interaction domain, conserved site M4S28_17205 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_17205 IPR003018 GAF domain M4S28_17205 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_17205 IPR029016 GAF-like domain superfamily M4S28_17205 IPR009057 Homeobox-like domain superfamily M4S28_17205 IPR002197 DNA binding HTH domain, Fis-type M4S28_17205 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17205 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_17210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_17210 IPR003660 HAMP domain M4S28_17215 IPR005119 LysR, substrate-binding M4S28_17215 IPR000847 Transcription regulator HTH, LysR M4S28_17215 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17215 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17225 IPR001387 Cro/C1-type helix-turn-helix domain M4S28_17225 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_17260 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M4S28_17260 IPR036165 YefM-like superfamily M4S28_17265 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M4S28_17265 IPR009614 Toxin YoeB M4S28_17275 IPR004668 Anaerobic c4-dicarboxylate membrane transporter M4S28_17280 IPR036412 HAD-like superfamily M4S28_17280 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_17280 IPR023214 HAD superfamily M4S28_17280 IPR006439 HAD hydrolase, subfamily IA M4S28_17280 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_17285 IPR003607 HD/PDEase domain M4S28_17285 IPR006674 HD domain M4S28_17305 IPR016167 FAD-binding, type PCMH, subdomain 1 M4S28_17305 IPR005107 CO dehydrogenase flavoprotein, C-terminal M4S28_17305 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily M4S28_17305 IPR016166 FAD-binding domain, PCMH-type M4S28_17305 IPR036318 FAD-binding, type PCMH-like superfamily M4S28_17305 IPR016169 FAD-binding, type PCMH, subdomain 2 M4S28_17305 IPR002346 Molybdopterin dehydrogenase, FAD-binding M4S28_17310 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead M4S28_17310 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily M4S28_17310 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding M4S28_17310 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily M4S28_17320 IPR032466 Metal-dependent hydrolase M4S28_17320 IPR006680 Amidohydrolase-related M4S28_17320 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_17320 IPR014311 Guanine deaminase M4S28_17330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_17330 IPR038722 Ner, winged helix-turn-helix DNA-binding domain M4S28_17335 IPR003314 Mu-type HTH domain M4S28_17335 IPR015126 Mu DNA binding, I gamma subdomain M4S28_17335 IPR009061 Putative DNA-binding domain superfamily M4S28_17335 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17335 IPR009004 Transposase, Mu, C-terminal M4S28_17335 IPR015378 Transposase-like, Mu, C-terminal M4S28_17335 IPR036397 Ribonuclease H superfamily M4S28_17335 IPR009057 Homeobox-like domain superfamily M4S28_17335 IPR004189 Bacteriophage Mu, transposase M4S28_17335 IPR012337 Ribonuclease H-like superfamily M4S28_17340 IPR009084 B transposition protein, C-terminal M4S28_17340 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17340 IPR036733 B transposition protein, C-terminal domain superfamily M4S28_17340 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_17340 IPR003593 AAA+ ATPase domain M4S28_17340 IPR001387 Cro/C1-type helix-turn-helix domain M4S28_17410 IPR009057 Homeobox-like domain superfamily M4S28_17410 IPR014875 Mor transcription activator M4S28_17440 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17440 IPR013668 Ribonuclease R winged-helix domain M4S28_17445 IPR021874 Bacteriophage Mu, Gp27 M4S28_17455 IPR012036 Bacteriophage Mu, Gp28 M4S28_17455 IPR004921 Terminase large subunit, T4likevirus-type M4S28_17465 IPR009279 Protein of unknown function DUF935 M4S28_17480 IPR018774 Bacteriophage Mu, GpT M4S28_17500 IPR009752 Bacteriophage Mu, Gp36 M4S28_17520 IPR007067 Tail sheath protein M4S28_17520 IPR035089 Tail sheath protein, subtilisin-like domain M4S28_17520 IPR020287 Tail sheath protein, C-terminal domain M4S28_17525 IPR019596 Bacteriophage Mu, GpM, tail tube M4S28_17550 IPR014462 Phage-associated protein Gp45 M4S28_17550 IPR013046 Phage baseplate assembly protein V/Gp45 M4S28_17565 IPR018755 Bacteriophage Mu-like, Gp48 M4S28_17585 IPR003779 Carboxymuconolactone decarboxylase-like M4S28_17585 IPR012788 4-carboxymuconolactone decarboxylase M4S28_17585 IPR029032 AhpD-like M4S28_17590 IPR009061 Putative DNA-binding domain superfamily M4S28_17590 IPR000551 MerR-type HTH domain M4S28_17605 IPR036259 MFS transporter superfamily M4S28_17605 IPR011701 Major facilitator superfamily M4S28_17605 IPR020846 Major facilitator superfamily domain M4S28_17605 IPR005828 Major facilitator, sugar transporter-like M4S28_17605 IPR023692 Multidrug resistance protein MdtG M4S28_17605 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG M4S28_17615 IPR007344 GrpB/Dephospho-CoA kinase M4S28_17630 IPR023525 Ureidoglycolate lyase, bacterial M4S28_17630 IPR007247 Ureidoglycolate lyase M4S28_17630 IPR024060 Ureidoglycolate lyase domain superfamily M4S28_17630 IPR011051 RmlC-like cupin domain superfamily M4S28_17635 IPR008979 Galactose-binding-like domain superfamily M4S28_17635 IPR015908 Allantoicase domain M4S28_17635 IPR005164 Allantoicase M4S28_17640 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 M4S28_17640 IPR002042 Uricase M4S28_17640 IPR019842 Uricase, conserved site M4S28_17640 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase M4S28_17640 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily M4S28_17650 IPR000895 Transthyretin/hydroxyisourate hydrolase M4S28_17650 IPR023416 Transthyretin/hydroxyisourate hydrolase domain M4S28_17650 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily M4S28_17650 IPR023419 Transthyretin, conserved site M4S28_17650 IPR014306 Hydroxyisourate hydrolase M4S28_17650 IPR023418 Transthyretin, thyroxine binding site M4S28_17655 IPR006043 Xanthine/uracil/vitamin C permease M4S28_17655 IPR026033 Azaguanine-like transporters M4S28_17660 IPR017588 Uric acid permease UacT-like M4S28_17660 IPR006042 Xanthine/uracil permease M4S28_17660 IPR006043 Xanthine/uracil/vitamin C permease M4S28_17665 IPR006680 Amidohydrolase-related M4S28_17665 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_17665 IPR032466 Metal-dependent hydrolase M4S28_17680 IPR006680 Amidohydrolase-related M4S28_17680 IPR023512 Deaminase MtaD/DadD M4S28_17680 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_17680 IPR032466 Metal-dependent hydrolase M4S28_17690 IPR039760 MOFRL domain-containing protein M4S28_17690 IPR025286 MOFRL-associated domain M4S28_17690 IPR007835 MOFRL domain M4S28_17690 IPR038614 Glycerate kinase, N-terminal domain superfamily M4S28_17690 IPR037035 Glycerate kinase-like, C-terminal domain superfamily M4S28_17695 IPR006398 2-hydroxy-3-oxopropionate reductase M4S28_17695 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain M4S28_17695 IPR036291 NAD(P)-binding domain superfamily M4S28_17695 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site M4S28_17695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_17695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_17695 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M4S28_17695 IPR015815 3-hydroxyisobutyrate dehydrogenase-related M4S28_17700 IPR013022 Xylose isomerase-like, TIM barrel domain M4S28_17700 IPR036237 Xylose isomerase-like superfamily M4S28_17700 IPR026040 Hydroxypyruvate isomerase-like M4S28_17700 IPR017643 Hydroxypyruvate isomerase M4S28_17705 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_17705 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_17705 IPR012000 Thiamine pyrophosphate enzyme, central domain M4S28_17705 IPR029061 Thiamin diphosphate-binding fold M4S28_17705 IPR006397 Glyoxylate carboligase M4S28_17705 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_17710 IPR001465 Malate synthase M4S28_17710 IPR011076 Malate synthase-like superfamily M4S28_17710 IPR006252 Malate synthase A M4S28_17710 IPR019830 Malate synthase, conserved site M4S28_17720 IPR032808 DoxX family M4S28_17725 IPR000835 MarR-type HTH domain M4S28_17725 IPR023187 Transcriptional regulator MarR-type, conserved site M4S28_17725 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17725 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17755 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17755 IPR000847 Transcription regulator HTH, LysR M4S28_17755 IPR005119 LysR, substrate-binding M4S28_17755 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17760 IPR000620 EamA domain M4S28_17805 IPR004846 Type II/III secretion system M4S28_17805 IPR014004 Transport-associated and nodulation domain, bacteria M4S28_17805 IPR001775 GspD/PilQ family M4S28_17805 IPR007055 BON domain M4S28_17805 IPR032789 Pilus formation protein, N-terminal M4S28_17820 IPR001482 Type II/IV secretion system protein M4S28_17820 IPR022399 Helicase/secretion neighbourhood ATPase M4S28_17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17875 IPR003834 Cytochrome C biogenesis protein, transmembrane domain M4S28_17875 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M4S28_17875 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M4S28_17875 IPR022910 Thiol:disulphide interchange protein DsbD M4S28_17875 IPR036249 Thioredoxin-like superfamily M4S28_17875 IPR013766 Thioredoxin domain M4S28_17875 IPR035671 DsbD gamma M4S28_17890 IPR009875 PilZ domain M4S28_17890 IPR012349 FMN-binding split barrel M4S28_17890 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal M4S28_17895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M4S28_17895 IPR020568 Ribosomal protein S5 domain 2-type fold M4S28_17895 IPR041699 Lon protease, AAA domain M4S28_17895 IPR008269 Peptidase S16, Lon proteolytic domain M4S28_17895 IPR027065 Lon protease M4S28_17905 IPR003593 AAA+ ATPase domain M4S28_17905 IPR003439 ABC transporter-like M4S28_17905 IPR017871 ABC transporter, conserved site M4S28_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17905 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_17920 IPR026881 WYL domain M4S28_17920 IPR036390 Winged helix DNA-binding domain superfamily M4S28_17920 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17920 IPR028349 Protein PafC M4S28_17920 IPR013196 Helix-turn-helix, type 11 M4S28_17920 IPR001034 DeoR-type HTH domain M4S28_17925 IPR028082 Periplasmic binding protein-like I M4S28_17925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_17925 IPR000843 LacI-type HTH domain M4S28_17925 IPR023588 Transcription regulator HTH, PurR M4S28_17935 IPR014718 Glycoside hydrolase-type carbohydrate-binding M4S28_17935 IPR037480 YihR-like M4S28_17935 IPR011013 Galactose mutarotase-like domain superfamily M4S28_17935 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase M4S28_17940 IPR008928 Six-hairpin glycosidase superfamily M4S28_17940 IPR012341 Six-hairpin glycosidase-like superfamily M4S28_17940 IPR009342 Putative carbohydrate binding domain M4S28_17940 IPR011013 Galactose mutarotase-like domain superfamily M4S28_17940 IPR033432 Glycosyl hydrolase 36, catalytic domain M4S28_17940 IPR037825 Cellobiose phosphorylase, N-terminal M4S28_17940 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily M4S28_17940 IPR010383 Glycosyl hydrolase 94 M4S28_17945 IPR005116 Transport-associated OB, type 1 M4S28_17945 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_17945 IPR040582 MalK, OB fold domain M4S28_17945 IPR017871 ABC transporter, conserved site M4S28_17945 IPR003439 ABC transporter-like M4S28_17945 IPR003593 AAA+ ATPase domain M4S28_17945 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_17950 IPR001360 Glycoside hydrolase family 1 M4S28_17950 IPR018120 Glycoside hydrolase family 1, active site M4S28_17950 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase M4S28_17950 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M4S28_17950 IPR017853 Glycoside hydrolase superfamily M4S28_17955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_17955 IPR035906 MetI-like superfamily M4S28_17960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_17960 IPR035906 MetI-like superfamily M4S28_17970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_17970 IPR000843 LacI-type HTH domain M4S28_17970 IPR028082 Periplasmic binding protein-like I M4S28_17975 IPR003660 HAMP domain M4S28_17975 IPR004090 Chemotaxis methyl-accepting receptor M4S28_17975 IPR033480 Single Cache domain 2 M4S28_17975 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_17990 IPR002471 Peptidase S9, serine active site M4S28_17990 IPR029058 Alpha/Beta hydrolase fold M4S28_17990 IPR023302 Peptidase S9A, N-terminal domain M4S28_17990 IPR002470 Peptidase S9A, prolyl oligopeptidase M4S28_17990 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain M4S28_17995 IPR005119 LysR, substrate-binding M4S28_17995 IPR000847 Transcription regulator HTH, LysR M4S28_17995 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_17995 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18000 IPR003804 L-lactate permease M4S28_18005 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site M4S28_18005 IPR020920 L-lactate dehydrogenase, bacterial M4S28_18005 IPR000262 FMN-dependent dehydrogenase M4S28_18005 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent M4S28_18005 IPR013785 Aldolase-type TIM barrel M4S28_18005 IPR037396 FMN hydroxy acid dehydrogenase domain M4S28_18020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_18020 IPR035906 MetI-like superfamily M4S28_18025 IPR000914 Solute-binding protein family 5 domain M4S28_18025 IPR023765 Solute-binding protein family 5, conserved site M4S28_18025 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_18025 IPR039424 Solute-binding protein family 5 M4S28_18030 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_18030 IPR017871 ABC transporter, conserved site M4S28_18030 IPR003439 ABC transporter-like M4S28_18030 IPR003593 AAA+ ATPase domain M4S28_18030 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18035 IPR003439 ABC transporter-like M4S28_18035 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18035 IPR017871 ABC transporter, conserved site M4S28_18035 IPR003593 AAA+ ATPase domain M4S28_18035 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_18040 IPR002528 Multi antimicrobial extrusion protein M4S28_18045 IPR002491 ABC transporter periplasmic binding domain M4S28_18045 IPR009057 Homeobox-like domain superfamily M4S28_18045 IPR018060 DNA binding HTH domain, AraC-type M4S28_18045 IPR018062 HTH domain AraC-type, conserved site M4S28_18045 IPR020449 Transcription regulator HTH, AraC- type M4S28_18050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_18050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_18050 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_18050 IPR004839 Aminotransferase, class I/classII M4S28_18065 IPR036873 Rhodanese-like domain superfamily M4S28_18065 IPR020936 Uncharacterised protein family UPF0176 M4S28_18065 IPR040503 UPF0176, acylphosphatase-like domain M4S28_18065 IPR001763 Rhodanese-like domain M4S28_18085 IPR001250 Mannose-6-phosphate isomerase, type I M4S28_18085 IPR011051 RmlC-like cupin domain superfamily M4S28_18085 IPR014710 RmlC-like jelly roll fold M4S28_18085 IPR018050 Phosphomannose isomerase, type I, conserved site M4S28_18085 IPR016305 Mannose-6-phosphate isomerase M4S28_18090 IPR011701 Major facilitator superfamily M4S28_18090 IPR020846 Major facilitator superfamily domain M4S28_18090 IPR036259 MFS transporter superfamily M4S28_18090 IPR021159 Glycerate/sugar phosphate transporter, conserved site M4S28_18090 IPR000849 Sugar phosphate transporter M4S28_18095 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M4S28_18095 IPR005467 Histidine kinase domain M4S28_18095 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18095 IPR007895 MASE1 M4S28_18100 IPR000792 Transcription regulator LuxR, C-terminal M4S28_18100 IPR011006 CheY-like superfamily M4S28_18100 IPR001789 Signal transduction response regulator, receiver domain M4S28_18100 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_18105 IPR011701 Major facilitator superfamily M4S28_18105 IPR000849 Sugar phosphate transporter M4S28_18105 IPR021159 Glycerate/sugar phosphate transporter, conserved site M4S28_18105 IPR036259 MFS transporter superfamily M4S28_18105 IPR020846 Major facilitator superfamily domain M4S28_18115 IPR029787 Nucleotide cyclase M4S28_18115 IPR005330 MHYT domain M4S28_18115 IPR000160 GGDEF domain M4S28_18115 IPR035919 EAL domain superfamily M4S28_18115 IPR001633 EAL domain M4S28_18125 IPR008778 Pirin, C-terminal domain M4S28_18125 IPR011051 RmlC-like cupin domain superfamily M4S28_18125 IPR014710 RmlC-like jelly roll fold M4S28_18125 IPR003829 Pirin, N-terminal domain M4S28_18125 IPR012093 Pirin M4S28_18130 IPR011051 RmlC-like cupin domain superfamily M4S28_18130 IPR014710 RmlC-like jelly roll fold M4S28_18130 IPR009664 Pyrimidine/purine nucleoside phosphorylase M4S28_18140 IPR013540 Chitinase A N-terminal M4S28_18140 IPR002126 Cadherin-like M4S28_18140 IPR003610 Carbohydrate-binding module family 5/12 M4S28_18140 IPR036573 Carbohydrate-binding module superfamily 5/12 M4S28_18140 IPR011583 Chitinase II M4S28_18140 IPR029070 Chitinase insertion domain superfamily M4S28_18140 IPR001223 Glycoside hydrolase family 18, catalytic domain M4S28_18140 IPR022409 PKD/Chitinase domain M4S28_18140 IPR014756 Immunoglobulin E-set M4S28_18140 IPR013783 Immunoglobulin-like fold M4S28_18140 IPR017853 Glycoside hydrolase superfamily M4S28_18140 IPR001579 Glycoside hydrolase, chitinase active site M4S28_18145 IPR000073 Alpha/beta hydrolase fold-1 M4S28_18145 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase M4S28_18145 IPR029058 Alpha/Beta hydrolase fold M4S28_18170 IPR032783 AraC-type transcription regulator, ligand-binding domain M4S28_18170 IPR018062 HTH domain AraC-type, conserved site M4S28_18170 IPR018060 DNA binding HTH domain, AraC-type M4S28_18170 IPR009057 Homeobox-like domain superfamily M4S28_18190 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M4S28_18190 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein M4S28_18195 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_18200 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_18210 IPR004680 Citrate transporter-like domain M4S28_18220 IPR023546 Methylated-DNA--protein-cysteine methyltransferase M4S28_18220 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18220 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily M4S28_18220 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain M4S28_18220 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain M4S28_18220 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding M4S28_18220 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site M4S28_18225 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal M4S28_18225 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal M4S28_18225 IPR011257 DNA glycosylase M4S28_18225 IPR003265 HhH-GPD domain M4S28_18225 IPR000035 Alkylbase DNA glycosidase, conserved site M4S28_18225 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily M4S28_18235 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18235 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18235 IPR000847 Transcription regulator HTH, LysR M4S28_18235 IPR020890 Transcription regulator HTH, HdfR M4S28_18235 IPR005119 LysR, substrate-binding M4S28_18245 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase M4S28_18245 IPR004547 Glucosamine-6-phosphate isomerase M4S28_18245 IPR037171 NagB/RpiA transferase-like M4S28_18245 IPR018321 Glucosamine-6-phosphate isomerase, conserved site M4S28_18250 IPR007761 Mannitol repressor MtlR-like M4S28_18250 IPR038026 MtlR-like superfamily M4S28_18255 IPR036291 NAD(P)-binding domain superfamily M4S28_18255 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_18255 IPR023027 Mannitol dehydrogenase, conserved site M4S28_18255 IPR013118 Mannitol dehydrogenase, C-terminal M4S28_18255 IPR000669 Mannitol dehydrogenase M4S28_18255 IPR023028 Mannitol-1-phosphate 5-dehydrogenase M4S28_18255 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_18255 IPR013131 Mannitol dehydrogenase, N-terminal M4S28_18260 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_18260 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC M4S28_18260 IPR029503 Phosphotransferase system EIIB component, mannitol-specific M4S28_18260 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_18260 IPR016152 Phosphotransferase/anion transporter M4S28_18260 IPR002178 PTS EIIA type-2 domain M4S28_18260 IPR036095 PTS system IIB component-like superfamily M4S28_18260 IPR003352 Phosphotransferase system, EIIC M4S28_18260 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_18270 IPR033878 Nitroreductase NfsB-like M4S28_18270 IPR029479 Nitroreductase M4S28_18270 IPR000415 Nitroreductase-like M4S28_18280 IPR024935 Rubredoxin domain M4S28_18280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_18280 IPR024934 Rubredoxin-like domain M4S28_18280 IPR001279 Metallo-beta-lactamase M4S28_18280 IPR008254 Flavodoxin/nitric oxide synthase M4S28_18280 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin M4S28_18280 IPR029039 Flavoprotein-like superfamily M4S28_18280 IPR016440 Rubredoxin-oxygen oxidoreductase M4S28_18285 IPR041364 Rubredoxin binding domain M4S28_18285 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase M4S28_18285 IPR023753 FAD/NAD(P)-binding domain M4S28_18285 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_18290 IPR004445 Sodium/glutamate symport carrier protein GltS M4S28_18295 IPR021230 Protein of unknown function DUF2810 M4S28_18305 IPR037479 Tautomerase, MSAD family M4S28_18305 IPR014347 Tautomerase/MIF superfamily M4S28_18315 IPR039425 RNA polymerase sigma-70 like M4S28_18315 IPR014284 RNA polymerase sigma-70 like domain M4S28_18315 IPR007630 RNA polymerase sigma-70 region 4 M4S28_18315 IPR013325 RNA polymerase sigma factor, region 2 M4S28_18315 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_18315 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18315 IPR007627 RNA polymerase sigma-70 region 2 M4S28_18320 IPR011051 RmlC-like cupin domain superfamily M4S28_18320 IPR012807 Anti-sigma factor ChrR, putative M4S28_18320 IPR025979 ChrR-like cupin domain M4S28_18320 IPR014710 RmlC-like jelly roll fold M4S28_18330 IPR002081 Cryptochrome/DNA photolyase class 1 M4S28_18330 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily M4S28_18330 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain M4S28_18330 IPR006050 DNA photolyase, N-terminal M4S28_18330 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M4S28_18330 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily M4S28_18330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_18340 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_18340 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_18340 IPR036291 NAD(P)-binding domain superfamily M4S28_18345 IPR002937 Amine oxidase M4S28_18345 IPR014105 Carotenoid/retinoid oxidoreductase M4S28_18345 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_18355 IPR003333 Mycolic acid cyclopropane synthase M4S28_18355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_18380 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_18380 IPR036291 NAD(P)-binding domain superfamily M4S28_18385 IPR035979 RNA-binding domain superfamily M4S28_18385 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M4S28_18385 IPR000504 RNA recognition motif domain M4S28_18395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_18395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_18395 IPR004839 Aminotransferase, class I/classII M4S28_18395 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_18395 IPR027619 Putative C-S lyase M4S28_18410 IPR036878 Glucose permease domain IIB M4S28_18410 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M4S28_18410 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 M4S28_18410 IPR003352 Phosphotransferase system, EIIC M4S28_18410 IPR013013 Phosphotransferase system, EIIC component, type 1 M4S28_18410 IPR001996 Phosphotransferase system, IIB component, type 1 M4S28_18410 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component M4S28_18410 IPR011055 Duplicated hybrid motif M4S28_18440 IPR011649 KaiB domain M4S28_18440 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_18440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_18440 IPR023527 Adaptive-response sensory-kinase SasA M4S28_18440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_18440 IPR036249 Thioredoxin-like superfamily M4S28_18440 IPR005467 Histidine kinase domain M4S28_18445 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18445 IPR011006 CheY-like superfamily M4S28_18445 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_18445 IPR001789 Signal transduction response regulator, receiver domain M4S28_18445 IPR039420 Transcriptional regulatory protein WalR-like M4S28_18500 IPR005119 LysR, substrate-binding M4S28_18500 IPR000847 Transcription regulator HTH, LysR M4S28_18500 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18500 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18505 IPR036291 NAD(P)-binding domain superfamily M4S28_18505 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_18505 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_18510 IPR011701 Major facilitator superfamily M4S28_18510 IPR036259 MFS transporter superfamily M4S28_18510 IPR020846 Major facilitator superfamily domain M4S28_18515 IPR013785 Aldolase-type TIM barrel M4S28_18515 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M4S28_18525 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M4S28_18525 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M4S28_18525 IPR005665 Protein-export membrane protein SecF, bacterial M4S28_18525 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M4S28_18530 IPR027398 SecD export protein N-terminal TM domain M4S28_18530 IPR001036 Acriflavin resistance protein M4S28_18530 IPR005791 Protein translocase subunit SecD M4S28_18530 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M4S28_18530 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M4S28_18530 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M4S28_18540 IPR011765 Peptidase M16, N-terminal M4S28_18540 IPR007863 Peptidase M16, C-terminal M4S28_18540 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like M4S28_18540 IPR001431 Peptidase M16, zinc-binding site M4S28_18545 IPR011006 CheY-like superfamily M4S28_18545 IPR007492 LytTR DNA-binding domain M4S28_18545 IPR001789 Signal transduction response regulator, receiver domain M4S28_18550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18550 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M4S28_18550 IPR010559 Signal transduction histidine kinase, internal region M4S28_18550 IPR003018 GAF domain M4S28_18565 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E M4S28_18565 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type M4S28_18565 IPR025857 MacB-like periplasmic core domain M4S28_18565 IPR003838 ABC transporter permease protein domain M4S28_18570 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18570 IPR011924 Lipoprotein releasing system, ATP-binding protein M4S28_18570 IPR003439 ABC transporter-like M4S28_18570 IPR017871 ABC transporter, conserved site M4S28_18570 IPR003593 AAA+ ATPase domain M4S28_18570 IPR015854 ABC transporter, lipoprotein release, LolD M4S28_18580 IPR000847 Transcription regulator HTH, LysR M4S28_18580 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18580 IPR005119 LysR, substrate-binding M4S28_18580 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18595 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_18595 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site M4S28_18595 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M4S28_18595 IPR015815 3-hydroxyisobutyrate dehydrogenase-related M4S28_18595 IPR036291 NAD(P)-binding domain superfamily M4S28_18595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_18595 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain M4S28_18610 IPR017856 Integrase-like, N-terminal M4S28_18610 IPR002876 Transcriptional regulator TACO1-like M4S28_18610 IPR026564 Transcriptional regulator TACO1-like, domain 3 M4S28_18610 IPR029072 YebC-like M4S28_18620 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily M4S28_18620 IPR001533 Pterin 4 alpha carbinolamine dehydratase M4S28_18625 IPR036951 Aromatic amino acid hydroxylase superfamily M4S28_18625 IPR001273 Aromatic amino acid hydroxylase M4S28_18625 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site M4S28_18625 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily M4S28_18625 IPR019774 Aromatic amino acid hydroxylase, C-terminal M4S28_18625 IPR005960 Phenylalanine-4-hydroxylase, monomeric form M4S28_18630 IPR005914 Acetoacetyl-CoA synthase M4S28_18630 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_18630 IPR020845 AMP-binding, conserved site M4S28_18630 IPR042099 AMP-dependent synthetase-like superfamily M4S28_18630 IPR000873 AMP-dependent synthetase/ligase M4S28_18635 IPR003964 Carbamate kinase M4S28_18635 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_18635 IPR036393 Acetylglutamate kinase-like superfamily M4S28_18640 IPR004045 Glutathione S-transferase, N-terminal M4S28_18640 IPR036249 Thioredoxin-like superfamily M4S28_18640 IPR034333 Glutathione S-transferases, class Zeta , N-terminal M4S28_18640 IPR034330 Glutathione S-transferases, class Zeta , C-terminal M4S28_18640 IPR005955 Glutathione S-transferases, class Zeta M4S28_18640 IPR010987 Glutathione S-transferase, C-terminal-like M4S28_18640 IPR004046 Glutathione S-transferase, C-terminal M4S28_18640 IPR040079 Glutathione Transferase family M4S28_18640 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_18650 IPR005708 Homogentisate 1,2-dioxygenase M4S28_18650 IPR014710 RmlC-like jelly roll fold M4S28_18650 IPR011051 RmlC-like cupin domain superfamily M4S28_18655 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_18655 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_18655 IPR005956 4-hydroxyphenylpyruvate dioxygenase M4S28_18655 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal M4S28_18655 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal M4S28_18655 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18670 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_18670 IPR013611 Transport-associated OB, type 2 M4S28_18670 IPR017871 ABC transporter, conserved site M4S28_18670 IPR003439 ABC transporter-like M4S28_18670 IPR003593 AAA+ ATPase domain M4S28_18670 IPR015853 ABC transporter, ferric cation import, FbpC M4S28_18695 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_18695 IPR000524 Transcription regulator HTH, GntR M4S28_18695 IPR017722 Phosphonate utilization transcriptional regulator PhnR M4S28_18695 IPR011663 UbiC transcription regulator-associated M4S28_18695 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18695 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18700 IPR011006 CheY-like superfamily M4S28_18700 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18700 IPR003660 HAMP domain M4S28_18700 IPR005467 Histidine kinase domain M4S28_18700 IPR001789 Signal transduction response regulator, receiver domain M4S28_18700 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_18700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_18700 IPR033414 Periplasmic sensor domain M4S28_18700 IPR036641 HPT domain superfamily M4S28_18700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_18700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_18700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18710 IPR032677 GTP cyclohydrolase II M4S28_18710 IPR037238 YbiA-like superfamily M4S28_18710 IPR012816 NADAR M4S28_18710 IPR000926 GTP cyclohydrolase II, RibA M4S28_18710 IPR036144 RibA-like superfamily M4S28_18720 IPR017871 ABC transporter, conserved site M4S28_18720 IPR003439 ABC transporter-like M4S28_18720 IPR003593 AAA+ ATPase domain M4S28_18720 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_18720 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18725 IPR017871 ABC transporter, conserved site M4S28_18725 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18725 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_18725 IPR003593 AAA+ ATPase domain M4S28_18725 IPR003439 ABC transporter-like M4S28_18740 IPR025669 AAA domain M4S28_18740 IPR041250 ParA helix turn helix domain M4S28_18740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18745 IPR003115 ParB/Sulfiredoxin M4S28_18745 IPR036086 ParB/Sulfiredoxin superfamily M4S28_18745 IPR014884 ParB protein family, C-terminal M4S28_18745 IPR004437 ParB/RepB/Spo0J partition protein M4S28_18750 IPR000182 GNAT domain M4S28_18750 IPR016181 Acyl-CoA N-acyltransferase M4S28_18750 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18750 IPR007807 Helicase domain M4S28_18750 IPR032672 TmcA/NAT10/Kre33 M4S28_18750 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA M4S28_18760 IPR039421 Type I protein exporter M4S28_18760 IPR039395 Peptidase C39-like A M4S28_18760 IPR005074 Peptidase C39, bacteriocin processing M4S28_18760 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18760 IPR017871 ABC transporter, conserved site M4S28_18760 IPR003439 ABC transporter-like M4S28_18760 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_18760 IPR011527 ABC transporter type 1, transmembrane domain M4S28_18760 IPR010132 ATPase, type I secretion system, HlyB M4S28_18760 IPR003593 AAA+ ATPase domain M4S28_18775 IPR010129 Type I secretion membrane fusion protein, HlyD family M4S28_18775 IPR006144 Secretion protein HlyD, conserved site M4S28_18780 IPR025944 Sigma-54 interaction domain, conserved site M4S28_18780 IPR003593 AAA+ ATPase domain M4S28_18780 IPR011006 CheY-like superfamily M4S28_18780 IPR002197 DNA binding HTH domain, Fis-type M4S28_18780 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18780 IPR001789 Signal transduction response regulator, receiver domain M4S28_18780 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_18780 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_18780 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_18780 IPR009057 Homeobox-like domain superfamily M4S28_18785 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M4S28_18785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_18785 IPR029151 Periplasmic sensor-like domain superfamily M4S28_18785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_18785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_18785 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18785 IPR033479 Double Cache domain 1 M4S28_18785 IPR005467 Histidine kinase domain M4S28_18790 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative M4S28_18790 IPR000659 Pyridoxamine 5'-phosphate oxidase M4S28_18790 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site M4S28_18790 IPR012349 FMN-binding split barrel M4S28_18790 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal M4S28_18795 IPR001789 Signal transduction response regulator, receiver domain M4S28_18795 IPR011006 CheY-like superfamily M4S28_18795 IPR000792 Transcription regulator LuxR, C-terminal M4S28_18795 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18810 IPR009057 Homeobox-like domain superfamily M4S28_18810 IPR018060 DNA binding HTH domain, AraC-type M4S28_18810 IPR018062 HTH domain AraC-type, conserved site M4S28_18810 IPR014710 RmlC-like jelly roll fold M4S28_18810 IPR011051 RmlC-like cupin domain superfamily M4S28_18810 IPR020449 Transcription regulator HTH, AraC- type M4S28_18815 IPR010985 Ribbon-helix-helix M4S28_18815 IPR002872 Proline dehydrogenase domain M4S28_18815 IPR024082 Proline dehydrogenase PutA, domain II M4S28_18815 IPR024089 Proline dehydrogenase PutA, domain I/II M4S28_18815 IPR024090 Proline dehydrogenase PutA, domain I M4S28_18815 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain M4S28_18815 IPR029041 FAD-linked oxidoreductase-like M4S28_18815 IPR025703 Bifunctional protein PutA M4S28_18815 IPR013321 Arc-type ribbon-helix-helix M4S28_18815 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_18815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_18815 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_18815 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_18815 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_18815 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 M4S28_18815 IPR015590 Aldehyde dehydrogenase domain M4S28_18825 IPR038377 Sodium/glucose symporter superfamily M4S28_18825 IPR011851 Sodium/proline symporter M4S28_18825 IPR018212 Sodium/solute symporter, conserved site M4S28_18825 IPR001734 Sodium/solute symporter M4S28_18850 IPR036390 Winged helix DNA-binding domain superfamily M4S28_18850 IPR011991 ArsR-like helix-turn-helix domain M4S28_18850 IPR000485 AsnC-type HTH domain M4S28_18850 IPR011008 Dimeric alpha-beta barrel M4S28_18850 IPR019888 Transcription regulator AsnC-type M4S28_18850 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_18850 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_18850 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18855 IPR016991 Protein of unknown function UCP032178 M4S28_18855 IPR007383 Protein of unknown function DUF445 M4S28_18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18860 IPR003593 AAA+ ATPase domain M4S28_18860 IPR011527 ABC transporter type 1, transmembrane domain M4S28_18860 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_18860 IPR003439 ABC transporter-like M4S28_18860 IPR017871 ABC transporter, conserved site M4S28_18860 IPR039421 Type I protein exporter M4S28_18890 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB M4S28_18890 IPR023714 Zinc transport protein ZntB M4S28_18895 IPR012549 Phosphoethanolamine transferase, N-terminal M4S28_18895 IPR000917 Sulfatase, N-terminal M4S28_18895 IPR040423 Phosphoethanolamine transferase M4S28_18895 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_18915 IPR009057 Homeobox-like domain superfamily M4S28_18915 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_18915 IPR001347 Sugar isomerase (SIS) M4S28_18915 IPR003836 Glucokinase M4S28_18915 IPR035472 RpiR-like, SIS domain M4S28_18915 IPR000281 Helix-turn-helix protein RpiR M4S28_18925 IPR013108 Amidohydrolase 3 M4S28_18925 IPR023100 D-aminoacylase, insert domain superfamily M4S28_18925 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_18925 IPR032466 Metal-dependent hydrolase M4S28_18935 IPR018212 Sodium/solute symporter, conserved site M4S28_18935 IPR001734 Sodium/solute symporter M4S28_18935 IPR011849 Sodium/pantothenate symporter M4S28_18935 IPR038377 Sodium/glucose symporter superfamily M4S28_18940 IPR011611 Carbohydrate kinase PfkB M4S28_18940 IPR029056 Ribokinase-like M4S28_18940 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_18945 IPR031337 KDPG/KHG aldolase, active site 1 M4S28_18945 IPR031338 KDPG/KHG aldolase, active site 2 M4S28_18945 IPR013785 Aldolase-type TIM barrel M4S28_18945 IPR000887 KDPG/KHG aldolase M4S28_18950 IPR025705 Beta-hexosaminidase M4S28_18950 IPR015883 Glycoside hydrolase family 20, catalytic domain M4S28_18950 IPR017853 Glycoside hydrolase superfamily M4S28_18950 IPR029018 Beta-hexosaminidase-like, domain 2 M4S28_18950 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M4S28_18955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_18955 IPR033479 Double Cache domain 1 M4S28_18955 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18955 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M4S28_18955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_18955 IPR029151 Periplasmic sensor-like domain superfamily M4S28_18955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_18955 IPR005467 Histidine kinase domain M4S28_18960 IPR011006 CheY-like superfamily M4S28_18960 IPR009057 Homeobox-like domain superfamily M4S28_18960 IPR003593 AAA+ ATPase domain M4S28_18960 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_18960 IPR001789 Signal transduction response regulator, receiver domain M4S28_18960 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_18960 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_18960 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_18960 IPR025944 Sigma-54 interaction domain, conserved site M4S28_18960 IPR002197 DNA binding HTH domain, Fis-type M4S28_18975 IPR030862 L-2-hydroxyglutarate dehydrogenase M4S28_18975 IPR006076 FAD dependent oxidoreductase M4S28_18975 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_18980 IPR007484 Peptidase M28 M4S28_18980 IPR007280 Peptidase, C-terminal, archaeal/bacterial M4S28_18980 IPR012189 Peptidase M28E, aminopeptidase AP1 M4S28_18985 IPR011096 FTP domain M4S28_18985 IPR007280 Peptidase, C-terminal, archaeal/bacterial M4S28_18985 IPR023612 Peptidase M4 M4S28_18985 IPR027268 Peptidase M4/M1, CTD superfamily M4S28_18985 IPR001570 Peptidase M4, C-terminal M4S28_18985 IPR013856 Peptidase M4 domain M4S28_18985 IPR025711 PepSY domain M4S28_18995 IPR003660 HAMP domain M4S28_18995 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_18995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_18995 IPR005467 Histidine kinase domain M4S28_18995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_18995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_18995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_19000 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19000 IPR039420 Transcriptional regulatory protein WalR-like M4S28_19000 IPR011006 CheY-like superfamily M4S28_19000 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_19000 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_19000 IPR001789 Signal transduction response regulator, receiver domain M4S28_19010 IPR010081 Diaminopropionate ammonia-lyase M4S28_19010 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_19010 IPR019871 Diaminopropionate ammonia-lyase, subgroup M4S28_19010 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_19015 IPR000485 AsnC-type HTH domain M4S28_19015 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19015 IPR011991 ArsR-like helix-turn-helix domain M4S28_19015 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_19015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_19015 IPR019888 Transcription regulator AsnC-type M4S28_19015 IPR011008 Dimeric alpha-beta barrel M4S28_19015 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19025 IPR017439 Amidohydrolase M4S28_19025 IPR036264 Bacterial exopeptidase dimerisation domain M4S28_19025 IPR011650 Peptidase M20, dimerisation domain M4S28_19025 IPR002933 Peptidase M20 M4S28_19030 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_19030 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_19040 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_19040 IPR004681 TRAP transporter large membrane protein DctM M4S28_19045 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site M4S28_19045 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M4S28_19045 IPR036005 Creatinase/aminopeptidase-like M4S28_19045 IPR000587 Creatinase, N-terminal M4S28_19045 IPR000994 Peptidase M24 M4S28_19050 IPR039538 BetI-type transcriptional repressor, C-terminal M4S28_19050 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M4S28_19050 IPR009057 Homeobox-like domain superfamily M4S28_19050 IPR001647 DNA-binding HTH domain, TetR-type M4S28_19050 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_19050 IPR017757 Transcriptional repressor BetI M4S28_19055 IPR011264 Betaine aldehyde dehydrogenase M4S28_19055 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_19055 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_19055 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_19055 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_19055 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_19055 IPR015590 Aldehyde dehydrogenase domain M4S28_19060 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal M4S28_19060 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal M4S28_19060 IPR027424 Glucose Oxidase, domain 2 M4S28_19060 IPR012132 Glucose-methanol-choline oxidoreductase M4S28_19060 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_19060 IPR011533 Oxygen-dependent choline dehydrogenase M4S28_19065 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain M4S28_19070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_19070 IPR035906 MetI-like superfamily M4S28_19075 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19075 IPR005892 Glycine betaine transport ATP-binding subunit M4S28_19075 IPR000644 CBS domain M4S28_19075 IPR017871 ABC transporter, conserved site M4S28_19075 IPR003439 ABC transporter-like M4S28_19075 IPR003593 AAA+ ATPase domain M4S28_19080 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19080 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19080 IPR000835 MarR-type HTH domain M4S28_19085 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent M4S28_19085 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_19085 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_19085 IPR015590 Aldehyde dehydrogenase domain M4S28_19085 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_19085 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_19095 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M4S28_19095 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M4S28_19095 IPR039697 Iron-type alcohol dehydrogenase-like M4S28_19105 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_19105 IPR024607 Sulfatase, conserved site M4S28_19105 IPR000917 Sulfatase, N-terminal M4S28_19110 IPR013785 Aldolase-type TIM barrel M4S28_19110 IPR007197 Radical SAM M4S28_19110 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M4S28_19110 IPR023885 4Fe4S-binding SPASM domain M4S28_19115 IPR009057 Homeobox-like domain superfamily M4S28_19115 IPR001647 DNA-binding HTH domain, TetR-type M4S28_19115 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_19115 IPR011075 Tetracyclin repressor-like, C-terminal domain M4S28_19150 IPR003752 Disulphide bond formation protein DsbB/BdbC M4S28_19150 IPR022920 Disulphide bond formation protein DsbB M4S28_19150 IPR023380 DsbB-like superfamily M4S28_19155 IPR000887 KDPG/KHG aldolase M4S28_19155 IPR031337 KDPG/KHG aldolase, active site 1 M4S28_19155 IPR013785 Aldolase-type TIM barrel M4S28_19155 IPR031338 KDPG/KHG aldolase, active site 2 M4S28_19160 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_19160 IPR029056 Ribokinase-like M4S28_19160 IPR011611 Carbohydrate kinase PfkB M4S28_19165 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component M4S28_19165 IPR010973 Phosphotransferase system, sucrose-specific IIBC component M4S28_19165 IPR001996 Phosphotransferase system, IIB component, type 1 M4S28_19165 IPR013013 Phosphotransferase system, EIIC component, type 1 M4S28_19165 IPR003352 Phosphotransferase system, EIIC M4S28_19165 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site M4S28_19165 IPR036878 Glucose permease domain IIB M4S28_19170 IPR034593 Mandelate racemase-like M4S28_19170 IPR029065 Enolase C-terminal domain-like M4S28_19170 IPR029017 Enolase-like, N-terminal M4S28_19170 IPR036849 Enolase-like, C-terminal domain superfamily M4S28_19170 IPR034589 D-mannonate dehydratase-like M4S28_19170 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain M4S28_19170 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site M4S28_19170 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M4S28_19180 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19180 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19180 IPR011663 UbiC transcription regulator-associated M4S28_19180 IPR000524 Transcription regulator HTH, GntR M4S28_19180 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_19190 IPR011004 Trimeric LpxA-like superfamily M4S28_19190 IPR024688 Maltose/galactoside acetyltransferase M4S28_19190 IPR018357 Hexapeptide transferase, conserved site M4S28_19190 IPR001451 Hexapeptide repeat M4S28_19195 IPR006330 Adenosine/adenine deaminase M4S28_19195 IPR032466 Metal-dependent hydrolase M4S28_19195 IPR028893 Adenosine deaminase M4S28_19195 IPR001365 Adenosine/AMP deaminase domain M4S28_19200 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain M4S28_19200 IPR023746 Transcription regulator HTH, YidZ M4S28_19200 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19200 IPR000847 Transcription regulator HTH, LysR M4S28_19200 IPR005119 LysR, substrate-binding M4S28_19200 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19205 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain M4S28_19205 IPR007370 Glutamate--cysteine ligase M4S28_19205 IPR006334 Glutamate--cysteine ligase, monofunctional M4S28_19210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19210 IPR003593 AAA+ ATPase domain M4S28_19210 IPR011527 ABC transporter type 1, transmembrane domain M4S28_19210 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_19210 IPR039421 Type I protein exporter M4S28_19210 IPR017871 ABC transporter, conserved site M4S28_19210 IPR003439 ABC transporter-like M4S28_19215 IPR011527 ABC transporter type 1, transmembrane domain M4S28_19215 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_19215 IPR003439 ABC transporter-like M4S28_19215 IPR017871 ABC transporter, conserved site M4S28_19215 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19215 IPR039421 Type I protein exporter M4S28_19215 IPR003593 AAA+ ATPase domain M4S28_19230 IPR036291 NAD(P)-binding domain superfamily M4S28_19230 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M4S28_19230 IPR014030 Beta-ketoacyl synthase, N-terminal M4S28_19230 IPR014031 Beta-ketoacyl synthase, C-terminal M4S28_19230 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_19230 IPR011032 GroES-like superfamily M4S28_19230 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_19230 IPR032821 Ketoacyl-synthetase, C-terminal extension M4S28_19230 IPR036736 ACP-like superfamily M4S28_19230 IPR018201 Beta-ketoacyl synthase, active site M4S28_19230 IPR014043 Acyl transferase M4S28_19230 IPR016039 Thiolase-like M4S28_19230 IPR042104 Polyketide synthase, dehydratase domain superfamily M4S28_19230 IPR006162 Phosphopantetheine attachment site M4S28_19230 IPR009081 Phosphopantetheine binding ACP domain M4S28_19230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M4S28_19230 IPR013968 Polyketide synthase, ketoreductase domain M4S28_19230 IPR020843 Polyketide synthase, enoylreductase domain M4S28_19230 IPR020807 Polyketide synthase, dehydratase domain M4S28_19230 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M4S28_19255 IPR003726 Homocysteine-binding domain M4S28_19255 IPR033706 Methionine synthase, B12-binding domain M4S28_19255 IPR036724 Cobalamin-binding domain superfamily M4S28_19255 IPR006158 Cobalamin (vitamin B12)-binding domain M4S28_19255 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain M4S28_19255 IPR011822 Cobalamin-dependent methionine synthase M4S28_19255 IPR036594 Methionine synthase domain M4S28_19255 IPR000489 Pterin-binding domain M4S28_19255 IPR004223 Vitamin B12-dependent methionine synthase, activation domain M4S28_19255 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily M4S28_19255 IPR036589 Homocysteine-binding domain superfamily M4S28_19255 IPR011005 Dihydropteroate synthase-like M4S28_19270 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_19270 IPR036291 NAD(P)-binding domain superfamily M4S28_19270 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_19275 IPR036527 SCP2 sterol-binding domain superfamily M4S28_19275 IPR001279 Metallo-beta-lactamase M4S28_19275 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily M4S28_19275 IPR029229 Alkyl sulfatase, C-terminal M4S28_19275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_19275 IPR029228 Alkyl sulfatase dimerisation domain M4S28_19280 IPR000847 Transcription regulator HTH, LysR M4S28_19280 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19280 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19280 IPR005119 LysR, substrate-binding M4S28_19290 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_19290 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_19290 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_19315 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M4S28_19315 IPR017853 Glycoside hydrolase superfamily M4S28_19315 IPR018120 Glycoside hydrolase family 1, active site M4S28_19315 IPR001360 Glycoside hydrolase family 1 M4S28_19320 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_19320 IPR028082 Periplasmic binding protein-like I M4S28_19320 IPR000843 LacI-type HTH domain M4S28_19325 IPR001451 Hexapeptide repeat M4S28_19325 IPR018357 Hexapeptide transferase, conserved site M4S28_19325 IPR024688 Maltose/galactoside acetyltransferase M4S28_19325 IPR011004 Trimeric LpxA-like superfamily M4S28_19335 IPR024072 Dihydrofolate reductase-like domain superfamily M4S28_19335 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal M4S28_19345 IPR030871 Cardiolipin synthase C M4S28_19345 IPR001736 Phospholipase D/Transphosphatidylase M4S28_19345 IPR025202 Phospholipase D-like domain M4S28_19350 IPR016446 Flavin oxidoreductase Frp family M4S28_19350 IPR029479 Nitroreductase M4S28_19350 IPR000415 Nitroreductase-like M4S28_19365 IPR013785 Aldolase-type TIM barrel M4S28_19365 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M4S28_19365 IPR023885 4Fe4S-binding SPASM domain M4S28_19365 IPR007197 Radical SAM M4S28_19370 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19370 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19370 IPR005119 LysR, substrate-binding M4S28_19370 IPR000847 Transcription regulator HTH, LysR M4S28_19375 IPR000917 Sulfatase, N-terminal M4S28_19375 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_19375 IPR024607 Sulfatase, conserved site M4S28_19385 IPR013785 Aldolase-type TIM barrel M4S28_19385 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_19385 IPR023753 FAD/NAD(P)-binding domain M4S28_19385 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M4S28_19390 IPR009057 Homeobox-like domain superfamily M4S28_19390 IPR001647 DNA-binding HTH domain, TetR-type M4S28_19390 IPR023764 Transcriptional repressor HTH, FabR M4S28_19395 IPR003964 Carbamate kinase M4S28_19395 IPR001048 Aspartate/glutamate/uridylate kinase M4S28_19395 IPR036393 Acetylglutamate kinase-like superfamily M4S28_19400 IPR002293 Amino acid/polyamine transporter I M4S28_19405 IPR017754 Agmatine deiminase M4S28_19405 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type M4S28_19410 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding M4S28_19410 IPR006130 Aspartate/ornithine carbamoyltransferase M4S28_19410 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily M4S28_19410 IPR002292 Ornithine/putrescine carbamoyltransferase M4S28_19410 IPR024903 Putrescine carbamoyltransferase PtcA M4S28_19410 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain M4S28_19415 IPR006056 RidA family M4S28_19415 IPR019897 RidA, conserved site M4S28_19415 IPR035959 RutC-like superfamily M4S28_19415 IPR006175 YjgF/YER057c/UK114 family M4S28_19425 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19425 IPR005119 LysR, substrate-binding M4S28_19425 IPR000847 Transcription regulator HTH, LysR M4S28_19425 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19440 IPR005119 LysR, substrate-binding M4S28_19440 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19440 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19440 IPR000847 Transcription regulator HTH, LysR M4S28_19445 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_19445 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_19445 IPR036291 NAD(P)-binding domain superfamily M4S28_19450 IPR031656 Alpha-glycerophosphate oxidase, C-terminal M4S28_19450 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily M4S28_19450 IPR006076 FAD dependent oxidoreductase M4S28_19450 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_19450 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase M4S28_19455 IPR037171 NagB/RpiA transferase-like M4S28_19455 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19455 IPR001034 DeoR-type HTH domain M4S28_19455 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19455 IPR014036 DeoR C-terminal sensor domain M4S28_19455 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M4S28_19460 IPR018485 Carbohydrate kinase, FGGY, C-terminal M4S28_19460 IPR000577 Carbohydrate kinase, FGGY M4S28_19460 IPR005999 Glycerol kinase M4S28_19460 IPR018484 Carbohydrate kinase, FGGY, N-terminal M4S28_19460 IPR018483 Carbohydrate kinase, FGGY, conserved site M4S28_19465 IPR023271 Aquaporin-like M4S28_19465 IPR000425 Major intrinsic protein M4S28_19465 IPR022357 Major intrinsic protein, conserved site M4S28_19470 IPR011527 ABC transporter type 1, transmembrane domain M4S28_19470 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19470 IPR005074 Peptidase C39, bacteriocin processing M4S28_19470 IPR017871 ABC transporter, conserved site M4S28_19470 IPR003439 ABC transporter-like M4S28_19470 IPR003593 AAA+ ATPase domain M4S28_19470 IPR010132 ATPase, type I secretion system, HlyB M4S28_19470 IPR039395 Peptidase C39-like A M4S28_19470 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_19470 IPR039421 Type I protein exporter M4S28_19475 IPR010129 Type I secretion membrane fusion protein, HlyD family M4S28_19475 IPR006144 Secretion protein HlyD, conserved site M4S28_19480 IPR010132 ATPase, type I secretion system, HlyB M4S28_19480 IPR003593 AAA+ ATPase domain M4S28_19480 IPR011527 ABC transporter type 1, transmembrane domain M4S28_19480 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_19480 IPR003439 ABC transporter-like M4S28_19480 IPR017871 ABC transporter, conserved site M4S28_19480 IPR039421 Type I protein exporter M4S28_19480 IPR039395 Peptidase C39-like A M4S28_19480 IPR005074 Peptidase C39, bacteriocin processing M4S28_19480 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19490 IPR003996 RTX toxin-activating protein C, bacteria M4S28_19495 IPR029058 Alpha/Beta hydrolase fold M4S28_19495 IPR032074 Actin cross-linking domain M4S28_19495 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily M4S28_19495 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain M4S28_19495 IPR022742 Serine aminopeptidase, S33 M4S28_19495 IPR011509 RtxA toxin M4S28_19495 IPR011049 Serralysin-like metalloprotease, C-terminal M4S28_19495 IPR020974 CGT/MARTX, cysteine protease (CPD) domain M4S28_19505 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19505 IPR005119 LysR, substrate-binding M4S28_19505 IPR000847 Transcription regulator HTH, LysR M4S28_19505 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19510 IPR004706 Arsenical-resistance protein Acr3 M4S28_19510 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 M4S28_19510 IPR038770 Sodium/solute symporter superfamily M4S28_19515 IPR011991 ArsR-like helix-turn-helix domain M4S28_19515 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19515 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19515 IPR001845 HTH ArsR-type DNA-binding domain M4S28_19525 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_19525 IPR009057 Homeobox-like domain superfamily M4S28_19525 IPR001647 DNA-binding HTH domain, TetR-type M4S28_19525 IPR023769 Nucleoid occlusion factor SlmA M4S28_19530 IPR036412 HAD-like superfamily M4S28_19530 IPR006379 HAD-superfamily hydrolase, subfamily IIB M4S28_19530 IPR023214 HAD superfamily M4S28_19530 IPR000150 Cof family M4S28_19540 IPR009351 Protein of unknown function DUF1006 M4S28_19545 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19545 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19545 IPR000847 Transcription regulator HTH, LysR M4S28_19545 IPR005119 LysR, substrate-binding M4S28_19555 IPR004104 Oxidoreductase, C-terminal M4S28_19555 IPR036291 NAD(P)-binding domain superfamily M4S28_19555 IPR000683 Oxidoreductase, N-terminal M4S28_19580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M4S28_19580 IPR023951 L-ascorbate-6-phosphate lactonase UlaG M4S28_19585 IPR001034 DeoR-type HTH domain M4S28_19585 IPR018356 Transcription regulator, HTH DeoR-type, conserved site M4S28_19585 IPR037171 NagB/RpiA transferase-like M4S28_19585 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19585 IPR014036 DeoR C-terminal sensor domain M4S28_19585 IPR023711 Transcription regulator HTH, UlaR M4S28_19585 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19590 IPR004703 Phosphotransferase system, sugar-specific permease component M4S28_19595 IPR016152 Phosphotransferase/anion transporter M4S28_19595 IPR002178 PTS EIIA type-2 domain M4S28_19600 IPR001303 Class II aldolase/adducin N-terminal M4S28_19600 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M4S28_19600 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF M4S28_19605 IPR023214 HAD superfamily M4S28_19605 IPR000150 Cof family M4S28_19605 IPR006379 HAD-superfamily hydrolase, subfamily IIB M4S28_19605 IPR036412 HAD-like superfamily M4S28_19610 IPR011060 Ribulose-phosphate binding barrel M4S28_19610 IPR013785 Aldolase-type TIM barrel M4S28_19610 IPR041710 HPS/KGPDC domain M4S28_19610 IPR001754 Orotidine 5'-phosphate decarboxylase domain M4S28_19615 IPR013022 Xylose isomerase-like, TIM barrel domain M4S28_19615 IPR001719 AP endonuclease 2 M4S28_19615 IPR004560 L-ribulose-5-phosphate 3-epimerase M4S28_19615 IPR036237 Xylose isomerase-like superfamily M4S28_19625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_19625 IPR023214 HAD superfamily M4S28_19625 IPR006439 HAD hydrolase, subfamily IA M4S28_19625 IPR036412 HAD-like superfamily M4S28_19625 IPR010976 Beta-phosphoglucomutase hydrolase M4S28_19625 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_19630 IPR011060 Ribulose-phosphate binding barrel M4S28_19630 IPR000056 Ribulose-phosphate 3-epimerase-like M4S28_19630 IPR026019 Ribulose-phosphate 3-epimerase M4S28_19630 IPR013785 Aldolase-type TIM barrel M4S28_19640 IPR005964 Bacterial glucose/galactose transporter M4S28_19640 IPR011701 Major facilitator superfamily M4S28_19640 IPR036259 MFS transporter superfamily M4S28_19650 IPR001719 AP endonuclease 2 M4S28_19650 IPR013022 Xylose isomerase-like, TIM barrel domain M4S28_19650 IPR036237 Xylose isomerase-like superfamily M4S28_19650 IPR004560 L-ribulose-5-phosphate 3-epimerase M4S28_19655 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19655 IPR014757 Transcription regulator IclR, C-terminal M4S28_19655 IPR029016 GAF-like domain superfamily M4S28_19655 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19655 IPR005471 Transcription regulator IclR, N-terminal M4S28_19660 IPR011060 Ribulose-phosphate binding barrel M4S28_19660 IPR041710 HPS/KGPDC domain M4S28_19660 IPR001754 Orotidine 5'-phosphate decarboxylase domain M4S28_19660 IPR013785 Aldolase-type TIM barrel M4S28_19665 IPR000577 Carbohydrate kinase, FGGY M4S28_19665 IPR018485 Carbohydrate kinase, FGGY, C-terminal M4S28_19665 IPR018483 Carbohydrate kinase, FGGY, conserved site M4S28_19665 IPR018484 Carbohydrate kinase, FGGY, N-terminal M4S28_19675 IPR000150 Cof family M4S28_19675 IPR036412 HAD-like superfamily M4S28_19675 IPR006379 HAD-superfamily hydrolase, subfamily IIB M4S28_19675 IPR023214 HAD superfamily M4S28_19680 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M4S28_19680 IPR001303 Class II aldolase/adducin N-terminal M4S28_19680 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF M4S28_19685 IPR004682 TRAP transporter solute receptor, DctP family M4S28_19685 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_19685 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_19690 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_19690 IPR004681 TRAP transporter large membrane protein DctM M4S28_19695 IPR007387 TRAP transporter, small membrane protein DctQ M4S28_19700 IPR003767 Malate/L-lactate dehydrogenase-like M4S28_19700 IPR023689 2,3-diketo-L-gulonate reductase M4S28_19700 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily M4S28_19705 IPR018193 Glycerate kinase, flavodoxin-like fold M4S28_19705 IPR004381 Glycerate kinase M4S28_19705 IPR018197 Glycerate kinase, restriction-enzyme-like fold M4S28_19705 IPR036129 Glycerate kinase superfamily M4S28_19710 IPR010582 Catalase immune-responsive domain M4S28_19710 IPR037060 Catalase core domain superfamily M4S28_19710 IPR020835 Catalase superfamily M4S28_19710 IPR002226 Catalase haem-binding site M4S28_19710 IPR011614 Catalase core domain M4S28_19710 IPR018028 Catalase, mono-functional, haem-containing M4S28_19710 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 M4S28_19710 IPR040333 Catalase, clade 3 M4S28_19710 IPR024708 Catalase active site M4S28_19715 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M4S28_19715 IPR037483 YjjU-like M4S28_19715 IPR002641 Patatin-like phospholipase domain M4S28_19720 IPR036291 NAD(P)-binding domain superfamily M4S28_19720 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M4S28_19720 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M4S28_19720 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M4S28_19720 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain M4S28_19730 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_19730 IPR017938 Riboflavin synthase-like beta-barrel M4S28_19730 IPR033892 Ferredoxin--NADP reductase, bacteria M4S28_19730 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_19730 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_19730 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M4S28_19735 IPR002123 Phospholipid/glycerol acyltransferase M4S28_19740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_19740 IPR006901 tRNA methyltransferase TrmK M4S28_19750 IPR004193 Glycoside hydrolase, family 13, N-terminal M4S28_19750 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_19750 IPR013780 Glycosyl hydrolase, all-beta M4S28_19750 IPR011837 Glycogen debranching enzyme, GlgX type M4S28_19750 IPR017853 Glycoside hydrolase superfamily M4S28_19750 IPR013783 Immunoglobulin-like fold M4S28_19750 IPR014756 Immunoglobulin E-set M4S28_19755 IPR036998 Porin, LamB-type superfamily M4S28_19755 IPR023738 Maltoporin M4S28_19755 IPR003192 Porin, LamB-type M4S28_19765 IPR013784 Carbohydrate-binding-like fold M4S28_19765 IPR041111 Pullulanase, Ins domain M4S28_19765 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_19765 IPR004193 Glycoside hydrolase, family 13, N-terminal M4S28_19765 IPR040671 Pullulanase, N2 domain M4S28_19765 IPR013780 Glycosyl hydrolase, all-beta M4S28_19765 IPR005323 Pullulanase, carbohydrate-binding module 41 M4S28_19765 IPR013783 Immunoglobulin-like fold M4S28_19765 IPR014756 Immunoglobulin E-set M4S28_19765 IPR011839 Alpha-1,6-glucosidases, pullulanase-type M4S28_19765 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal M4S28_19765 IPR017853 Glycoside hydrolase superfamily M4S28_19770 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_19770 IPR013780 Glycosyl hydrolase, all-beta M4S28_19770 IPR017853 Glycoside hydrolase superfamily M4S28_19770 IPR013783 Immunoglobulin-like fold M4S28_19770 IPR014756 Immunoglobulin E-set M4S28_19770 IPR032091 Maltogenic Amylase, C-terminal M4S28_19770 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain M4S28_19780 IPR001123 Amino acid exporter protein, LeuE-type M4S28_19785 IPR000485 AsnC-type HTH domain M4S28_19785 IPR011008 Dimeric alpha-beta barrel M4S28_19785 IPR019888 Transcription regulator AsnC-type M4S28_19785 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_19785 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_19785 IPR011991 ArsR-like helix-turn-helix domain M4S28_19785 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19785 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19790 IPR000847 Transcription regulator HTH, LysR M4S28_19790 IPR005119 LysR, substrate-binding M4S28_19790 IPR036390 Winged helix DNA-binding domain superfamily M4S28_19790 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19795 IPR036909 Cytochrome c-like domain superfamily M4S28_19795 IPR009056 Cytochrome c-like domain M4S28_19805 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_19805 IPR006656 Molybdopterin oxidoreductase M4S28_19805 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_19805 IPR037946 Tetrathionate reductase subunit A, MopB domain M4S28_19805 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_19805 IPR041929 Tetrathionate reductase subunit A, N-terminal M4S28_19810 IPR005614 NrfD family M4S28_19815 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_19815 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_19815 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_19820 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_19820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_19820 IPR005467 Histidine kinase domain M4S28_19820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_19820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_19820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_19825 IPR011006 CheY-like superfamily M4S28_19825 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19825 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_19825 IPR001789 Signal transduction response regulator, receiver domain M4S28_19825 IPR000792 Transcription regulator LuxR, C-terminal M4S28_19835 IPR023025 Serine/threonine transporter SstT M4S28_19835 IPR001991 Sodium:dicarboxylate symporter M4S28_19835 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_19840 IPR004881 Ribosome biogenesis GTPase RsgA M4S28_19840 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19840 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M4S28_19840 IPR010914 RsgA GTPase domain M4S28_19850 IPR003782 Copper chaperone SCO1/SenC M4S28_19850 IPR036249 Thioredoxin-like superfamily M4S28_19865 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19865 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_19865 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_19865 IPR000792 Transcription regulator LuxR, C-terminal M4S28_19865 IPR023768 Transcriptional regulator HTH-type, MalT M4S28_19865 IPR041617 MalT-like TPR region M4S28_19865 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_19870 IPR035090 Phosphorylase pyridoxal-phosphate attachment site M4S28_19870 IPR011833 Glycogen/starch/alpha-glucan phosphorylase M4S28_19870 IPR000811 Glycosyl transferase, family 35 M4S28_19875 IPR017853 Glycoside hydrolase superfamily M4S28_19875 IPR003385 Glycoside hydrolase, family 77 M4S28_19880 IPR014756 Immunoglobulin E-set M4S28_19880 IPR013783 Immunoglobulin-like fold M4S28_19880 IPR013780 Glycosyl hydrolase, all-beta M4S28_19880 IPR004193 Glycoside hydrolase, family 13, N-terminal M4S28_19880 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_19880 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB M4S28_19880 IPR037439 1,4-alpha-glucan-branching enzyme M4S28_19880 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta M4S28_19880 IPR017853 Glycoside hydrolase superfamily M4S28_19890 IPR002559 Transposase, IS4-like M4S28_19890 IPR012337 Ribonuclease H-like superfamily M4S28_19890 IPR024473 Transposase, IS4, N-terminal M4S28_19900 IPR003439 ABC transporter-like M4S28_19900 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19900 IPR017871 ABC transporter, conserved site M4S28_19900 IPR022216 Putative ABC cobalt transporter M4S28_19900 IPR003593 AAA+ ATPase domain M4S28_19905 IPR022914 Protein of unknown function UPF0397 M4S28_19905 IPR009825 ECF transporter, substrate-specific component-like M4S28_19910 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_19915 IPR011223 Uncharacterised conserved protein UCP028770 M4S28_19925 IPR029787 Nucleotide cyclase M4S28_19925 IPR000160 GGDEF domain M4S28_19940 IPR000845 Nucleoside phosphorylase domain M4S28_19940 IPR035994 Nucleoside phosphorylase superfamily M4S28_19940 IPR004402 Purine nucleoside phosphorylase DeoD-type M4S28_19945 IPR038063 L,D-transpeptidase catalytic domain-like M4S28_19945 IPR018392 LysM domain M4S28_19945 IPR041597 L,D-transpeptidase C-terminal domain M4S28_19945 IPR005490 L,D-transpeptidase catalytic domain M4S28_19955 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_19955 IPR001650 Helicase, C-terminal M4S28_19955 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19955 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_19955 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_19955 IPR011545 DEAD/DEAH box helicase domain M4S28_19955 IPR028621 ATP-dependent RNA helicase SrmB M4S28_19960 IPR001087 GDSL lipase/esterase M4S28_19960 IPR036514 SGNH hydrolase superfamily M4S28_19960 IPR008265 Lipase, GDSL, active site M4S28_19965 IPR000073 Alpha/beta hydrolase fold-1 M4S28_19965 IPR029058 Alpha/Beta hydrolase fold M4S28_19970 IPR004961 Lipase chaperone M4S28_19975 IPR003660 HAMP domain M4S28_19975 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_19975 IPR033480 Single Cache domain 2 M4S28_19975 IPR004090 Chemotaxis methyl-accepting receptor M4S28_19980 IPR024370 PBP domain M4S28_19985 IPR011864 Phosphate ABC transporter, permease protein PstC M4S28_19985 IPR035906 MetI-like superfamily M4S28_19985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_19990 IPR005672 Phosphate transport system permease protein PstA M4S28_19990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_19990 IPR035906 MetI-like superfamily M4S28_19995 IPR003593 AAA+ ATPase domain M4S28_19995 IPR003439 ABC transporter-like M4S28_19995 IPR017871 ABC transporter, conserved site M4S28_19995 IPR015850 ABC transporter, phosphate import, PstB M4S28_19995 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_19995 IPR005670 Phosphate transport system permease protein 1 M4S28_20020 IPR022933 Uncharacterised protein family UPF0353 M4S28_20020 IPR036465 von Willebrand factor A-like domain superfamily M4S28_20020 IPR002035 von Willebrand factor, type A M4S28_20020 IPR024163 Aerotolerance regulator, N-terminal M4S28_20025 IPR036465 von Willebrand factor A-like domain superfamily M4S28_20025 IPR002035 von Willebrand factor, type A M4S28_20025 IPR022933 Uncharacterised protein family UPF0353 M4S28_20025 IPR024163 Aerotolerance regulator, N-terminal M4S28_20035 IPR036465 von Willebrand factor A-like domain superfamily M4S28_20035 IPR002881 Domain of unknown function DUF58 M4S28_20040 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20040 IPR041628 ChlI/MoxR, AAA lid domain M4S28_20040 IPR011703 ATPase, AAA-3 M4S28_20045 IPR033479 Double Cache domain 1 M4S28_20045 IPR003660 HAMP domain M4S28_20045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_20055 IPR015855 ABC transporter, maltose/maltodextrin import, MalK M4S28_20055 IPR003593 AAA+ ATPase domain M4S28_20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20055 IPR013611 Transport-associated OB, type 2 M4S28_20055 IPR003439 ABC transporter-like M4S28_20055 IPR017871 ABC transporter, conserved site M4S28_20055 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_20060 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein M4S28_20060 IPR006061 Solute-binding family 1, conserved site M4S28_20060 IPR006059 Bacterial extracellular solute-binding protein M4S28_20065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_20065 IPR029345 Maltose transport system permease protein MalF, P2 domain M4S28_20065 IPR035277 MalF, N-terminal M4S28_20065 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like M4S28_20065 IPR035906 MetI-like superfamily M4S28_20070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_20070 IPR035906 MetI-like superfamily M4S28_20080 IPR039424 Solute-binding protein family 5 M4S28_20080 IPR000914 Solute-binding protein family 5 domain M4S28_20080 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M4S28_20080 IPR023767 Transcriptional regulator SgrR M4S28_20095 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_20095 IPR039424 Solute-binding protein family 5 M4S28_20095 IPR023765 Solute-binding protein family 5, conserved site M4S28_20095 IPR000914 Solute-binding protein family 5 domain M4S28_20110 IPR005119 LysR, substrate-binding M4S28_20110 IPR000847 Transcription regulator HTH, LysR M4S28_20110 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20110 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20125 IPR007346 Endonuclease I M4S28_20135 IPR025857 MacB-like periplasmic core domain M4S28_20135 IPR003838 ABC transporter permease protein domain M4S28_20140 IPR003593 AAA+ ATPase domain M4S28_20140 IPR003439 ABC transporter-like M4S28_20140 IPR017871 ABC transporter, conserved site M4S28_20140 IPR015854 ABC transporter, lipoprotein release, LolD M4S28_20140 IPR011924 Lipoprotein releasing system, ATP-binding protein M4S28_20140 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20165 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase M4S28_20165 IPR008334 5'-Nucleotidase, C-terminal M4S28_20165 IPR041827 CpdB, N-terminal metallophosphatase domain M4S28_20165 IPR006146 5'-Nucleotidase, conserved site M4S28_20165 IPR006179 5'-Nucleotidase/apyrase M4S28_20165 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M4S28_20165 IPR029052 Metallo-dependent phosphatase-like M4S28_20165 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_20170 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20170 IPR015863 ABC transporter, hemin import, HmuV M4S28_20170 IPR003593 AAA+ ATPase domain M4S28_20170 IPR003439 ABC transporter-like M4S28_20170 IPR017871 ABC transporter, conserved site M4S28_20180 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_20180 IPR037294 ABC transporter, BtuC-like M4S28_20195 IPR006158 Cobalamin (vitamin B12)-binding domain M4S28_20195 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_20195 IPR007197 Radical SAM M4S28_20195 IPR020612 Methylthiotransferase, conserved site M4S28_20195 IPR006638 Elp3/MiaB/NifB M4S28_20195 IPR034498 Bacteriochlorophyll C8 methyltransferase M4S28_20210 IPR029787 Nucleotide cyclase M4S28_20210 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M4S28_20210 IPR000160 GGDEF domain M4S28_20230 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_20230 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_20230 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase M4S28_20230 IPR036291 NAD(P)-binding domain superfamily M4S28_20250 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20250 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20250 IPR000847 Transcription regulator HTH, LysR M4S28_20250 IPR005119 LysR, substrate-binding M4S28_20255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_20255 IPR005467 Histidine kinase domain M4S28_20255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_20255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_20255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_20255 IPR001789 Signal transduction response regulator, receiver domain M4S28_20255 IPR011006 CheY-like superfamily M4S28_20255 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_20260 IPR035304 Acyl homoserine lactone synthase M4S28_20265 IPR007280 Peptidase, C-terminal, archaeal/bacterial M4S28_20265 IPR013661 Peptidase M9, collagenase, N-terminal domain M4S28_20265 IPR002169 Peptidase M9A/M9B, collagenase, bacterial M4S28_20280 IPR039556 ICL/PEPM domain M4S28_20280 IPR006254 Isocitrate lyase M4S28_20280 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily M4S28_20280 IPR040442 Pyruvate kinase-like domain superfamily M4S28_20285 IPR005119 LysR, substrate-binding M4S28_20285 IPR000847 Transcription regulator HTH, LysR M4S28_20285 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20285 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20290 IPR011076 Malate synthase-like superfamily M4S28_20290 IPR001465 Malate synthase M4S28_20290 IPR023310 Malate synthase G, beta sub-domain M4S28_20290 IPR006253 Malate synthase G M4S28_20295 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_20295 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_20295 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_20295 IPR015590 Aldehyde dehydrogenase domain M4S28_20295 IPR010102 Succinate semialdehyde dehydrogenase M4S28_20295 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_20295 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_20300 IPR029016 GAF-like domain superfamily M4S28_20300 IPR014757 Transcription regulator IclR, C-terminal M4S28_20300 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20300 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20300 IPR005471 Transcription regulator IclR, N-terminal M4S28_20305 IPR012147 Phosphate acetyl/butyryltransferase M4S28_20305 IPR004614 Phosphate acetyltransferase M4S28_20305 IPR042113 Phosphate acetyltransferase, domain 1 M4S28_20305 IPR042112 Phosphate acetyltransferase, domain 2 M4S28_20305 IPR002505 Phosphate acetyl/butaryl transferase M4S28_20310 IPR002781 Transmembrane protein TauE-like M4S28_20315 IPR006538 Cobalt chelatase, CobT subunit M4S28_20315 IPR025861 Cobalamin biosynthesis protein CobT VWA domain M4S28_20315 IPR002035 von Willebrand factor, type A M4S28_20315 IPR036465 von Willebrand factor A-like domain superfamily M4S28_20320 IPR025865 Cobaltochelatase subunit CobS N-terminal domain M4S28_20320 IPR011704 ATPase, dynein-related, AAA domain M4S28_20320 IPR006537 Cobaltochelatase subunit CobS M4S28_20320 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20320 IPR013615 CbbQ/NirQ/NorQ, C-terminal M4S28_20325 IPR029061 Thiamin diphosphate-binding fold M4S28_20325 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding M4S28_20325 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain M4S28_20325 IPR012000 Thiamine pyrophosphate enzyme, central domain M4S28_20325 IPR017820 Sulphoacetaldehyde acetyltransferase M4S28_20325 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_20340 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_20340 IPR006076 FAD dependent oxidoreductase M4S28_20345 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_20345 IPR004682 TRAP transporter solute receptor, DctP family M4S28_20345 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_20350 IPR007387 TRAP transporter, small membrane protein DctQ M4S28_20355 IPR007387 TRAP transporter, small membrane protein DctQ M4S28_20355 IPR004681 TRAP transporter large membrane protein DctM M4S28_20355 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_20370 IPR000060 BCCT transporter family M4S28_20370 IPR018093 BCCT transporter, conserved site M4S28_20380 IPR000160 GGDEF domain M4S28_20380 IPR029787 Nucleotide cyclase M4S28_20380 IPR033416 Periplasmic sensor domain CHASE7 M4S28_20385 IPR032466 Metal-dependent hydrolase M4S28_20385 IPR004721 Dihydroorotase homodimeric type M4S28_20385 IPR002195 Dihydroorotase, conserved site M4S28_20385 IPR006680 Amidohydrolase-related M4S28_20395 IPR011037 Pyruvate kinase-like, insert domain superfamily M4S28_20395 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_20395 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_20395 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site M4S28_20395 IPR012675 Beta-grasp domain superfamily M4S28_20395 IPR005302 Molybdenum cofactor sulfurase, C-terminal M4S28_20395 IPR005303 MOSC, N-terminal beta barrel M4S28_20400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_20400 IPR022926 NH(3)-dependent NAD(+) synthetase M4S28_20400 IPR022310 NAD/GMP synthase M4S28_20400 IPR003694 NAD(+) synthetase M4S28_20405 IPR004821 Cytidyltransferase-like domain M4S28_20405 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase M4S28_20405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_20445 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20445 IPR015863 ABC transporter, hemin import, HmuV M4S28_20445 IPR003593 AAA+ ATPase domain M4S28_20445 IPR003439 ABC transporter-like M4S28_20450 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_20450 IPR037294 ABC transporter, BtuC-like M4S28_20460 IPR003400 Biopolymer transport protein ExbD/TolR M4S28_20465 IPR002898 MotA/TolQ/ExbB proton channel M4S28_20470 IPR003538 Gram-negative bacterial TonB protein M4S28_20470 IPR006260 TonB/TolA, C-terminal M4S28_20470 IPR037682 TonB, C-terminal M4S28_20475 IPR034505 Anaerobic coproporphyrinogen-III oxidase M4S28_20475 IPR006638 Elp3/MiaB/NifB M4S28_20475 IPR026332 Anaerobilin synthase HutW M4S28_20475 IPR007197 Radical SAM M4S28_20475 IPR023404 Radical SAM, alpha/beta horseshoe M4S28_20480 IPR010413 Intracellular heme transport protein HutX-like M4S28_20485 IPR012349 FMN-binding split barrel M4S28_20485 IPR014419 Heme utilization protein HutZ M4S28_20485 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative M4S28_20490 IPR016030 Cobalamin adenosyltransferase-like M4S28_20490 IPR036451 Cobalamin adenosyltransferase-like superfamily M4S28_20490 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type M4S28_20495 IPR011006 CheY-like superfamily M4S28_20495 IPR024181 Chemotaxis response regulator CheV M4S28_20495 IPR036061 CheW-like domain superfamily M4S28_20495 IPR001789 Signal transduction response regulator, receiver domain M4S28_20495 IPR002545 CheW-like domain M4S28_20500 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site M4S28_20500 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type M4S28_20505 IPR017853 Glycoside hydrolase superfamily M4S28_20505 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_20505 IPR006046 Alpha amylase M4S28_20510 IPR033479 Double Cache domain 1 M4S28_20510 IPR004090 Chemotaxis methyl-accepting receptor M4S28_20510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_20510 IPR029151 Periplasmic sensor-like domain superfamily M4S28_20510 IPR000727 Target SNARE coiled-coil homology domain M4S28_20510 IPR003660 HAMP domain M4S28_20515 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_20540 IPR011055 Duplicated hybrid motif M4S28_20540 IPR016047 Peptidase M23 M4S28_20540 IPR013731 Opacity-associated protein A, N-terminal M4S28_20540 IPR018392 LysM domain M4S28_20545 IPR013655 PAS fold-3 M4S28_20545 IPR001633 EAL domain M4S28_20545 IPR035919 EAL domain superfamily M4S28_20545 IPR000160 GGDEF domain M4S28_20545 IPR029787 Nucleotide cyclase M4S28_20545 IPR001610 PAC motif M4S28_20545 IPR013656 PAS fold-4 M4S28_20545 IPR035965 PAS domain superfamily M4S28_20545 IPR000700 PAS-associated, C-terminal M4S28_20545 IPR000014 PAS domain M4S28_20550 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20550 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20550 IPR005119 LysR, substrate-binding M4S28_20550 IPR000847 Transcription regulator HTH, LysR M4S28_20555 IPR011701 Major facilitator superfamily M4S28_20555 IPR004734 Multidrug resistance protein M4S28_20555 IPR036259 MFS transporter superfamily M4S28_20555 IPR020846 Major facilitator superfamily domain M4S28_20565 IPR036249 Thioredoxin-like superfamily M4S28_20565 IPR011900 Glutaredoxin, GrxC M4S28_20565 IPR014025 Glutaredoxin subgroup M4S28_20565 IPR002109 Glutaredoxin M4S28_20565 IPR011767 Glutaredoxin active site M4S28_20570 IPR000620 EamA domain M4S28_20585 IPR004670 Na+/H+ antiporter NhaA M4S28_20585 IPR013766 Thioredoxin domain M4S28_20585 IPR036249 Thioredoxin-like superfamily M4S28_20585 IPR012336 Thioredoxin-like fold M4S28_20585 IPR023171 Na/H antiporter domain superfamily M4S28_20590 IPR036249 Thioredoxin-like superfamily M4S28_20590 IPR005746 Thioredoxin M4S28_20590 IPR013766 Thioredoxin domain M4S28_20590 IPR017937 Thioredoxin, conserved site M4S28_20595 IPR013766 Thioredoxin domain M4S28_20595 IPR017937 Thioredoxin, conserved site M4S28_20595 IPR036249 Thioredoxin-like superfamily M4S28_20595 IPR022910 Thiol:disulphide interchange protein DsbD M4S28_20595 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M4S28_20595 IPR003834 Cytochrome C biogenesis protein, transmembrane domain M4S28_20595 IPR035671 DsbD gamma M4S28_20595 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M4S28_20610 IPR011066 Mechanosensitive ion channel MscS, C-terminal M4S28_20610 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M4S28_20610 IPR023408 Mechanosensitive ion channel MscS domain superfamily M4S28_20610 IPR008910 Conserved TM helix M4S28_20610 IPR010920 LSM domain superfamily M4S28_20610 IPR006685 Mechanosensitive ion channel MscS M4S28_20610 IPR006686 Mechanosensitive ion channel MscS, conserved site M4S28_20650 IPR005074 Peptidase C39, bacteriocin processing M4S28_20650 IPR039395 Peptidase C39-like A M4S28_20650 IPR003593 AAA+ ATPase domain M4S28_20650 IPR011527 ABC transporter type 1, transmembrane domain M4S28_20650 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_20650 IPR039421 Type I protein exporter M4S28_20650 IPR003439 ABC transporter-like M4S28_20650 IPR017871 ABC transporter, conserved site M4S28_20650 IPR010132 ATPase, type I secretion system, HlyB M4S28_20650 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20655 IPR006144 Secretion protein HlyD, conserved site M4S28_20655 IPR010129 Type I secretion membrane fusion protein, HlyD family M4S28_20660 IPR010130 Type I secretion outer membrane protein, TolC M4S28_20660 IPR003423 Outer membrane efflux protein M4S28_20680 IPR036812 NADP-dependent oxidoreductase domain superfamily M4S28_20680 IPR020471 Aldo/keto reductase M4S28_20680 IPR023210 NADP-dependent oxidoreductase domain M4S28_20685 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_20685 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20685 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M4S28_20685 IPR001650 Helicase, C-terminal M4S28_20685 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_20685 IPR028619 ATP-dependent RNA helicase DbpA M4S28_20685 IPR011545 DEAD/DEAH box helicase domain M4S28_20685 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M4S28_20685 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_20700 IPR029460 DNA polymerase, helix-hairpin-helix motif M4S28_20700 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain M4S28_20700 IPR013520 Exonuclease, RNase T/DNA polymerase III M4S28_20700 IPR012340 Nucleic acid-binding, OB-fold M4S28_20700 IPR036397 Ribonuclease H superfamily M4S28_20700 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_20700 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type M4S28_20700 IPR012337 Ribonuclease H-like superfamily M4S28_20700 IPR040982 DNA polymerase III alpha subunit finger domain M4S28_20700 IPR004013 PHP domain M4S28_20700 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain M4S28_20700 IPR024754 DNA polymerase III polC-like, N-terminal domain II M4S28_20710 IPR011545 DEAD/DEAH box helicase domain M4S28_20710 IPR028622 ATP-dependent RNA helicase RhlE M4S28_20710 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_20710 IPR001650 Helicase, C-terminal M4S28_20710 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_20710 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_20710 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20715 IPR012825 5,6-dimethylbenzimidazole synthase BluB M4S28_20715 IPR000415 Nitroreductase-like M4S28_20715 IPR029479 Nitroreductase M4S28_20730 IPR028348 FAD dependent protein M4S28_20730 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_20735 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_20735 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_20735 IPR000813 7Fe ferredoxin M4S28_20735 IPR022569 Ferredoxin, C-terminal M4S28_20740 IPR013123 RNA 2-O ribose methyltransferase, substrate binding M4S28_20740 IPR001537 tRNA/rRNA methyltransferase, SpoU type M4S28_20740 IPR029064 50S ribosomal protein L30e-like M4S28_20740 IPR029028 Alpha/beta knot methyltransferases M4S28_20740 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M4S28_20745 IPR020471 Aldo/keto reductase M4S28_20745 IPR023210 NADP-dependent oxidoreductase domain M4S28_20745 IPR036812 NADP-dependent oxidoreductase domain superfamily M4S28_20755 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site M4S28_20755 IPR036264 Bacterial exopeptidase dimerisation domain M4S28_20755 IPR002933 Peptidase M20 M4S28_20755 IPR011650 Peptidase M20, dimerisation domain M4S28_20755 IPR010161 Peptidase M20B, tripeptide aminopeptidase M4S28_20770 IPR016192 APOBEC/CMP deaminase, zinc-binding M4S28_20770 IPR002125 Cytidine and deoxycytidylate deaminase domain M4S28_20770 IPR016193 Cytidine deaminase-like M4S28_20770 IPR035105 Deoxycytidylate deaminase domain M4S28_20770 IPR016473 Deoxycytidylate deaminase M4S28_20770 IPR015517 Deoxycytidylate deaminase-related M4S28_20775 IPR006143 RND efflux pump, membrane fusion protein M4S28_20775 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_20780 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 M4S28_20780 IPR001036 Acriflavin resistance protein M4S28_20780 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_20785 IPR039375 Nodulation protein N-like M4S28_20785 IPR002539 MaoC-like dehydratase domain M4S28_20785 IPR029069 HotDog domain superfamily M4S28_20790 IPR024370 PBP domain M4S28_20800 IPR018060 DNA binding HTH domain, AraC-type M4S28_20800 IPR020449 Transcription regulator HTH, AraC- type M4S28_20800 IPR037923 Transcription regulator HTH-like M4S28_20800 IPR009057 Homeobox-like domain superfamily M4S28_20800 IPR017853 Glycoside hydrolase superfamily M4S28_20805 IPR022967 RNA-binding domain, S1 M4S28_20805 IPR003029 S1 domain M4S28_20805 IPR022966 Ribonuclease II/R, conserved site M4S28_20805 IPR011129 Cold shock domain M4S28_20805 IPR001900 Ribonuclease II/R M4S28_20805 IPR011804 Ribonuclease II M4S28_20805 IPR013223 Ribonuclease B, N-terminal OB domain M4S28_20805 IPR012340 Nucleic acid-binding, OB-fold M4S28_20805 IPR040476 RNase II/RNase R, cold shock domain M4S28_20805 IPR004476 Ribonuclease II/ribonuclease R M4S28_20810 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_20810 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_20810 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20810 IPR028618 ATP-dependent RNA helicase DeaD M4S28_20810 IPR001650 Helicase, C-terminal M4S28_20810 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_20810 IPR011545 DEAD/DEAH box helicase domain M4S28_20810 IPR034415 CsdA, RNA recognition motif M4S28_20810 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M4S28_20810 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M4S28_20815 IPR000890 Aliphatic acid kinase, short-chain M4S28_20815 IPR023865 Aliphatic acid kinase, short-chain, conserved site M4S28_20815 IPR004372 Acetate/propionate kinase M4S28_20825 IPR005857 Cystathionine beta-synthase M4S28_20825 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_20825 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_20825 IPR000644 CBS domain M4S28_20830 IPR001387 Cro/C1-type helix-turn-helix domain M4S28_20830 IPR013096 Cupin 2, conserved barrel M4S28_20830 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_20830 IPR014710 RmlC-like jelly roll fold M4S28_20830 IPR011051 RmlC-like cupin domain superfamily M4S28_20835 IPR004711 Benzoate transporter M4S28_20855 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site M4S28_20855 IPR020843 Polyketide synthase, enoylreductase domain M4S28_20855 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_20855 IPR011032 GroES-like superfamily M4S28_20855 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 M4S28_20855 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_20855 IPR036291 NAD(P)-binding domain superfamily M4S28_20870 IPR022272 Lipocalin family conserved site M4S28_20870 IPR000183 Ornithine/DAP/Arg decarboxylase M4S28_20870 IPR002433 Ornithine decarboxylase M4S28_20870 IPR029066 PLP-binding barrel M4S28_20870 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal M4S28_20870 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal M4S28_20870 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal M4S28_20875 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal M4S28_20875 IPR022770 Ferric iron reductase FhuF domain M4S28_20875 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like M4S28_20885 IPR022770 Ferric iron reductase FhuF domain M4S28_20885 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal M4S28_20885 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like M4S28_20890 IPR011761 ATP-grasp fold M4S28_20890 IPR003806 ATP-grasp fold, PylC-type M4S28_20890 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain M4S28_20890 IPR024083 Fumarase/histidase, N-terminal M4S28_20890 IPR000362 Fumarate lyase family M4S28_20890 IPR022761 Fumarate lyase, N-terminal M4S28_20890 IPR008948 L-Aspartase-like M4S28_20890 IPR009049 Argininosuccinate lyase M4S28_20895 IPR010105 TonB-dependent siderophore receptor M4S28_20895 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_20895 IPR039423 TonB-dependent receptor-like M4S28_20895 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_20895 IPR012910 TonB-dependent receptor, plug domain M4S28_20895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_20900 IPR012910 TonB-dependent receptor, plug domain M4S28_20900 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_20900 IPR011662 Secretin/TonB, short N-terminal domain M4S28_20900 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_20900 IPR010916 TonB box, conserved site M4S28_20900 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_20900 IPR010917 TonB-dependent receptor, conserved site M4S28_20900 IPR010105 TonB-dependent siderophore receptor M4S28_20905 IPR002491 ABC transporter periplasmic binding domain M4S28_20910 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_20910 IPR037294 ABC transporter, BtuC-like M4S28_20915 IPR037294 ABC transporter, BtuC-like M4S28_20915 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_20920 IPR003593 AAA+ ATPase domain M4S28_20920 IPR003439 ABC transporter-like M4S28_20920 IPR017871 ABC transporter, conserved site M4S28_20920 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_20930 IPR000620 EamA domain M4S28_20935 IPR017853 Glycoside hydrolase superfamily M4S28_20935 IPR006046 Alpha amylase M4S28_20935 IPR006047 Glycosyl hydrolase, family 13, catalytic domain M4S28_20940 IPR002938 FAD-binding domain M4S28_20940 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_20945 IPR036390 Winged helix DNA-binding domain superfamily M4S28_20945 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_20945 IPR000847 Transcription regulator HTH, LysR M4S28_20945 IPR005119 LysR, substrate-binding M4S28_20950 IPR002528 Multi antimicrobial extrusion protein M4S28_20980 IPR005993 GMP reductase M4S28_20980 IPR015875 IMP dehydrogenase / GMP reductase, conserved site M4S28_20980 IPR001093 IMP dehydrogenase/GMP reductase M4S28_20980 IPR013785 Aldolase-type TIM barrel M4S28_20985 IPR013762 Integrase-like, catalytic domain superfamily M4S28_20985 IPR010998 Integrase/recombinase, N-terminal M4S28_20985 IPR002104 Integrase, catalytic domain M4S28_20985 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_20995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_20995 IPR001525 C-5 cytosine methyltransferase M4S28_20995 IPR018117 DNA methylase, C-5 cytosine-specific, active site M4S28_20995 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site M4S28_21025 IPR009679 Bacteriophage 186, CII M4S28_21060 IPR008766 Replication gene A protein M4S28_21085 IPR036266 SecA, Wing/Scaffold superfamily M4S28_21085 IPR036670 SecA, preprotein cross-linking domain superfamily M4S28_21085 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21085 IPR011130 SecA, preprotein cross-linking domain M4S28_21085 IPR004027 SEC-C motif M4S28_21085 IPR000185 Protein translocase subunit SecA M4S28_21085 IPR020937 SecA conserved site M4S28_21085 IPR011115 SecA DEAD-like, N-terminal M4S28_21085 IPR011116 SecA Wing/Scaffold M4S28_21085 IPR014018 SecA motor DEAD M4S28_21090 IPR030935 Phage portal protein PBSX family, Proteobacteria M4S28_21090 IPR006430 Phage portal protein PBSX family M4S28_21235 IPR018117 DNA methylase, C-5 cytosine-specific, active site M4S28_21235 IPR001525 C-5 cytosine methyltransferase M4S28_21235 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site M4S28_21235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_21250 IPR040075 Glutathione S-transferase Theta, N-terminal M4S28_21250 IPR036249 Thioredoxin-like superfamily M4S28_21250 IPR040077 Glutathione S-transferase Theta, C-terminal M4S28_21250 IPR004046 Glutathione S-transferase, C-terminal M4S28_21250 IPR004045 Glutathione S-transferase, N-terminal M4S28_21250 IPR040079 Glutathione Transferase family M4S28_21250 IPR010987 Glutathione S-transferase, C-terminal-like M4S28_21250 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_21275 IPR000620 EamA domain M4S28_21275 IPR004779 Carboxylate/Amino Acid/Amine Transporter M4S28_21280 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase M4S28_21280 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase M4S28_21280 IPR029056 Ribokinase-like M4S28_21285 IPR017871 ABC transporter, conserved site M4S28_21285 IPR003593 AAA+ ATPase domain M4S28_21285 IPR003439 ABC transporter-like M4S28_21285 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_21290 IPR035906 MetI-like superfamily M4S28_21295 IPR015168 SsuA/THI5-like M4S28_21295 IPR027939 NMT1/THI5 family M4S28_21300 IPR016084 Haem oxygenase-like, multi-helical M4S28_21300 IPR004305 Thiaminase-2/PQQC M4S28_21300 IPR027574 Thiaminase II M4S28_21305 IPR000417 Hydroxyethylthiazole kinase M4S28_21305 IPR029056 Ribokinase-like M4S28_21310 IPR003660 HAMP domain M4S28_21310 IPR029151 Periplasmic sensor-like domain superfamily M4S28_21310 IPR000727 Target SNARE coiled-coil homology domain M4S28_21310 IPR033479 Double Cache domain 1 M4S28_21310 IPR004090 Chemotaxis methyl-accepting receptor M4S28_21310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_21315 IPR013785 Aldolase-type TIM barrel M4S28_21315 IPR036206 Thiamin phosphate synthase superfamily M4S28_21315 IPR022998 Thiamine phosphate synthase/TenI M4S28_21315 IPR034291 Thiamine phosphate synthase M4S28_21325 IPR036390 Winged helix DNA-binding domain superfamily M4S28_21325 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_21325 IPR005119 LysR, substrate-binding M4S28_21325 IPR000847 Transcription regulator HTH, LysR M4S28_21335 IPR009057 Homeobox-like domain superfamily M4S28_21335 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M4S28_21335 IPR018060 DNA binding HTH domain, AraC-type M4S28_21340 IPR006680 Amidohydrolase-related M4S28_21340 IPR004722 Dihydroorotase M4S28_21340 IPR002195 Dihydroorotase, conserved site M4S28_21340 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_21340 IPR032466 Metal-dependent hydrolase M4S28_21365 IPR029787 Nucleotide cyclase M4S28_21365 IPR000160 GGDEF domain M4S28_21365 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M4S28_21375 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA M4S28_21375 IPR006143 RND efflux pump, membrane fusion protein M4S28_21375 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_21385 IPR002549 Transmembrane protein TqsA-like M4S28_21415 IPR002491 ABC transporter periplasmic binding domain M4S28_21415 IPR033870 FatB domain M4S28_21420 IPR037294 ABC transporter, BtuC-like M4S28_21420 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_21425 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_21425 IPR037294 ABC transporter, BtuC-like M4S28_21430 IPR003439 ABC transporter-like M4S28_21430 IPR003593 AAA+ ATPase domain M4S28_21430 IPR017871 ABC transporter, conserved site M4S28_21430 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21435 IPR001789 Signal transduction response regulator, receiver domain M4S28_21435 IPR037522 HD-GYP domain M4S28_21435 IPR003607 HD/PDEase domain M4S28_21435 IPR011006 CheY-like superfamily M4S28_21440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_21440 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_21440 IPR001789 Signal transduction response regulator, receiver domain M4S28_21440 IPR033414 Periplasmic sensor domain M4S28_21440 IPR036641 HPT domain superfamily M4S28_21440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_21440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_21440 IPR005467 Histidine kinase domain M4S28_21440 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_21440 IPR003660 HAMP domain M4S28_21440 IPR011006 CheY-like superfamily M4S28_21440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_21445 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_21445 IPR036390 Winged helix DNA-binding domain superfamily M4S28_21445 IPR005119 LysR, substrate-binding M4S28_21445 IPR000847 Transcription regulator HTH, LysR M4S28_21450 IPR011701 Major facilitator superfamily M4S28_21450 IPR020846 Major facilitator superfamily domain M4S28_21450 IPR036259 MFS transporter superfamily M4S28_21455 IPR035986 PKD domain superfamily M4S28_21455 IPR008757 Peptidase M6-like, domain M4S28_21455 IPR013783 Immunoglobulin-like fold M4S28_21455 IPR012300 Peptidase M6, InhA M4S28_21455 IPR000601 PKD domain M4S28_21455 IPR022409 PKD/Chitinase domain M4S28_21470 IPR011008 Dimeric alpha-beta barrel M4S28_21470 IPR000485 AsnC-type HTH domain M4S28_21470 IPR036390 Winged helix DNA-binding domain superfamily M4S28_21470 IPR019888 Transcription regulator AsnC-type M4S28_21470 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_21470 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_21470 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_21470 IPR011991 ArsR-like helix-turn-helix domain M4S28_21475 IPR004090 Chemotaxis methyl-accepting receptor M4S28_21475 IPR003660 HAMP domain M4S28_21475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_21475 IPR001610 PAC motif M4S28_21475 IPR000014 PAS domain M4S28_21475 IPR035965 PAS domain superfamily M4S28_21475 IPR013655 PAS fold-3 M4S28_21480 IPR005474 Transketolase, N-terminal M4S28_21480 IPR033247 Transketolase family M4S28_21480 IPR029061 Thiamin diphosphate-binding fold M4S28_21480 IPR033248 Transketolase, C-terminal domain M4S28_21480 IPR020826 Transketolase binding site M4S28_21480 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II M4S28_21480 IPR005475 Transketolase-like, pyrimidine-binding domain M4S28_21480 IPR005478 Transketolase, bacterial-like M4S28_21485 IPR013785 Aldolase-type TIM barrel M4S28_21485 IPR001585 Transaldolase/Fructose-6-phosphate aldolase M4S28_21485 IPR004730 Transaldolase type 1 M4S28_21485 IPR018225 Transaldolase, active site M4S28_21500 IPR012337 Ribonuclease H-like superfamily M4S28_21500 IPR001584 Integrase, catalytic core M4S28_21505 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21505 IPR002611 IstB-like ATP-binding protein M4S28_21505 IPR003593 AAA+ ATPase domain M4S28_21505 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein M4S28_21510 IPR036390 Winged helix DNA-binding domain superfamily M4S28_21510 IPR000847 Transcription regulator HTH, LysR M4S28_21510 IPR020890 Transcription regulator HTH, HdfR M4S28_21510 IPR005119 LysR, substrate-binding M4S28_21510 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_21530 IPR007055 BON domain M4S28_21530 IPR001775 GspD/PilQ family M4S28_21530 IPR004846 Type II/III secretion system M4S28_21530 IPR032789 Pilus formation protein, N-terminal M4S28_21530 IPR014004 Transport-associated and nodulation domain, bacteria M4S28_21545 IPR022399 Helicase/secretion neighbourhood ATPase M4S28_21545 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21545 IPR001482 Type II/IV secretion system protein M4S28_21585 IPR029787 Nucleotide cyclase M4S28_21585 IPR000160 GGDEF domain M4S28_21585 IPR029016 GAF-like domain superfamily M4S28_21585 IPR003018 GAF domain M4S28_21585 IPR035919 EAL domain superfamily M4S28_21585 IPR001633 EAL domain M4S28_21585 IPR013515 Phytochrome, central region M4S28_21585 IPR001294 Phytochrome M4S28_21585 IPR016132 Phytochrome chromophore attachment domain M4S28_21590 IPR001307 Thiosulphate sulfurtransferase, conserved site M4S28_21590 IPR036873 Rhodanese-like domain superfamily M4S28_21590 IPR001763 Rhodanese-like domain M4S28_21610 IPR012730 Molybdopterin synthase sulfurylase MoeB M4S28_21610 IPR000594 THIF-type NAD/FAD binding fold M4S28_21610 IPR035985 Ubiquitin-activating enzyme M4S28_21615 IPR036425 MoaB/Mog-like domain superfamily M4S28_21615 IPR001453 MoaB/Mog domain M4S28_21615 IPR008284 Molybdenum cofactor biosynthesis, conserved site M4S28_21615 IPR038987 Molybdopterin biosynthesis protein MoeA-like M4S28_21615 IPR005111 MoeA, C-terminal, domain IV M4S28_21615 IPR036688 MoeA, C-terminal, domain IV superfamily M4S28_21615 IPR005110 MoeA, N-terminal and linker domain M4S28_21615 IPR036135 MoeA, N-terminal and linker domain superfamily M4S28_21620 IPR001474 GTP cyclohydrolase I M4S28_21620 IPR018234 GTP cyclohydrolase I, conserved site M4S28_21620 IPR020602 GTP cyclohydrolase I domain M4S28_21630 IPR038590 YaeQ superfamily M4S28_21630 IPR011335 Restriction endonuclease type II-like M4S28_21630 IPR009822 YaeQ M4S28_21670 IPR035089 Tail sheath protein, subtilisin-like domain M4S28_21670 IPR007067 Tail sheath protein M4S28_21670 IPR020287 Tail sheath protein, C-terminal domain M4S28_21710 IPR030935 Phage portal protein PBSX family, Proteobacteria M4S28_21710 IPR006430 Phage portal protein PBSX family M4S28_21770 IPR009826 DNA circulation, N-terminal M4S28_21825 IPR009679 Bacteriophage 186, CII M4S28_21860 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_21860 IPR004107 Integrase, SAM-like, N-terminal M4S28_21860 IPR013762 Integrase-like, catalytic domain superfamily M4S28_21860 IPR011931 Tyrosine recombinase XerC M4S28_21860 IPR010998 Integrase/recombinase, N-terminal M4S28_21860 IPR023009 Tyrosine recombinase XerC/XerD M4S28_21860 IPR002104 Integrase, catalytic domain M4S28_21865 IPR002059 Cold-shock protein, DNA-binding M4S28_21865 IPR012340 Nucleic acid-binding, OB-fold M4S28_21865 IPR011129 Cold shock domain M4S28_21865 IPR012156 Cold shock, CspA M4S28_21865 IPR019844 Cold-shock (CSD) domain M4S28_21870 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase M4S28_21870 IPR011042 Six-bladed beta-propeller, TolB-like M4S28_21870 IPR012938 Glucose/Sorbosone dehydrogenase M4S28_21875 IPR011701 Major facilitator superfamily M4S28_21875 IPR020846 Major facilitator superfamily domain M4S28_21875 IPR036259 MFS transporter superfamily M4S28_21875 IPR023697 Multidrug resistance protein MdtL M4S28_21880 IPR003593 AAA+ ATPase domain M4S28_21880 IPR003439 ABC transporter-like M4S28_21880 IPR017871 ABC transporter, conserved site M4S28_21880 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21890 IPR018062 HTH domain AraC-type, conserved site M4S28_21890 IPR009057 Homeobox-like domain superfamily M4S28_21890 IPR018060 DNA binding HTH domain, AraC-type M4S28_21890 IPR020449 Transcription regulator HTH, AraC- type M4S28_21895 IPR012910 TonB-dependent receptor, plug domain M4S28_21895 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_21895 IPR039423 TonB-dependent receptor-like M4S28_21895 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_21895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_21895 IPR010105 TonB-dependent siderophore receptor M4S28_21905 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_21905 IPR037294 ABC transporter, BtuC-like M4S28_21910 IPR029045 ClpP/crotonase-like domain superfamily M4S28_21910 IPR001753 Enoyl-CoA hydratase/isomerase M4S28_21910 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site M4S28_21925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_21925 IPR004839 Aminotransferase, class I/classII M4S28_21925 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site M4S28_21925 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_21925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_21925 IPR022518 Aspartate 4-decarboxylase M4S28_21930 IPR022457 Aspartate-alanine antiporter M4S28_21930 IPR006512 YidE/YbjL duplication M4S28_21930 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_21930 IPR006037 Regulator of K+ conductance, C-terminal M4S28_21940 IPR006143 RND efflux pump, membrane fusion protein M4S28_21940 IPR022824 Multidrug resistance protein MdtA M4S28_21940 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_21945 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_21945 IPR001036 Acriflavin resistance protein M4S28_21955 IPR036541 Phospholipase A1 superfamily M4S28_21955 IPR003187 Phospholipase A1 M4S28_21960 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_21960 IPR039420 Transcriptional regulatory protein WalR-like M4S28_21960 IPR040970 CadC C-terminal domain 1 M4S28_21960 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_21960 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_21960 IPR011990 Tetratricopeptide-like helical domain superfamily M4S28_21970 IPR013785 Aldolase-type TIM barrel M4S28_21970 IPR023663 NADPH dehydrogenase M4S28_21970 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal M4S28_21975 IPR001451 Hexapeptide repeat M4S28_21975 IPR018357 Hexapeptide transferase, conserved site M4S28_21975 IPR011004 Trimeric LpxA-like superfamily M4S28_21985 IPR039421 Type I protein exporter M4S28_21985 IPR003593 AAA+ ATPase domain M4S28_21985 IPR017871 ABC transporter, conserved site M4S28_21985 IPR003439 ABC transporter-like M4S28_21985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_21985 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_21985 IPR011527 ABC transporter type 1, transmembrane domain M4S28_21990 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_21990 IPR010129 Type I secretion membrane fusion protein, HlyD family M4S28_22010 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_22010 IPR006143 RND efflux pump, membrane fusion protein M4S28_22015 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_22015 IPR001036 Acriflavin resistance protein M4S28_22015 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA M4S28_22050 IPR013987 PhnA protein, N-terminal M4S28_22050 IPR013988 PhnA protein, C-terminal M4S28_22050 IPR004624 PhnA protein M4S28_22075 IPR003313 AraC-type arabinose-binding/dimerisation domain M4S28_22075 IPR009057 Homeobox-like domain superfamily M4S28_22075 IPR037923 Transcription regulator HTH-like M4S28_22075 IPR018060 DNA binding HTH domain, AraC-type M4S28_22075 IPR018062 HTH domain AraC-type, conserved site M4S28_22075 IPR014710 RmlC-like jelly roll fold M4S28_22075 IPR020449 Transcription regulator HTH, AraC- type M4S28_22075 IPR023609 Transcription regulator HTH, RhaS M4S28_22080 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_22080 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_22080 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_22080 IPR010917 TonB-dependent receptor, conserved site M4S28_22080 IPR012910 TonB-dependent receptor, plug domain M4S28_22080 IPR006970 PT repeat M4S28_22080 IPR039426 Vitamin B12 transporter BtuB-like M4S28_22090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_22090 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_22090 IPR035906 MetI-like superfamily M4S28_22095 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M4S28_22095 IPR001320 Ionotropic glutamate receptor M4S28_22095 IPR018313 Solute-binding protein family 3, conserved site M4S28_22100 IPR035906 MetI-like superfamily M4S28_22100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_22100 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain M4S28_22105 IPR003593 AAA+ ATPase domain M4S28_22105 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22105 IPR017871 ABC transporter, conserved site M4S28_22105 IPR003439 ABC transporter-like M4S28_22105 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type M4S28_22110 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M4S28_22110 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M4S28_22115 IPR009057 Homeobox-like domain superfamily M4S28_22115 IPR018060 DNA binding HTH domain, AraC-type M4S28_22115 IPR009594 Transcription regulator HTH, AraC, N-terminal M4S28_22135 IPR006175 YjgF/YER057c/UK114 family M4S28_22135 IPR035959 RutC-like superfamily M4S28_22135 IPR019897 RidA, conserved site M4S28_22135 IPR006056 RidA family M4S28_22150 IPR039369 Galactoside O-acetyltransferase LacA-like M4S28_22150 IPR001451 Hexapeptide repeat M4S28_22150 IPR011004 Trimeric LpxA-like superfamily M4S28_22150 IPR024688 Maltose/galactoside acetyltransferase M4S28_22170 IPR016865 Inner membrane protein RclC M4S28_22170 IPR007339 Inner membrane protein RclC-like M4S28_22175 IPR019897 RidA, conserved site M4S28_22175 IPR035959 RutC-like superfamily M4S28_22175 IPR006175 YjgF/YER057c/UK114 family M4S28_22175 IPR019898 Putative aminoacrylate peracid reductase RutC M4S28_22180 IPR000060 BCCT transporter family M4S28_22190 IPR013783 Immunoglobulin-like fold M4S28_22190 IPR001223 Glycoside hydrolase family 18, catalytic domain M4S28_22190 IPR029070 Chitinase insertion domain superfamily M4S28_22190 IPR011583 Chitinase II M4S28_22190 IPR036573 Carbohydrate-binding module superfamily 5/12 M4S28_22190 IPR003610 Carbohydrate-binding module family 5/12 M4S28_22190 IPR017853 Glycoside hydrolase superfamily M4S28_22190 IPR009470 Chitinase, C-terminal M4S28_22195 IPR029787 Nucleotide cyclase M4S28_22195 IPR000160 GGDEF domain M4S28_22195 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region M4S28_22210 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily M4S28_22210 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal M4S28_22210 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A M4S28_22210 IPR015956 Penicillin-binding protein, C-terminal domain superfamily M4S28_22210 IPR012338 Beta-lactamase/transpeptidase-like M4S28_22210 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal M4S28_22220 IPR005119 LysR, substrate-binding M4S28_22220 IPR000847 Transcription regulator HTH, LysR M4S28_22220 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22220 IPR036390 Winged helix DNA-binding domain superfamily M4S28_22230 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_22230 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_22230 IPR006225 Pseudouridine synthase, RluC/RluD M4S28_22230 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_22240 IPR041694 Oxidoreductase, N-terminal domain M4S28_22240 IPR020843 Polyketide synthase, enoylreductase domain M4S28_22240 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_22240 IPR036291 NAD(P)-binding domain superfamily M4S28_22240 IPR011032 GroES-like superfamily M4S28_22245 IPR009057 Homeobox-like domain superfamily M4S28_22245 IPR001647 DNA-binding HTH domain, TetR-type M4S28_22245 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M4S28_22245 IPR011075 Tetracyclin repressor-like, C-terminal domain M4S28_22250 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal M4S28_22250 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M4S28_22250 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily M4S28_22260 IPR006665 OmpA-like domain M4S28_22260 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_22260 IPR036737 OmpA-like domain superfamily M4S28_22260 IPR006664 Outer membrane protein, bacterial M4S28_22260 IPR007055 BON domain M4S28_22270 IPR009057 Homeobox-like domain superfamily M4S28_22270 IPR003018 GAF domain M4S28_22270 IPR003593 AAA+ ATPase domain M4S28_22270 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22270 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_22270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_22270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_22270 IPR025944 Sigma-54 interaction domain, conserved site M4S28_22270 IPR029016 GAF-like domain superfamily M4S28_22275 IPR017938 Riboflavin synthase-like beta-barrel M4S28_22275 IPR023950 Flavohemoprotein M4S28_22275 IPR012292 Globin/Protoglobin M4S28_22275 IPR009050 Globin-like superfamily M4S28_22275 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_22275 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase M4S28_22275 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_22275 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M4S28_22275 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_22275 IPR000971 Globin M4S28_22285 IPR023861 Chloride channel, ClcA M4S28_22285 IPR014743 Chloride channel, core M4S28_22285 IPR001807 Chloride channel, voltage gated M4S28_22290 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M4S28_22290 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22290 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal M4S28_22295 IPR011545 DEAD/DEAH box helicase domain M4S28_22295 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_22295 IPR028622 ATP-dependent RNA helicase RhlE M4S28_22295 IPR001650 Helicase, C-terminal M4S28_22295 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22295 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_22295 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_22300 IPR001123 Amino acid exporter protein, LeuE-type M4S28_22325 IPR011006 CheY-like superfamily M4S28_22325 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_22325 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_22325 IPR001789 Signal transduction response regulator, receiver domain M4S28_22325 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22325 IPR039420 Transcriptional regulatory protein WalR-like M4S28_22330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_22330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_22330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_22330 IPR005467 Histidine kinase domain M4S28_22330 IPR003660 HAMP domain M4S28_22330 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_22330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_22345 IPR011991 ArsR-like helix-turn-helix domain M4S28_22345 IPR019888 Transcription regulator AsnC-type M4S28_22345 IPR011008 Dimeric alpha-beta barrel M4S28_22345 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_22345 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_22345 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22345 IPR036390 Winged helix DNA-binding domain superfamily M4S28_22345 IPR000485 AsnC-type HTH domain M4S28_22370 IPR011031 Multihaem cytochrome M4S28_22370 IPR005126 NapC/NirT cytochrome c, N-terminal M4S28_22370 IPR036280 Multiheme cytochrome superfamily M4S28_22370 IPR024717 Denitrification system component NapC/NirT/NrfH M4S28_22370 IPR038266 NapC/NirT cytochrome c superfamily M4S28_22370 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT M4S28_22375 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M4S28_22375 IPR036280 Multiheme cytochrome superfamily M4S28_22375 IPR011031 Multihaem cytochrome M4S28_22380 IPR010051 Periplasmic nitrate reductase, large subunit M4S28_22380 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_22380 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_22380 IPR006656 Molybdopterin oxidoreductase M4S28_22380 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_22380 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain M4S28_22380 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_22380 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site M4S28_22390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_22390 IPR004496 Ferredoxin-type protein NapF M4S28_22390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_22395 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain M4S28_22395 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing M4S28_22395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_22395 IPR029095 NarX-like, N-terminal M4S28_22395 IPR003660 HAMP domain M4S28_22395 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_22395 IPR005467 Histidine kinase domain M4S28_22395 IPR042295 NarX-like, N-terminal domain superfamily M4S28_22400 IPR011006 CheY-like superfamily M4S28_22400 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_22400 IPR001789 Signal transduction response regulator, receiver domain M4S28_22400 IPR000792 Transcription regulator LuxR, C-terminal M4S28_22405 IPR004669 C4-dicarboxylate anaerobic carrier M4S28_22405 IPR018385 C4-dicarboxylate anaerobic carrier-like M4S28_22420 IPR025920 Bacterial virulence factor lipase, N-terminal domain M4S28_22420 IPR020009 Extracellular lipase, Pla-1/cef family M4S28_22420 IPR029058 Alpha/Beta hydrolase fold M4S28_22425 IPR042117 OMPP1/FadL/TodX superfamily M4S28_22425 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M4S28_22430 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_22430 IPR006143 RND efflux pump, membrane fusion protein M4S28_22435 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_22435 IPR001036 Acriflavin resistance protein M4S28_22455 IPR000524 Transcription regulator HTH, GntR M4S28_22455 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_22455 IPR011663 UbiC transcription regulator-associated M4S28_22455 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22455 IPR036390 Winged helix DNA-binding domain superfamily M4S28_22460 IPR006327 Phosphotransferase system, fructose IIC component M4S28_22460 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M4S28_22460 IPR004715 Phosphotransferase system, IIA component fructose subfamily M4S28_22460 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_22460 IPR003352 Phosphotransferase system, EIIC M4S28_22460 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_22460 IPR036095 PTS system IIB component-like superfamily M4S28_22460 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_22460 IPR016152 Phosphotransferase/anion transporter M4S28_22460 IPR002178 PTS EIIA type-2 domain M4S28_22465 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily M4S28_22465 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily M4S28_22465 IPR000602 Glycoside hydrolase family 38, N-terminal domain M4S28_22465 IPR037094 Glycoside hydrolase family 38, central domain superfamily M4S28_22465 IPR015341 Glycoside hydrolase family 38, central domain M4S28_22465 IPR011682 Glycosyl hydrolase family 38, C-terminal M4S28_22465 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M4S28_22465 IPR011013 Galactose mutarotase-like domain superfamily M4S28_22470 IPR018193 Glycerate kinase, flavodoxin-like fold M4S28_22470 IPR018197 Glycerate kinase, restriction-enzyme-like fold M4S28_22470 IPR004381 Glycerate kinase M4S28_22470 IPR036129 Glycerate kinase superfamily M4S28_22475 IPR016305 Mannose-6-phosphate isomerase M4S28_22475 IPR014710 RmlC-like jelly roll fold M4S28_22475 IPR001250 Mannose-6-phosphate isomerase, type I M4S28_22475 IPR011051 RmlC-like cupin domain superfamily M4S28_22475 IPR018050 Phosphomannose isomerase, type I, conserved site M4S28_22500 IPR029787 Nucleotide cyclase M4S28_22500 IPR007894 MASE2 M4S28_22500 IPR000160 GGDEF domain M4S28_22505 IPR006073 GTP binding domain M4S28_22505 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain M4S28_22505 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily M4S28_22505 IPR019991 GTP-binding protein, ribosome biogenesis M4S28_22505 IPR016478 GTPase, MTG1 M4S28_22505 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22510 IPR011055 Duplicated hybrid motif M4S28_22510 IPR018392 LysM domain M4S28_22510 IPR013731 Opacity-associated protein A, N-terminal M4S28_22510 IPR016047 Peptidase M23 M4S28_22535 IPR002197 DNA binding HTH domain, Fis-type M4S28_22535 IPR003018 GAF domain M4S28_22535 IPR009057 Homeobox-like domain superfamily M4S28_22535 IPR003593 AAA+ ATPase domain M4S28_22535 IPR025944 Sigma-54 interaction domain, conserved site M4S28_22535 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M4S28_22535 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M4S28_22535 IPR002078 RNA polymerase sigma factor 54 interaction domain M4S28_22535 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22535 IPR029016 GAF-like domain superfamily M4S28_22540 IPR041546 ClpA/ClpB, AAA lid domain M4S28_22540 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22540 IPR001270 ClpA/B family M4S28_22540 IPR004176 Clp, N-terminal M4S28_22540 IPR036628 Clp, N-terminal domain superfamily M4S28_22540 IPR003593 AAA+ ATPase domain M4S28_22540 IPR003959 ATPase, AAA-type, core M4S28_22540 IPR019489 Clp ATPase, C-terminal M4S28_22540 IPR017729 Type VI secretion system, ATPase ClpV1 M4S28_22540 IPR018368 ClpA/B, conserved site 1 M4S28_22545 IPR036624 Hcp1-like superfamily M4S28_22545 IPR008514 Type VI secretion system effector, Hcp M4S28_22550 IPR006531 Gp5 N-terminal M4S28_22550 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M4S28_22550 IPR037026 Vgr protein, OB-fold domain superfamily M4S28_22550 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M4S28_22575 IPR000719 Protein kinase domain M4S28_22575 IPR005543 PASTA domain M4S28_22575 IPR011009 Protein kinase-like domain superfamily M4S28_22575 IPR008271 Serine/threonine-protein kinase, active site M4S28_22575 IPR017441 Protein kinase, ATP binding site M4S28_22590 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M4S28_22600 IPR010272 Type VI secretion system, TssF-like M4S28_22610 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22610 IPR011991 ArsR-like helix-turn-helix domain M4S28_22610 IPR000485 AsnC-type HTH domain M4S28_22610 IPR011008 Dimeric alpha-beta barrel M4S28_22610 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M4S28_22610 IPR036390 Winged helix DNA-binding domain superfamily M4S28_22610 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M4S28_22610 IPR019888 Transcription regulator AsnC-type M4S28_22640 IPR010263 Type VI secretion protein, VC_A0114 M4S28_22695 IPR008168 Cytochrome c, class IC M4S28_22695 IPR036909 Cytochrome c-like domain superfamily M4S28_22695 IPR009056 Cytochrome c-like domain M4S28_22700 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_22700 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22700 IPR000792 Transcription regulator LuxR, C-terminal M4S28_22735 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_22735 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_22735 IPR023603 Threonine aldolase M4S28_22735 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_22735 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase M4S28_22740 IPR020084 NUDIX hydrolase, conserved site M4S28_22740 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_22740 IPR020476 NUDIX hydrolase M4S28_22740 IPR000086 NUDIX hydrolase domain M4S28_22745 IPR003593 AAA+ ATPase domain M4S28_22745 IPR023671 ATPase RavA M4S28_22745 IPR022547 ATPase, RavA, C-terminal M4S28_22745 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22745 IPR041538 ATPase RavA-like, AAA lid domain M4S28_22745 IPR011704 ATPase, dynein-related, AAA domain M4S28_22750 IPR008912 Uncharacterised protein family CoxE-like M4S28_22750 IPR036465 von Willebrand factor A-like domain superfamily M4S28_22750 IPR002035 von Willebrand factor, type A M4S28_22750 IPR023481 Uncharacterised protein family ViaA M4S28_22775 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_22775 IPR003660 HAMP domain M4S28_22825 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M4S28_22825 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M4S28_22825 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal M4S28_22825 IPR017121 Nitrite reductase [NAD(P)H], large subunit M4S28_22825 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M4S28_22825 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M4S28_22825 IPR007419 BFD-like [2Fe-2S]-binding domain M4S28_22825 IPR023753 FAD/NAD(P)-binding domain M4S28_22825 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily M4S28_22825 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_22825 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB M4S28_22830 IPR017881 Nitrite reductase (NADH) small subunit M4S28_22830 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type M4S28_22830 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily M4S28_22835 IPR000292 Formate/nitrite transporter M4S28_22835 IPR024002 Formate/nitrite transporter, conserved site M4S28_22835 IPR023999 Formate transporter FocA, putative M4S28_22835 IPR023271 Aquaporin-like M4S28_22840 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site M4S28_22840 IPR006367 Sirohaem synthase, N-terminal M4S28_22840 IPR019478 Sirohaem synthase, dimerisation domain M4S28_22840 IPR012409 Sirohaem synthase M4S28_22840 IPR037115 Sirohaem synthase, dimerisation domain superfamily M4S28_22840 IPR028281 Siroheme synthase, central domain M4S28_22840 IPR006366 Uroporphyrin-III C-methyltransferase M4S28_22840 IPR014776 Tetrapyrrole methylase, subdomain 2 M4S28_22840 IPR014777 Tetrapyrrole methylase, subdomain 1 M4S28_22840 IPR035996 Tetrapyrrole methylase superfamily M4S28_22840 IPR036291 NAD(P)-binding domain superfamily M4S28_22840 IPR000878 Tetrapyrrole methylase M4S28_22855 IPR011006 CheY-like superfamily M4S28_22855 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_22855 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22855 IPR039420 Transcriptional regulatory protein WalR-like M4S28_22855 IPR001789 Signal transduction response regulator, receiver domain M4S28_22855 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_22860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_22860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_22860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_22860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_22860 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_22860 IPR003660 HAMP domain M4S28_22860 IPR038515 CpxA, periplasmic domain superfamily M4S28_22860 IPR032404 Two-component sensor protein CpxA, periplasmic domain M4S28_22860 IPR005467 Histidine kinase domain M4S28_22865 IPR036458 Sodium:dicarboxylate symporter superfamily M4S28_22865 IPR018107 Sodium:dicarboxylate symporter, conserved site M4S28_22865 IPR001991 Sodium:dicarboxylate symporter M4S28_22865 IPR034703 Proton/glutamate-aspartate symporter GltP M4S28_22865 IPR033380 Glutamate-aspartate symport protein GltP/GltT M4S28_22870 IPR039423 TonB-dependent receptor-like M4S28_22870 IPR010105 TonB-dependent siderophore receptor M4S28_22870 IPR010917 TonB-dependent receptor, conserved site M4S28_22870 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_22870 IPR010916 TonB box, conserved site M4S28_22870 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_22870 IPR012910 TonB-dependent receptor, plug domain M4S28_22870 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_22880 IPR002898 MotA/TolQ/ExbB proton channel M4S28_22885 IPR002898 MotA/TolQ/ExbB proton channel M4S28_22890 IPR003400 Biopolymer transport protein ExbD/TolR M4S28_22935 IPR006128 Adhesion lipoprotein M4S28_22935 IPR006129 Adhesin B M4S28_22935 IPR006127 Periplasmic solute binding protein, ZnuA-like M4S28_22940 IPR003593 AAA+ ATPase domain M4S28_22940 IPR003439 ABC transporter-like M4S28_22940 IPR017871 ABC transporter, conserved site M4S28_22940 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_22945 IPR037294 ABC transporter, BtuC-like M4S28_22945 IPR001626 ABC transporter, TroCD-like M4S28_22945 IPR036390 Winged helix DNA-binding domain superfamily M4S28_22945 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_22965 IPR020483 Uncharacterised protein family YgbA M4S28_22970 IPR002528 Multi antimicrobial extrusion protein M4S28_22990 IPR011701 Major facilitator superfamily M4S28_22990 IPR023745 MSF-type transporter, YcaD M4S28_22990 IPR036259 MFS transporter superfamily M4S28_22990 IPR020846 Major facilitator superfamily domain M4S28_22995 IPR009057 Homeobox-like domain superfamily M4S28_22995 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M4S28_22995 IPR018060 DNA binding HTH domain, AraC-type M4S28_22995 IPR020449 Transcription regulator HTH, AraC- type M4S28_23000 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_23000 IPR020459 AMP-binding M4S28_23000 IPR020845 AMP-binding, conserved site M4S28_23000 IPR000873 AMP-dependent synthetase/ligase M4S28_23000 IPR042099 AMP-dependent synthetase-like superfamily M4S28_23005 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal M4S28_23005 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal M4S28_23005 IPR012132 Glucose-methanol-choline oxidoreductase M4S28_23005 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_23005 IPR027424 Glucose Oxidase, domain 2 M4S28_23010 IPR017937 Thioredoxin, conserved site M4S28_23010 IPR036249 Thioredoxin-like superfamily M4S28_23010 IPR005746 Thioredoxin M4S28_23010 IPR013766 Thioredoxin domain M4S28_23015 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 M4S28_23015 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal M4S28_23015 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M4S28_23015 IPR016039 Thiolase-like M4S28_23030 IPR007272 Sulphur transport domain M4S28_23045 IPR005144 ATP-cone domain M4S28_23045 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M4S28_23045 IPR001150 Glycine radical domain M4S28_23045 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic M4S28_23050 IPR013785 Aldolase-type TIM barrel M4S28_23050 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic M4S28_23050 IPR007197 Radical SAM M4S28_23050 IPR034457 Organic radical-activating enzymes M4S28_23050 IPR001989 Radical-activating enzyme, conserved site M4S28_23055 IPR002528 Multi antimicrobial extrusion protein M4S28_23060 IPR029062 Class I glutamine amidotransferase-like M4S28_23060 IPR009057 Homeobox-like domain superfamily M4S28_23060 IPR018060 DNA binding HTH domain, AraC-type M4S28_23060 IPR018062 HTH domain AraC-type, conserved site M4S28_23060 IPR020449 Transcription regulator HTH, AraC- type M4S28_23065 IPR000796 Aspartate/other aminotransferase M4S28_23065 IPR004839 Aminotransferase, class I/classII M4S28_23065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_23065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_23065 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_23070 IPR011761 ATP-grasp fold M4S28_23070 IPR013815 ATP-grasp fold, subdomain 1 M4S28_23070 IPR013651 ATP-grasp fold, RimK-type M4S28_23070 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX M4S28_23070 IPR041107 RimK, PreATP-grasp domain M4S28_23070 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M4S28_23070 IPR021109 Aspartic peptidase domain superfamily M4S28_23075 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23075 IPR003439 ABC transporter-like M4S28_23075 IPR032781 ABC-transporter extension domain M4S28_23075 IPR003593 AAA+ ATPase domain M4S28_23090 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 M4S28_23090 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M4S28_23090 IPR017929 CobB/CobQ glutamine amidotransferase M4S28_23090 IPR029062 Class I glutamine amidotransferase-like M4S28_23090 IPR004459 Cobyric acid synthase CobQ M4S28_23090 IPR011698 CobB/CobQ-like glutamine amidotransferase M4S28_23090 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23095 IPR005950 Molybdate ABC transporter, substrate-binding protein M4S28_23100 IPR035906 MetI-like superfamily M4S28_23100 IPR011867 Molybdate ABC transporter, permease protein M4S28_23100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_23105 IPR003593 AAA+ ATPase domain M4S28_23105 IPR005116 Transport-associated OB, type 1 M4S28_23105 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23105 IPR004606 Molybdenum-pterin binding M4S28_23105 IPR011868 Molybdate ABC transporter, ATP-binding protein M4S28_23105 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_23105 IPR017871 ABC transporter, conserved site M4S28_23105 IPR003439 ABC transporter-like M4S28_23105 IPR015852 ABC transporter, molybdenum import, ModC M4S28_23115 IPR029787 Nucleotide cyclase M4S28_23115 IPR016132 Phytochrome chromophore attachment domain M4S28_23115 IPR003018 GAF domain M4S28_23115 IPR035919 EAL domain superfamily M4S28_23115 IPR001294 Phytochrome M4S28_23115 IPR013515 Phytochrome, central region M4S28_23115 IPR001633 EAL domain M4S28_23115 IPR000160 GGDEF domain M4S28_23115 IPR029016 GAF-like domain superfamily M4S28_23125 IPR029787 Nucleotide cyclase M4S28_23125 IPR033424 Membrane-associated sensor domain M4S28_23125 IPR000160 GGDEF domain M4S28_23140 IPR026255 NAD(P) transhydrogenase, alpha subunit M4S28_23140 IPR036291 NAD(P)-binding domain superfamily M4S28_23140 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M4S28_23140 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M4S28_23140 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 M4S28_23140 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 M4S28_23140 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal M4S28_23145 IPR034300 NADP transhydrogenase beta-like domain M4S28_23145 IPR012136 NADP transhydrogenase, beta subunit M4S28_23145 IPR029035 DHS-like NAD/FAD-binding domain superfamily M4S28_23155 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23155 IPR039420 Transcriptional regulatory protein WalR-like M4S28_23155 IPR001789 Signal transduction response regulator, receiver domain M4S28_23155 IPR011006 CheY-like superfamily M4S28_23155 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_23170 IPR005371 Uncharacterised protein family UPF0181 M4S28_23175 IPR013656 PAS fold-4 M4S28_23175 IPR000700 PAS-associated, C-terminal M4S28_23175 IPR000014 PAS domain M4S28_23175 IPR000160 GGDEF domain M4S28_23175 IPR035965 PAS domain superfamily M4S28_23175 IPR029787 Nucleotide cyclase M4S28_23210 IPR005872 Archaeal/bacterial translation initiation factor SUI1 M4S28_23210 IPR001950 SUI1 domain M4S28_23210 IPR036877 SUI1 domain superfamily M4S28_23225 IPR013815 ATP-grasp fold, subdomain 1 M4S28_23225 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site M4S28_23225 IPR011095 D-alanine--D-alanine ligase, C-terminal M4S28_23225 IPR011127 D-alanine--D-alanine ligase, N-terminal domain M4S28_23225 IPR016185 Pre-ATP-grasp domain superfamily M4S28_23225 IPR005905 D-alanine--D-alanine ligase M4S28_23225 IPR011761 ATP-grasp fold M4S28_23230 IPR007730 Sporulation-like domain M4S28_23230 IPR036680 Sporulation-like domain superfamily M4S28_23230 IPR032899 Cell division protein DamX M4S28_23235 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain M4S28_23235 IPR013815 ATP-grasp fold, subdomain 1 M4S28_23235 IPR003781 CoA-binding M4S28_23235 IPR000182 GNAT domain M4S28_23235 IPR016181 Acyl-CoA N-acyltransferase M4S28_23235 IPR016102 Succinyl-CoA synthetase-like M4S28_23235 IPR036291 NAD(P)-binding domain superfamily M4S28_23235 IPR011761 ATP-grasp fold M4S28_23240 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23240 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23240 IPR000847 Transcription regulator HTH, LysR M4S28_23240 IPR005119 LysR, substrate-binding M4S28_23245 IPR039426 Vitamin B12 transporter BtuB-like M4S28_23245 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor M4S28_23245 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_23245 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_23245 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_23245 IPR012910 TonB-dependent receptor, plug domain M4S28_23250 IPR016040 NAD(P)-binding domain M4S28_23250 IPR036291 NAD(P)-binding domain superfamily M4S28_23250 IPR005886 UDP-glucose 4-epimerase M4S28_23255 IPR005330 MHYT domain M4S28_23255 IPR029787 Nucleotide cyclase M4S28_23255 IPR035919 EAL domain superfamily M4S28_23255 IPR000160 GGDEF domain M4S28_23255 IPR001633 EAL domain M4S28_23265 IPR010101 TonB-dependent vitamin B12 transporter BtuB M4S28_23265 IPR012910 TonB-dependent receptor, plug domain M4S28_23265 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_23265 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_23265 IPR010916 TonB box, conserved site M4S28_23265 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_23265 IPR010917 TonB-dependent receptor, conserved site M4S28_23265 IPR039426 Vitamin B12 transporter BtuB-like M4S28_23270 IPR005501 LamB/YcsF/PxpA-like M4S28_23270 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel M4S28_23275 IPR029000 Cyclophilin-like domain superfamily M4S28_23275 IPR003833 Carboxyltransferase domain, subdomain C and D M4S28_23275 IPR010016 KipI family M4S28_23280 IPR029000 Cyclophilin-like domain superfamily M4S28_23280 IPR003778 Carboxyltransferase domain, subdomain A and B M4S28_23290 IPR038766 Membrane component of ABC transporter, predicted M4S28_23295 IPR003439 ABC transporter-like M4S28_23295 IPR017871 ABC transporter, conserved site M4S28_23295 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23295 IPR003593 AAA+ ATPase domain M4S28_23300 IPR013830 SGNH hydrolase-type esterase domain M4S28_23300 IPR008265 Lipase, GDSL, active site M4S28_23300 IPR036514 SGNH hydrolase superfamily M4S28_23305 IPR010758 Trans-2-enoyl-CoA reductase M4S28_23305 IPR036291 NAD(P)-binding domain superfamily M4S28_23305 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative M4S28_23305 IPR024906 Enoyl reductase FAD binding domain M4S28_23310 IPR000253 Forkhead-associated (FHA) domain M4S28_23310 IPR029787 Nucleotide cyclase M4S28_23310 IPR000160 GGDEF domain M4S28_23310 IPR008984 SMAD/FHA domain superfamily M4S28_23310 IPR001633 EAL domain M4S28_23310 IPR035919 EAL domain superfamily M4S28_23320 IPR012338 Beta-lactamase/transpeptidase-like M4S28_23320 IPR005311 Penicillin-binding protein, dimerisation domain M4S28_23320 IPR036138 Penicillin-binding protein, dimerisation domain superfamily M4S28_23320 IPR001460 Penicillin-binding protein, transpeptidase M4S28_23320 IPR017790 Penicillin-binding protein 2 M4S28_23325 IPR001305 Heat shock protein DnaJ, cysteine-rich domain M4S28_23325 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M4S28_23325 IPR008971 HSP40/DnaJ peptide-binding M4S28_23325 IPR036869 Chaperone J-domain superfamily M4S28_23325 IPR018253 DnaJ domain, conserved site M4S28_23325 IPR012724 Chaperone DnaJ M4S28_23325 IPR002939 Chaperone DnaJ, C-terminal M4S28_23325 IPR001623 DnaJ domain M4S28_23345 IPR000620 EamA domain M4S28_23350 IPR039424 Solute-binding protein family 5 M4S28_23350 IPR000914 Solute-binding protein family 5 domain M4S28_23350 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M4S28_23350 IPR023767 Transcriptional regulator SgrR M4S28_23360 IPR029069 HotDog domain superfamily M4S28_23360 IPR003736 Phenylacetic acid degradation-related domain M4S28_23360 IPR006683 Thioesterase domain M4S28_23365 IPR001915 Peptidase M48 M4S28_23365 IPR022919 Peptidase M48, protease HtpX, putative M4S28_23375 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M4S28_23375 IPR042117 OMPP1/FadL/TodX superfamily M4S28_23380 IPR020009 Extracellular lipase, Pla-1/cef family M4S28_23380 IPR029058 Alpha/Beta hydrolase fold M4S28_23380 IPR025920 Bacterial virulence factor lipase, N-terminal domain M4S28_23390 IPR005119 LysR, substrate-binding M4S28_23390 IPR000847 Transcription regulator HTH, LysR M4S28_23390 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23390 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23400 IPR006143 RND efflux pump, membrane fusion protein M4S28_23400 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_23400 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA M4S28_23410 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_23410 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_23410 IPR028622 ATP-dependent RNA helicase RhlE M4S28_23410 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_23410 IPR001650 Helicase, C-terminal M4S28_23410 IPR011545 DEAD/DEAH box helicase domain M4S28_23410 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23425 IPR005496 Integral membrane protein TerC M4S28_23425 IPR022369 Integral membrane protein TerC, riboswitch-linked M4S28_23430 IPR029052 Metallo-dependent phosphatase-like M4S28_23430 IPR006179 5'-Nucleotidase/apyrase M4S28_23430 IPR006146 5'-Nucleotidase, conserved site M4S28_23430 IPR036907 5'-Nucleotidase, C-terminal domain superfamily M4S28_23430 IPR008334 5'-Nucleotidase, C-terminal M4S28_23430 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN M4S28_23430 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type M4S28_23435 IPR022602 Protein of unknown function DUF2813 M4S28_23435 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23435 IPR006171 TOPRIM domain M4S28_23435 IPR034139 OLD protein-like, TOPRIM domain M4S28_23440 IPR009476 Protein of unknown function DUF1097 M4S28_23445 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23445 IPR005119 LysR, substrate-binding M4S28_23445 IPR000847 Transcription regulator HTH, LysR M4S28_23445 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23450 IPR000292 Formate/nitrite transporter M4S28_23450 IPR023271 Aquaporin-like M4S28_23450 IPR024002 Formate/nitrite transporter, conserved site M4S28_23450 IPR023999 Formate transporter FocA, putative M4S28_23455 IPR023480 Uncharacterised protein family UPF0312/YceI M4S28_23455 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M4S28_23455 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M4S28_23460 IPR016174 Di-haem cytochrome, transmembrane M4S28_23460 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase M4S28_23475 IPR035919 EAL domain superfamily M4S28_23475 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M4S28_23475 IPR001633 EAL domain M4S28_23480 IPR001036 Acriflavin resistance protein M4S28_23480 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_23485 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB M4S28_23485 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_23485 IPR006143 RND efflux pump, membrane fusion protein M4S28_23490 IPR006143 RND efflux pump, membrane fusion protein M4S28_23490 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_23490 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB M4S28_23500 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23500 IPR001650 Helicase, C-terminal M4S28_23500 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_23500 IPR028622 ATP-dependent RNA helicase RhlE M4S28_23500 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_23500 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_23500 IPR011545 DEAD/DEAH box helicase domain M4S28_23505 IPR007431 Acyl carrier protein phosphodiesterase M4S28_23505 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria M4S28_23510 IPR018227 Amino acid/polyamine transporter 2 M4S28_23510 IPR013061 Tryptophan/tryrosine permease, conserved site M4S28_23510 IPR013059 Tryptophan/tyrosine transporter M4S28_23515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_23515 IPR029151 Periplasmic sensor-like domain superfamily M4S28_23520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_23520 IPR036412 HAD-like superfamily M4S28_23520 IPR006439 HAD hydrolase, subfamily IA M4S28_23520 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_23520 IPR023214 HAD superfamily M4S28_23525 IPR037522 HD-GYP domain M4S28_23525 IPR001789 Signal transduction response regulator, receiver domain M4S28_23525 IPR003607 HD/PDEase domain M4S28_23525 IPR021800 Domain of unknown function DUF3369 M4S28_23525 IPR011006 CheY-like superfamily M4S28_23570 IPR011611 Carbohydrate kinase PfkB M4S28_23570 IPR029056 Ribokinase-like M4S28_23570 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_23575 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site M4S28_23575 IPR000559 Formate-tetrahydrofolate ligase, FTHFS M4S28_23575 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23580 IPR029787 Nucleotide cyclase M4S28_23580 IPR033424 Membrane-associated sensor domain M4S28_23580 IPR000160 GGDEF domain M4S28_23585 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_23585 IPR023214 HAD superfamily M4S28_23585 IPR006439 HAD hydrolase, subfamily IA M4S28_23585 IPR036412 HAD-like superfamily M4S28_23585 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_23585 IPR010976 Beta-phosphoglucomutase hydrolase M4S28_23590 IPR000352 Peptide chain release factor class I M4S28_23605 IPR033116 Serine proteases, trypsin family, serine active site M4S28_23605 IPR009003 Peptidase S1, PA clan M4S28_23605 IPR001314 Peptidase S1A, chymotrypsin family M4S28_23605 IPR001254 Serine proteases, trypsin domain M4S28_23605 IPR018114 Serine proteases, trypsin family, histidine active site M4S28_23610 IPR028896 Aminomethyltransferase-like M4S28_23610 IPR006222 Aminomethyltransferase, folate-binding domain M4S28_23610 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M4S28_23610 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 M4S28_23610 IPR022903 Glycine cleavage system T protein, bacteria M4S28_23610 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain M4S28_23610 IPR006223 Glycine cleavage system T protein M4S28_23620 IPR001085 Serine hydroxymethyltransferase M4S28_23620 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_23620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_23620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_23620 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site M4S28_23620 IPR039429 Serine hydroxymethyltransferase-like domain M4S28_23625 IPR011053 Single hybrid motif M4S28_23625 IPR017453 Glycine cleavage system H-protein, subgroup M4S28_23625 IPR033753 Glycine cleavage system H-protein/Simiate M4S28_23625 IPR002930 Glycine cleavage system H-protein M4S28_23625 IPR000089 Biotin/lipoyl attachment M4S28_23630 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_23630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_23630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_23630 IPR003437 Glycine dehydrogenase (decarboxylating) M4S28_23630 IPR020581 Glycine cleavage system P protein M4S28_23650 IPR002528 Multi antimicrobial extrusion protein M4S28_23660 IPR000727 Target SNARE coiled-coil homology domain M4S28_23660 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_23660 IPR029151 Periplasmic sensor-like domain superfamily M4S28_23660 IPR003660 HAMP domain M4S28_23660 IPR033479 Double Cache domain 1 M4S28_23660 IPR004090 Chemotaxis methyl-accepting receptor M4S28_23670 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23670 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23670 IPR000847 Transcription regulator HTH, LysR M4S28_23670 IPR005119 LysR, substrate-binding M4S28_23675 IPR001123 Amino acid exporter protein, LeuE-type M4S28_23690 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_23690 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_23690 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_23700 IPR002306 Tryptophan-tRNA ligase M4S28_23700 IPR024109 Tryptophan-tRNA ligase, bacterial-type M4S28_23700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_23700 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_23700 IPR002305 Aminoacyl-tRNA synthetase, class Ic M4S28_23710 IPR011780 D-serine ammonia-lyase M4S28_23710 IPR001926 Pyridoxal-phosphate dependent enzyme M4S28_23710 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site M4S28_23710 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M4S28_23715 IPR004747 Cyanate transport system protein M4S28_23715 IPR011701 Major facilitator superfamily M4S28_23715 IPR020846 Major facilitator superfamily domain M4S28_23715 IPR036259 MFS transporter superfamily M4S28_23725 IPR036610 PEBP-like superfamily M4S28_23725 IPR008914 Phosphatidylethanolamine-binding protein M4S28_23725 IPR005247 YbhB/YbcL M4S28_23730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_23730 IPR029151 Periplasmic sensor-like domain superfamily M4S28_23730 IPR013767 PAS fold M4S28_23730 IPR000700 PAS-associated, C-terminal M4S28_23730 IPR000014 PAS domain M4S28_23730 IPR003660 HAMP domain M4S28_23730 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_23730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_23730 IPR005467 Histidine kinase domain M4S28_23730 IPR035965 PAS domain superfamily M4S28_23730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_23730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_23735 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23735 IPR001789 Signal transduction response regulator, receiver domain M4S28_23735 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB M4S28_23735 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_23735 IPR011006 CheY-like superfamily M4S28_23735 IPR039420 Transcriptional regulatory protein WalR-like M4S28_23750 IPR000847 Transcription regulator HTH, LysR M4S28_23750 IPR005119 LysR, substrate-binding M4S28_23750 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23750 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23755 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_23760 IPR011701 Major facilitator superfamily M4S28_23760 IPR020846 Major facilitator superfamily domain M4S28_23760 IPR004638 Drug resistance transporter EmrB-like M4S28_23760 IPR036259 MFS transporter superfamily M4S28_23775 IPR007630 RNA polymerase sigma-70 region 4 M4S28_23775 IPR014284 RNA polymerase sigma-70 like domain M4S28_23775 IPR000943 RNA polymerase sigma-70 M4S28_23775 IPR009042 RNA polymerase sigma-70 region 1.2 M4S28_23775 IPR007627 RNA polymerase sigma-70 region 2 M4S28_23775 IPR007624 RNA polymerase sigma-70 region 3 M4S28_23775 IPR013325 RNA polymerase sigma factor, region 2 M4S28_23775 IPR013324 RNA polymerase sigma factor, region 3/4-like M4S28_23775 IPR012761 RNA polymerase sigma factor RpoS M4S28_23775 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23795 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M4S28_23795 IPR006144 Secretion protein HlyD, conserved site M4S28_23795 IPR010129 Type I secretion membrane fusion protein, HlyD family M4S28_23800 IPR001789 Signal transduction response regulator, receiver domain M4S28_23800 IPR011006 CheY-like superfamily M4S28_23800 IPR005467 Histidine kinase domain M4S28_23800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_23800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_23800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_23800 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_23800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_23805 IPR010130 Type I secretion outer membrane protein, TolC M4S28_23805 IPR003423 Outer membrane efflux protein M4S28_23810 IPR011527 ABC transporter type 1, transmembrane domain M4S28_23810 IPR039421 Type I protein exporter M4S28_23810 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23810 IPR011917 ABC transporter, lipid A export, MsbA M4S28_23810 IPR017871 ABC transporter, conserved site M4S28_23810 IPR003439 ABC transporter-like M4S28_23810 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_23810 IPR003593 AAA+ ATPase domain M4S28_23815 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23815 IPR017871 ABC transporter, conserved site M4S28_23815 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_23815 IPR011527 ABC transporter type 1, transmembrane domain M4S28_23815 IPR003593 AAA+ ATPase domain M4S28_23815 IPR003439 ABC transporter-like M4S28_23825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_23825 IPR005467 Histidine kinase domain M4S28_23825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_23825 IPR003660 HAMP domain M4S28_23825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_23825 IPR019247 Histidine kinase BarA, N-terminal M4S28_23825 IPR036641 HPT domain superfamily M4S28_23825 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_23825 IPR001789 Signal transduction response regulator, receiver domain M4S28_23825 IPR011006 CheY-like superfamily M4S28_23825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_23825 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_23840 IPR000101 Gamma-glutamyltranspeptidase M4S28_23840 IPR029055 Nucleophile aminohydrolases, N-terminal M4S28_23850 IPR013785 Aldolase-type TIM barrel M4S28_23850 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M4S28_23850 IPR007197 Radical SAM M4S28_23850 IPR023885 4Fe4S-binding SPASM domain M4S28_23855 IPR042095 Sulfatase-modifying factor enzyme superfamily M4S28_23855 IPR005532 Sulfatase-modifying factor enzyme M4S28_23855 IPR016187 C-type lectin fold M4S28_23865 IPR028082 Periplasmic binding protein-like I M4S28_23865 IPR025997 Periplasmic binding protein M4S28_23875 IPR035965 PAS domain superfamily M4S28_23875 IPR001633 EAL domain M4S28_23875 IPR035919 EAL domain superfamily M4S28_23875 IPR000160 GGDEF domain M4S28_23875 IPR005330 MHYT domain M4S28_23875 IPR029787 Nucleotide cyclase M4S28_23880 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_23880 IPR005119 LysR, substrate-binding M4S28_23880 IPR000847 Transcription regulator HTH, LysR M4S28_23880 IPR036390 Winged helix DNA-binding domain superfamily M4S28_23895 IPR036465 von Willebrand factor A-like domain superfamily M4S28_23895 IPR022933 Uncharacterised protein family UPF0353 M4S28_23895 IPR002035 von Willebrand factor, type A M4S28_23910 IPR041628 ChlI/MoxR, AAA lid domain M4S28_23910 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_23910 IPR011703 ATPase, AAA-3 M4S28_23920 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_23920 IPR024607 Sulfatase, conserved site M4S28_23920 IPR000917 Sulfatase, N-terminal M4S28_23925 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_23925 IPR024607 Sulfatase, conserved site M4S28_23925 IPR000917 Sulfatase, N-terminal M4S28_23930 IPR036909 Cytochrome c-like domain superfamily M4S28_23930 IPR009056 Cytochrome c-like domain M4S28_23930 IPR004852 Di-haem cytochrome c peroxidase M4S28_23930 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase M4S28_23935 IPR035965 PAS domain superfamily M4S28_23935 IPR015387 LuxQ, periplasmic M4S28_23935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_23935 IPR001789 Signal transduction response regulator, receiver domain M4S28_23935 IPR011006 CheY-like superfamily M4S28_23935 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_23935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_23935 IPR005467 Histidine kinase domain M4S28_23935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_23935 IPR029151 Periplasmic sensor-like domain superfamily M4S28_23935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_23945 IPR018635 Uncharacterised protein family UPF0319 M4S28_23960 IPR006330 Adenosine/adenine deaminase M4S28_23960 IPR001365 Adenosine/AMP deaminase domain M4S28_23960 IPR028892 Adenine deaminase type 2 M4S28_23960 IPR032466 Metal-dependent hydrolase M4S28_23965 IPR000792 Transcription regulator LuxR, C-terminal M4S28_23965 IPR001789 Signal transduction response regulator, receiver domain M4S28_23965 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_23965 IPR011006 CheY-like superfamily M4S28_23980 IPR000782 FAS1 domain M4S28_23980 IPR036378 FAS1 domain superfamily M4S28_24010 IPR003719 Phenazine biosynthesis PhzF protein M4S28_24015 IPR001123 Amino acid exporter protein, LeuE-type M4S28_24015 IPR004778 Homoserine/Threonine efflux protein M4S28_24025 IPR001633 EAL domain M4S28_24025 IPR005330 MHYT domain M4S28_24025 IPR035965 PAS domain superfamily M4S28_24025 IPR029787 Nucleotide cyclase M4S28_24025 IPR000160 GGDEF domain M4S28_24025 IPR035919 EAL domain superfamily M4S28_24045 IPR036927 Cytochrome c oxidase-like, subunit I superfamily M4S28_24045 IPR000883 Cytochrome c oxidase subunit I M4S28_24045 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site M4S28_24045 IPR004677 Cytochrome c oxidase cbb3-type, subunit I M4S28_24045 IPR023616 Cytochrome c oxidase-like, subunit I domain M4S28_24055 IPR009056 Cytochrome c-like domain M4S28_24055 IPR036909 Cytochrome c-like domain superfamily M4S28_24055 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit M4S28_24055 IPR008168 Cytochrome c, class IC M4S28_24070 IPR002410 Peptidase S33 M4S28_24070 IPR000073 Alpha/beta hydrolase fold-1 M4S28_24070 IPR029058 Alpha/Beta hydrolase fold M4S28_24085 IPR000060 BCCT transporter family M4S28_24095 IPR016160 Aldehyde dehydrogenase, cysteine active site M4S28_24095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site M4S28_24095 IPR016162 Aldehyde dehydrogenase, N-terminal M4S28_24095 IPR016163 Aldehyde dehydrogenase, C-terminal M4S28_24095 IPR016161 Aldehyde/histidinol dehydrogenase M4S28_24095 IPR015590 Aldehyde dehydrogenase domain M4S28_24105 IPR005119 LysR, substrate-binding M4S28_24105 IPR000847 Transcription regulator HTH, LysR M4S28_24105 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24105 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24105 IPR017685 HTH-type transcriptional regulator ArgP M4S28_24105 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M4S28_24115 IPR035908 ATP synthase, F0 complex, subunit A superfamily M4S28_24115 IPR023011 ATP synthase, F0 complex, subunit A, active site M4S28_24115 IPR000568 ATP synthase, F0 complex, subunit A M4S28_24120 IPR038662 F1F0 ATP synthase subunit C superfamily M4S28_24120 IPR000454 ATP synthase, F0 complex, subunit C M4S28_24120 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast M4S28_24120 IPR035921 F/V-ATP synthase subunit C superfamily M4S28_24120 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site M4S28_24120 IPR002379 V-ATPase proteolipid subunit C-like domain M4S28_24125 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M4S28_24125 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast M4S28_24125 IPR005864 ATP synthase, F0 complex, subunit b, bacterial M4S28_24130 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily M4S28_24130 IPR020781 ATPase, OSCP/delta subunit, conserved site M4S28_24130 IPR000711 ATPase, OSCP/delta subunit M4S28_24135 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M4S28_24135 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M4S28_24135 IPR005294 ATP synthase, F1 complex, alpha subunit M4S28_24135 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain M4S28_24135 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily M4S28_24135 IPR000793 ATP synthase, alpha subunit, C-terminal M4S28_24135 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily M4S28_24135 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_24135 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24135 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M4S28_24140 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site M4S28_24140 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily M4S28_24140 IPR000131 ATP synthase, F1 complex, gamma subunit M4S28_24145 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal M4S28_24145 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site M4S28_24145 IPR005722 ATP synthase, F1 complex, beta subunit M4S28_24145 IPR003593 AAA+ ATPase domain M4S28_24145 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24145 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain M4S28_24145 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain M4S28_24145 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily M4S28_24150 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal M4S28_24150 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily M4S28_24150 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal M4S28_24150 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit M4S28_24150 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M4S28_24160 IPR000847 Transcription regulator HTH, LysR M4S28_24160 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24160 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24160 IPR005119 LysR, substrate-binding M4S28_24170 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24170 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal M4S28_24170 IPR017871 ABC transporter, conserved site M4S28_24170 IPR003439 ABC transporter-like M4S28_24170 IPR003593 AAA+ ATPase domain M4S28_24175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_24175 IPR035906 MetI-like superfamily M4S28_24175 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M4S28_24180 IPR035906 MetI-like superfamily M4S28_24180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_24185 IPR030678 Peptide/nickel binding protein, MppA-type M4S28_24185 IPR039424 Solute-binding protein family 5 M4S28_24185 IPR000914 Solute-binding protein family 5 domain M4S28_24205 IPR023064 D-ribose pyranase M4S28_24205 IPR023750 RbsD-like superfamily M4S28_24205 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU M4S28_24210 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24210 IPR015861 ABC transporter, ribose import, RbsA M4S28_24210 IPR017871 ABC transporter, conserved site M4S28_24210 IPR003593 AAA+ ATPase domain M4S28_24210 IPR003439 ABC transporter-like M4S28_24215 IPR001851 ABC transporter, permease M4S28_24220 IPR028082 Periplasmic binding protein-like I M4S28_24220 IPR025997 Periplasmic binding protein M4S28_24225 IPR011611 Carbohydrate kinase PfkB M4S28_24225 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_24225 IPR029056 Ribokinase-like M4S28_24225 IPR002139 Ribokinase/fructokinase M4S28_24225 IPR011877 Ribokinase M4S28_24230 IPR028082 Periplasmic binding protein-like I M4S28_24230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_24230 IPR000843 LacI-type HTH domain M4S28_24235 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_24235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_24235 IPR001789 Signal transduction response regulator, receiver domain M4S28_24235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_24235 IPR011006 CheY-like superfamily M4S28_24235 IPR015387 LuxQ, periplasmic M4S28_24235 IPR029151 Periplasmic sensor-like domain superfamily M4S28_24235 IPR005467 Histidine kinase domain M4S28_24235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_24235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_24240 IPR036526 Carbon-nitrogen hydrolase superfamily M4S28_24240 IPR001110 Uncharacterised protein family UPF0012, conserved site M4S28_24240 IPR003010 Carbon-nitrogen hydrolase M4S28_24260 IPR013491 Caudovirus, tape measure, N-terminal M4S28_24305 IPR003593 AAA+ ATPase domain M4S28_24305 IPR003439 ABC transporter-like M4S28_24305 IPR017871 ABC transporter, conserved site M4S28_24305 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24345 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24345 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24345 IPR000847 Transcription regulator HTH, LysR M4S28_24345 IPR005119 LysR, substrate-binding M4S28_24380 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M4S28_24380 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M4S28_24415 IPR007069 Transposase, IS801/IS1294 M4S28_24415 IPR026889 Transposase zinc-binding domain M4S28_24420 IPR011946 Integrase, integron-type M4S28_24420 IPR010998 Integrase/recombinase, N-terminal M4S28_24420 IPR002104 Integrase, catalytic domain M4S28_24420 IPR013762 Integrase-like, catalytic domain superfamily M4S28_24420 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_24420 IPR004107 Integrase, SAM-like, N-terminal M4S28_24425 IPR026889 Transposase zinc-binding domain M4S28_24425 IPR007069 Transposase, IS801/IS1294 M4S28_24430 IPR004107 Integrase, SAM-like, N-terminal M4S28_24430 IPR010998 Integrase/recombinase, N-terminal M4S28_24430 IPR011946 Integrase, integron-type M4S28_24430 IPR011010 DNA breaking-rejoining enzyme, catalytic core M4S28_24430 IPR013762 Integrase-like, catalytic domain superfamily M4S28_24430 IPR002104 Integrase, catalytic domain M4S28_24440 IPR009010 Aspartate decarboxylase-like domain superfamily M4S28_24440 IPR006657 Molybdopterin dinucleotide-binding domain M4S28_24440 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site M4S28_24440 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain M4S28_24440 IPR006656 Molybdopterin oxidoreductase M4S28_24445 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal M4S28_24445 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site M4S28_24445 IPR017121 Nitrite reductase [NAD(P)H], large subunit M4S28_24445 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain M4S28_24445 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain M4S28_24445 IPR023753 FAD/NAD(P)-binding domain M4S28_24445 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_24445 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily M4S28_24445 IPR007419 BFD-like [2Fe-2S]-binding domain M4S28_24445 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB M4S28_24445 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily M4S28_24455 IPR011701 Major facilitator superfamily M4S28_24455 IPR020846 Major facilitator superfamily domain M4S28_24455 IPR036259 MFS transporter superfamily M4S28_24455 IPR004737 Nitrate transporter M4S28_24460 IPR000719 Protein kinase domain M4S28_24460 IPR008271 Serine/threonine-protein kinase, active site M4S28_24460 IPR011009 Protein kinase-like domain superfamily M4S28_24460 IPR005543 PASTA domain M4S28_24460 IPR017441 Protein kinase, ATP binding site M4S28_24465 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_24465 IPR000843 LacI-type HTH domain M4S28_24465 IPR012781 D-fructose-responsive transcription factor M4S28_24465 IPR001761 Periplasmic binding protein/LacI sugar binding domain M4S28_24465 IPR028082 Periplasmic binding protein-like I M4S28_24470 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M4S28_24470 IPR000032 Phosphocarrier protein HPr-like M4S28_24470 IPR035895 HPr-like superfamily M4S28_24470 IPR002178 PTS EIIA type-2 domain M4S28_24470 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M4S28_24470 IPR016152 Phosphotransferase/anion transporter M4S28_24475 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site M4S28_24475 IPR017583 Tagatose/fructose phosphokinase M4S28_24475 IPR029056 Ribokinase-like M4S28_24475 IPR022463 Fructose 1-phosphate kinase M4S28_24475 IPR011611 Carbohydrate kinase PfkB M4S28_24480 IPR006327 Phosphotransferase system, fructose IIC component M4S28_24480 IPR003353 Phosphotransferase system, fructose-specific IIB subunit M4S28_24480 IPR013014 Phosphotransferase system, EIIC component, type 2 M4S28_24480 IPR003352 Phosphotransferase system, EIIC M4S28_24480 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_24480 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_24480 IPR036095 PTS system IIB component-like superfamily M4S28_24490 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_24490 IPR022831 Multidrug resistance protein MdtB M4S28_24490 IPR001036 Acriflavin resistance protein M4S28_24510 IPR006694 Fatty acid hydroxylase M4S28_24515 IPR011006 CheY-like superfamily M4S28_24515 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_24515 IPR001789 Signal transduction response regulator, receiver domain M4S28_24515 IPR039420 Transcriptional regulatory protein WalR-like M4S28_24515 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24535 IPR010987 Glutathione S-transferase, C-terminal-like M4S28_24535 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M4S28_24535 IPR040079 Glutathione Transferase family M4S28_24535 IPR004045 Glutathione S-transferase, N-terminal M4S28_24535 IPR036249 Thioredoxin-like superfamily M4S28_24540 IPR003615 HNH nuclease M4S28_24540 IPR002711 HNH endonuclease M4S28_24550 IPR011701 Major facilitator superfamily M4S28_24550 IPR020846 Major facilitator superfamily domain M4S28_24550 IPR036259 MFS transporter superfamily M4S28_24550 IPR004741 Oxalate/formate antiporter family transporter M4S28_24555 IPR033315 Fanconi-associated nuclease 1-like M4S28_24555 IPR040603 Fanconi-associated nuclease 1, SAP domain M4S28_24555 IPR011856 tRNA endonuclease-like domain superfamily M4S28_24555 IPR014883 VRR-NUC domain M4S28_24565 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_24565 IPR001789 Signal transduction response regulator, receiver domain M4S28_24565 IPR005467 Histidine kinase domain M4S28_24565 IPR036641 HPT domain superfamily M4S28_24565 IPR033414 Periplasmic sensor domain M4S28_24565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_24565 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_24565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_24565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_24565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_24565 IPR011006 CheY-like superfamily M4S28_24565 IPR003660 HAMP domain M4S28_24575 IPR001761 Periplasmic binding protein/LacI sugar binding domain M4S28_24575 IPR014301 TMAO reductase system, periplasmic protein TorT M4S28_24575 IPR028082 Periplasmic binding protein-like I M4S28_24580 IPR004363 Methylglyoxal synthase M4S28_24580 IPR018148 Methylglyoxal synthase, active site M4S28_24580 IPR011607 Methylglyoxal synthase-like domain M4S28_24580 IPR036914 Methylglyoxal synthase-like domain superfamily M4S28_24590 IPR014017 UvrD-like DNA helicase, C-terminal M4S28_24590 IPR000212 DNA helicase, UvrD/REP type M4S28_24590 IPR022161 DNA helicase IV, N-terminal domain M4S28_24590 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24590 IPR014016 UvrD-like helicase, ATP-binding domain M4S28_24590 IPR034739 UvrD/AddA helicase, N-terminal M4S28_24595 IPR010019 Integral membrane protein, YccS M4S28_24595 IPR010020 Integral membrane protein, YccS/YhfK M4S28_24595 IPR032692 Integral membrane protein YccS, N-terminal M4S28_24615 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24615 IPR005119 LysR, substrate-binding M4S28_24615 IPR000847 Transcription regulator HTH, LysR M4S28_24615 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24620 IPR013785 Aldolase-type TIM barrel M4S28_24620 IPR034457 Organic radical-activating enzymes M4S28_24620 IPR012839 Organic radical enzyme activase M4S28_24620 IPR001989 Radical-activating enzyme, conserved site M4S28_24620 IPR007197 Radical SAM M4S28_24620 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M4S28_24620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M4S28_24620 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW M4S28_24625 IPR016905 Glycyl radical enzyme, HI0521, predicted M4S28_24630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M4S28_24630 IPR010233 Ubiquinone biosynthesis O-methyltransferase M4S28_24635 IPR005119 LysR, substrate-binding M4S28_24635 IPR000847 Transcription regulator HTH, LysR M4S28_24635 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24635 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24650 IPR000620 EamA domain M4S28_24655 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB M4S28_24655 IPR036412 HAD-like superfamily M4S28_24655 IPR006439 HAD hydrolase, subfamily IA M4S28_24655 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_24655 IPR023214 HAD superfamily M4S28_24655 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_24665 IPR039697 Iron-type alcohol dehydrogenase-like M4S28_24665 IPR018211 Alcohol dehydrogenase, iron-type, conserved site M4S28_24665 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA M4S28_24685 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG M4S28_24685 IPR003680 Flavodoxin-like fold M4S28_24685 IPR029039 Flavoprotein-like superfamily M4S28_24690 IPR038770 Sodium/solute symporter superfamily M4S28_24690 IPR006153 Cation/H+ exchanger M4S28_24690 IPR004771 K+/H+ exchanger M4S28_24690 IPR023941 Glutathione-regulated potassium-efflux system protein KefC M4S28_24690 IPR006036 Potassium uptake protein TrkA M4S28_24690 IPR036291 NAD(P)-binding domain superfamily M4S28_24690 IPR003148 Regulator of K+ conductance, N-terminal M4S28_24720 IPR004627 L-threonine 3-dehydrogenase M4S28_24720 IPR011032 GroES-like superfamily M4S28_24720 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site M4S28_24720 IPR013154 Alcohol dehydrogenase, N-terminal M4S28_24720 IPR013149 Alcohol dehydrogenase, C-terminal M4S28_24720 IPR020843 Polyketide synthase, enoylreductase domain M4S28_24720 IPR036291 NAD(P)-binding domain superfamily M4S28_24725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_24725 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_24725 IPR004839 Aminotransferase, class I/classII M4S28_24725 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase M4S28_24725 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site M4S28_24725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_24730 IPR033418 Periplasmic sensor domain, extracellular M4S28_24730 IPR001633 EAL domain M4S28_24730 IPR035919 EAL domain superfamily M4S28_24740 IPR003593 AAA+ ATPase domain M4S28_24740 IPR003838 ABC transporter permease protein domain M4S28_24740 IPR003439 ABC transporter-like M4S28_24740 IPR017871 ABC transporter, conserved site M4S28_24740 IPR017911 ABC transporter, macrolide export, ATP-binding domain M4S28_24740 IPR025857 MacB-like periplasmic core domain M4S28_24740 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24745 IPR017911 ABC transporter, macrolide export, ATP-binding domain M4S28_24745 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24745 IPR025857 MacB-like periplasmic core domain M4S28_24745 IPR017871 ABC transporter, conserved site M4S28_24745 IPR003439 ABC transporter-like M4S28_24745 IPR003838 ABC transporter permease protein domain M4S28_24745 IPR003593 AAA+ ATPase domain M4S28_24750 IPR003593 AAA+ ATPase domain M4S28_24750 IPR003838 ABC transporter permease protein domain M4S28_24750 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24750 IPR003439 ABC transporter-like M4S28_24750 IPR025857 MacB-like periplasmic core domain M4S28_24750 IPR017911 ABC transporter, macrolide export, ATP-binding domain M4S28_24750 IPR017871 ABC transporter, conserved site M4S28_24760 IPR006143 RND efflux pump, membrane fusion protein M4S28_24760 IPR030190 Macrolide export protein MacA M4S28_24760 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M4S28_24770 IPR005119 LysR, substrate-binding M4S28_24770 IPR000847 Transcription regulator HTH, LysR M4S28_24770 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24770 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24775 IPR037523 Vicinal oxygen chelate (VOC) domain M4S28_24775 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M4S28_24775 IPR037478 YwkD-like domain M4S28_24775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M4S28_24795 IPR003141 Polymerase/histidinol phosphatase, N-terminal M4S28_24795 IPR016195 Polymerase/histidinol phosphatase-like M4S28_24795 IPR023710 Probable phosphatase YcdX M4S28_24800 IPR013515 Phytochrome, central region M4S28_24800 IPR001294 Phytochrome M4S28_24800 IPR035919 EAL domain superfamily M4S28_24800 IPR029787 Nucleotide cyclase M4S28_24800 IPR000160 GGDEF domain M4S28_24800 IPR029016 GAF-like domain superfamily M4S28_24800 IPR003018 GAF domain M4S28_24800 IPR001633 EAL domain M4S28_24800 IPR016132 Phytochrome chromophore attachment domain M4S28_24805 IPR003607 HD/PDEase domain M4S28_24805 IPR006675 HDIG domain M4S28_24805 IPR037522 HD-GYP domain M4S28_24805 IPR006674 HD domain M4S28_24815 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24815 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24815 IPR000847 Transcription regulator HTH, LysR M4S28_24815 IPR005119 LysR, substrate-binding M4S28_24820 IPR002765 Uncharacterised protein family UPF0145 M4S28_24820 IPR035439 UPF0145 domain superfamily M4S28_24825 IPR016047 Peptidase M23 M4S28_24825 IPR018392 LysM domain M4S28_24825 IPR013731 Opacity-associated protein A, N-terminal M4S28_24825 IPR011055 Duplicated hybrid motif M4S28_24850 IPR039421 Type I protein exporter M4S28_24850 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24850 IPR017871 ABC transporter, conserved site M4S28_24850 IPR003439 ABC transporter-like M4S28_24850 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_24850 IPR011527 ABC transporter type 1, transmembrane domain M4S28_24850 IPR003593 AAA+ ATPase domain M4S28_24855 IPR017871 ABC transporter, conserved site M4S28_24855 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24855 IPR039421 Type I protein exporter M4S28_24855 IPR003593 AAA+ ATPase domain M4S28_24855 IPR003439 ABC transporter-like M4S28_24855 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_24855 IPR011527 ABC transporter type 1, transmembrane domain M4S28_24870 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding M4S28_24870 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding M4S28_24870 IPR023586 Isoleucine-tRNA ligase, type 2 M4S28_24870 IPR002301 Isoleucine-tRNA ligase M4S28_24870 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain M4S28_24870 IPR002300 Aminoacyl-tRNA synthetase, class Ia M4S28_24870 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site M4S28_24870 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain M4S28_24870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M4S28_24890 IPR005130 Serine dehydratase-like, alpha subunit M4S28_24890 IPR029009 Allosteric substrate binding domain superfamily M4S28_24890 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form M4S28_24890 IPR005131 Serine dehydratase beta chain M4S28_24895 IPR000109 Proton-dependent oligopeptide transporter family M4S28_24895 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site M4S28_24895 IPR005279 Dipeptide/tripeptide permease M4S28_24895 IPR020846 Major facilitator superfamily domain M4S28_24895 IPR036259 MFS transporter superfamily M4S28_24900 IPR017938 Riboflavin synthase-like beta-barrel M4S28_24900 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_24900 IPR013113 FAD-binding 9, siderophore-interacting M4S28_24900 IPR039374 Siderophore-interacting protein M4S28_24900 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_24900 IPR007037 Siderophore-interacting protein, C-terminal domain M4S28_24905 IPR000843 LacI-type HTH domain M4S28_24905 IPR010982 Lambda repressor-like, DNA-binding domain superfamily M4S28_24905 IPR001761 Periplasmic binding protein/LacI sugar binding domain M4S28_24905 IPR028082 Periplasmic binding protein-like I M4S28_24910 IPR006183 6-phosphogluconate dehydrogenase M4S28_24910 IPR036291 NAD(P)-binding domain superfamily M4S28_24910 IPR006184 6-phosphogluconate-binding site M4S28_24910 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding M4S28_24910 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating M4S28_24910 IPR006114 6-phosphogluconate dehydrogenase, C-terminal M4S28_24910 IPR013328 6-phosphogluconate dehydrogenase, domain 2 M4S28_24910 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily M4S28_24915 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24915 IPR006001 Carbohydrate kinase, thermoresistant glucokinase M4S28_24915 IPR031322 Shikimate kinase/gluconokinase M4S28_24920 IPR004681 TRAP transporter large membrane protein DctM M4S28_24920 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M4S28_24930 IPR041721 Lactate-binding periplasmic protein TTHA0766 M4S28_24930 IPR038404 TRAP transporter solute receptor DctP superfamily M4S28_24930 IPR018389 TRAP transporter solute receptor DctP/TeaA M4S28_24930 IPR006311 Twin-arginine translocation pathway, signal sequence M4S28_24930 IPR026289 Solute binding protein, TakP-like M4S28_24940 IPR000524 Transcription regulator HTH, GntR M4S28_24940 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M4S28_24940 IPR017722 Phosphonate utilization transcriptional regulator PhnR M4S28_24940 IPR011663 UbiC transcription regulator-associated M4S28_24940 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_24940 IPR036390 Winged helix DNA-binding domain superfamily M4S28_24945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like M4S28_24945 IPR035906 MetI-like superfamily M4S28_24950 IPR017871 ABC transporter, conserved site M4S28_24950 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_24950 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 M4S28_24950 IPR008995 Molybdate/tungstate binding, C-terminal M4S28_24950 IPR015853 ABC transporter, ferric cation import, FbpC M4S28_24950 IPR003593 AAA+ ATPase domain M4S28_24950 IPR003439 ABC transporter-like M4S28_24955 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_24955 IPR006076 FAD dependent oxidoreductase M4S28_24960 IPR026045 Ferric binding protein M4S28_24965 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase M4S28_24965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_24965 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_24965 IPR012703 2-aminoethylphosphonate--pyruvate transaminase M4S28_24965 IPR000192 Aminotransferase class V domain M4S28_24965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_24970 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_24970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 M4S28_24970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_24970 IPR005814 Aminotransferase class-III M4S28_24975 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M4S28_24975 IPR036412 HAD-like superfamily M4S28_24975 IPR006439 HAD hydrolase, subfamily IA M4S28_24975 IPR041492 Haloacid dehalogenase-like hydrolase M4S28_24975 IPR023214 HAD superfamily M4S28_24975 IPR006323 Phosphonoacetaldehyde hydrolase M4S28_24980 IPR000498 Outer membrane protein OmpA-like, transmembrane domain M4S28_24980 IPR036737 OmpA-like domain superfamily M4S28_24980 IPR006665 OmpA-like domain M4S28_24980 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_24980 IPR006664 Outer membrane protein, bacterial M4S28_24980 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M4S28_24980 IPR002368 Outer membrane protein, OmpA M4S28_24985 IPR015946 K homology domain-like, alpha/beta M4S28_24985 IPR003718 OsmC/Ohr family M4S28_24985 IPR036102 OsmC/Ohr superfamily M4S28_24990 IPR011057 Mss4-like superfamily M4S28_24990 IPR028427 Peptide methionine sulfoxide reductase M4S28_24990 IPR002569 Peptide methionine sulphoxide reductase MsrA M4S28_24990 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily M4S28_24990 IPR002579 Peptide methionine sulphoxide reductase MrsB M4S28_24995 IPR003445 Cation transporter M4S28_24995 IPR004772 TrkH potassium transport family M4S28_25000 IPR003148 Regulator of K+ conductance, N-terminal M4S28_25000 IPR006037 Regulator of K+ conductance, C-terminal M4S28_25000 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily M4S28_25000 IPR036291 NAD(P)-binding domain superfamily M4S28_25005 IPR006685 Mechanosensitive ion channel MscS M4S28_25005 IPR011066 Mechanosensitive ion channel MscS, C-terminal M4S28_25005 IPR006686 Mechanosensitive ion channel MscS, conserved site M4S28_25005 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 M4S28_25005 IPR023408 Mechanosensitive ion channel MscS domain superfamily M4S28_25005 IPR010920 LSM domain superfamily M4S28_25010 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal M4S28_25010 IPR005835 Nucleotidyl transferase domain M4S28_25010 IPR029044 Nucleotide-diphospho-sugar transferases M4S28_25010 IPR014710 RmlC-like jelly roll fold M4S28_25010 IPR011051 RmlC-like cupin domain superfamily M4S28_25010 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase M4S28_25015 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M4S28_25015 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M4S28_25015 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M4S28_25015 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M4S28_25015 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M4S28_25015 IPR005843 Alpha-D-phosphohexomutase, C-terminal M4S28_25015 IPR016066 Alpha-D-phosphohexomutase, conserved site M4S28_25015 IPR005841 Alpha-D-phosphohexomutase superfamily M4S28_25020 IPR006218 DAHP synthetase I/KDSA M4S28_25020 IPR006219 DHAP synthase, class 1 M4S28_25020 IPR013785 Aldolase-type TIM barrel M4S28_25025 IPR024530 Putative quorum-sensing-regulated virulence factor M4S28_25040 IPR004302 Cellulose/chitin-binding protein, N-terminal M4S28_25040 IPR041029 N-acetylglucosamine binding protein A domain 2 M4S28_25040 IPR014756 Immunoglobulin E-set M4S28_25040 IPR020879 N-acetylglucosamine-binding protein A M4S28_25045 IPR006369 Protohaem IX farnesyltransferase M4S28_25045 IPR000537 UbiA prenyltransferase family M4S28_25045 IPR030470 UbiA prenyltransferase conserved site M4S28_25050 IPR003780 COX15/CtaA family M4S28_25050 IPR023754 Heme A synthase, type 2 M4S28_25070 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle M4S28_25070 IPR024791 Cytochrome c oxidase subunit III M4S28_25070 IPR033945 Cytochrome c oxidase subunit III domain M4S28_25070 IPR000298 Cytochrome c oxidase subunit III-like M4S28_25070 IPR035973 Cytochrome c oxidase subunit III-like superfamily M4S28_25075 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 M4S28_25075 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily M4S28_25080 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site M4S28_25080 IPR036927 Cytochrome c oxidase-like, subunit I superfamily M4S28_25080 IPR014241 Cytochrome c oxidase, subunit I bacterial type M4S28_25080 IPR033944 Cytochrome c oxidase subunit I domain M4S28_25080 IPR023616 Cytochrome c oxidase-like, subunit I domain M4S28_25080 IPR000883 Cytochrome c oxidase subunit I M4S28_25085 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily M4S28_25085 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain M4S28_25085 IPR014222 Cytochrome c oxidase, subunit II M4S28_25085 IPR008972 Cupredoxin M4S28_25085 IPR001505 Copper centre Cu(A) M4S28_25085 IPR034210 Cytochrome c oxidase subunit 2, C-terminal M4S28_25085 IPR002429 Cytochrome c oxidase subunit II-like C-terminal M4S28_25085 IPR005728 Rickettsial palindromic element M4S28_25090 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III M4S28_25090 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III M4S28_25090 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II M4S28_25090 IPR005841 Alpha-D-phosphohexomutase superfamily M4S28_25090 IPR016066 Alpha-D-phosphohexomutase, conserved site M4S28_25090 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I M4S28_25090 IPR005843 Alpha-D-phosphohexomutase, C-terminal M4S28_25090 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily M4S28_25095 IPR004778 Homoserine/Threonine efflux protein M4S28_25095 IPR001123 Amino acid exporter protein, LeuE-type M4S28_25100 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily M4S28_25100 IPR011234 Fumarylacetoacetase-like, C-terminal M4S28_25110 IPR013126 Heat shock protein 70 family M4S28_25110 IPR042054 YegD-like M4S28_25110 IPR018181 Heat shock protein 70, conserved site M4S28_25130 IPR001789 Signal transduction response regulator, receiver domain M4S28_25130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_25130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_25130 IPR015387 LuxQ, periplasmic M4S28_25130 IPR029151 Periplasmic sensor-like domain superfamily M4S28_25130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_25130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_25130 IPR005467 Histidine kinase domain M4S28_25130 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_25130 IPR011006 CheY-like superfamily M4S28_25135 IPR028082 Periplasmic binding protein-like I M4S28_25135 IPR025997 Periplasmic binding protein M4S28_25140 IPR000305 GIY-YIG endonuclease M4S28_25140 IPR035901 GIY-YIG endonuclease superfamily M4S28_25145 IPR007432 Protein of unknown function DUF480 M4S28_25145 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25145 IPR036390 Winged helix DNA-binding domain superfamily M4S28_25155 IPR007458 Protein of unknown function DUF496 M4S28_25170 IPR011006 CheY-like superfamily M4S28_25170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_25170 IPR005467 Histidine kinase domain M4S28_25170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_25170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_25170 IPR003660 HAMP domain M4S28_25170 IPR036641 HPT domain superfamily M4S28_25170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_25170 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain M4S28_25170 IPR001789 Signal transduction response regulator, receiver domain M4S28_25170 IPR019247 Histidine kinase BarA, N-terminal M4S28_25170 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_25175 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family M4S28_25175 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site M4S28_25175 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain M4S28_25175 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain M4S28_25175 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I M4S28_25175 IPR036291 NAD(P)-binding domain superfamily M4S28_25180 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M4S28_25180 IPR017938 Riboflavin synthase-like beta-barrel M4S28_25180 IPR036010 2Fe-2S ferredoxin-like superfamily M4S28_25180 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain M4S28_25180 IPR012675 Beta-grasp domain superfamily M4S28_25180 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain M4S28_25180 IPR017927 FAD-binding domain, ferredoxin reductase-type M4S28_25180 IPR001433 Oxidoreductase FAD/NAD(P)-binding M4S28_25180 IPR000951 Phthalate dioxygenase reductase M4S28_25185 IPR010048 Hydroxylamine reductase M4S28_25185 IPR016099 Prismane-like, alpha/beta-sandwich M4S28_25185 IPR011254 Prismane-like superfamily M4S28_25185 IPR016100 Prismane, alpha-bundle M4S28_25185 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase M4S28_25200 IPR001123 Amino acid exporter protein, LeuE-type M4S28_25200 IPR004778 Homoserine/Threonine efflux protein M4S28_25205 IPR000847 Transcription regulator HTH, LysR M4S28_25205 IPR005119 LysR, substrate-binding M4S28_25205 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M4S28_25205 IPR017685 HTH-type transcriptional regulator ArgP M4S28_25205 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25205 IPR036390 Winged helix DNA-binding domain superfamily M4S28_25215 IPR002293 Amino acid/polyamine transporter I M4S28_25220 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25220 IPR004839 Aminotransferase, class I/classII M4S28_25220 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_25220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_25220 IPR000524 Transcription regulator HTH, GntR M4S28_25220 IPR036390 Winged helix DNA-binding domain superfamily M4S28_25230 IPR004937 Urea transporter M4S28_25230 IPR029020 Ammonium/urea transporter M4S28_25260 IPR011703 ATPase, AAA-3 M4S28_25260 IPR041628 ChlI/MoxR, AAA lid domain M4S28_25260 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25275 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme M4S28_25275 IPR023885 4Fe4S-binding SPASM domain M4S28_25275 IPR007197 Radical SAM M4S28_25275 IPR013785 Aldolase-type TIM barrel M4S28_25280 IPR017850 Alkaline-phosphatase-like, core domain superfamily M4S28_25280 IPR000917 Sulfatase, N-terminal M4S28_25280 IPR024607 Sulfatase, conserved site M4S28_25280 IPR032158 Domain of unknown function DUF4994 M4S28_25285 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_25285 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_25285 IPR036291 NAD(P)-binding domain superfamily M4S28_25290 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_25290 IPR011006 CheY-like superfamily M4S28_25290 IPR000792 Transcription regulator LuxR, C-terminal M4S28_25290 IPR001789 Signal transduction response regulator, receiver domain M4S28_25295 IPR002347 Short-chain dehydrogenase/reductase SDR M4S28_25295 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_25295 IPR036291 NAD(P)-binding domain superfamily M4S28_25325 IPR009057 Homeobox-like domain superfamily M4S28_25325 IPR020449 Transcription regulator HTH, AraC- type M4S28_25325 IPR018060 DNA binding HTH domain, AraC-type M4S28_25325 IPR018062 HTH domain AraC-type, conserved site M4S28_25340 IPR001248 Purine-cytosine permease M4S28_25340 IPR038271 Purine-cytosine permease superfamily M4S28_25340 IPR030191 Cytosine permease M4S28_25345 IPR013108 Amidohydrolase 3 M4S28_25345 IPR011059 Metal-dependent hydrolase, composite domain superfamily M4S28_25345 IPR032466 Metal-dependent hydrolase M4S28_25350 IPR012156 Cold shock, CspA M4S28_25350 IPR011129 Cold shock domain M4S28_25350 IPR019844 Cold-shock (CSD) domain M4S28_25350 IPR002059 Cold-shock protein, DNA-binding M4S28_25350 IPR012340 Nucleic acid-binding, OB-fold M4S28_25355 IPR029787 Nucleotide cyclase M4S28_25355 IPR000160 GGDEF domain M4S28_25370 IPR028622 ATP-dependent RNA helicase RhlE M4S28_25370 IPR011545 DEAD/DEAH box helicase domain M4S28_25370 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25370 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M4S28_25370 IPR014014 RNA helicase, DEAD-box type, Q motif M4S28_25370 IPR001650 Helicase, C-terminal M4S28_25370 IPR014001 Helicase superfamily 1/2, ATP-binding domain M4S28_25375 IPR001633 EAL domain M4S28_25375 IPR035919 EAL domain superfamily M4S28_25375 IPR000160 GGDEF domain M4S28_25375 IPR005330 MHYT domain M4S28_25375 IPR029787 Nucleotide cyclase M4S28_25390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_25390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_25390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_25390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_25390 IPR013727 Two-component sensor kinase, N-terminal M4S28_25390 IPR003660 HAMP domain M4S28_25390 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_25390 IPR005467 Histidine kinase domain M4S28_25395 IPR011006 CheY-like superfamily M4S28_25395 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_25395 IPR039420 Transcriptional regulatory protein WalR-like M4S28_25395 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25395 IPR001789 Signal transduction response regulator, receiver domain M4S28_25400 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M4S28_25400 IPR022831 Multidrug resistance protein MdtB M4S28_25400 IPR001036 Acriflavin resistance protein M4S28_25410 IPR003423 Outer membrane efflux protein M4S28_25410 IPR010131 RND efflux system, outer membrane lipoprotein, NodT M4S28_25420 IPR008276 Concentrative nucleoside transporter M4S28_25420 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial M4S28_25420 IPR011657 Concentrative nucleoside transporter C-terminal domain M4S28_25420 IPR002668 Concentrative nucleoside transporter N-terminal domain M4S28_25420 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain M4S28_25430 IPR036095 PTS system IIB component-like superfamily M4S28_25430 IPR013011 Phosphotransferase system, EIIB component, type 2 M4S28_25430 IPR003501 Phosphotransferase system, EIIB component, type 2/3 M4S28_25435 IPR004703 Phosphotransferase system, sugar-specific permease component M4S28_25440 IPR002178 PTS EIIA type-2 domain M4S28_25440 IPR016152 Phosphotransferase/anion transporter M4S28_25445 IPR037522 HD-GYP domain M4S28_25445 IPR006674 HD domain M4S28_25445 IPR003607 HD/PDEase domain M4S28_25445 IPR006675 HDIG domain M4S28_25450 IPR016181 Acyl-CoA N-acyltransferase M4S28_25450 IPR000182 GNAT domain M4S28_25455 IPR032404 Two-component sensor protein CpxA, periplasmic domain M4S28_25455 IPR038515 CpxA, periplasmic domain superfamily M4S28_25455 IPR003660 HAMP domain M4S28_25455 IPR003594 Histidine kinase/HSP90-like ATPase M4S28_25455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M4S28_25455 IPR005467 Histidine kinase domain M4S28_25455 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain M4S28_25455 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily M4S28_25455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal M4S28_25460 IPR011006 CheY-like superfamily M4S28_25460 IPR001867 OmpR/PhoB-type DNA-binding domain M4S28_25460 IPR016032 Signal transduction response regulator, C-terminal effector M4S28_25460 IPR001789 Signal transduction response regulator, receiver domain M4S28_25460 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25460 IPR039420 Transcriptional regulatory protein WalR-like M4S28_25465 IPR035919 EAL domain superfamily M4S28_25465 IPR000160 GGDEF domain M4S28_25465 IPR029787 Nucleotide cyclase M4S28_25465 IPR000014 PAS domain M4S28_25465 IPR035965 PAS domain superfamily M4S28_25465 IPR001633 EAL domain M4S28_25475 IPR013655 PAS fold-3 M4S28_25475 IPR013656 PAS fold-4 M4S28_25475 IPR035965 PAS domain superfamily M4S28_25475 IPR000700 PAS-associated, C-terminal M4S28_25475 IPR000014 PAS domain M4S28_25475 IPR001610 PAC motif M4S28_25475 IPR035919 EAL domain superfamily M4S28_25475 IPR000160 GGDEF domain M4S28_25475 IPR001633 EAL domain M4S28_25475 IPR029787 Nucleotide cyclase M4S28_25485 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25485 IPR003439 ABC transporter-like M4S28_25485 IPR003593 AAA+ ATPase domain M4S28_25505 IPR016192 APOBEC/CMP deaminase, zinc-binding M4S28_25505 IPR002125 Cytidine and deoxycytidylate deaminase domain M4S28_25505 IPR016193 Cytidine deaminase-like M4S28_25505 IPR024072 Dihydrofolate reductase-like domain superfamily M4S28_25505 IPR004794 Riboflavin biosynthesis protein RibD M4S28_25505 IPR011549 Riboflavin-specific deaminase, C-terminal M4S28_25505 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal M4S28_25515 IPR006145 Pseudouridine synthase, RsuA/RluA M4S28_25515 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site M4S28_25515 IPR020103 Pseudouridine synthase, catalytic domain superfamily M4S28_25530 IPR010106 Recombination-promoting nuclease RpnA M4S28_25530 IPR006842 Transposase (putative), YhgA-like M4S28_25535 IPR025669 AAA domain M4S28_25535 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25560 IPR005412 DNA-binding protein Fis M4S28_25560 IPR009057 Homeobox-like domain superfamily M4S28_25560 IPR002197 DNA binding HTH domain, Fis-type M4S28_25585 IPR003477 mRNA interferase PemK-like M4S28_25585 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor M4S28_25600 IPR041468 ParB/Spo0J, HTH domain M4S28_25600 IPR004437 ParB/RepB/Spo0J partition protein M4S28_25600 IPR003115 ParB/Sulfiredoxin M4S28_25600 IPR036086 ParB/Sulfiredoxin superfamily M4S28_25600 IPR023705 Nucleoid occlusion protein M4S28_25635 IPR008258 Transglycosylase SLT domain 1 M4S28_25635 IPR023346 Lysozyme-like domain superfamily M4S28_25645 IPR014059 Conjugative relaxase, N-terminal M4S28_25645 IPR009767 DNA helicase, TraI type M4S28_25645 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25645 IPR040668 TraI, 2B/2B-like domain M4S28_25645 IPR040987 TraI, N-terminal subdomain M4S28_25645 IPR014862 TrwC relaxase M4S28_25645 IPR014129 Conjugative transfer relaxase protein TraI M4S28_25670 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25670 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain M4S28_25670 IPR022585 TraD coupling protein, N-terminal M4S28_25670 IPR014128 Type IV conjugative transfer system, coupling protein TraD M4S28_25685 IPR010927 Type IV conjugative transfer system protein TraH M4S28_25695 IPR039555 F plasmid transfer operon protein M4S28_25695 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF M4S28_25720 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN M4S28_25730 IPR009649 TraU M4S28_25745 IPR014117 Type-IV secretion system protein TraC M4S28_25745 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25745 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase M4S28_25800 IPR036397 Ribonuclease H superfamily M4S28_25800 IPR032874 DDE domain M4S28_25800 IPR001584 Integrase, catalytic core M4S28_25800 IPR012337 Ribonuclease H-like superfamily M4S28_25825 IPR006119 Resolvase, N-terminal catalytic domain M4S28_25825 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily M4S28_25825 IPR006120 Resolvase, HTH domain M4S28_25825 IPR009057 Homeobox-like domain superfamily M4S28_25825 IPR006118 Recombinase, conserved site M4S28_25860 IPR005119 LysR, substrate-binding M4S28_25860 IPR036388 Winged helix-like DNA-binding domain superfamily M4S28_25860 IPR036390 Winged helix DNA-binding domain superfamily M4S28_25860 IPR000847 Transcription regulator HTH, LysR M4S28_25870 IPR020476 NUDIX hydrolase M4S28_25870 IPR020084 NUDIX hydrolase, conserved site M4S28_25870 IPR000086 NUDIX hydrolase domain M4S28_25870 IPR033713 Phosphatase NudJ M4S28_25870 IPR015797 NUDIX hydrolase-like domain superfamily M4S28_25880 IPR000477 Reverse transcriptase domain M4S28_25895 IPR003346 Transposase, IS116/IS110/IS902 M4S28_25895 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal M4S28_25925 IPR012337 Ribonuclease H-like superfamily M4S28_25925 IPR036397 Ribonuclease H superfamily M4S28_25925 IPR032874 DDE domain M4S28_25925 IPR001584 Integrase, catalytic core M4S28_25930 IPR020904 Short-chain dehydrogenase/reductase, conserved site M4S28_25930 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase M4S28_25930 IPR036291 NAD(P)-binding domain superfamily M4S28_25935 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M4S28_25935 IPR010060 Non-ribosomal peptide synthase M4S28_25935 IPR001242 Condensation domain M4S28_25935 IPR010071 Amino acid adenylation domain M4S28_25935 IPR036736 ACP-like superfamily M4S28_25935 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_25935 IPR020845 AMP-binding, conserved site M4S28_25935 IPR000873 AMP-dependent synthetase/ligase M4S28_25935 IPR009081 Phosphopantetheine binding ACP domain M4S28_25935 IPR006162 Phosphopantetheine attachment site M4S28_25935 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M4S28_25935 IPR042099 AMP-dependent synthetase-like superfamily M4S28_25940 IPR037294 ABC transporter, BtuC-like M4S28_25940 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_25945 IPR037294 ABC transporter, BtuC-like M4S28_25945 IPR000522 ABC transporter, permease protein, BtuC-like M4S28_25950 IPR002491 ABC transporter periplasmic binding domain M4S28_25950 IPR033870 FatB domain M4S28_25955 IPR037066 TonB-dependent receptor, plug domain superfamily M4S28_25955 IPR012910 TonB-dependent receptor, plug domain M4S28_25955 IPR030149 TonB-dependent siderophore receptor FcuA/FatA M4S28_25955 IPR000531 TonB-dependent receptor-like, beta-barrel M4S28_25955 IPR010105 TonB-dependent siderophore receptor M4S28_25955 IPR010917 TonB-dependent receptor, conserved site M4S28_25955 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M4S28_25955 IPR010916 TonB box, conserved site M4S28_25955 IPR039423 TonB-dependent receptor-like M4S28_25960 IPR000873 AMP-dependent synthetase/ligase M4S28_25960 IPR042099 AMP-dependent synthetase-like superfamily M4S28_25960 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_25960 IPR036736 ACP-like superfamily M4S28_25960 IPR010071 Amino acid adenylation domain M4S28_25960 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M4S28_25960 IPR001242 Condensation domain M4S28_25960 IPR009081 Phosphopantetheine binding ACP domain M4S28_25960 IPR020845 AMP-binding, conserved site M4S28_25965 IPR029058 Alpha/Beta hydrolase fold M4S28_25965 IPR001031 Thioesterase M4S28_25965 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS M4S28_25970 IPR036188 FAD/NAD(P)-binding domain superfamily M4S28_25970 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase M4S28_25970 IPR031043 Putative histamine N-monooxygenase M4S28_25975 IPR036736 ACP-like superfamily M4S28_25975 IPR006162 Phosphopantetheine attachment site M4S28_25975 IPR010071 Amino acid adenylation domain M4S28_25975 IPR020806 Polyketide synthase, phosphopantetheine-binding domain M4S28_25975 IPR009081 Phosphopantetheine binding ACP domain M4S28_25975 IPR042099 AMP-dependent synthetase-like superfamily M4S28_25975 IPR000873 AMP-dependent synthetase/ligase M4S28_25975 IPR020845 AMP-binding, conserved site M4S28_25975 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_25975 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily M4S28_25975 IPR001242 Condensation domain M4S28_25980 IPR023523 Histidine decarboxylase, bacteria M4S28_25980 IPR002129 Pyridoxal phosphate-dependent decarboxylase M4S28_25980 IPR015424 Pyridoxal phosphate-dependent transferase M4S28_25980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain M4S28_25980 IPR021115 Pyridoxal-phosphate binding site M4S28_25985 IPR017871 ABC transporter, conserved site M4S28_25985 IPR011527 ABC transporter type 1, transmembrane domain M4S28_25985 IPR003593 AAA+ ATPase domain M4S28_25985 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25985 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_25985 IPR003439 ABC transporter-like M4S28_25990 IPR017871 ABC transporter, conserved site M4S28_25990 IPR003439 ABC transporter-like M4S28_25990 IPR036640 ABC transporter type 1, transmembrane domain superfamily M4S28_25990 IPR011527 ABC transporter type 1, transmembrane domain M4S28_25990 IPR003593 AAA+ ATPase domain M4S28_25990 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_25990 IPR011917 ABC transporter, lipid A export, MsbA M4S28_25995 IPR006219 DHAP synthase, class 1 M4S28_25995 IPR006218 DAHP synthetase I/KDSA M4S28_25995 IPR013785 Aldolase-type TIM barrel M4S28_26000 IPR004561 Isochorismate synthase M4S28_26000 IPR015890 Chorismate-utilising enzyme, C-terminal M4S28_26000 IPR005801 ADC synthase M4S28_26005 IPR020845 AMP-binding, conserved site M4S28_26005 IPR011963 2,3-dihydroxybenzoate-AMP ligase M4S28_26005 IPR000873 AMP-dependent synthetase/ligase M4S28_26005 IPR025110 AMP-binding enzyme, C-terminal domain M4S28_26010 IPR036736 ACP-like superfamily M4S28_26010 IPR016291 Isochorismatase M4S28_26010 IPR000868 Isochorismatase-like M4S28_26010 IPR036380 Isochorismatase-like superfamily M4S28_26010 IPR009081 Phosphopantetheine binding ACP domain M4S28_26015 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_26015 IPR003593 AAA+ ATPase domain M4S28_26015 IPR003439 ABC transporter-like M4S28_26015 IPR017871 ABC transporter, conserved site M4S28_26030 IPR032874 DDE domain M4S28_26030 IPR001584 Integrase, catalytic core M4S28_26030 IPR012337 Ribonuclease H-like superfamily M4S28_26030 IPR036397 Ribonuclease H superfamily M4S28_26065 IPR017871 ABC transporter, conserved site M4S28_26065 IPR003439 ABC transporter-like M4S28_26065 IPR003593 AAA+ ATPase domain M4S28_26065 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_26110 IPR013491 Caudovirus, tape measure, N-terminal M4S28_26150 IPR020891 Uncharacterised protein family UPF0758, conserved site M4S28_26150 IPR001405 Uncharacterised protein family UPF0758 M4S28_26150 IPR025657 RadC-like JAB domain M4S28_26150 IPR037518 MPN domain M4S28_26185 IPR014862 TrwC relaxase M4S28_26185 IPR040987 TraI, N-terminal subdomain M4S28_26185 IPR040668 TraI, 2B/2B-like domain M4S28_26185 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_26185 IPR009767 DNA helicase, TraI type M4S28_26185 IPR014129 Conjugative transfer relaxase protein TraI M4S28_26185 IPR014059 Conjugative relaxase, N-terminal M4S28_26190 IPR022585 TraD coupling protein, N-terminal M4S28_26190 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain M4S28_26190 IPR014128 Type IV conjugative transfer system, coupling protein TraD M4S28_26190 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_26200 IPR014017 UvrD-like DNA helicase, C-terminal M4S28_26200 IPR005751 ATP-dependent DNA helicase PcrA M4S28_26200 IPR000212 DNA helicase, UvrD/REP type M4S28_26200 IPR034739 UvrD/AddA helicase, N-terminal M4S28_26200 IPR013986 DExx box DNA helicase domain superfamily M4S28_26200 IPR027417 P-loop containing nucleoside triphosphate hydrolase M4S28_26200 IPR014016 UvrD-like helicase, ATP-binding domain M4S28_26215 IPR001082 Fimbrial protein pilin M4S28_26215 IPR012902 Prokaryotic N-terminal methylation site M4S28_26215 IPR000983 Bacterial general secretion pathway protein G-type pilin M4S28_26225 IPR001207 Transposase, mutator type M4S28_26245 IPR002197 DNA binding HTH domain, Fis-type M4S28_26245 IPR009057 Homeobox-like domain superfamily M4S28_26245 IPR005412 DNA-binding protein Fis M4S28_26300 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain M4S28_26300 IPR033479 Double Cache domain 1 M4S28_26300 IPR029151 Periplasmic sensor-like domain superfamily M4S28_26300 IPR003660 HAMP domain M4S28_26310 IPR020816 Histone-like DNA-binding protein, conserved site M4S28_26310 IPR000119 Histone-like DNA-binding protein M4S28_26310 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily M4S28_26315 IPR001584 Integrase, catalytic core M4S28_26315 IPR032874 DDE domain M4S28_26315 IPR036397 Ribonuclease H superfamily M4S28_26315 IPR012337 Ribonuclease H-like superfamily M4S28_26330 IPR003400 Biopolymer transport protein ExbD/TolR M4S28_26335 IPR002898 MotA/TolQ/ExbB proton channel M4S28_26340 IPR002898 MotA/TolQ/ExbB proton channel M4S28_26355 IPR000477 Reverse transcriptase domain M4S28_26420 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M4S28_26420 IPR006664 Outer membrane protein, bacterial M4S28_26420 IPR006665 OmpA-like domain M4S28_26420 IPR006690 Outer membrane protein, OmpA-like, conserved site M4S28_26420 IPR036737 OmpA-like domain superfamily M4S28_26420 IPR008722 Outer membrane porin F, N-terminal M4S28_26420 IPR028974 TSP type-3 repeat