locus-tag class description JKJ11_00005 PF00308 Bacterial dnaA protein JKJ11_00005 PF08299 Bacterial dnaA protein helix-turn-helix JKJ11_00005 PF11638 DnaA N-terminal domain JKJ11_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JKJ11_00010 PF02767 DNA polymerase III beta subunit, central domain JKJ11_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JKJ11_00015 PF02463 RecF/RecN/SMC N terminal domain JKJ11_00020 PF01751 Toprim domain JKJ11_00020 PF18053 DNA gyrase B subunit insert domain JKJ11_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_00020 PF00204 DNA gyrase B JKJ11_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JKJ11_00025 PF00011 Hsp20/alpha crystallin family JKJ11_00030 PF00155 Aminotransferase class I and II JKJ11_00035 PF05746 DALR anticodon binding domain JKJ11_00035 PF02092 Glycyl-tRNA synthetase beta subunit JKJ11_00040 PF02091 Glycyl-tRNA synthetase alpha subunit JKJ11_00045 PF01169 Uncharacterized protein family UPF0016 JKJ11_00055 PF01206 Sulfurtransferase TusA JKJ11_00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_00065 PF03466 LysR substrate binding domain JKJ11_00070 PF00034 Cytochrome c JKJ11_00075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JKJ11_00080 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_00080 PF00107 Zinc-binding dehydrogenase JKJ11_00085 PF02803 Thiolase, C-terminal domain JKJ11_00085 PF00108 Thiolase, N-terminal domain JKJ11_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JKJ11_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JKJ11_00090 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_00095 PF09186 Domain of unknown function (DUF1949) JKJ11_00095 PF01205 Uncharacterized protein family UPF0029 JKJ11_00100 PF02386 Cation transport protein JKJ11_00105 PF12724 Flavodoxin domain JKJ11_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_00150 PF03466 LysR substrate binding domain JKJ11_00155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JKJ11_00155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JKJ11_00160 PF04380 Membrane fusogenic activity JKJ11_00165 PF00873 AcrB/AcrD/AcrF family JKJ11_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_00175 PF00440 Bacterial regulatory proteins, tetR family JKJ11_00175 PF16295 Tetracyclin repressor-like, C-terminal domain JKJ11_00180 PF13361 UvrD-like helicase C-terminal domain JKJ11_00180 PF00580 UvrD/REP helicase N-terminal domain JKJ11_00185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JKJ11_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_00230 PF03466 LysR substrate binding domain JKJ11_00250 PF00005 ABC transporter JKJ11_00250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_00255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_00260 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_00265 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_00265 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_00280 PF00704 Glycosyl hydrolases family 18 JKJ11_00280 PF06483 Chitinase C JKJ11_00285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_00295 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JKJ11_00300 PF01432 Peptidase family M3 JKJ11_00305 PF00690 Cation transporter/ATPase, N-terminus JKJ11_00305 PF00689 Cation transporting ATPase, C-terminus JKJ11_00310 PF01037 Lrp/AsnC ligand binding domain JKJ11_00315 PF04445 Putative SAM-dependent methyltransferase JKJ11_00325 PF00892 EamA-like transporter family JKJ11_00330 PF00582 Universal stress protein family JKJ11_00335 PF00210 Ferritin-like domain JKJ11_00340 PF10625 Universal stress protein B (UspB) JKJ11_00350 PF03313 Serine dehydratase alpha chain JKJ11_00370 PF01464 Transglycosylase SLT domain JKJ11_00370 PF01476 LysM domain JKJ11_00390 PF00460 Flagella basal body rod protein JKJ11_00395 PF00460 Flagella basal body rod protein JKJ11_00395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_00400 PF03963 Flagellar hook capping protein - N-terminal region JKJ11_00400 PF13860 FlgD Ig-like domain JKJ11_00400 PF13861 FlgD Tudor-like domain JKJ11_00405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_00405 PF00460 Flagella basal body rod protein JKJ11_00405 PF07559 Flagellar basal body protein FlaE JKJ11_00410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_00410 PF00460 Flagella basal body rod protein JKJ11_00415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_00415 PF00460 Flagella basal body rod protein JKJ11_00420 PF02107 Flagellar L-ring protein JKJ11_00425 PF02119 Flagellar P-ring protein JKJ11_00430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JKJ11_00430 PF10135 Rod binding protein JKJ11_00435 PF00460 Flagella basal body rod protein JKJ11_00435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_00440 PF00669 Bacterial flagellin N-terminal helical region JKJ11_00455 PF00691 OmpA family JKJ11_00455 PF13677 Membrane MotB of proton-channel complex MotA/MotB JKJ11_00460 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_00465 PF04545 Sigma-70, region 4 JKJ11_00465 PF04542 Sigma-70 region 2 JKJ11_00470 PF03748 Flagellar basal body-associated protein FliL JKJ11_00485 PF02561 Flagellar protein FliS JKJ11_00490 PF02465 Flagellar hook-associated protein 2 N-terminus JKJ11_00490 PF07196 Flagellin hook IN motif JKJ11_00490 PF07195 Flagellar hook-associated protein 2 C-terminus JKJ11_00495 PF00700 Bacterial flagellin C-terminal helical region JKJ11_00495 PF00669 Bacterial flagellin N-terminal helical region JKJ11_00505 PF00771 FHIPEP family JKJ11_00510 PF01312 FlhB HrpN YscU SpaS Family JKJ11_00515 PF01311 Bacterial export proteins, family 1 JKJ11_00520 PF01313 Bacterial export proteins, family 3 JKJ11_00525 PF00813 FliP family JKJ11_00530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JKJ11_00545 PF02954 Bacterial regulatory protein, Fis family JKJ11_00545 PF00072 Response regulator receiver domain JKJ11_00545 PF00158 Sigma-54 interaction domain JKJ11_00550 PF02049 Flagellar hook-basal body complex protein FliE JKJ11_00555 PF01514 Secretory protein of YscJ/FliF family JKJ11_00555 PF08345 Flagellar M-ring protein C-terminal JKJ11_00560 PF14842 FliG N-terminal domain JKJ11_00560 PF14841 FliG middle domain JKJ11_00560 PF01706 FliG C-terminal domain JKJ11_00570 PF18269 T3SS EscN ATPase C-terminal domain JKJ11_00570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_00580 PF02646 RmuC family JKJ11_00585 PF01209 ubiE/COQ5 methyltransferase family JKJ11_00590 PF02036 SCP-2 sterol transfer family JKJ11_00595 PF03109 ABC1 family JKJ11_00600 PF02416 mttA/Hcf106 family JKJ11_00605 PF02416 mttA/Hcf106 family JKJ11_00610 PF00902 Sec-independent protein translocase protein (TatC) JKJ11_00615 PF01026 TatD related DNase JKJ11_00620 PF00490 Delta-aminolevulinic acid dehydratase JKJ11_00630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JKJ11_00630 PF00476 DNA polymerase family A JKJ11_00630 PF01612 3'-5' exonuclease JKJ11_00630 PF01367 5'-3' exonuclease, C-terminal SAM fold JKJ11_00635 PF01926 50S ribosome-binding GTPase JKJ11_00640 PF00034 Cytochrome c JKJ11_00650 PF01554 MatE JKJ11_00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_00660 PF00440 Bacterial regulatory proteins, tetR family JKJ11_00670 PF05958 tRNA (Uracil-5-)-methyltransferase JKJ11_00675 PF00593 TonB dependent receptor JKJ11_00675 PF07715 TonB-dependent Receptor Plug Domain JKJ11_00685 PF01177 Asp/Glu/Hydantoin racemase JKJ11_00785 PF03631 Virulence factor BrkB JKJ11_00790 PF02580 D-Tyr-tRNA(Tyr) deacylase JKJ11_00795 PF09500 Putative thioesterase (yiiD_Cterm) JKJ11_00795 PF00583 Acetyltransferase (GNAT) family JKJ11_00805 PF01293 Phosphoenolpyruvate carboxykinase JKJ11_00810 PF01430 Hsp33 protein JKJ11_00815 PF01479 S4 domain JKJ11_00820 PF11356 Type II secretion system protein C JKJ11_00825 PF03958 Bacterial type II/III secretion system short domain JKJ11_00825 PF00263 Bacterial type II and III secretion system protein JKJ11_00830 PF00437 Type II/IV secretion system protein JKJ11_00835 PF00482 Type II secretion system (T2SS), protein F JKJ11_00840 PF08334 Type II secretion system (T2SS), protein G JKJ11_00840 PF07963 Prokaryotic N-terminal methylation motif JKJ11_00845 PF12019 Type II transport protein GspH JKJ11_00850 PF07963 Prokaryotic N-terminal methylation motif JKJ11_00850 PF02501 Type II secretion system (T2SS), protein I JKJ11_00855 PF07963 Prokaryotic N-terminal methylation motif JKJ11_00855 PF11612 Type II secretion system (T2SS), protein J JKJ11_00860 PF03934 Type II secretion system (T2SS), protein K JKJ11_00865 PF12693 GspL periplasmic domain JKJ11_00865 PF05134 Type II secretion system (T2SS), protein L JKJ11_00870 PF04612 Type II secretion system (T2SS), protein M JKJ11_00875 PF01203 Type II secretion system (T2SS), protein N JKJ11_00880 PF00459 Inositol monophosphatase family JKJ11_00885 PF00293 NUDIX domain JKJ11_00890 PF01521 Iron-sulphur cluster biosynthesis JKJ11_00890 PF01106 NifU-like domain JKJ11_00895 PF00156 Phosphoribosyl transferase domain JKJ11_00900 PF00561 alpha/beta hydrolase fold JKJ11_00910 PF17674 HHH domain JKJ11_00910 PF00575 S1 RNA binding domain JKJ11_00910 PF09371 Tex-like protein N-terminal domain JKJ11_00910 PF16921 Tex protein YqgF-like domain JKJ11_00915 PF08443 RimK-like ATP-grasp domain JKJ11_00915 PF18030 RimK PreATP-grasp domain JKJ11_00920 PF01595 Cyclin M transmembrane N-terminal domain JKJ11_00920 PF00571 CBS domain JKJ11_00925 PF00216 Bacterial DNA-binding protein JKJ11_00935 PF02844 Phosphoribosylglycinamide synthetase, N domain JKJ11_00935 PF02843 Phosphoribosylglycinamide synthetase, C domain JKJ11_00935 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JKJ11_00940 PF01808 AICARFT/IMPCHase bienzyme JKJ11_00940 PF02142 MGS-like domain JKJ11_00945 PF13411 MerR HTH family regulatory protein JKJ11_00950 PF18500 CadC C-terminal domain 1 JKJ11_00950 PF00486 Transcriptional regulatory protein, C terminal JKJ11_00955 PF13520 Amino acid permease JKJ11_00960 PF01276 Orn/Lys/Arg decarboxylase, major domain JKJ11_00960 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JKJ11_00960 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JKJ11_00965 PF00672 HAMP domain JKJ11_00965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_00965 PF17200 Single Cache domain 2 JKJ11_01025 PF02954 Bacterial regulatory protein, Fis family JKJ11_01030 PF01207 Dihydrouridine synthase (Dus) JKJ11_01040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JKJ11_01040 PF02785 Biotin carboxylase C-terminal domain JKJ11_01040 PF00289 Biotin carboxylase, N-terminal domain JKJ11_01045 PF00364 Biotin-requiring enzyme JKJ11_01050 PF01220 Dehydroquinase class II JKJ11_01055 PF16177 Acetyl-coenzyme A synthetase N-terminus JKJ11_01055 PF00501 AMP-binding enzyme JKJ11_01055 PF13193 AMP-binding enzyme C-terminal domain JKJ11_01070 PF12832 MFS_1 like family JKJ11_01075 PF00672 HAMP domain JKJ11_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_01075 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_01075 PF01627 Hpt domain JKJ11_01075 PF00072 Response regulator receiver domain JKJ11_01090 PF00474 Sodium:solute symporter family JKJ11_01100 PF00196 Bacterial regulatory proteins, luxR family JKJ11_01100 PF00072 Response regulator receiver domain JKJ11_01105 PF11412 Disulphide bond corrector protein DsbC JKJ11_01105 PF02683 Cytochrome C biogenesis protein transmembrane region JKJ11_01110 PF03605 Anaerobic c4-dicarboxylate membrane transporter JKJ11_01115 PF00206 Lyase JKJ11_01115 PF10415 Fumarase C C-terminus JKJ11_01120 PF04186 FxsA cytoplasmic membrane protein JKJ11_01130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JKJ11_01130 PF06827 Zinc finger found in FPG and IleRS JKJ11_01130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JKJ11_01135 PF03279 Bacterial lipid A biosynthesis acyltransferase JKJ11_01140 PF03279 Bacterial lipid A biosynthesis acyltransferase JKJ11_01145 PF00440 Bacterial regulatory proteins, tetR family JKJ11_01150 PF04127 DNA / pantothenate metabolism flavoprotein JKJ11_01150 PF02441 Flavoprotein JKJ11_01155 PF04002 RadC-like JAB domain JKJ11_01160 PF00830 Ribosomal L28 family JKJ11_01165 PF00471 Ribosomal protein L33 JKJ11_01170 PF00588 SpoU rRNA Methylase family JKJ11_01175 PF00246 Zinc carboxypeptidase JKJ11_01175 PF18027 Cytosolic carboxypeptidase N-terminal domain JKJ11_01180 PF16527 Two-component sensor protein CpxA, periplasmic domain JKJ11_01180 PF00672 HAMP domain JKJ11_01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_01180 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_01185 PF00072 Response regulator receiver domain JKJ11_01185 PF00486 Transcriptional regulatory protein, C terminal JKJ11_01190 PF07813 LTXXQ motif family protein JKJ11_01195 PF16916 Dimerisation domain of Zinc Transporter JKJ11_01195 PF01545 Cation efflux family JKJ11_01200 PF00365 Phosphofructokinase JKJ11_01205 PF00121 Triosephosphate isomerase JKJ11_01230 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JKJ11_01235 PF06005 Cell division protein ZapB JKJ11_01240 PF00440 Bacterial regulatory proteins, tetR family JKJ11_01240 PF08360 QacR-like protein, C-terminal region JKJ11_01250 PF01551 Peptidase family M23 JKJ11_01255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JKJ11_01255 PF01676 Metalloenzyme superfamily JKJ11_01260 PF00581 Rhodanese-like domain JKJ11_01265 PF02556 Preprotein translocase subunit SecB JKJ11_01270 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JKJ11_01270 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JKJ11_01275 PF06426 Serine acetyltransferase, N-terminal JKJ11_01275 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_01280 PF01554 MatE JKJ11_01285 PF00166 Chaperonin 10 Kd subunit JKJ11_01290 PF00118 TCP-1/cpn60 chaperonin family JKJ11_01300 PF02308 MgtC family JKJ11_01305 PF04055 Radical SAM superfamily JKJ11_01310 PF09285 Elongation factor P, C-terminal JKJ11_01310 PF08207 Elongation factor P (EF-P) KOW-like domain JKJ11_01310 PF01132 Elongation factor P (EF-P) OB domain JKJ11_01320 PF02313 Fumarate reductase subunit D JKJ11_01325 PF02300 Fumarate reductase subunit C JKJ11_01330 PF13183 4Fe-4S dicluster domain JKJ11_01330 PF13085 2Fe-2S iron-sulfur cluster binding domain JKJ11_01335 PF02910 Fumarate reductase flavoprotein C-term JKJ11_01335 PF00890 FAD binding domain JKJ11_01340 PF00152 tRNA synthetases class II (D, K and N) JKJ11_01350 PF03600 Citrate transporter JKJ11_01350 PF02080 TrkA-C domain JKJ11_01355 PF02666 Phosphatidylserine decarboxylase JKJ11_01360 PF03193 RsgA GTPase JKJ11_01365 PF00929 Exonuclease JKJ11_01420 PF08331 Domain of unknown function (DUF1730) JKJ11_01425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JKJ11_01430 PF01520 N-acetylmuramoyl-L-alanine amidase JKJ11_01435 PF08676 MutL C terminal dimerisation domain JKJ11_01435 PF01119 DNA mismatch repair protein, C-terminal domain JKJ11_01445 PF17209 Hfq protein JKJ11_01450 PF16360 GTP-binding GTPase Middle Region JKJ11_01450 PF01926 50S ribosome-binding GTPase JKJ11_01450 PF13167 GTP-binding GTPase N-terminal JKJ11_01455 PF01145 SPFH domain / Band 7 family JKJ11_01455 PF12221 Bacterial membrane protein N terminal JKJ11_01460 PF01145 SPFH domain / Band 7 family JKJ11_01465 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JKJ11_01470 PF00709 Adenylosuccinate synthetase JKJ11_01475 PF08238 Sel1 repeat JKJ11_01480 PF08206 Ribonuclease B OB domain JKJ11_01480 PF17876 Cold shock domain JKJ11_01480 PF08461 Ribonuclease R winged-helix domain JKJ11_01480 PF00773 RNB domain JKJ11_01480 PF00575 S1 RNA binding domain JKJ11_01485 PF00588 SpoU rRNA Methylase family JKJ11_01485 PF08032 RNA 2'-O ribose methyltransferase substrate binding JKJ11_01490 PF04102 SlyX JKJ11_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_01500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JKJ11_01505 PF13309 HTH domain JKJ11_01505 PF08348 YheO-like PAS domain JKJ11_01510 PF02635 DsrE/DsrF-like family JKJ11_01515 PF02635 DsrE/DsrF-like family JKJ11_01525 PF00164 Ribosomal protein S12/S23 JKJ11_01530 PF00177 Ribosomal protein S7p/S5e JKJ11_01535 PF00679 Elongation factor G C-terminus JKJ11_01535 PF14492 Elongation Factor G, domain II JKJ11_01535 PF03764 Elongation factor G, domain IV JKJ11_01535 PF00009 Elongation factor Tu GTP binding domain JKJ11_01535 PF03144 Elongation factor Tu domain 2 JKJ11_01540 PF00009 Elongation factor Tu GTP binding domain JKJ11_01540 PF03144 Elongation factor Tu domain 2 JKJ11_01540 PF03143 Elongation factor Tu C-terminal domain JKJ11_01545 PF04324 BFD-like [2Fe-2S] binding domain JKJ11_01550 PF00210 Ferritin-like domain JKJ11_01555 PF00338 Ribosomal protein S10p/S20e JKJ11_01560 PF00297 Ribosomal protein L3 JKJ11_01565 PF00573 Ribosomal protein L4/L1 family JKJ11_01570 PF00276 Ribosomal protein L23 JKJ11_01575 PF03947 Ribosomal Proteins L2, C-terminal domain JKJ11_01575 PF00181 Ribosomal Proteins L2, RNA binding domain JKJ11_01580 PF00203 Ribosomal protein S19 JKJ11_01585 PF00237 Ribosomal protein L22p/L17e JKJ11_01590 PF00189 Ribosomal protein S3, C-terminal domain JKJ11_01590 PF07650 KH domain JKJ11_01595 PF00252 Ribosomal protein L16p/L10e JKJ11_01600 PF00831 Ribosomal L29 protein JKJ11_01605 PF00366 Ribosomal protein S17 JKJ11_01610 PF00238 Ribosomal protein L14p/L23e JKJ11_01615 PF00467 KOW motif JKJ11_01615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JKJ11_01620 PF00281 Ribosomal protein L5 JKJ11_01620 PF00673 ribosomal L5P family C-terminus JKJ11_01625 PF00253 Ribosomal protein S14p/S29e JKJ11_01630 PF00410 Ribosomal protein S8 JKJ11_01635 PF00347 Ribosomal protein L6 JKJ11_01640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JKJ11_01645 PF00333 Ribosomal protein S5, N-terminal domain JKJ11_01645 PF03719 Ribosomal protein S5, C-terminal domain JKJ11_01650 PF00327 Ribosomal protein L30p/L7e JKJ11_01655 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JKJ11_01660 PF00344 SecY translocase JKJ11_01665 PF00444 Ribosomal protein L36 JKJ11_01670 PF00416 Ribosomal protein S13/S18 JKJ11_01675 PF00411 Ribosomal protein S11 JKJ11_01680 PF01479 S4 domain JKJ11_01680 PF00163 Ribosomal protein S4/S9 N-terminal domain JKJ11_01685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JKJ11_01685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JKJ11_01685 PF01000 RNA polymerase Rpb3/RpoA insert domain JKJ11_01690 PF01196 Ribosomal protein L17 JKJ11_01700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JKJ11_01700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_01710 PF13673 Acetyltransferase (GNAT) domain JKJ11_01715 PF02872 5'-nucleotidase, C-terminal domain JKJ11_01715 PF00149 Calcineurin-like phosphoesterase JKJ11_01720 PF10414 Sirohaem synthase dimerisation region JKJ11_01720 PF14824 Sirohaem biosynthesis protein central JKJ11_01720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JKJ11_01725 PF01507 Phosphoadenosine phosphosulfate reductase family JKJ11_01730 PF00009 Elongation factor Tu GTP binding domain JKJ11_01735 PF02080 TrkA-C domain JKJ11_01735 PF03600 Citrate transporter JKJ11_01760 PF00005 ABC transporter JKJ11_01775 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JKJ11_01785 PF01625 Peptide methionine sulfoxide reductase JKJ11_01790 PF17243 POTRA domain TamA domain 1 JKJ11_01790 PF07244 Surface antigen variable number repeat JKJ11_01790 PF01103 Surface antigen JKJ11_01795 PF04357 TamB, inner membrane protein subunit of TAM complex JKJ11_01810 PF00719 Inorganic pyrophosphatase JKJ11_01815 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JKJ11_01820 PF08245 Mur ligase middle domain JKJ11_01820 PF01225 Mur ligase family, catalytic domain JKJ11_01820 PF02875 Mur ligase family, glutamate ligase domain JKJ11_01825 PF02441 Flavoprotein JKJ11_01835 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_01840 PF00005 ABC transporter JKJ11_01845 PF04751 Protein of unknown function (DUF615) JKJ11_01850 PF01523 Putative modulator of DNA gyrase JKJ11_01855 PF00571 CBS domain JKJ11_01855 PF01769 Divalent cation transporter JKJ11_01855 PF03448 MgtE intracellular N domain JKJ11_01860 PF00381 PTS HPr component phosphorylation site JKJ11_01865 PF03668 P-loop ATPase protein family JKJ11_01870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_01875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JKJ11_01880 PF00309 Sigma-54 factor, Activator interacting domain (AID) JKJ11_01880 PF04963 Sigma-54 factor, core binding domain JKJ11_01880 PF04552 Sigma-54, DNA binding domain JKJ11_01885 PF12399 Branched-chain amino acid ATP-binding cassette transporter JKJ11_01885 PF00005 ABC transporter JKJ11_01890 PF03968 OstA-like protein JKJ11_01905 PF01380 SIS domain JKJ11_01905 PF00571 CBS domain JKJ11_01910 PF01699 Sodium/calcium exchanger protein JKJ11_01915 PF00005 ABC transporter JKJ11_01920 PF02405 Permease MlaE JKJ11_01925 PF02470 MlaD protein JKJ11_01930 PF05494 MlaC protein JKJ11_01940 PF01722 BolA-like protein JKJ11_01945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JKJ11_01950 PF01553 Acyltransferase JKJ11_01955 PF01042 Endoribonuclease L-PSP JKJ11_01960 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JKJ11_01960 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JKJ11_01965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JKJ11_01965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JKJ11_01970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JKJ11_01970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JKJ11_01980 PF06877 Regulator of ribonuclease activity B JKJ11_01990 PF05188 MutS domain II JKJ11_01990 PF05192 MutS domain III JKJ11_01990 PF05190 MutS family domain IV JKJ11_01990 PF00488 MutS domain V JKJ11_01990 PF01624 MutS domain I JKJ11_01995 PF02464 Competence-damaged protein JKJ11_02000 PF00154 recA bacterial DNA recombination protein JKJ11_02005 PF02631 RecX family JKJ11_02010 PF02272 DHHA1 domain JKJ11_02010 PF01411 tRNA synthetases class II (A) JKJ11_02010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JKJ11_02015 PF00696 Amino acid kinase family JKJ11_02015 PF01842 ACT domain JKJ11_02015 PF13840 ACT domain JKJ11_02020 PF02599 Global regulator protein family JKJ11_02065 PF04277 Oxaloacetate decarboxylase, gamma chain JKJ11_02070 PF00364 Biotin-requiring enzyme JKJ11_02070 PF00682 HMGL-like JKJ11_02070 PF02436 Conserved carboxylase domain JKJ11_02075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JKJ11_02080 PF00107 Zinc-binding dehydrogenase JKJ11_02080 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_02085 PF09335 SNARE associated Golgi protein JKJ11_02090 PF00675 Insulinase (Peptidase family M16) JKJ11_02090 PF05193 Peptidase M16 inactive domain JKJ11_02095 PF04262 Glutamate-cysteine ligase JKJ11_02100 PF02664 S-Ribosylhomocysteinase (LuxS) JKJ11_02105 PF03652 Holliday junction resolvase JKJ11_02110 PF02622 Uncharacterized ACR, COG1678 JKJ11_02115 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JKJ11_02115 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JKJ11_02120 PF04452 RNA methyltransferase JKJ11_02125 PF04231 Endonuclease I JKJ11_02130 PF10263 SprT-like family JKJ11_02130 PF17283 SprT-like zinc ribbon domain JKJ11_02140 PF02773 S-adenosylmethionine synthetase, C-terminal domain JKJ11_02140 PF02772 S-adenosylmethionine synthetase, central domain JKJ11_02140 PF00438 S-adenosylmethionine synthetase, N-terminal domain JKJ11_02155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JKJ11_02155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JKJ11_02160 PF00162 Phosphoglycerate kinase JKJ11_02165 PF01116 Fructose-bisphosphate aldolase class-II JKJ11_02170 PF00924 Mechanosensitive ion channel JKJ11_02170 PF05552 Conserved TM helix JKJ11_02180 PF01810 LysE type translocator JKJ11_02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_02185 PF03466 LysR substrate binding domain JKJ11_02195 PF01842 ACT domain JKJ11_02195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_02195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JKJ11_02200 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JKJ11_02205 PF01812 5-formyltetrahydrofolate cyclo-ligase family JKJ11_02215 PF05164 Cell division protein ZapA JKJ11_02220 PF03695 Uncharacterised protein family (UPF0149) JKJ11_02225 PF01494 FAD binding domain JKJ11_02230 PF01494 FAD binding domain JKJ11_02240 PF03129 Anticodon binding domain JKJ11_02240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JKJ11_02240 PF04073 Aminoacyl-tRNA editing domain JKJ11_02250 PF03937 Flavinator of succinate dehydrogenase JKJ11_02255 PF00890 FAD binding domain JKJ11_02255 PF02910 Fumarate reductase flavoprotein C-term JKJ11_02260 PF04542 Sigma-70 region 2 JKJ11_02260 PF08281 Sigma-70, region 4 JKJ11_02265 PF03873 Anti sigma-E protein RseA, C-terminal domain JKJ11_02265 PF03872 Anti sigma-E protein RseA, N-terminal domain JKJ11_02270 PF03888 MucB/RseB N-terminal domain JKJ11_02270 PF17188 MucB/RseB C-terminal domain JKJ11_02280 PF00009 Elongation factor Tu GTP binding domain JKJ11_02280 PF06421 GTP-binding protein LepA C-terminus JKJ11_02280 PF00679 Elongation factor G C-terminus JKJ11_02280 PF03144 Elongation factor Tu domain 2 JKJ11_02285 PF10502 Signal peptidase, peptidase S26 JKJ11_02290 PF00035 Double-stranded RNA binding motif JKJ11_02290 PF14622 Ribonuclease-III-like JKJ11_02295 PF07650 KH domain JKJ11_02295 PF01926 50S ribosome-binding GTPase JKJ11_02300 PF11967 Recombination protein O N terminal JKJ11_02300 PF02565 Recombination protein O C terminal JKJ11_02305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JKJ11_02310 PF01648 4'-phosphopantetheinyl transferase superfamily JKJ11_02315 PF00672 HAMP domain JKJ11_02315 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_02315 PF01627 Hpt domain JKJ11_02315 PF00072 Response regulator receiver domain JKJ11_02315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_02320 PF05958 tRNA (Uracil-5-)-methyltransferase JKJ11_02320 PF01938 TRAM domain JKJ11_02325 PF04607 Region found in RelA / SpoT proteins JKJ11_02325 PF02824 TGS domain JKJ11_02325 PF13291 ACT domain JKJ11_02330 PF03819 MazG nucleotide pyrophosphohydrolase domain JKJ11_02335 PF00117 Glutamine amidotransferase class-I JKJ11_02335 PF06418 CTP synthase N-terminus JKJ11_02340 PF00113 Enolase, C-terminal TIM barrel domain JKJ11_02340 PF03952 Enolase, N-terminal domain JKJ11_02350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JKJ11_02350 PF12833 Helix-turn-helix domain JKJ11_02355 PF00491 Arginase family JKJ11_02360 PF02595 Glycerate kinase family JKJ11_02365 PF02447 GntP family permease JKJ11_02370 PF13556 PucR C-terminal helix-turn-helix domain JKJ11_02370 PF17853 GGDEF-like domain JKJ11_02370 PF05651 Putative sugar diacid recognition JKJ11_02375 PF06062 Uncharacterised protein family (UPF0231) JKJ11_02380 PF00543 Nitrogen regulatory protein P-II JKJ11_02385 PF00909 Ammonium Transporter Family JKJ11_02390 PF13416 Bacterial extracellular solute-binding protein JKJ11_02400 PF08402 TOBE domain JKJ11_02400 PF00005 ABC transporter JKJ11_02405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JKJ11_02405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JKJ11_02405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JKJ11_02405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JKJ11_02410 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JKJ11_02410 PF06165 Glycosyltransferase family 36 JKJ11_02415 PF00728 Glycosyl hydrolase family 20, catalytic domain JKJ11_02415 PF02838 Glycosyl hydrolase family 20, domain 2 JKJ11_02420 PF01869 BadF/BadG/BcrA/BcrD ATPase family JKJ11_02430 PF00005 ABC transporter JKJ11_02430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_02435 PF00005 ABC transporter JKJ11_02435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_02440 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_02440 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_02445 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_02450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_02465 PF04545 Sigma-70, region 4 JKJ11_02465 PF00140 Sigma-70 factor, region 1.2 JKJ11_02465 PF04539 Sigma-70 region 3 JKJ11_02465 PF04542 Sigma-70 region 2 JKJ11_02465 PF04546 Sigma-70, non-essential region JKJ11_02465 PF03979 Sigma-70 factor, region 1.1 JKJ11_02470 PF10410 DnaB-helicase binding domain of primase JKJ11_02470 PF01807 CHC2 zinc finger JKJ11_02470 PF08275 DNA primase catalytic core, N-terminal domain JKJ11_02470 PF08278 DNA primase DnaG DnaB-binding JKJ11_02475 PF09424 Yqey-like protein JKJ11_02480 PF01165 Ribosomal protein S21 JKJ11_02485 PF00814 Glycoprotease family JKJ11_02490 PF00561 alpha/beta hydrolase fold JKJ11_02495 PF02660 Glycerol-3-phosphate acyltransferase JKJ11_02500 PF02152 Dihydroneopterin aldolase JKJ11_02505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JKJ11_02510 PF02673 Bacitracin resistance protein BacA JKJ11_02515 PF12627 Probable RNA and SrmB- binding site of polymerase A JKJ11_02515 PF01743 Poly A polymerase head domain JKJ11_02515 PF01966 HD domain JKJ11_02520 PF01471 Putative peptidoglycan binding domain JKJ11_02520 PF13401 AAA domain JKJ11_02535 PF00005 ABC transporter JKJ11_02535 PF17755 UvrA DNA-binding domain JKJ11_02535 PF17760 UvrA interaction domain JKJ11_02540 PF00483 Nucleotidyl transferase JKJ11_02545 PF00196 Bacterial regulatory proteins, luxR family JKJ11_02550 PF00436 Single-strand binding protein family JKJ11_02555 PF17157 Gammaproteobacterial periplasmic sensor domain JKJ11_02555 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_02555 PF00563 EAL domain JKJ11_02575 PF07660 Secretin and TonB N terminus short domain JKJ11_02575 PF03958 Bacterial type II/III secretion system short domain JKJ11_02575 PF00263 Bacterial type II and III secretion system protein JKJ11_02575 PF11741 AMIN domain JKJ11_02580 PF13401 AAA domain JKJ11_02580 PF01471 Putative peptidoglycan binding domain JKJ11_02590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JKJ11_02590 PF00437 Type II/IV secretion system protein JKJ11_02595 PF00482 Type II secretion system (T2SS), protein F JKJ11_02605 PF07963 Prokaryotic N-terminal methylation motif JKJ11_02610 PF07963 Prokaryotic N-terminal methylation motif JKJ11_02645 PF04085 rod shape-determining protein MreC JKJ11_02650 PF04093 rod shape-determining protein MreD JKJ11_02655 PF02545 Maf-like protein JKJ11_02660 PF10150 Ribonuclease E/G family JKJ11_02660 PF00575 S1 RNA binding domain JKJ11_02665 PF13116 Protein of unknown function JKJ11_02665 PF13502 AsmA-like C-terminal region JKJ11_02670 PF00795 Carbon-nitrogen hydrolase JKJ11_02675 PF01523 Putative modulator of DNA gyrase JKJ11_02680 PF02562 PhoH-like protein JKJ11_02680 PF13638 PIN domain JKJ11_02685 PF18337 RapA N-terminal Tudor like domain JKJ11_02685 PF00271 Helicase conserved C-terminal domain JKJ11_02685 PF12137 RNA polymerase recycling family C-terminal JKJ11_02685 PF00176 SNF2 family N-terminal domain JKJ11_02685 PF18339 RapA N-terminal Tudor like domain 1 JKJ11_02690 PF00849 RNA pseudouridylate synthase JKJ11_02695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JKJ11_02695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_02700 PF00582 Universal stress protein family JKJ11_02710 PF16868 NMT1-like family JKJ11_02715 PF01316 Arginine repressor, DNA binding domain JKJ11_02715 PF02863 Arginine repressor, C-terminal domain JKJ11_02720 PF00056 lactate/malate dehydrogenase, NAD binding domain JKJ11_02720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JKJ11_02730 PF00348 Polyprenyl synthetase JKJ11_02735 PF00829 Ribosomal prokaryotic L21 protein JKJ11_02740 PF01016 Ribosomal L27 protein JKJ11_02745 PF01018 GTP1/OBG JKJ11_02745 PF01926 50S ribosome-binding GTPase JKJ11_02750 PF04632 Fusaric acid resistance protein family JKJ11_02755 PF06738 Putative threonine/serine exporter JKJ11_02760 PF12821 Threonine/Serine exporter, ThrE JKJ11_02765 PF00186 Dihydrofolate reductase JKJ11_02770 PF00149 Calcineurin-like phosphoesterase JKJ11_02775 PF04379 ApaG domain JKJ11_02780 PF00398 Ribosomal RNA adenine dimethylase JKJ11_02785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JKJ11_02790 PF00639 PPIC-type PPIASE domain JKJ11_02790 PF09312 SurA N-terminal domain JKJ11_02795 PF03968 OstA-like protein JKJ11_02795 PF04453 LPS transport system D JKJ11_02800 PF00226 DnaJ domain JKJ11_02800 PF05099 Tellurite resistance protein TerB JKJ11_02815 PF00694 Aconitase C-terminal domain JKJ11_02820 PF00330 Aconitase family (aconitate hydratase) JKJ11_02825 PF00180 Isocitrate/isopropylmalate dehydrogenase JKJ11_02830 PF00682 HMGL-like JKJ11_02830 PF08502 LeuA allosteric (dimerisation) domain JKJ11_02845 PF00873 AcrB/AcrD/AcrF family JKJ11_02850 PF01569 PAP2 superfamily JKJ11_02860 PF03466 LysR substrate binding domain JKJ11_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_02865 PF00501 AMP-binding enzyme JKJ11_02870 PF08525 Opacity-associated protein A N-terminal motif JKJ11_02870 PF01551 Peptidase family M23 JKJ11_02870 PF01476 LysM domain JKJ11_02875 PF00579 tRNA synthetases class I (W and Y) JKJ11_02875 PF01479 S4 domain JKJ11_02880 PF01228 Glycine radical JKJ11_02885 PF01261 Xylose isomerase-like TIM barrel JKJ11_02890 PF03167 Uracil DNA glycosylase superfamily JKJ11_02905 PF03544 Gram-negative bacterial TonB protein C-terminal JKJ11_02910 PF02472 Biopolymer transport protein ExbD/TolR JKJ11_02915 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_02920 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_02935 PF07715 TonB-dependent Receptor Plug Domain JKJ11_02935 PF00593 TonB dependent receptor JKJ11_02940 PF12833 Helix-turn-helix domain JKJ11_02950 PF01235 Sodium:alanine symporter family JKJ11_02955 PF03883 Peroxide stress protein YaaA JKJ11_02960 PF00270 DEAD/DEAH box helicase JKJ11_02960 PF00271 Helicase conserved C-terminal domain JKJ11_02965 PF05175 Methyltransferase small domain JKJ11_02970 PF05525 Branched-chain amino acid transport protein JKJ11_02975 PF00258 Flavodoxin JKJ11_02980 PF02899 Phage integrase, N-terminal SAM-like domain JKJ11_02980 PF00589 Phage integrase family JKJ11_02985 PF10411 Disulfide bond isomerase protein N-terminus JKJ11_02985 PF13098 Thioredoxin-like domain JKJ11_02990 PF17768 RecJ OB domain JKJ11_02990 PF01368 DHH family JKJ11_02990 PF02272 DHHA1 domain JKJ11_03000 PF00152 tRNA synthetases class II (D, K and N) JKJ11_03000 PF01336 OB-fold nucleic acid binding domain JKJ11_03005 PF02954 Bacterial regulatory protein, Fis family JKJ11_03005 PF00158 Sigma-54 interaction domain JKJ11_03005 PF00072 Response regulator receiver domain JKJ11_03015 PF00248 Aldo/keto reductase family JKJ11_03025 PF02976 DNA mismatch repair enzyme MutH JKJ11_03030 PF00293 NUDIX domain JKJ11_03035 PF01590 GAF domain JKJ11_03035 PF05524 PEP-utilising enzyme, N-terminal JKJ11_03035 PF00391 PEP-utilising enzyme, mobile domain JKJ11_03035 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_03040 PF01925 Sulfite exporter TauE/SafE JKJ11_03045 PF01790 Prolipoprotein diacylglyceryl transferase JKJ11_03050 PF00303 Thymidylate synthase JKJ11_03065 PF03843 Outer membrane lipoprotein Slp family JKJ11_03070 PF02690 Na+/Pi-cotransporter JKJ11_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_03075 PF03466 LysR substrate binding domain JKJ11_03080 PF01022 Bacterial regulatory protein, arsR family JKJ11_03085 PF01649 Ribosomal protein S20 JKJ11_03090 PF03023 Lipid II flippase MurJ JKJ11_03095 PF06574 FAD synthetase JKJ11_03095 PF01687 Riboflavin kinase JKJ11_03100 PF08264 Anticodon-binding domain of tRNA JKJ11_03100 PF06827 Zinc finger found in FPG and IleRS JKJ11_03100 PF00133 tRNA synthetases class I (I, L, M and V) JKJ11_03105 PF01252 Signal peptidase (SPase) II JKJ11_03110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_03115 PF02401 LytB protein JKJ11_03125 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JKJ11_03130 PF03449 Transcription elongation factor, N-terminal JKJ11_03130 PF01272 Transcription elongation factor, GreA/GreB, C-term JKJ11_03135 PF01985 CRS1 / YhbY (CRM) domain JKJ11_03140 PF01728 FtsJ-like methyltransferase JKJ11_03145 PF17862 AAA+ lid domain JKJ11_03145 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_03145 PF06480 FtsH Extracellular JKJ11_03145 PF01434 Peptidase family M41 JKJ11_03150 PF00809 Pterin binding enzyme JKJ11_03155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JKJ11_03155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JKJ11_03155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JKJ11_03155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JKJ11_03160 PF03840 Preprotein translocase SecG subunit JKJ11_03175 PF17384 RimP C-terminal SH3 domain JKJ11_03175 PF02576 RimP N-terminal domain JKJ11_03180 PF00575 S1 RNA binding domain JKJ11_03180 PF08529 NusA N-terminal domain JKJ11_03180 PF13184 NusA-like KH domain JKJ11_03185 PF04760 Translation initiation factor IF-2, N-terminal region JKJ11_03185 PF08364 Bacterial translation initiation factor IF-2 associated region JKJ11_03185 PF11987 Translation-initiation factor 2 JKJ11_03185 PF00009 Elongation factor Tu GTP binding domain JKJ11_03190 PF02033 Ribosome-binding factor A JKJ11_03195 PF01509 TruB family pseudouridylate synthase (N terminal domain) JKJ11_03195 PF16198 tRNA pseudouridylate synthase B C-terminal domain JKJ11_03195 PF09157 Pseudouridine synthase II TruB, C-terminal JKJ11_03200 PF00312 Ribosomal protein S15 JKJ11_03205 PF00013 KH domain JKJ11_03205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JKJ11_03205 PF00575 S1 RNA binding domain JKJ11_03205 PF03725 3' exoribonuclease family, domain 2 JKJ11_03205 PF01138 3' exoribonuclease family, domain 1 JKJ11_03210 PF13181 Tetratricopeptide repeat JKJ11_03210 PF07719 Tetratricopeptide repeat JKJ11_03220 PF01554 MatE JKJ11_03225 PF01136 Peptidase family U32 JKJ11_03230 PF01136 Peptidase family U32 JKJ11_03235 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_03235 PF00563 EAL domain JKJ11_03235 PF03707 Bacterial signalling protein N terminal repeat JKJ11_03240 PF02036 SCP-2 sterol transfer family JKJ11_03245 PF13508 Acetyltransferase (GNAT) domain JKJ11_03255 PF00583 Acetyltransferase (GNAT) family JKJ11_03290 PF16658 Class II release factor RF3, C-terminal domain JKJ11_03290 PF00009 Elongation factor Tu GTP binding domain JKJ11_03290 PF03144 Elongation factor Tu domain 2 JKJ11_03295 PF02653 Branched-chain amino acid transport system / permease component JKJ11_03300 PF02653 Branched-chain amino acid transport system / permease component JKJ11_03305 PF00005 ABC transporter JKJ11_03310 PF02608 ABC transporter substrate-binding protein PnrA-like JKJ11_03320 PF01026 TatD related DNase JKJ11_03325 PF07670 Nucleoside recognition JKJ11_03325 PF07662 Na+ dependent nucleoside transporter C-terminus JKJ11_03325 PF01773 Na+ dependent nucleoside transporter N-terminus JKJ11_03330 PF01791 DeoC/LacD family aldolase JKJ11_03335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JKJ11_03335 PF02885 Glycosyl transferase family, helical bundle domain JKJ11_03335 PF00591 Glycosyl transferase family, a/b domain JKJ11_03340 PF01676 Metalloenzyme superfamily JKJ11_03345 PF01048 Phosphorylase superfamily JKJ11_03355 PF18429 Domain of unknown function (DUF5609) JKJ11_03365 PF18073 Rubredoxin metal binding domain JKJ11_03370 PF14492 Elongation Factor G, domain II JKJ11_03370 PF03144 Elongation factor Tu domain 2 JKJ11_03370 PF00009 Elongation factor Tu GTP binding domain JKJ11_03370 PF03764 Elongation factor G, domain IV JKJ11_03370 PF00679 Elongation factor G C-terminus JKJ11_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_03375 PF03466 LysR substrate binding domain JKJ11_03380 PF06568 Domain of unknown function (DUF1127) JKJ11_03385 PF00501 AMP-binding enzyme JKJ11_03390 PF00072 Response regulator receiver domain JKJ11_03395 PF02417 Chromate transporter JKJ11_03400 PF03466 LysR substrate binding domain JKJ11_03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_03405 PF13416 Bacterial extracellular solute-binding protein JKJ11_03410 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_03415 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_03420 PF02929 Beta galactosidase small chain JKJ11_03420 PF16353 Domain of unknown function(DUF4981) JKJ11_03420 PF00703 Glycosyl hydrolases family 2 JKJ11_03420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JKJ11_03420 PF02837 Glycosyl hydrolases family 2, sugar binding domain JKJ11_03425 PF00005 ABC transporter JKJ11_03425 PF17912 MalK OB fold domain JKJ11_03430 PF01554 MatE JKJ11_03435 PF13407 Periplasmic binding protein domain JKJ11_03440 PF00005 ABC transporter JKJ11_03445 PF02653 Branched-chain amino acid transport system / permease component JKJ11_03450 PF16363 GDP-mannose 4,6 dehydratase JKJ11_03455 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JKJ11_03455 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JKJ11_03460 PF10509 Galactokinase galactose-binding signature JKJ11_03460 PF08544 GHMP kinases C terminal JKJ11_03460 PF00288 GHMP kinases N terminal domain JKJ11_03465 PF01263 Aldose 1-epimerase JKJ11_03470 PF00356 Bacterial regulatory proteins, lacI family JKJ11_03485 PF00356 Bacterial regulatory proteins, lacI family JKJ11_03490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_03490 PF02378 Phosphotransferase system, EIIC JKJ11_03490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_03495 PF12833 Helix-turn-helix domain JKJ11_03505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_03515 PF00733 Asparagine synthase JKJ11_03515 PF13537 Glutamine amidotransferase domain JKJ11_03520 PF00999 Sodium/hydrogen exchanger family JKJ11_03520 PF02254 TrkA-N domain JKJ11_03525 PF00480 ROK family JKJ11_03525 PF01047 MarR family JKJ11_03530 PF01979 Amidohydrolase family JKJ11_03535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JKJ11_03535 PF00367 phosphotransferase system, EIIB JKJ11_03535 PF02378 Phosphotransferase system, EIIC JKJ11_03540 PF00749 tRNA synthetases class I (E and Q), catalytic domain JKJ11_03540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JKJ11_03545 PF01475 Ferric uptake regulator family JKJ11_03550 PF01118 Semialdehyde dehydrogenase, NAD binding domain JKJ11_03550 PF02774 Semialdehyde dehydrogenase, dimerisation domain JKJ11_03560 PF00258 Flavodoxin JKJ11_03570 PF12697 Alpha/beta hydrolase family JKJ11_03575 PF03925 SeqA protein C-terminal domain JKJ11_03575 PF17206 SeqA protein N-terminal domain JKJ11_03580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JKJ11_03580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JKJ11_03580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JKJ11_03580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JKJ11_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_03585 PF03466 LysR substrate binding domain JKJ11_03595 PF04241 Protein of unknown function (DUF423) JKJ11_03600 PF18125 RlmM ferredoxin-like domain JKJ11_03600 PF01728 FtsJ-like methyltransferase JKJ11_03605 PF01367 5'-3' exonuclease, C-terminal SAM fold JKJ11_03605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JKJ11_03610 PF11892 Domain of unknown function (DUF3412) JKJ11_03610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JKJ11_03610 PF03641 Possible lysine decarboxylase JKJ11_03615 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_03625 PF14489 QueF-like protein JKJ11_03625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JKJ11_03630 PF07348 Syd protein (SUKH-2) JKJ11_03635 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JKJ11_03640 PF03180 NLPA lipoprotein JKJ11_03645 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_03650 PF09383 NIL domain JKJ11_03650 PF00005 ABC transporter JKJ11_03665 PF00356 Bacterial regulatory proteins, lacI family JKJ11_03670 PF02378 Phosphotransferase system, EIIC JKJ11_03670 PF00367 phosphotransferase system, EIIB JKJ11_03675 PF00128 Alpha amylase, catalytic domain JKJ11_03675 PF16657 Maltogenic Amylase, C-terminal domain JKJ11_03685 PF00464 Serine hydroxymethyltransferase JKJ11_03695 PF04055 Radical SAM superfamily JKJ11_03695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JKJ11_03700 PF03099 Biotin/lipoate A/B protein ligase family JKJ11_03705 PF04359 Protein of unknown function (DUF493) JKJ11_03710 PF00768 D-alanyl-D-alanine carboxypeptidase JKJ11_03710 PF07943 Penicillin-binding protein 5, C-terminal domain JKJ11_03715 PF05036 Sporulation related domain JKJ11_03715 PF03330 Lytic transglycolase JKJ11_03720 PF01098 Cell cycle protein JKJ11_03725 PF00905 Penicillin binding protein transpeptidase domain JKJ11_03725 PF03717 Penicillin-binding Protein dimerisation domain JKJ11_03730 PF02590 Predicted SPOUT methyltransferase JKJ11_03740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JKJ11_03740 PF06144 DNA polymerase III, delta subunit JKJ11_03745 PF04390 Lipopolysaccharide-assembly JKJ11_03750 PF08264 Anticodon-binding domain of tRNA JKJ11_03750 PF00133 tRNA synthetases class I (I, L, M and V) JKJ11_03750 PF13603 Leucyl-tRNA synthetase, Domain 2 JKJ11_03755 PF07295 Zinc-ribbon containing domain JKJ11_03765 PF04354 ZipA, C-terminal FtsZ-binding domain JKJ11_03770 PF12826 Helix-hairpin-helix motif JKJ11_03770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JKJ11_03770 PF03120 NAD-dependent DNA ligase OB-fold domain JKJ11_03770 PF01653 NAD-dependent DNA ligase adenylation domain JKJ11_03770 PF00533 BRCA1 C Terminus (BRCT) domain JKJ11_03775 PF13609 Gram-negative porin JKJ11_03780 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JKJ11_03785 PF13411 MerR HTH family regulatory protein JKJ11_03820 PF00403 Heavy-metal-associated domain JKJ11_03825 PF00749 tRNA synthetases class I (E and Q), catalytic domain JKJ11_03830 PF02779 Transketolase, pyrimidine binding domain JKJ11_03830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JKJ11_03830 PF02780 Transketolase, C-terminal domain JKJ11_03835 PF00348 Polyprenyl synthetase JKJ11_03840 PF02609 Exonuclease VII small subunit JKJ11_03845 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_03850 PF00691 OmpA family JKJ11_03850 PF13677 Membrane MotB of proton-channel complex MotA/MotB JKJ11_03855 PF02926 THUMP domain JKJ11_03855 PF02568 Thiamine biosynthesis protein (ThiI) JKJ11_03865 PF01784 NIF3 (NGG1p interacting factor 3) JKJ11_03870 PF00285 Citrate synthase, C-terminal domain JKJ11_03875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JKJ11_03880 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JKJ11_03885 PF02910 Fumarate reductase flavoprotein C-term JKJ11_03885 PF00890 FAD binding domain JKJ11_03890 PF13085 2Fe-2S iron-sulfur cluster binding domain JKJ11_03895 PF00676 Dehydrogenase E1 component JKJ11_03895 PF16870 2-oxoglutarate dehydrogenase C-terminal JKJ11_03895 PF02779 Transketolase, pyrimidine binding domain JKJ11_03895 PF16078 2-oxoglutarate dehydrogenase N-terminus JKJ11_03900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JKJ11_03900 PF00364 Biotin-requiring enzyme JKJ11_03900 PF02817 e3 binding domain JKJ11_03905 PF08442 ATP-grasp domain JKJ11_03905 PF00549 CoA-ligase JKJ11_03910 PF02629 CoA binding domain JKJ11_03910 PF00549 CoA-ligase JKJ11_03915 PF00950 ABC 3 transport family JKJ11_03920 PF00005 ABC transporter JKJ11_03925 PF01297 Zinc-uptake complex component A periplasmic JKJ11_03930 PF12833 Helix-turn-helix domain JKJ11_03940 PF02682 Carboxyltransferase domain, subdomain C and D JKJ11_03945 PF03746 LamB/YcsF family JKJ11_03950 PF04023 FeoA domain JKJ11_03955 PF07664 Ferrous iron transport protein B C terminus JKJ11_03955 PF02421 Ferrous iron transport protein B JKJ11_03955 PF07670 Nucleoside recognition JKJ11_03975 PF00750 tRNA synthetases class I (R) JKJ11_03975 PF05746 DALR anticodon binding domain JKJ11_03975 PF03485 Arginyl tRNA synthetase N terminal domain JKJ11_03985 PF06185 YecM protein JKJ11_03995 PF01842 ACT domain JKJ11_03995 PF00551 Formyl transferase JKJ11_04005 PF04851 Type III restriction enzyme, res subunit JKJ11_04005 PF13307 Helicase C-terminal domain JKJ11_04010 PF00814 Glycoprotease family JKJ11_04030 PF13193 AMP-binding enzyme C-terminal domain JKJ11_04030 PF00501 AMP-binding enzyme JKJ11_04035 PF00570 HRDC domain JKJ11_04035 PF01612 3'-5' exonuclease JKJ11_04040 PF03776 Septum formation topological specificity factor MinE JKJ11_04045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JKJ11_04050 PF05209 Septum formation inhibitor MinC, N-terminal domain JKJ11_04050 PF03775 Septum formation inhibitor MinC, C-terminal domain JKJ11_04055 PF05166 YcgL domain JKJ11_04060 PF13406 Transglycosylase SLT domain JKJ11_04065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JKJ11_04065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JKJ11_04095 PF00271 Helicase conserved C-terminal domain JKJ11_04095 PF00270 DEAD/DEAH box helicase JKJ11_04110 PF16200 C-terminal region of band_7 JKJ11_04110 PF01145 SPFH domain / Band 7 family JKJ11_04115 PF00085 Thioredoxin JKJ11_04125 PF00106 short chain dehydrogenase JKJ11_04130 PF01370 NAD dependent epimerase/dehydratase family JKJ11_04130 PF08338 Domain of unknown function (DUF1731) JKJ11_04135 PF07556 Protein of unknown function (DUF1538) JKJ11_04140 PF07556 Protein of unknown function (DUF1538) JKJ11_04155 PF12850 Calcineurin-like phosphoesterase superfamily domain JKJ11_04160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JKJ11_04165 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_04165 PF00391 PEP-utilising enzyme, mobile domain JKJ11_04165 PF05524 PEP-utilising enzyme, N-terminal JKJ11_04170 PF00381 PTS HPr component phosphorylation site JKJ11_04175 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_04180 PF00795 Carbon-nitrogen hydrolase JKJ11_04185 PF00571 CBS domain JKJ11_04185 PF03471 Transporter associated domain JKJ11_04190 PF02130 Uncharacterized protein family UPF0054 JKJ11_04195 PF02562 PhoH-like protein JKJ11_04200 PF01938 TRAM domain JKJ11_04200 PF00919 Uncharacterized protein family UPF0004 JKJ11_04200 PF04055 Radical SAM superfamily JKJ11_04205 PF01494 FAD binding domain JKJ11_04210 PF10282 Lactonase, 7-bladed beta-propeller JKJ11_04310 PF06071 Protein of unknown function (DUF933) JKJ11_04310 PF01926 50S ribosome-binding GTPase JKJ11_04315 PF01195 Peptidyl-tRNA hydrolase JKJ11_04320 PF14572 Phosphoribosyl synthetase-associated domain JKJ11_04320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JKJ11_04325 PF08544 GHMP kinases C terminal JKJ11_04325 PF00288 GHMP kinases N terminal domain JKJ11_04330 PF03550 Outer membrane lipoprotein LolB JKJ11_04335 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JKJ11_04335 PF01488 Shikimate / quinate 5-dehydrogenase JKJ11_04335 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JKJ11_04340 PF03462 PCRF domain JKJ11_04340 PF00472 RF-1 domain JKJ11_04345 PF13847 Methyltransferase domain JKJ11_04345 PF17827 PrmC N-terminal domain JKJ11_04350 PF04247 Invasion gene expression up-regulator, SirB JKJ11_04355 PF13369 Transglutaminase-like superfamily JKJ11_04360 PF00793 DAHP synthetase I family JKJ11_04365 PF00149 Calcineurin-like phosphoesterase JKJ11_04365 PF02872 5'-nucleotidase, C-terminal domain JKJ11_04370 PF04073 Aminoacyl-tRNA editing domain JKJ11_04375 PF00849 RNA pseudouridylate synthase JKJ11_04375 PF01479 S4 domain JKJ11_04380 PF01713 Smr domain JKJ11_04400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_04400 PF00384 Molybdopterin oxidoreductase JKJ11_04400 PF01568 Molydopterin dinucleotide binding domain JKJ11_04405 PF01312 FlhB HrpN YscU SpaS Family JKJ11_04410 PF01311 Bacterial export proteins, family 1 JKJ11_04415 PF01313 Bacterial export proteins, family 3 JKJ11_04420 PF00813 FliP family JKJ11_04425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JKJ11_04435 PF00460 Flagella basal body rod protein JKJ11_04440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_04440 PF00460 Flagella basal body rod protein JKJ11_04445 PF03963 Flagellar hook capping protein - N-terminal region JKJ11_04445 PF13860 FlgD Ig-like domain JKJ11_04445 PF13861 FlgD Tudor-like domain JKJ11_04450 PF07559 Flagellar basal body protein FlaE JKJ11_04450 PF00460 Flagella basal body rod protein JKJ11_04450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_04455 PF00460 Flagella basal body rod protein JKJ11_04455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_04460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_04460 PF00460 Flagella basal body rod protein JKJ11_04465 PF02107 Flagellar L-ring protein JKJ11_04470 PF02119 Flagellar P-ring protein JKJ11_04475 PF10135 Rod binding protein JKJ11_04475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JKJ11_04480 PF00460 Flagella basal body rod protein JKJ11_04480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_04490 PF00691 OmpA family JKJ11_04495 PF02049 Flagellar hook-basal body complex protein FliE JKJ11_04500 PF08345 Flagellar M-ring protein C-terminal JKJ11_04500 PF01514 Secretory protein of YscJ/FliF family JKJ11_04505 PF14842 FliG N-terminal domain JKJ11_04505 PF14841 FliG middle domain JKJ11_04505 PF01706 FliG C-terminal domain JKJ11_04530 PF01323 DSBA-like thioredoxin domain JKJ11_04545 PF00771 FHIPEP family JKJ11_04550 PF00669 Bacterial flagellin N-terminal helical region JKJ11_04550 PF00700 Bacterial flagellin C-terminal helical region JKJ11_04555 PF02465 Flagellar hook-associated protein 2 N-terminus JKJ11_04555 PF07195 Flagellar hook-associated protein 2 C-terminus JKJ11_04555 PF07196 Flagellin hook IN motif JKJ11_04580 PF04542 Sigma-70 region 2 JKJ11_04580 PF04545 Sigma-70, region 4 JKJ11_04585 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_04590 PF13677 Membrane MotB of proton-channel complex MotA/MotB JKJ11_04590 PF00691 OmpA family JKJ11_04600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JKJ11_04605 PF00486 Transcriptional regulatory protein, C terminal JKJ11_04605 PF00072 Response regulator receiver domain JKJ11_04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_04610 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_04610 PF00672 HAMP domain JKJ11_04615 PF01547 Bacterial extracellular solute-binding protein JKJ11_04620 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_04625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_04630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_04640 PF02954 Bacterial regulatory protein, Fis family JKJ11_04640 PF00158 Sigma-54 interaction domain JKJ11_04640 PF00072 Response regulator receiver domain JKJ11_04645 PF02743 Cache domain JKJ11_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_04645 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_04650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_04650 PF05698 Bacterial trigger factor protein (TF) C-terminus JKJ11_04650 PF05697 Bacterial trigger factor protein (TF) JKJ11_04655 PF00574 Clp protease JKJ11_04660 PF06689 ClpX C4-type zinc finger JKJ11_04660 PF10431 C-terminal, D2-small domain, of ClpB protein JKJ11_04660 PF07724 AAA domain (Cdc48 subfamily) JKJ11_04665 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_04665 PF05362 Lon protease (S16) C-terminal proteolytic domain JKJ11_04665 PF02190 ATP-dependent protease La (LON) substrate-binding domain JKJ11_04670 PF00216 Bacterial DNA-binding protein JKJ11_04675 PF13145 PPIC-type PPIASE domain JKJ11_04695 PF01966 HD domain JKJ11_04695 PF13286 Phosphohydrolase-associated domain JKJ11_04705 PF00155 Aminotransferase class I and II JKJ11_04710 PF00425 chorismate binding enzyme JKJ11_04715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_04715 PF16582 Middle domain of thiamine pyrophosphate JKJ11_04715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_04720 PF12697 Alpha/beta hydrolase family JKJ11_04725 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_04730 PF13378 Enolase C-terminal domain-like JKJ11_04735 PF13193 AMP-binding enzyme C-terminal domain JKJ11_04735 PF00501 AMP-binding enzyme JKJ11_04745 PF03601 Conserved hypothetical protein 698 JKJ11_04750 PF07690 Major Facilitator Superfamily JKJ11_04795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_04800 PF00873 AcrB/AcrD/AcrF family JKJ11_04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_04810 PF00672 HAMP domain JKJ11_04810 PF17202 Single cache domain 3 JKJ11_04815 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_04820 PF01037 Lrp/AsnC ligand binding domain JKJ11_04820 PF13404 AsnC-type helix-turn-helix domain JKJ11_04825 PF00465 Iron-containing alcohol dehydrogenase JKJ11_04830 PF00171 Aldehyde dehydrogenase family JKJ11_04840 PF09619 Type III secretion system lipoprotein chaperone (YscW) JKJ11_04845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JKJ11_04860 PF00465 Iron-containing alcohol dehydrogenase JKJ11_04865 PF00596 Class II Aldolase and Adducin N-terminal domain JKJ11_04870 PF06134 L-rhamnose isomerase (RhaA) JKJ11_04875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_04880 PF05336 L-rhamnose mutarotase JKJ11_04890 PF12833 Helix-turn-helix domain JKJ11_04890 PF02311 AraC-like ligand binding domain JKJ11_04920 PF00873 AcrB/AcrD/AcrF family JKJ11_04930 PF01042 Endoribonuclease L-PSP JKJ11_04935 PF00282 Pyridoxal-dependent decarboxylase conserved domain JKJ11_04940 PF06826 Predicted Permease Membrane Region JKJ11_04945 PF00672 HAMP domain JKJ11_04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_04950 PF00271 Helicase conserved C-terminal domain JKJ11_04950 PF00270 DEAD/DEAH box helicase JKJ11_04985 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JKJ11_04985 PF00175 Oxidoreductase NAD-binding domain JKJ11_04990 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JKJ11_04990 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JKJ11_05000 PF00270 DEAD/DEAH box helicase JKJ11_05000 PF00271 Helicase conserved C-terminal domain JKJ11_05005 PF01554 MatE JKJ11_05010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JKJ11_05010 PF13378 Enolase C-terminal domain-like JKJ11_05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_05020 PF03466 LysR substrate binding domain JKJ11_05025 PF01219 Prokaryotic diacylglycerol kinase JKJ11_05035 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_05035 PF17158 Membrane-associated sensor, integral membrane domain JKJ11_05040 PF00356 Bacterial regulatory proteins, lacI family JKJ11_05045 PF01266 FAD dependent oxidoreductase JKJ11_05045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JKJ11_05050 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_05050 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_05055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_05055 PF11890 Domain of unknown function (DUF3410) JKJ11_05055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JKJ11_05060 PF01118 Semialdehyde dehydrogenase, NAD binding domain JKJ11_05060 PF02774 Semialdehyde dehydrogenase, dimerisation domain JKJ11_05070 PF01416 tRNA pseudouridine synthase JKJ11_05075 PF01039 Carboxyl transferase domain JKJ11_05075 PF17848 Acetyl-coA carboxylase zinc finger domain JKJ11_05080 PF02875 Mur ligase family, glutamate ligase domain JKJ11_05080 PF08245 Mur ligase middle domain JKJ11_05085 PF05036 Sporulation related domain JKJ11_05090 PF02674 Colicin V production protein JKJ11_05095 PF00156 Phosphoribosyl transferase domain JKJ11_05100 PF03466 LysR substrate binding domain JKJ11_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_05105 PF00072 Response regulator receiver domain JKJ11_05115 PF00156 Phosphoribosyl transferase domain JKJ11_05120 PF12169 DNA polymerase III subunits gamma and tau domain III JKJ11_05120 PF12170 DNA polymerase III tau subunit V interacting with alpha JKJ11_05125 PF02575 YbaB/EbfC DNA-binding family JKJ11_05130 PF02132 RecR protein JKJ11_05130 PF13662 Toprim domain JKJ11_05135 PF00230 Major intrinsic protein JKJ11_05140 PF03692 Putative zinc- or iron-chelating domain JKJ11_05145 PF03692 Putative zinc- or iron-chelating domain JKJ11_05170 PF02899 Phage integrase, N-terminal SAM-like domain JKJ11_05170 PF00589 Phage integrase family JKJ11_05175 PF06114 IrrE N-terminal-like domain JKJ11_05185 PF12161 HsdM N-terminal domain JKJ11_05185 PF02384 N-6 DNA Methylase JKJ11_05190 PF01420 Type I restriction modification DNA specificity domain JKJ11_05200 PF12008 Type I restriction and modification enzyme - subunit R C terminal JKJ11_05200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JKJ11_05200 PF18766 SWI2/SNF2 ATPase JKJ11_05205 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_05220 PF13847 Methyltransferase domain JKJ11_05225 PF01263 Aldose 1-epimerase JKJ11_05230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JKJ11_05230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JKJ11_05235 PF01641 SelR domain JKJ11_05245 PF07023 Protein of unknown function (DUF1315) JKJ11_05250 PF01740 STAS domain JKJ11_05250 PF00916 Sulfate permease family JKJ11_05255 PF12111 Polyribonucleotide phosphorylase C terminal JKJ11_05255 PF10150 Ribonuclease E/G family JKJ11_05255 PF00575 S1 RNA binding domain JKJ11_05260 PF00849 RNA pseudouridylate synthase JKJ11_05260 PF01479 S4 domain JKJ11_05265 PF02545 Maf-like protein JKJ11_05270 PF02620 Large ribosomal RNA subunit accumulation protein YceD JKJ11_05275 PF01783 Ribosomal L32p protein family JKJ11_05280 PF02504 Fatty acid synthesis protein JKJ11_05285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JKJ11_05285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JKJ11_05290 PF00698 Acyl transferase domain JKJ11_05300 PF00550 Phosphopantetheine attachment site JKJ11_05305 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_05305 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_05310 PF01063 Amino-transferase class IV JKJ11_05315 PF02618 YceG-like family JKJ11_05320 PF02223 Thymidylate kinase JKJ11_05325 PF09115 DNA polymerase III, delta subunit, C terminal JKJ11_05330 PF01026 TatD related DNase JKJ11_05335 PF02378 Phosphotransferase system, EIIC JKJ11_05335 PF00367 phosphotransferase system, EIIB JKJ11_05350 PF00209 Sodium:neurotransmitter symporter family JKJ11_05365 PF01734 Patatin-like phospholipase JKJ11_05370 PF00480 ROK family JKJ11_05375 PF01584 CheW-like domain JKJ11_05375 PF00072 Response regulator receiver domain JKJ11_05380 PF07733 Bacterial DNA polymerase III alpha NTPase domain JKJ11_05380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JKJ11_05380 PF14579 Helix-hairpin-helix motif JKJ11_05380 PF02811 PHP domain JKJ11_05380 PF01336 OB-fold nucleic acid binding domain JKJ11_05395 PF01734 Patatin-like phospholipase JKJ11_05400 PF00106 short chain dehydrogenase JKJ11_05405 PF08496 Peptidase family S49 N-terminal JKJ11_05405 PF01343 Peptidase family S49 JKJ11_05410 PF02224 Cytidylate kinase JKJ11_05415 PF00575 S1 RNA binding domain JKJ11_05420 PF00216 Bacterial DNA-binding protein JKJ11_05425 PF06305 Lipopolysaccharide assembly protein A domain JKJ11_05430 PF18073 Rubredoxin metal binding domain JKJ11_05435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JKJ11_05440 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JKJ11_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_05450 PF03466 LysR substrate binding domain JKJ11_05460 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JKJ11_05460 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JKJ11_05465 PF01037 Lrp/AsnC ligand binding domain JKJ11_05470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JKJ11_05470 PF17854 FtsK alpha domain JKJ11_05470 PF09397 Ftsk gamma domain JKJ11_05470 PF01580 FtsK/SpoIIIE family JKJ11_05475 PF03548 Outer membrane lipoprotein carrier protein LolA JKJ11_05480 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_05480 PF16193 AAA C-terminal domain JKJ11_05480 PF12002 MgsA AAA+ ATPase C terminal JKJ11_05485 PF02403 Seryl-tRNA synthetase N-terminal domain JKJ11_05485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JKJ11_05490 PF01258 Prokaryotic dksA/traR C4-type zinc finger JKJ11_05495 PF00202 Aminotransferase class-III JKJ11_05500 PF06968 Biotin and Thiamin Synthesis associated domain JKJ11_05500 PF04055 Radical SAM superfamily JKJ11_05505 PF00155 Aminotransferase class I and II JKJ11_05510 PF08241 Methyltransferase domain JKJ11_05525 PF01435 Peptidase family M48 JKJ11_05570 PF08328 Adenylosuccinate lyase C-terminal JKJ11_05570 PF00206 Lyase JKJ11_05575 PF04356 Protein of unknown function (DUF489) JKJ11_05585 PF00294 pfkB family carbohydrate kinase JKJ11_05590 PF00816 H-NS histone family JKJ11_05595 PF03553 Na+/H+ antiporter family JKJ11_05600 PF01634 ATP phosphoribosyltransferase JKJ11_05600 PF08029 HisG, C-terminal domain JKJ11_05605 PF00815 Histidinol dehydrogenase JKJ11_05610 PF00155 Aminotransferase class I and II JKJ11_05615 PF00475 Imidazoleglycerol-phosphate dehydratase JKJ11_05615 PF08645 Polynucleotide kinase 3 phosphatase JKJ11_05620 PF00117 Glutamine amidotransferase class-I JKJ11_05625 PF00977 Histidine biosynthesis protein JKJ11_05630 PF00977 Histidine biosynthesis protein JKJ11_05635 PF01502 Phosphoribosyl-AMP cyclohydrolase JKJ11_05635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JKJ11_05645 PF00535 Glycosyl transferase family 2 JKJ11_05660 PF04293 SpoVR like protein JKJ11_05665 PF04285 Protein of unknown function (DUF444) JKJ11_05670 PF06798 PrkA serine protein kinase C-terminal domain JKJ11_05670 PF08298 PrkA AAA domain JKJ11_05675 PF03887 YfbU domain JKJ11_05680 PF04055 Radical SAM superfamily JKJ11_05685 PF02743 Cache domain JKJ11_05685 PF00672 HAMP domain JKJ11_05685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_05695 PF01228 Glycine radical JKJ11_05695 PF02901 Pyruvate formate lyase-like JKJ11_05705 PF00005 ABC transporter JKJ11_05710 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_05715 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_05720 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_05725 PF03372 Endonuclease/Exonuclease/phosphatase family JKJ11_05730 PF00672 HAMP domain JKJ11_05730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_05745 PF08443 RimK-like ATP-grasp domain JKJ11_05745 PF18030 RimK PreATP-grasp domain JKJ11_05750 PF08003 Protein of unknown function (DUF1698) JKJ11_05755 PF13649 Methyltransferase domain JKJ11_05760 PF01904 Protein of unknown function DUF72 JKJ11_05765 PF02938 GAD domain JKJ11_05765 PF00152 tRNA synthetases class II (D, K and N) JKJ11_05765 PF01336 OB-fold nucleic acid binding domain JKJ11_05770 PF01797 Transposase IS200 like JKJ11_05775 PF01709 Transcriptional regulator JKJ11_05780 PF02075 Crossover junction endodeoxyribonuclease RuvC JKJ11_05785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_05785 PF17200 Single Cache domain 2 JKJ11_05785 PF00672 HAMP domain JKJ11_05790 PF07499 RuvA, C-terminal domain JKJ11_05790 PF01330 RuvA N terminal domain JKJ11_05795 PF17864 RuvB AAA lid domain JKJ11_05795 PF05491 RuvB C-terminal winged helix domain JKJ11_05795 PF05496 Holliday junction DNA helicase RuvB P-loop domain JKJ11_05800 PF01654 Cytochrome bd terminal oxidase subunit I JKJ11_05805 PF02322 Cytochrome bd terminal oxidase subunit II JKJ11_05810 PF08173 Membrane bound YbgT-like protein JKJ11_05820 PF03061 Thioesterase superfamily JKJ11_05825 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_05830 PF02472 Biopolymer transport protein ExbD/TolR JKJ11_05840 PF04052 TolB amino-terminal domain JKJ11_05840 PF07676 WD40-like Beta Propeller Repeat JKJ11_05845 PF00691 OmpA family JKJ11_05850 PF16331 TolA binding protein trimerisation JKJ11_05850 PF13174 Tetratricopeptide repeat JKJ11_05855 PF02445 Quinolinate synthetase A protein JKJ11_05880 PF00072 Response regulator receiver domain JKJ11_05880 PF09308 LuxQ, periplasmic JKJ11_05880 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_05885 PF06610 L-alanine exporter JKJ11_05930 PF00239 Resolvase, N terminal domain JKJ11_05930 PF02796 Helix-turn-helix domain of resolvase JKJ11_05950 PF18273 Type III R-M EcoP15I C-terminal domain JKJ11_05950 PF01555 DNA methylase JKJ11_05965 PF04851 Type III restriction enzyme, res subunit JKJ11_05965 PF08774 VRR-NUC domain JKJ11_05975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JKJ11_05975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JKJ11_05980 PF00171 Aldehyde dehydrogenase family JKJ11_05985 PF08402 TOBE domain JKJ11_05985 PF00005 ABC transporter JKJ11_05995 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06000 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06005 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JKJ11_06010 PF13407 Periplasmic binding protein domain JKJ11_06010 PF00356 Bacterial regulatory proteins, lacI family JKJ11_06015 PF03932 CutC family JKJ11_06020 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_06025 PF01112 Asparaginase JKJ11_06030 PF00005 ABC transporter JKJ11_06035 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06040 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06045 PF12833 Helix-turn-helix domain JKJ11_06045 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JKJ11_06050 PF00171 Aldehyde dehydrogenase family JKJ11_06055 PF13193 AMP-binding enzyme C-terminal domain JKJ11_06055 PF00501 AMP-binding enzyme JKJ11_06060 PF05199 GMC oxidoreductase JKJ11_06060 PF00732 GMC oxidoreductase JKJ11_06065 PF12697 Alpha/beta hydrolase family JKJ11_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_06075 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_06075 PF02743 Cache domain JKJ11_06080 PF00158 Sigma-54 interaction domain JKJ11_06080 PF00072 Response regulator receiver domain JKJ11_06080 PF02954 Bacterial regulatory protein, Fis family JKJ11_06095 PF00005 ABC transporter JKJ11_06100 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06105 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06115 PF08220 DeoR-like helix-turn-helix domain JKJ11_06115 PF00455 DeoR C terminal sensor domain JKJ11_06120 PF07690 Major Facilitator Superfamily JKJ11_06125 PF07882 L-fucose isomerase, second N-terminal domain JKJ11_06125 PF07881 L-fucose isomerase, first N-terminal domain JKJ11_06125 PF02952 L-fucose isomerase, C-terminal domain JKJ11_06130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_06130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_06135 PF05025 RbsD / FucU transport protein family JKJ11_06140 PF00596 Class II Aldolase and Adducin N-terminal domain JKJ11_06145 PF00465 Iron-containing alcohol dehydrogenase JKJ11_06160 PF00171 Aldehyde dehydrogenase family JKJ11_06170 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_06185 PF14502 Helix-turn-helix domain JKJ11_06185 PF14503 YhfZ C-terminal domain JKJ11_06190 PF02126 Phosphotriesterase family JKJ11_06195 PF10941 Protein of unknown function DUF2620 JKJ11_06200 PF10797 Protein of unknown function JKJ11_06210 PF01168 Alanine racemase, N-terminal domain JKJ11_06215 PF01676 Metalloenzyme superfamily JKJ11_06220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JKJ11_06225 PF09905 DNA-binding protein VF530 JKJ11_06230 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JKJ11_06235 PF13302 Acetyltransferase (GNAT) domain JKJ11_06240 PF00356 Bacterial regulatory proteins, lacI family JKJ11_06245 PF16875 Glycosyl hydrolase family 36 N-terminal domain JKJ11_06245 PF16874 Glycosyl hydrolase family 36 C-terminal domain JKJ11_06260 PF03466 LysR substrate binding domain JKJ11_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_06265 PF08267 Cobalamin-independent synthase, N-terminal domain JKJ11_06265 PF01717 Cobalamin-independent synthase, Catalytic domain JKJ11_06275 PF03795 YCII-related domain JKJ11_06280 PF03061 Thioesterase superfamily JKJ11_06285 PF04279 Intracellular septation protein A JKJ11_06295 PF00375 Sodium:dicarboxylate symporter family JKJ11_06300 PF00290 Tryptophan synthase alpha chain JKJ11_06305 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_06310 PF00218 Indole-3-glycerol phosphate synthase JKJ11_06310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JKJ11_06315 PF02885 Glycosyl transferase family, helical bundle domain JKJ11_06315 PF00591 Glycosyl transferase family, a/b domain JKJ11_06320 PF00117 Glutamine amidotransferase class-I JKJ11_06325 PF00425 chorismate binding enzyme JKJ11_06325 PF04715 Anthranilate synthase component I, N terminal region JKJ11_06330 PF02811 PHP domain JKJ11_06335 PF01300 Telomere recombination JKJ11_06340 PF01479 S4 domain JKJ11_06340 PF00849 RNA pseudouridylate synthase JKJ11_06345 PF00005 ABC transporter JKJ11_06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_06350 PF00005 ABC transporter JKJ11_06355 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06355 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_06360 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_06370 PF02954 Bacterial regulatory protein, Fis family JKJ11_06370 PF00158 Sigma-54 interaction domain JKJ11_06375 PF04012 PspA/IM30 family JKJ11_06380 PF06667 Phage shock protein B JKJ11_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_06390 PF03466 LysR substrate binding domain JKJ11_06395 PF11975 Family 4 glycosyl hydrolase C-terminal domain JKJ11_06395 PF02056 Family 4 glycosyl hydrolase JKJ11_06400 PF04794 YdjC-like protein JKJ11_06410 PF13533 Biotin-lipoyl like JKJ11_06415 PF00873 AcrB/AcrD/AcrF family JKJ11_06420 PF00958 GMP synthase C terminal domain JKJ11_06420 PF00117 Glutamine amidotransferase class-I JKJ11_06420 PF03352 Methyladenine glycosylase JKJ11_06420 PF13302 Acetyltransferase (GNAT) domain JKJ11_06420 PF13673 Acetyltransferase (GNAT) domain JKJ11_06425 PF01557 Fumarylacetoacetate (FAA) hydrolase family JKJ11_06440 PF00171 Aldehyde dehydrogenase family JKJ11_06445 PF00465 Iron-containing alcohol dehydrogenase JKJ11_06460 PF00884 Sulfatase JKJ11_06465 PF13186 Iron-sulfur cluster-binding domain JKJ11_06465 PF04055 Radical SAM superfamily JKJ11_06480 PF00884 Sulfatase JKJ11_06485 PF16925 Tetracyclin repressor-like, C-terminal domain JKJ11_06485 PF00440 Bacterial regulatory proteins, tetR family JKJ11_06490 PF00994 Probable molybdopterin binding domain JKJ11_06505 PF04116 Fatty acid hydroxylase superfamily JKJ11_06515 PF00313 'Cold-shock' DNA-binding domain JKJ11_06520 PF00175 Oxidoreductase NAD-binding domain JKJ11_06520 PF00970 Oxidoreductase FAD-binding domain JKJ11_06520 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_06525 PF00268 Ribonucleotide reductase, small chain JKJ11_06530 PF00317 Ribonucleotide reductase, all-alpha domain JKJ11_06530 PF03477 ATP cone domain JKJ11_06530 PF02867 Ribonucleotide reductase, barrel domain JKJ11_06540 PF00521 DNA gyrase/topoisomerase IV, subunit A JKJ11_06540 PF03989 DNA gyrase C-terminal domain, beta-propeller JKJ11_06560 PF01053 Cys/Met metabolism PLP-dependent enzyme JKJ11_06565 PF13396 Phospholipase_D-nuclease N-terminal JKJ11_06565 PF13091 PLD-like domain JKJ11_06570 PF00209 Sodium:neurotransmitter symporter family JKJ11_06575 PF00849 RNA pseudouridylate synthase JKJ11_06580 PF02926 THUMP domain JKJ11_06580 PF10672 S-adenosylmethionine-dependent methyltransferase JKJ11_06580 PF01170 Putative RNA methylase family UPF0020 JKJ11_06590 PF06945 Protein of unknown function (DUF1289) JKJ11_06595 PF00072 Response regulator receiver domain JKJ11_06600 PF05230 MASE2 domain JKJ11_06600 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_06615 PF00860 Permease family JKJ11_06625 PF00005 ABC transporter JKJ11_06625 PF17912 MalK OB fold domain JKJ11_06630 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06635 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06640 PF13416 Bacterial extracellular solute-binding protein JKJ11_06645 PF03009 Glycerophosphoryl diester phosphodiesterase family JKJ11_06650 PF00455 DeoR C terminal sensor domain JKJ11_06650 PF08220 DeoR-like helix-turn-helix domain JKJ11_06655 PF11849 Domain of unknown function (DUF3369) JKJ11_06660 PF00294 pfkB family carbohydrate kinase JKJ11_06665 PF04227 Indigoidine synthase A like protein JKJ11_06680 PF02001 Protein of unknown function DUF134 JKJ11_06690 PF00072 Response regulator receiver domain JKJ11_06695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_06695 PF01627 Hpt domain JKJ11_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_06695 PF00672 HAMP domain JKJ11_06695 PF00072 Response regulator receiver domain JKJ11_06695 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_06700 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_06705 PF00455 DeoR C terminal sensor domain JKJ11_06705 PF08220 DeoR-like helix-turn-helix domain JKJ11_06710 PF01266 FAD dependent oxidoreductase JKJ11_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_06715 PF03466 LysR substrate binding domain JKJ11_06720 PF00561 alpha/beta hydrolase fold JKJ11_06730 PF01980 tRNA-methyltransferase O JKJ11_06745 PF01381 Helix-turn-helix JKJ11_06745 PF07883 Cupin domain JKJ11_06750 PF03594 Benzoate membrane transport protein JKJ11_06755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_06755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_06760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JKJ11_06760 PF01266 FAD dependent oxidoreductase JKJ11_06775 PF00158 Sigma-54 interaction domain JKJ11_06775 PF18024 Helix-turn-helix domain JKJ11_06780 PF13302 Acetyltransferase (GNAT) domain JKJ11_06795 PF02965 Vitamin B12 dependent methionine synthase, activation domain JKJ11_06795 PF00809 Pterin binding enzyme JKJ11_06795 PF02574 Homocysteine S-methyltransferase JKJ11_06795 PF02310 B12 binding domain JKJ11_06795 PF02607 B12 binding domain JKJ11_06800 PF00939 Sodium:sulfate symporter transmembrane region JKJ11_06805 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_06805 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_06815 PF00581 Rhodanese-like domain JKJ11_06820 PF13244 Domain of unknown function (DUF4040) JKJ11_06820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JKJ11_06820 PF00361 Proton-conducting membrane transporter JKJ11_06820 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JKJ11_06825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JKJ11_06830 PF00361 Proton-conducting membrane transporter JKJ11_06835 PF01899 Na+/H+ ion antiporter subunit JKJ11_06840 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JKJ11_06845 PF03334 Na+/H+ antiporter subunit JKJ11_06855 PF04013 Putative SAM-dependent RNA methyltransferase JKJ11_06870 PF05036 Sporulation related domain JKJ11_06870 PF03330 Lytic transglycolase JKJ11_06875 PF14602 Hexapeptide repeat of succinyl-transferase JKJ11_06875 PF12464 Maltose acetyltransferase JKJ11_06880 PF00356 Bacterial regulatory proteins, lacI family JKJ11_06890 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06895 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_06900 PF00005 ABC transporter JKJ11_06900 PF08402 TOBE domain JKJ11_06905 PF00149 Calcineurin-like phosphoesterase JKJ11_06915 PF00106 short chain dehydrogenase JKJ11_06925 PF00155 Aminotransferase class I and II JKJ11_06930 PF01594 AI-2E family transporter JKJ11_06940 PF13533 Biotin-lipoyl like JKJ11_06965 PF00375 Sodium:dicarboxylate symporter family JKJ11_06975 PF00140 Sigma-70 factor, region 1.2 JKJ11_06975 PF04542 Sigma-70 region 2 JKJ11_06975 PF04545 Sigma-70, region 4 JKJ11_06975 PF04539 Sigma-70 region 3 JKJ11_06985 PF02277 Phosphoribosyltransferase JKJ11_06990 PF02654 Cobalamin-5-phosphate synthase JKJ11_06995 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JKJ11_07010 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JKJ11_07015 PF01032 FecCD transport family JKJ11_07020 PF00005 ABC transporter JKJ11_07025 PF00916 Sulfate permease family JKJ11_07025 PF01740 STAS domain JKJ11_07045 PF03466 LysR substrate binding domain JKJ11_07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_07075 PF03466 LysR substrate binding domain JKJ11_07090 PF00892 EamA-like transporter family JKJ11_07095 PF01047 MarR family JKJ11_07105 PF01274 Malate synthase JKJ11_07110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_07110 PF00205 Thiamine pyrophosphate enzyme, central domain JKJ11_07110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_07115 PF01261 Xylose isomerase-like TIM barrel JKJ11_07120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JKJ11_07120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_07145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_07150 PF01979 Amidohydrolase family JKJ11_07155 PF00860 Permease family JKJ11_07160 PF00860 Permease family JKJ11_07165 PF00576 HIUase/Transthyretin family JKJ11_07175 PF09349 OHCU decarboxylase JKJ11_07175 PF01014 Uricase JKJ11_07180 PF03561 Allantoicase repeat JKJ11_07185 PF04115 Ureidoglycolate lyase JKJ11_07200 PF00106 short chain dehydrogenase JKJ11_07205 PF12833 Helix-turn-helix domain JKJ11_07205 PF02311 AraC-like ligand binding domain JKJ11_07225 PF00206 Lyase JKJ11_07225 PF10415 Fumarase C C-terminus JKJ11_07230 PF00171 Aldehyde dehydrogenase family JKJ11_07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_07235 PF03466 LysR substrate binding domain JKJ11_07240 PF00248 Aldo/keto reductase family JKJ11_07245 PF00557 Metallopeptidase family M24 JKJ11_07250 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_07255 PF01638 HxlR-like helix-turn-helix JKJ11_07265 PF01323 DSBA-like thioredoxin domain JKJ11_07285 PF02311 AraC-like ligand binding domain JKJ11_07285 PF12833 Helix-turn-helix domain JKJ11_07290 PF00561 alpha/beta hydrolase fold JKJ11_07315 PF02558 Ketopantoate reductase PanE/ApbA JKJ11_07315 PF08546 Ketopantoate reductase PanE/ApbA C terminal JKJ11_07330 PF01979 Amidohydrolase family JKJ11_07340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JKJ11_07340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JKJ11_07345 PF03450 CO dehydrogenase flavoprotein C-terminal domain JKJ11_07345 PF00941 FAD binding domain in molybdopterin dehydrogenase JKJ11_07350 PF00392 Bacterial regulatory proteins, gntR family JKJ11_07350 PF07729 FCD domain JKJ11_07355 PF03741 Integral membrane protein TerC family JKJ11_07365 PF01144 Coenzyme A transferase JKJ11_07370 PF01144 Coenzyme A transferase JKJ11_07375 PF00108 Thiolase, N-terminal domain JKJ11_07375 PF02803 Thiolase, C-terminal domain JKJ11_07380 PF01261 Xylose isomerase-like TIM barrel JKJ11_07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_07390 PF03466 LysR substrate binding domain JKJ11_07395 PF00083 Sugar (and other) transporter JKJ11_07400 PF01261 Xylose isomerase-like TIM barrel JKJ11_07405 PF00205 Thiamine pyrophosphate enzyme, central domain JKJ11_07405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_07405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_07410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JKJ11_07410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JKJ11_07415 PF00294 pfkB family carbohydrate kinase JKJ11_07425 PF01116 Fructose-bisphosphate aldolase class-II JKJ11_07435 PF01261 Xylose isomerase-like TIM barrel JKJ11_07440 PF04962 KduI/IolB family JKJ11_07445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JKJ11_07445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JKJ11_07455 PF02653 Branched-chain amino acid transport system / permease component JKJ11_07460 PF00005 ABC transporter JKJ11_07465 PF13407 Periplasmic binding protein domain JKJ11_07470 PF00294 pfkB family carbohydrate kinase JKJ11_07475 PF00171 Aldehyde dehydrogenase family JKJ11_07490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JKJ11_07490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_07490 PF01842 ACT domain JKJ11_07505 PF00005 ABC transporter JKJ11_07505 PF00664 ABC transporter transmembrane region JKJ11_07510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_07510 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_07530 PF13426 PAS domain JKJ11_07530 PF07228 Stage II sporulation protein E (SpoIIE) JKJ11_07535 PF01740 STAS domain JKJ11_07540 PF00483 Nucleotidyl transferase JKJ11_07550 PF16353 Domain of unknown function(DUF4981) JKJ11_07550 PF00703 Glycosyl hydrolases family 2 JKJ11_07550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JKJ11_07550 PF02837 Glycosyl hydrolases family 2, sugar binding domain JKJ11_07550 PF02929 Beta galactosidase small chain JKJ11_07590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JKJ11_07590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JKJ11_07590 PF03129 Anticodon binding domain JKJ11_07590 PF02824 TGS domain JKJ11_07595 PF05198 Translation initiation factor IF-3, N-terminal domain JKJ11_07595 PF00707 Translation initiation factor IF-3, C-terminal domain JKJ11_07600 PF01632 Ribosomal protein L35 JKJ11_07605 PF00453 Ribosomal protein L20 JKJ11_07610 PF13495 Phage integrase, N-terminal SAM-like domain JKJ11_07610 PF00589 Phage integrase family JKJ11_07710 PF07237 Protein of unknown function (DUF1428) JKJ11_07830 PF00005 ABC transporter JKJ11_07830 PF00664 ABC transporter transmembrane region JKJ11_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_07855 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_07855 PF01627 Hpt domain JKJ11_07855 PF00072 Response regulator receiver domain JKJ11_07855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_07855 PF00672 HAMP domain JKJ11_07870 PF00106 short chain dehydrogenase JKJ11_07875 PF02803 Thiolase, C-terminal domain JKJ11_07875 PF00108 Thiolase, N-terminal domain JKJ11_07885 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JKJ11_07895 PF00375 Sodium:dicarboxylate symporter family JKJ11_07925 PF00072 Response regulator receiver domain JKJ11_07930 PF07963 Prokaryotic N-terminal methylation motif JKJ11_07950 PF07729 FCD domain JKJ11_07950 PF00392 Bacterial regulatory proteins, gntR family JKJ11_07960 PF00285 Citrate synthase, C-terminal domain JKJ11_07965 PF00330 Aconitase family (aconitate hydratase) JKJ11_07965 PF00694 Aconitase C-terminal domain JKJ11_07970 PF04303 PrpF protein JKJ11_07975 PF13193 AMP-binding enzyme C-terminal domain JKJ11_07975 PF00501 AMP-binding enzyme JKJ11_07975 PF16177 Acetyl-coenzyme A synthetase N-terminus JKJ11_07995 PF01235 Sodium:alanine symporter family JKJ11_08025 PF01554 MatE JKJ11_08035 PF02222 ATP-grasp domain JKJ11_08040 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JKJ11_08040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JKJ11_08045 PF04172 LrgB-like family JKJ11_08050 PF03788 LrgA family JKJ11_08055 PF00929 Exonuclease JKJ11_08055 PF08411 Exonuclease C-terminal JKJ11_08080 PF00583 Acetyltransferase (GNAT) family JKJ11_08090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_08095 PF02567 Phenazine biosynthesis-like protein JKJ11_08125 PF12833 Helix-turn-helix domain JKJ11_08130 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_08130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_08140 PF01594 AI-2E family transporter JKJ11_08145 PF13091 PLD-like domain JKJ11_08145 PF13396 Phospholipase_D-nuclease N-terminal JKJ11_08155 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JKJ11_08155 PF12833 Helix-turn-helix domain JKJ11_08180 PF00012 Hsp70 protein JKJ11_08185 PF00012 Hsp70 protein JKJ11_08195 PF17158 Membrane-associated sensor, integral membrane domain JKJ11_08195 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_08225 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JKJ11_08225 PF11898 Domain of unknown function (DUF3418) JKJ11_08225 PF04408 Helicase associated domain (HA2) JKJ11_08225 PF00271 Helicase conserved C-terminal domain JKJ11_08225 PF00270 DEAD/DEAH box helicase JKJ11_08235 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JKJ11_08255 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JKJ11_08260 PF01810 LysE type translocator JKJ11_08270 PF03453 MoeA N-terminal region (domain I and II) JKJ11_08270 PF03454 MoeA C-terminal region (domain IV) JKJ11_08270 PF00994 Probable molybdopterin binding domain JKJ11_08275 PF12804 MobA-like NTP transferase domain JKJ11_08280 PF08402 TOBE domain JKJ11_08280 PF00005 ABC transporter JKJ11_08285 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_08290 PF12849 PBP superfamily domain JKJ11_08295 PF02954 Bacterial regulatory protein, Fis family JKJ11_08295 PF00072 Response regulator receiver domain JKJ11_08295 PF00158 Sigma-54 interaction domain JKJ11_08300 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_08300 PF00989 PAS fold JKJ11_08300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_08325 PF12848 ABC transporter JKJ11_08325 PF00005 ABC transporter JKJ11_08330 PF02634 FdhD/NarQ family JKJ11_08350 PF02613 Nitrate reductase delta subunit JKJ11_08360 PF01568 Molydopterin dinucleotide binding domain JKJ11_08360 PF00384 Molybdopterin oxidoreductase JKJ11_08360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_08365 PF13247 4Fe-4S dicluster domain JKJ11_08380 PF00909 Ammonium Transporter Family JKJ11_08385 PF02146 Sir2 family JKJ11_08390 PF13416 Bacterial extracellular solute-binding protein JKJ11_08395 PF13416 Bacterial extracellular solute-binding protein JKJ11_08400 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_08405 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_08410 PF08402 TOBE domain JKJ11_08410 PF00005 ABC transporter JKJ11_08430 PF01171 PP-loop family JKJ11_08435 PF00582 Universal stress protein family JKJ11_08440 PF00027 Cyclic nucleotide-binding domain JKJ11_08440 PF13545 Crp-like helix-turn-helix domain JKJ11_08455 PF00403 Heavy-metal-associated domain JKJ11_08465 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JKJ11_08465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JKJ11_08480 PF00115 Cytochrome C and Quinol oxidase polypeptide I JKJ11_08490 PF00005 ABC transporter JKJ11_08490 PF00664 ABC transporter transmembrane region JKJ11_08495 PF03412 Peptidase C39 family JKJ11_08495 PF00005 ABC transporter JKJ11_08495 PF00664 ABC transporter transmembrane region JKJ11_08650 PF06303 MatP N-terminal domain JKJ11_08650 PF17414 MatP C-terminal ribbon-helix-helix domain JKJ11_08655 PF05362 Lon protease (S16) C-terminal proteolytic domain JKJ11_08655 PF13654 AAA domain JKJ11_08660 PF07977 FabA-like domain JKJ11_08665 PF04957 Ribosome modulation factor JKJ11_08675 PF00005 ABC transporter JKJ11_08675 PF16326 ABC transporter C-terminal domain JKJ11_08675 PF12848 ABC transporter JKJ11_08685 PF10672 S-adenosylmethionine-dependent methyltransferase JKJ11_08685 PF02926 THUMP domain JKJ11_08685 PF01170 Putative RNA methylase family UPF0020 JKJ11_08690 PF07126 Cell-division protein ZapC JKJ11_08695 PF01180 Dihydroorotate dehydrogenase JKJ11_08700 PF05088 Bacterial NAD-glutamate dehydrogenase JKJ11_08710 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JKJ11_08710 PF01433 Peptidase family M1 domain JKJ11_08710 PF11940 Domain of unknown function (DUF3458) Ig-like fold JKJ11_08720 PF11818 C-terminal domain of tail specific protease (DUF3340) JKJ11_08720 PF00595 PDZ domain JKJ11_08720 PF17804 Tail specific protease N-terminal domain JKJ11_08720 PF03572 Peptidase family S41 JKJ11_08725 PF17516 ProQ C-terminal domain JKJ11_08725 PF04352 ProQ/FINO family JKJ11_08730 PF13185 GAF domain JKJ11_08735 PF00664 ABC transporter transmembrane region JKJ11_08735 PF00005 ABC transporter JKJ11_08740 PF04403 Paraquat-inducible protein A JKJ11_08745 PF02470 MlaD protein JKJ11_08750 PF01189 16S rRNA methyltransferase RsmB/F JKJ11_08750 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JKJ11_08750 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JKJ11_08755 PF17783 CvfB-like winged helix domain JKJ11_08755 PF13509 S1 domain JKJ11_08775 PF00793 DAHP synthetase I family JKJ11_08780 PF04461 Protein of unknown function (DUF520) JKJ11_08785 PF10414 Sirohaem synthase dimerisation region JKJ11_08785 PF14824 Sirohaem biosynthesis protein central JKJ11_08785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JKJ11_08790 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_08795 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_08800 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_08805 PF00005 ABC transporter JKJ11_08810 PF01027 Inhibitor of apoptosis-promoting Bax1 JKJ11_08815 PF04358 DsrC like protein JKJ11_08820 PF00708 Acylphosphatase JKJ11_08825 PF10672 S-adenosylmethionine-dependent methyltransferase JKJ11_08825 PF17785 PUA-like domain JKJ11_08835 PF00691 OmpA family JKJ11_08835 PF05736 OprF membrane domain JKJ11_08845 PF06508 Queuosine biosynthesis protein QueC JKJ11_08850 PF04055 Radical SAM superfamily JKJ11_08860 PF00781 Diacylglycerol kinase catalytic domain JKJ11_08865 PF00480 ROK family JKJ11_08870 PF03942 DTW domain JKJ11_08880 PF00672 HAMP domain JKJ11_08880 PF12729 Four helix bundle sensory module for signal transduction JKJ11_08880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_08885 PF00877 NlpC/P60 family JKJ11_08895 PF03881 Fructosamine kinase JKJ11_08910 PF01810 LysE type translocator JKJ11_08930 PF00583 Acetyltransferase (GNAT) family JKJ11_08935 PF00472 RF-1 domain JKJ11_08950 PF00924 Mechanosensitive ion channel JKJ11_08950 PF05552 Conserved TM helix JKJ11_08975 PF01734 Patatin-like phospholipase JKJ11_09005 PF03918 Cytochrome C biogenesis protein JKJ11_09010 PF01578 Cytochrome C assembly protein JKJ11_09010 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JKJ11_09015 PF03916 Polysulphide reductase, NrfD JKJ11_09020 PF13247 4Fe-4S dicluster domain JKJ11_09030 PF02335 Cytochrome c552 JKJ11_09040 PF00970 Oxidoreductase FAD-binding domain JKJ11_09040 PF00175 Oxidoreductase NAD-binding domain JKJ11_09050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JKJ11_09050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JKJ11_09060 PF03618 Kinase/pyrophosphorylase JKJ11_09065 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_09065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JKJ11_09065 PF00391 PEP-utilising enzyme, mobile domain JKJ11_09080 PF05724 Thiopurine S-methyltransferase (TPMT) JKJ11_09090 PF00216 Bacterial DNA-binding protein JKJ11_09095 PF01588 Putative tRNA binding domain JKJ11_09095 PF03483 B3/4 domain JKJ11_09095 PF03484 tRNA synthetase B5 domain JKJ11_09095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JKJ11_09095 PF03147 Ferredoxin-fold anticodon binding domain JKJ11_09100 PF01409 tRNA synthetases class II core domain (F) JKJ11_09100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JKJ11_09105 PF08241 Methyltransferase domain JKJ11_09120 PF02525 Flavodoxin-like fold JKJ11_09125 PF02254 TrkA-N domain JKJ11_09125 PF00999 Sodium/hydrogen exchanger family JKJ11_09130 PF01554 MatE JKJ11_09145 PF05552 Conserved TM helix JKJ11_09145 PF00924 Mechanosensitive ion channel JKJ11_09150 PF07690 Major Facilitator Superfamily JKJ11_09155 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_09165 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_09185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JKJ11_09185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JKJ11_09185 PF04324 BFD-like [2Fe-2S] binding domain JKJ11_09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_09185 PF18267 Rubredoxin NAD+ reductase C-terminal domain JKJ11_09190 PF13806 Rieske-like [2Fe-2S] domain JKJ11_09195 PF01226 Formate/nitrite transporter JKJ11_09200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JKJ11_09200 PF14824 Sirohaem biosynthesis protein central JKJ11_09200 PF10414 Sirohaem synthase dimerisation region JKJ11_09205 PF00691 OmpA family JKJ11_09240 PF00437 Type II/IV secretion system protein JKJ11_09255 PF13629 Pilus formation protein N terminal region JKJ11_09255 PF00263 Bacterial type II and III secretion system protein JKJ11_09255 PF04972 BON domain JKJ11_09280 PF01464 Transglycosylase SLT domain JKJ11_09280 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JKJ11_09290 PF00691 OmpA family JKJ11_09290 PF05736 OprF membrane domain JKJ11_09325 PF00437 Type II/IV secretion system protein JKJ11_09330 PF10609 NUBPL iron-transfer P-loop NTPase JKJ11_09340 PF04972 BON domain JKJ11_09340 PF00263 Bacterial type II and III secretion system protein JKJ11_09340 PF13629 Pilus formation protein N terminal region JKJ11_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_09360 PF03466 LysR substrate binding domain JKJ11_09365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JKJ11_09365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JKJ11_09370 PF08021 Siderophore-interacting FAD-binding domain JKJ11_09370 PF04954 Siderophore-interacting protein JKJ11_09380 PF01042 Endoribonuclease L-PSP JKJ11_09385 PF03222 Tryptophan/tyrosine permease family JKJ11_09390 PF01212 Beta-eliminating lyase JKJ11_09410 PF00881 Nitroreductase family JKJ11_09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_09415 PF03466 LysR substrate binding domain JKJ11_09420 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_09420 PF00107 Zinc-binding dehydrogenase JKJ11_09435 PF06715 Gp5 C-terminal repeat (3 copies) JKJ11_09435 PF04717 Type VI secretion system, phage-baseplate injector JKJ11_09465 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JKJ11_09490 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_09490 PF17871 AAA lid domain JKJ11_09490 PF07724 AAA domain (Cdc48 subfamily) JKJ11_09490 PF10431 C-terminal, D2-small domain, of ClpB protein JKJ11_09520 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JKJ11_09535 PF03793 PASTA domain JKJ11_09535 PF00069 Protein kinase domain JKJ11_09555 PF02913 FAD linked oxidases, C-terminal domain JKJ11_09555 PF01565 FAD binding domain JKJ11_09555 PF13183 4Fe-4S dicluster domain JKJ11_09585 PF01259 SAICAR synthetase JKJ11_09595 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JKJ11_09595 PF00271 Helicase conserved C-terminal domain JKJ11_09595 PF00270 DEAD/DEAH box helicase JKJ11_09595 PF04408 Helicase associated domain (HA2) JKJ11_09600 PF00390 Malic enzyme, N-terminal domain JKJ11_09600 PF03949 Malic enzyme, NAD binding domain JKJ11_09610 PF02698 DUF218 domain JKJ11_09620 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_09620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_09625 PF00664 ABC transporter transmembrane region JKJ11_09625 PF00005 ABC transporter JKJ11_09630 PF13416 Bacterial extracellular solute-binding protein JKJ11_09635 PF00563 EAL domain JKJ11_09635 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_09635 PF03707 Bacterial signalling protein N terminal repeat JKJ11_09645 PF00266 Aminotransferase class-V JKJ11_09655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_09660 PF00005 ABC transporter JKJ11_09660 PF00664 ABC transporter transmembrane region JKJ11_09665 PF00005 ABC transporter JKJ11_09665 PF00664 ABC transporter transmembrane region JKJ11_09670 PF00571 CBS domain JKJ11_09670 PF03471 Transporter associated domain JKJ11_09670 PF01595 Cyclin M transmembrane N-terminal domain JKJ11_09675 PF00266 Aminotransferase class-V JKJ11_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_09685 PF00072 Response regulator receiver domain JKJ11_09685 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_09685 PF08448 PAS fold JKJ11_09685 PF13188 PAS domain JKJ11_09700 PF04993 TfoX N-terminal domain JKJ11_09700 PF04994 TfoX C-terminal domain JKJ11_09710 PF03956 Lysine exporter LysO JKJ11_09720 PF00282 Pyridoxal-dependent decarboxylase conserved domain JKJ11_09725 PF01418 Helix-turn-helix domain, rpiR family JKJ11_09725 PF01380 SIS domain JKJ11_09730 PF00171 Aldehyde dehydrogenase family JKJ11_09730 PF00465 Iron-containing alcohol dehydrogenase JKJ11_09735 PF00462 Glutaredoxin JKJ11_09740 PF06826 Predicted Permease Membrane Region JKJ11_09740 PF02080 TrkA-C domain JKJ11_09745 PF12241 Trans-2-enoyl-CoA reductase catalytic region JKJ11_09745 PF07055 Enoyl reductase FAD binding domain JKJ11_09745 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JKJ11_09750 PF02770 Acyl-CoA dehydrogenase, middle domain JKJ11_09750 PF09317 Domain of unknown function (DUF1974) JKJ11_09750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JKJ11_09750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JKJ11_09755 PF00440 Bacterial regulatory proteins, tetR family JKJ11_09760 PF06965 Na+/H+ antiporter 1 JKJ11_09770 PF02687 FtsX-like permease family JKJ11_09770 PF12704 MacB-like periplasmic core domain JKJ11_09775 PF00005 ABC transporter JKJ11_09780 PF13460 NAD(P)H-binding JKJ11_09780 PF11066 Protein of unknown function (DUF2867) JKJ11_09790 PF07690 Major Facilitator Superfamily JKJ11_09795 PF01479 S4 domain JKJ11_09795 PF00849 RNA pseudouridylate synthase JKJ11_09800 PF04851 Type III restriction enzyme, res subunit JKJ11_09800 PF00271 Helicase conserved C-terminal domain JKJ11_09810 PF00486 Transcriptional regulatory protein, C terminal JKJ11_09810 PF00072 Response regulator receiver domain JKJ11_09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_09820 PF01386 Ribosomal L25p family JKJ11_09855 PF07726 ATPase family associated with various cellular activities (AAA) JKJ11_09855 PF17863 AAA lid domain JKJ11_09860 PF16385 Domain of unknown function JKJ11_09860 PF00884 Sulfatase JKJ11_09870 PF13186 Iron-sulfur cluster-binding domain JKJ11_09870 PF04055 Radical SAM superfamily JKJ11_09885 PF03466 LysR substrate binding domain JKJ11_09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_09900 PF03466 LysR substrate binding domain JKJ11_09905 PF00196 Bacterial regulatory proteins, luxR family JKJ11_09905 PF00072 Response regulator receiver domain JKJ11_09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_09910 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_09915 PF13247 4Fe-4S dicluster domain JKJ11_09920 PF03916 Polysulphide reductase, NrfD JKJ11_09925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_09925 PF00384 Molybdopterin oxidoreductase JKJ11_09925 PF01568 Molydopterin dinucleotide binding domain JKJ11_09940 PF12833 Helix-turn-helix domain JKJ11_09945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_09950 PF00923 Transaldolase/Fructose-6-phosphate aldolase JKJ11_09955 PF04321 RmlD substrate binding domain JKJ11_09960 PF04055 Radical SAM superfamily JKJ11_09965 PF01228 Glycine radical JKJ11_09965 PF02901 Pyruvate formate lyase-like JKJ11_09970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_09980 PF05524 PEP-utilising enzyme, N-terminal JKJ11_09980 PF00391 PEP-utilising enzyme, mobile domain JKJ11_09980 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_09980 PF00381 PTS HPr component phosphorylation site JKJ11_09980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_09985 PF03928 Haem-degrading JKJ11_09990 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_09995 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_09995 PF03707 Bacterial signalling protein N terminal repeat JKJ11_09995 PF00563 EAL domain JKJ11_10005 PF01938 TRAM domain JKJ11_10005 PF00919 Uncharacterized protein family UPF0004 JKJ11_10005 PF04055 Radical SAM superfamily JKJ11_10010 PF02151 UvrB/uvrC motif JKJ11_10010 PF12344 Ultra-violet resistance protein B JKJ11_10010 PF17757 UvrB interaction domain JKJ11_10010 PF04851 Type III restriction enzyme, res subunit JKJ11_10010 PF00271 Helicase conserved C-terminal domain JKJ11_10015 PF00664 ABC transporter transmembrane region JKJ11_10015 PF00005 ABC transporter JKJ11_10020 PF00664 ABC transporter transmembrane region JKJ11_10020 PF00005 ABC transporter JKJ11_10030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JKJ11_10035 PF00005 ABC transporter JKJ11_10035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_10040 PF00005 ABC transporter JKJ11_10040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_10045 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_10045 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_10050 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_10055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_10065 PF02779 Transketolase, pyrimidine binding domain JKJ11_10065 PF02780 Transketolase, C-terminal domain JKJ11_10065 PF00456 Transketolase, thiamine diphosphate binding domain JKJ11_10085 PF00107 Zinc-binding dehydrogenase JKJ11_10085 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_10090 PF02378 Phosphotransferase system, EIIC JKJ11_10090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_10095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_10105 PF01040 UbiA prenyltransferase family JKJ11_10110 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JKJ11_10115 PF00510 Cytochrome c oxidase subunit III JKJ11_10120 PF00115 Cytochrome C and Quinol oxidase polypeptide I JKJ11_10125 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JKJ11_10125 PF06481 COX Aromatic Rich Motif JKJ11_10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10130 PF03466 LysR substrate binding domain JKJ11_10135 PF00709 Adenylosuccinate synthetase JKJ11_10160 PF00550 Phosphopantetheine attachment site JKJ11_10165 PF00550 Phosphopantetheine attachment site JKJ11_10175 PF00501 AMP-binding enzyme JKJ11_10175 PF13193 AMP-binding enzyme C-terminal domain JKJ11_10175 PF16177 Acetyl-coenzyme A synthetase N-terminus JKJ11_10190 PF00221 Aromatic amino acid lyase JKJ11_10215 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_10215 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_10220 PF07977 FabA-like domain JKJ11_10230 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_10230 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_10235 PF14863 Alkyl sulfatase dimerisation JKJ11_10235 PF14864 Alkyl sulfatase C-terminal JKJ11_10235 PF00753 Metallo-beta-lactamase superfamily JKJ11_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10240 PF03466 LysR substrate binding domain JKJ11_10245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_10250 PF00873 AcrB/AcrD/AcrF family JKJ11_10255 PF02321 Outer membrane efflux protein JKJ11_10295 PF08212 Lipocalin-like domain JKJ11_10300 PF00753 Metallo-beta-lactamase superfamily JKJ11_10305 PF03009 Glycerophosphoryl diester phosphodiesterase family JKJ11_10310 PF03466 LysR substrate binding domain JKJ11_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10320 PF07687 Peptidase dimerisation domain JKJ11_10320 PF01546 Peptidase family M20/M25/M40 JKJ11_10340 PF04204 Homoserine O-succinyltransferase JKJ11_10350 PF00501 AMP-binding enzyme JKJ11_10350 PF13193 AMP-binding enzyme C-terminal domain JKJ11_10360 PF05971 RNA methyltransferase JKJ11_10365 PF01863 Protein of unknown function DUF45 JKJ11_10370 PF00925 GTP cyclohydrolase II JKJ11_10370 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JKJ11_10380 PF03547 Membrane transport protein JKJ11_10385 PF00121 Triosephosphate isomerase JKJ11_10390 PF02734 DAK2 domain JKJ11_10395 PF02733 Dak1 domain JKJ11_10400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JKJ11_10405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_10405 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_10415 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_10420 PF02502 Ribose/Galactose Isomerase JKJ11_10425 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JKJ11_10430 PF13936 Helix-turn-helix domain JKJ11_10430 PF04198 Putative sugar-binding domain JKJ11_10440 PF00768 D-alanyl-D-alanine carboxypeptidase JKJ11_10440 PF07943 Penicillin-binding protein 5, C-terminal domain JKJ11_10445 PF00375 Sodium:dicarboxylate symporter family JKJ11_10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_10455 PF17152 Periplasmic sensor domain JKJ11_10455 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_10460 PF13416 Bacterial extracellular solute-binding protein JKJ11_10465 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_10470 PF00005 ABC transporter JKJ11_10475 PF01066 CDP-alcohol phosphatidyltransferase JKJ11_10480 PF01844 HNH endonuclease JKJ11_10485 PF00248 Aldo/keto reductase family JKJ11_10495 PF13533 Biotin-lipoyl like JKJ11_10500 PF00873 AcrB/AcrD/AcrF family JKJ11_10505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JKJ11_10505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_10510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JKJ11_10510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JKJ11_10515 PF00356 Bacterial regulatory proteins, lacI family JKJ11_10535 PF00474 Sodium:solute symporter family JKJ11_10540 PF03315 Serine dehydratase beta chain JKJ11_10540 PF03313 Serine dehydratase alpha chain JKJ11_10555 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_10560 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_10565 PF17912 MalK OB fold domain JKJ11_10565 PF00005 ABC transporter JKJ11_10570 PF08402 TOBE domain JKJ11_10570 PF00005 ABC transporter JKJ11_10575 PF00158 Sigma-54 interaction domain JKJ11_10575 PF02954 Bacterial regulatory protein, Fis family JKJ11_10575 PF01590 GAF domain JKJ11_10580 PF02525 Flavodoxin-like fold JKJ11_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10585 PF03466 LysR substrate binding domain JKJ11_10595 PF05128 Domain of unknown function (DUF697) JKJ11_10600 PF04317 YcjX-like family, DUF463 JKJ11_10615 PF00425 chorismate binding enzyme JKJ11_10615 PF04715 Anthranilate synthase component I, N terminal region JKJ11_10620 PF09308 LuxQ, periplasmic JKJ11_10620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_10620 PF00072 Response regulator receiver domain JKJ11_10620 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_10635 PF00563 EAL domain JKJ11_10635 PF00498 FHA domain JKJ11_10635 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_10650 PF04545 Sigma-70, region 4 JKJ11_10650 PF04539 Sigma-70 region 3 JKJ11_10650 PF04542 Sigma-70 region 2 JKJ11_10650 PF00140 Sigma-70 factor, region 1.2 JKJ11_10660 PF00293 NUDIX domain JKJ11_10665 PF03222 Tryptophan/tyrosine permease family JKJ11_10670 PF03315 Serine dehydratase beta chain JKJ11_10670 PF03313 Serine dehydratase alpha chain JKJ11_10675 PF01242 6-pyruvoyl tetrahydropterin synthase JKJ11_10685 PF00535 Glycosyl transferase family 2 JKJ11_10695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_10700 PF00152 tRNA synthetases class II (D, K and N) JKJ11_10700 PF01336 OB-fold nucleic acid binding domain JKJ11_10710 PF00155 Aminotransferase class I and II JKJ11_10725 PF00672 HAMP domain JKJ11_10725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_10725 PF02743 Cache domain JKJ11_10730 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_10735 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_10740 PF01047 MarR family JKJ11_10745 PF00072 Response regulator receiver domain JKJ11_10745 PF00196 Bacterial regulatory proteins, luxR family JKJ11_10750 PF17200 Single Cache domain 2 JKJ11_10750 PF07730 Histidine kinase JKJ11_10755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_10765 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_10780 PF00753 Metallo-beta-lactamase superfamily JKJ11_10785 PF05951 Bacterial protein of unknown function (DUF882) JKJ11_10790 PF03734 L,D-transpeptidase catalytic domain JKJ11_10790 PF01471 Putative peptidoglycan binding domain JKJ11_10815 PF00925 GTP cyclohydrolase II JKJ11_10830 PF03880 DbpA RNA binding domain JKJ11_10830 PF00271 Helicase conserved C-terminal domain JKJ11_10830 PF00270 DEAD/DEAH box helicase JKJ11_10840 PF02613 Nitrate reductase delta subunit JKJ11_10845 PF04976 DMSO reductase anchor subunit (DmsC) JKJ11_10850 PF12800 4Fe-4S binding domain JKJ11_10850 PF13247 4Fe-4S dicluster domain JKJ11_10855 PF00384 Molybdopterin oxidoreductase JKJ11_10855 PF01568 Molydopterin dinucleotide binding domain JKJ11_10855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_10860 PF03466 LysR substrate binding domain JKJ11_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10875 PF00072 Response regulator receiver domain JKJ11_10875 PF00486 Transcriptional regulatory protein, C terminal JKJ11_10885 PF03466 LysR substrate binding domain JKJ11_10885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_10900 PF02378 Phosphotransferase system, EIIC JKJ11_10900 PF00367 phosphotransferase system, EIIB JKJ11_10905 PF08244 Glycosyl hydrolases family 32 C terminal JKJ11_10905 PF00251 Glycosyl hydrolases family 32 N-terminal domain JKJ11_10910 PF00356 Bacterial regulatory proteins, lacI family JKJ11_10920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JKJ11_10925 PF16653 Saccharopine dehydrogenase C-terminal domain JKJ11_10925 PF03435 Saccharopine dehydrogenase NADP binding domain JKJ11_10930 PF00202 Aminotransferase class-III JKJ11_10935 PF00677 Lumazine binding domain JKJ11_10960 PF01066 CDP-alcohol phosphatidyltransferase JKJ11_10965 PF01541 GIY-YIG catalytic domain JKJ11_10965 PF08459 UvrC Helix-hairpin-helix N-terminal JKJ11_10965 PF02151 UvrB/uvrC motif JKJ11_10970 PF00072 Response regulator receiver domain JKJ11_10970 PF00196 Bacterial regulatory proteins, luxR family JKJ11_10975 PF03104 DNA polymerase family B, exonuclease domain JKJ11_10975 PF00136 DNA polymerase family B JKJ11_10985 PF08207 Elongation factor P (EF-P) KOW-like domain JKJ11_10985 PF09285 Elongation factor P, C-terminal JKJ11_10985 PF01132 Elongation factor P (EF-P) OB domain JKJ11_10990 PF04269 Protein of unknown function, DUF440 JKJ11_10995 PF01569 PAP2 superfamily JKJ11_11005 PF01368 DHH family JKJ11_11005 PF02833 DHHA2 domain JKJ11_11020 PF18364 Molybdopterin oxidoreductase N-terminal domain JKJ11_11020 PF00384 Molybdopterin oxidoreductase JKJ11_11020 PF01568 Molydopterin dinucleotide binding domain JKJ11_11025 PF03264 NapC/NirT cytochrome c family, N-terminal region JKJ11_11030 PF06796 Periplasmic nitrate reductase protein NapE JKJ11_11035 PF03649 Uncharacterised protein family (UPF0014) JKJ11_11045 PF01226 Formate/nitrite transporter JKJ11_11065 PF03466 LysR substrate binding domain JKJ11_11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_11075 PF00265 Thymidine kinase JKJ11_11080 PF01406 tRNA synthetases class I (C) catalytic domain JKJ11_11080 PF09190 DALR domain JKJ11_11085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JKJ11_11090 PF00149 Calcineurin-like phosphoesterase JKJ11_11095 PF08668 HDOD domain JKJ11_11095 PF00563 EAL domain JKJ11_11100 PF02810 SEC-C motif JKJ11_11115 PF11842 Domain of unknown function (DUF3362) JKJ11_11115 PF08497 Radical SAM N-terminal JKJ11_11115 PF04055 Radical SAM superfamily JKJ11_11120 PF01740 STAS domain JKJ11_11130 PF02563 Polysaccharide biosynthesis/export protein JKJ11_11130 PF10531 SLBB domain JKJ11_11140 PF02954 Bacterial regulatory protein, Fis family JKJ11_11140 PF00072 Response regulator receiver domain JKJ11_11140 PF00158 Sigma-54 interaction domain JKJ11_11145 PF13439 Glycosyltransferase Family 4 JKJ11_11145 PF00534 Glycosyl transferases group 1 JKJ11_11175 PF13439 Glycosyltransferase Family 4 JKJ11_11175 PF00534 Glycosyl transferases group 1 JKJ11_11180 PF00535 Glycosyl transferase family 2 JKJ11_11185 PF02397 Bacterial sugar transferase JKJ11_11195 PF00892 EamA-like transporter family JKJ11_11200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JKJ11_11205 PF01522 Polysaccharide deacetylase JKJ11_11210 PF00551 Formyl transferase JKJ11_11210 PF02911 Formyl transferase, C-terminal domain JKJ11_11210 PF01370 NAD dependent epimerase/dehydratase family JKJ11_11215 PF00535 Glycosyl transferase family 2 JKJ11_11220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JKJ11_11235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JKJ11_11255 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JKJ11_11260 PF13609 Gram-negative porin JKJ11_11265 PF06733 DEAD_2 JKJ11_11265 PF13307 Helicase C-terminal domain JKJ11_11270 PF01925 Sulfite exporter TauE/SafE JKJ11_11280 PF10689 Protein of unknown function (DUF2496) JKJ11_11285 PF04310 MukB N-terminal JKJ11_11285 PF16330 MukB hinge domain JKJ11_11290 PF04288 MukE-like family JKJ11_11295 PF03882 MukF winged-helix domain JKJ11_11295 PF17193 MukF C-terminal domain JKJ11_11295 PF17192 MukF middle domain JKJ11_11300 PF13847 Methyltransferase domain JKJ11_11305 PF02698 DUF218 domain JKJ11_11310 PF00072 Response regulator receiver domain JKJ11_11310 PF00486 Transcriptional regulatory protein, C terminal JKJ11_11315 PF02613 Nitrate reductase delta subunit JKJ11_11320 PF00356 Bacterial regulatory proteins, lacI family JKJ11_11325 PF04994 TfoX C-terminal domain JKJ11_11325 PF04993 TfoX N-terminal domain JKJ11_11345 PF08323 Starch synthase catalytic domain JKJ11_11345 PF00534 Glycosyl transferases group 1 JKJ11_11350 PF00483 Nucleotidyl transferase JKJ11_11355 PF08272 Topoisomerase I zinc-ribbon-like JKJ11_11355 PF01131 DNA topoisomerase JKJ11_11355 PF01751 Toprim domain JKJ11_11355 PF01396 Topoisomerase DNA binding C4 zinc finger JKJ11_11360 PF10692 Protein of unknown function (DUF2498) JKJ11_11365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JKJ11_11370 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JKJ11_11375 PF04376 Arginine-tRNA-protein transferase, N terminus JKJ11_11375 PF04377 Arginine-tRNA-protein transferase, C terminus JKJ11_11380 PF01176 Translation initiation factor 1A / IF-1 JKJ11_11385 PF02861 Clp amino terminal domain, pathogenicity island component JKJ11_11385 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_11385 PF07724 AAA domain (Cdc48 subfamily) JKJ11_11385 PF17871 AAA lid domain JKJ11_11385 PF10431 C-terminal, D2-small domain, of ClpB protein JKJ11_11390 PF02617 ATP-dependent Clp protease adaptor protein ClpS JKJ11_11395 PF00313 'Cold-shock' DNA-binding domain JKJ11_11400 PF03971 Monomeric isocitrate dehydrogenase JKJ11_11405 PF00849 RNA pseudouridylate synthase JKJ11_11410 PF02348 Cytidylyltransferase JKJ11_11415 PF03966 Trm112p-like protein JKJ11_11420 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JKJ11_11425 PF00664 ABC transporter transmembrane region JKJ11_11425 PF00005 ABC transporter JKJ11_11430 PF13567 Domain of unknown function (DUF4131) JKJ11_11430 PF00753 Metallo-beta-lactamase superfamily JKJ11_11430 PF03772 Competence protein JKJ11_11440 PF12704 MacB-like periplasmic core domain JKJ11_11440 PF02687 FtsX-like permease family JKJ11_11445 PF00005 ABC transporter JKJ11_11450 PF02687 FtsX-like permease family JKJ11_11450 PF12704 MacB-like periplasmic core domain JKJ11_11460 PF17757 UvrB interaction domain JKJ11_11460 PF03461 TRCF domain JKJ11_11460 PF00271 Helicase conserved C-terminal domain JKJ11_11460 PF00270 DEAD/DEAH box helicase JKJ11_11460 PF02559 CarD-like/TRCF domain JKJ11_11475 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_11480 PF02368 Bacterial Ig-like domain (group 2) JKJ11_11480 PF11999 Protein of unknown function (DUF3494) JKJ11_11485 PF00691 OmpA family JKJ11_11485 PF01389 OmpA-like transmembrane domain JKJ11_11490 PF05728 Uncharacterised protein family (UPF0227) JKJ11_11500 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JKJ11_11500 PF13036 Peptidoglycan-synthase activator LpoB JKJ11_11505 PF07233 Protein of unknown function (DUF1425) JKJ11_11515 PF01230 HIT domain JKJ11_11520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_11520 PF00672 HAMP domain JKJ11_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_11535 PF03466 LysR substrate binding domain JKJ11_11540 PF00171 Aldehyde dehydrogenase family JKJ11_11545 PF00871 Acetokinase family JKJ11_11550 PF01515 Phosphate acetyl/butaryl transferase JKJ11_11555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JKJ11_11555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JKJ11_11565 PF01048 Phosphorylase superfamily JKJ11_11570 PF00403 Heavy-metal-associated domain JKJ11_11575 PF01554 MatE JKJ11_11580 PF01743 Poly A polymerase head domain JKJ11_11580 PF01368 DHH family JKJ11_11580 PF00571 CBS domain JKJ11_11580 PF02272 DHHA1 domain JKJ11_11590 PF00069 Protein kinase domain JKJ11_11595 PF07690 Major Facilitator Superfamily JKJ11_11605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JKJ11_11605 PF04324 BFD-like [2Fe-2S] binding domain JKJ11_11605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JKJ11_11605 PF18267 Rubredoxin NAD+ reductase C-terminal domain JKJ11_11605 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_11610 PF10414 Sirohaem synthase dimerisation region JKJ11_11610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JKJ11_11615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_11615 PF00384 Molybdopterin oxidoreductase JKJ11_11615 PF01568 Molydopterin dinucleotide binding domain JKJ11_11615 PF04324 BFD-like [2Fe-2S] binding domain JKJ11_11620 PF02080 TrkA-C domain JKJ11_11620 PF02254 TrkA-N domain JKJ11_11625 PF02386 Cation transport protein JKJ11_11630 PF02885 Glycosyl transferase family, helical bundle domain JKJ11_11630 PF00591 Glycosyl transferase family, a/b domain JKJ11_11645 PF02391 MoaE protein JKJ11_11650 PF02597 ThiS family JKJ11_11655 PF01967 MoaC family JKJ11_11660 PF00994 Probable molybdopterin binding domain JKJ11_11665 PF06463 Molybdenum Cofactor Synthesis C JKJ11_11665 PF04055 Radical SAM superfamily JKJ11_11670 PF01933 Uncharacterised protein family UPF0052 JKJ11_11675 PF01627 Hpt domain JKJ11_11680 PF02954 Bacterial regulatory protein, Fis family JKJ11_11680 PF00072 Response regulator receiver domain JKJ11_11680 PF00158 Sigma-54 interaction domain JKJ11_11685 PF17757 UvrB interaction domain JKJ11_11685 PF04851 Type III restriction enzyme, res subunit JKJ11_11685 PF02151 UvrB/uvrC motif JKJ11_11685 PF00271 Helicase conserved C-terminal domain JKJ11_11685 PF12344 Ultra-violet resistance protein B JKJ11_11695 PF02508 Rnf-Nqr subunit, membrane protein JKJ11_11700 PF04060 Putative Fe-S cluster JKJ11_11705 PF13375 RnfC Barrel sandwich hybrid domain JKJ11_11705 PF12838 4Fe-4S dicluster domain JKJ11_11705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JKJ11_11705 PF10531 SLBB domain JKJ11_11710 PF03116 NQR2, RnfD, RnfE family JKJ11_11715 PF04205 FMN-binding domain JKJ11_11720 PF02508 Rnf-Nqr subunit, membrane protein JKJ11_11725 PF10576 Iron-sulfur binding domain of endonuclease III JKJ11_11725 PF00633 Helix-hairpin-helix motif JKJ11_11725 PF00730 HhH-GPD superfamily base excision DNA repair protein JKJ11_11730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_11735 PF18393 MotY N-terminal domain JKJ11_11735 PF00691 OmpA family JKJ11_11740 PF00929 Exonuclease JKJ11_11745 PF13726 Na+-H+ antiporter family JKJ11_11745 PF03553 Na+/H+ antiporter family JKJ11_11750 PF00462 Glutaredoxin JKJ11_11755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JKJ11_11755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JKJ11_11770 PF00171 Aldehyde dehydrogenase family JKJ11_11770 PF00465 Iron-containing alcohol dehydrogenase JKJ11_11775 PF01914 MarC family integral membrane protein JKJ11_11780 PF00027 Cyclic nucleotide-binding domain JKJ11_11780 PF00520 Ion transport protein JKJ11_11785 PF01118 Semialdehyde dehydrogenase, NAD binding domain JKJ11_11785 PF02774 Semialdehyde dehydrogenase, dimerisation domain JKJ11_11800 PF04245 37-kD nucleoid-associated bacterial protein JKJ11_11805 PF07208 Protein of unknown function (DUF1414) JKJ11_11810 PF11893 Domain of unknown function (DUF3413) JKJ11_11810 PF00884 Sulfatase JKJ11_11830 PF00293 NUDIX domain JKJ11_11835 PF00850 Histone deacetylase domain JKJ11_11840 PF00106 short chain dehydrogenase JKJ11_11845 PF01131 DNA topoisomerase JKJ11_11845 PF01751 Toprim domain JKJ11_11850 PF00881 Nitroreductase family JKJ11_11855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JKJ11_11855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_11860 PF01343 Peptidase family S49 JKJ11_11865 PF00710 Asparaginase, N-terminal JKJ11_11865 PF17763 Glutaminase/Asparaginase C-terminal domain JKJ11_11870 PF01451 Low molecular weight phosphotyrosine protein phosphatase JKJ11_11875 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JKJ11_11875 PF12557 Cob(I)alamin adenosyltransferase N terminal JKJ11_11880 PF07670 Nucleoside recognition JKJ11_11880 PF07662 Na+ dependent nucleoside transporter C-terminus JKJ11_11880 PF01773 Na+ dependent nucleoside transporter N-terminus JKJ11_11890 PF05170 AsmA family JKJ11_11895 PF00485 Phosphoribulokinase / Uridine kinase family JKJ11_11900 PF10609 NUBPL iron-transfer P-loop NTPase JKJ11_11905 PF09334 tRNA synthetases class I (M) JKJ11_11905 PF01588 Putative tRNA binding domain JKJ11_11915 PF00392 Bacterial regulatory proteins, gntR family JKJ11_11915 PF07840 FadR C-terminal domain JKJ11_11920 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JKJ11_11925 PF02600 Disulfide bond formation protein DsbB JKJ11_11930 PF07517 SecA DEAD-like domain JKJ11_11930 PF01043 SecA preprotein cross-linking domain JKJ11_11930 PF02810 SEC-C motif JKJ11_11930 PF07516 SecA Wing and Scaffold domain JKJ11_11935 PF01207 Dihydrouridine synthase (Dus) JKJ11_11940 PF02903 Alpha amylase, N-terminal ig-like domain JKJ11_11940 PF00128 Alpha amylase, catalytic domain JKJ11_11945 PF00005 ABC transporter JKJ11_11950 PF02653 Branched-chain amino acid transport system / permease component JKJ11_11960 PF07995 Glucose / Sorbosone dehydrogenase JKJ11_11965 PF04217 Protein of unknown function, DUF412 JKJ11_11970 PF00871 Acetokinase family JKJ11_11975 PF07085 DRTGG domain JKJ11_11975 PF01515 Phosphate acetyl/butaryl transferase JKJ11_11980 PF13409 Glutathione S-transferase, N-terminal domain JKJ11_11985 PF00005 ABC transporter JKJ11_11985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_11990 PF00005 ABC transporter JKJ11_11990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_11995 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_11995 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_12000 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_12005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_12010 PF00196 Bacterial regulatory proteins, luxR family JKJ11_12010 PF00072 Response regulator receiver domain JKJ11_12015 PF00501 AMP-binding enzyme JKJ11_12015 PF13193 AMP-binding enzyme C-terminal domain JKJ11_12025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JKJ11_12030 PF12833 Helix-turn-helix domain JKJ11_12035 PF07715 TonB-dependent Receptor Plug Domain JKJ11_12035 PF00593 TonB dependent receptor JKJ11_12045 PF08891 YfcL protein JKJ11_12050 PF04315 Elongation factor P hydroxylase JKJ11_12055 PF03458 UPF0126 domain JKJ11_12065 PF03144 Elongation factor Tu domain 2 JKJ11_12065 PF03764 Elongation factor G, domain IV JKJ11_12065 PF00009 Elongation factor Tu GTP binding domain JKJ11_12065 PF14492 Elongation Factor G, domain II JKJ11_12065 PF00679 Elongation factor G C-terminus JKJ11_12070 PF01264 Chorismate synthase JKJ11_12075 PF05175 Methyltransferase small domain JKJ11_12080 PF01713 Smr domain JKJ11_12085 PF00300 Histidine phosphatase superfamily (branch 1) JKJ11_12090 PF05193 Peptidase M16 inactive domain JKJ11_12090 PF16187 Middle or third domain of peptidase_M16 JKJ11_12090 PF00675 Insulinase (Peptidase family M16) JKJ11_12095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JKJ11_12095 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_12095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JKJ11_12100 PF02803 Thiolase, C-terminal domain JKJ11_12100 PF00108 Thiolase, N-terminal domain JKJ11_12105 PF08281 Sigma-70, region 4 JKJ11_12105 PF04542 Sigma-70 region 2 JKJ11_12115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JKJ11_12120 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JKJ11_12125 PF04333 MlaA lipoprotein JKJ11_12130 PF03918 Cytochrome C biogenesis protein JKJ11_12135 PF03918 Cytochrome C biogenesis protein JKJ11_12140 PF08534 Redoxin JKJ11_12145 PF01578 Cytochrome C assembly protein JKJ11_12145 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JKJ11_12150 PF03100 CcmE JKJ11_12155 PF04995 Heme exporter protein D (CcmD) JKJ11_12160 PF01578 Cytochrome C assembly protein JKJ11_12165 PF03379 CcmB protein JKJ11_12170 PF00005 ABC transporter JKJ11_12180 PF01584 CheW-like domain JKJ11_12190 PF13614 AAA domain JKJ11_12195 PF00072 Response regulator receiver domain JKJ11_12195 PF01339 CheB methylesterase JKJ11_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_12200 PF00072 Response regulator receiver domain JKJ11_12200 PF01584 CheW-like domain JKJ11_12200 PF02895 Signal transducing histidine kinase, homodimeric domain JKJ11_12200 PF01627 Hpt domain JKJ11_12205 PF04344 Chemotaxis phosphatase, CheZ JKJ11_12210 PF00072 Response regulator receiver domain JKJ11_12215 PF04545 Sigma-70, region 4 JKJ11_12215 PF04539 Sigma-70 region 3 JKJ11_12215 PF04542 Sigma-70 region 2 JKJ11_12220 PF10609 NUBPL iron-transfer P-loop NTPase JKJ11_12225 PF00448 SRP54-type protein, GTPase domain JKJ11_12230 PF00771 FHIPEP family JKJ11_12235 PF01312 FlhB HrpN YscU SpaS Family JKJ11_12240 PF01311 Bacterial export proteins, family 1 JKJ11_12245 PF01313 Bacterial export proteins, family 3 JKJ11_12250 PF00813 FliP family JKJ11_12255 PF04347 Flagellar biosynthesis protein, FliO JKJ11_12260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JKJ11_12265 PF02154 Flagellar motor switch protein FliM JKJ11_12265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JKJ11_12285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_12285 PF18269 T3SS EscN ATPase C-terminal domain JKJ11_12295 PF01706 FliG C-terminal domain JKJ11_12295 PF14841 FliG middle domain JKJ11_12295 PF14842 FliG N-terminal domain JKJ11_12300 PF01514 Secretory protein of YscJ/FliF family JKJ11_12300 PF08345 Flagellar M-ring protein C-terminal JKJ11_12305 PF02049 Flagellar hook-basal body complex protein FliE JKJ11_12310 PF02954 Bacterial regulatory protein, Fis family JKJ11_12310 PF00072 Response regulator receiver domain JKJ11_12310 PF00158 Sigma-54 interaction domain JKJ11_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_12315 PF13188 PAS domain JKJ11_12315 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_12320 PF00158 Sigma-54 interaction domain JKJ11_12320 PF06490 Flagellar regulatory protein FleQ JKJ11_12320 PF02954 Bacterial regulatory protein, Fis family JKJ11_12325 PF02561 Flagellar protein FliS JKJ11_12335 PF07195 Flagellar hook-associated protein 2 C-terminus JKJ11_12335 PF02465 Flagellar hook-associated protein 2 N-terminus JKJ11_12335 PF07196 Flagellin hook IN motif JKJ11_12340 PF03646 FlaG protein JKJ11_12345 PF00700 Bacterial flagellin C-terminal helical region JKJ11_12345 PF07196 Flagellin hook IN motif JKJ11_12345 PF00669 Bacterial flagellin N-terminal helical region JKJ11_12350 PF00700 Bacterial flagellin C-terminal helical region JKJ11_12350 PF00669 Bacterial flagellin N-terminal helical region JKJ11_12350 PF07196 Flagellin hook IN motif JKJ11_12355 PF00669 Bacterial flagellin N-terminal helical region JKJ11_12355 PF07196 Flagellin hook IN motif JKJ11_12355 PF00700 Bacterial flagellin C-terminal helical region JKJ11_12365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_12365 PF07196 Flagellin hook IN motif JKJ11_12370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JKJ11_12370 PF10135 Rod binding protein JKJ11_12375 PF02119 Flagellar P-ring protein JKJ11_12380 PF02107 Flagellar L-ring protein JKJ11_12385 PF00460 Flagella basal body rod protein JKJ11_12385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_12390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_12390 PF00460 Flagella basal body rod protein JKJ11_12395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_12395 PF00460 Flagella basal body rod protein JKJ11_12395 PF07559 Flagellar basal body protein FlaE JKJ11_12400 PF13861 FlgD Tudor-like domain JKJ11_12400 PF03963 Flagellar hook capping protein - N-terminal region JKJ11_12400 PF13860 FlgD Ig-like domain JKJ11_12405 PF00460 Flagella basal body rod protein JKJ11_12405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JKJ11_12410 PF00460 Flagella basal body rod protein JKJ11_12415 PF03705 CheR methyltransferase, all-alpha domain JKJ11_12415 PF01739 CheR methyltransferase, SAM binding domain JKJ11_12420 PF00072 Response regulator receiver domain JKJ11_12420 PF01584 CheW-like domain JKJ11_12485 PF01810 LysE type translocator JKJ11_12495 PF01638 HxlR-like helix-turn-helix JKJ11_12510 PF00082 Subtilase family JKJ11_12510 PF05922 Peptidase inhibitor I9 JKJ11_12510 PF00082 Subtilase family JKJ11_12510 PF05922 Peptidase inhibitor I9 JKJ11_12520 PF01047 MarR family JKJ11_12530 PF01098 Cell cycle protein JKJ11_12535 PF09335 SNARE associated Golgi protein JKJ11_12545 PF04076 Bacterial OB fold (BOF) protein JKJ11_12550 PF13580 SIS domain JKJ11_12560 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JKJ11_12560 PF01464 Transglycosylase SLT domain JKJ11_12565 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_12575 PF03466 LysR substrate binding domain JKJ11_12580 PF07690 Major Facilitator Superfamily JKJ11_12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_12585 PF07730 Histidine kinase JKJ11_12585 PF05231 MASE1 JKJ11_12590 PF00196 Bacterial regulatory proteins, luxR family JKJ11_12590 PF00072 Response regulator receiver domain JKJ11_12595 PF07690 Major Facilitator Superfamily JKJ11_12600 PF00155 Aminotransferase class I and II JKJ11_12605 PF03553 Na+/H+ antiporter family JKJ11_12610 PF00356 Bacterial regulatory proteins, lacI family JKJ11_12615 PF00270 DEAD/DEAH box helicase JKJ11_12615 PF00271 Helicase conserved C-terminal domain JKJ11_12625 PF01769 Divalent cation transporter JKJ11_12625 PF03448 MgtE intracellular N domain JKJ11_12625 PF00571 CBS domain JKJ11_12635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_12645 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_12650 PF04962 KduI/IolB family JKJ11_12655 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_12670 PF01553 Acyltransferase JKJ11_12675 PF04608 Phosphatidylglycerophosphatase A JKJ11_12680 PF00586 AIR synthase related protein, N-terminal domain JKJ11_12680 PF02769 AIR synthase related protein, C-terminal domain JKJ11_12685 PF01029 NusB family JKJ11_12690 PF00885 6,7-dimethyl-8-ribityllumazine synthase JKJ11_12695 PF00925 GTP cyclohydrolase II JKJ11_12695 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JKJ11_12700 PF00677 Lumazine binding domain JKJ11_12705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JKJ11_12705 PF01872 RibD C-terminal domain JKJ11_12710 PF03477 ATP cone domain JKJ11_12715 PF00849 RNA pseudouridylate synthase JKJ11_12720 PF04287 tRNA pseudouridine synthase C JKJ11_12745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JKJ11_12750 PF00171 Aldehyde dehydrogenase family JKJ11_12755 PF00696 Amino acid kinase family JKJ11_12755 PF01472 PUA domain JKJ11_12760 PF07417 Sigma factor-binding transcriptional regulator Crl JKJ11_12765 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JKJ11_12770 PF00156 Phosphoribosyl transferase domain JKJ11_12775 PF00860 Permease family JKJ11_12780 PF07687 Peptidase dimerisation domain JKJ11_12780 PF01546 Peptidase family M20/M25/M40 JKJ11_12785 PF06786 Uncharacterised protein family (UPF0253) JKJ11_12795 PF00209 Sodium:neurotransmitter symporter family JKJ11_12805 PF03449 Transcription elongation factor, N-terminal JKJ11_12805 PF01272 Transcription elongation factor, GreA/GreB, C-term JKJ11_12810 PF11799 impB/mucB/samB family C-terminal domain JKJ11_12810 PF00817 impB/mucB/samB family JKJ11_12815 PF04400 (Na+)-NQR maturation NqrM JKJ11_12820 PF02424 ApbE family JKJ11_12825 PF00970 Oxidoreductase FAD-binding domain JKJ11_12825 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_12825 PF00175 Oxidoreductase NAD-binding domain JKJ11_12830 PF02508 Rnf-Nqr subunit, membrane protein JKJ11_12835 PF02508 Rnf-Nqr subunit, membrane protein JKJ11_12840 PF04205 FMN-binding domain JKJ11_12845 PF03116 NQR2, RnfD, RnfE family JKJ11_12850 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JKJ11_12850 PF11973 NQRA C-terminal domain JKJ11_12855 PF01722 BolA-like protein JKJ11_12860 PF05175 Methyltransferase small domain JKJ11_12870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JKJ11_12875 PF07690 Major Facilitator Superfamily JKJ11_12885 PF04545 Sigma-70, region 4 JKJ11_12885 PF04542 Sigma-70 region 2 JKJ11_12895 PF03502 Nucleoside-specific channel-forming protein, Tsx JKJ11_12900 PF08546 Ketopantoate reductase PanE/ApbA C terminal JKJ11_12900 PF02558 Ketopantoate reductase PanE/ApbA JKJ11_12905 PF01965 DJ-1/PfpI family JKJ11_12910 PF00266 Aminotransferase class-V JKJ11_12915 PF02657 Fe-S metabolism associated domain JKJ11_12920 PF00899 ThiF family JKJ11_12925 PF06725 3D domain JKJ11_12925 PF03562 MltA specific insert domain JKJ11_12935 PF00696 Amino acid kinase family JKJ11_12935 PF00583 Acetyltransferase (GNAT) family JKJ11_12945 PF13538 UvrD-like helicase C-terminal domain JKJ11_12950 PF13361 UvrD-like helicase C-terminal domain JKJ11_12950 PF12705 PD-(D/E)XK nuclease superfamily JKJ11_12950 PF00580 UvrD/REP helicase N-terminal domain JKJ11_12955 PF17946 RecC C-terminal domain JKJ11_12965 PF03466 LysR substrate binding domain JKJ11_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_12970 PF07130 YebG protein JKJ11_12975 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JKJ11_12975 PF14602 Hexapeptide repeat of succinyl-transferase JKJ11_12980 PF02357 Transcription termination factor nusG JKJ11_12985 PF00854 POT family JKJ11_12990 PF00762 Ferrochelatase JKJ11_12995 PF05191 Adenylate kinase, active site lid JKJ11_13000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_13000 PF00183 Hsp90 protein JKJ11_13005 PF00486 Transcriptional regulatory protein, C terminal JKJ11_13010 PF17323 Trans-membrane regulatory protein ToxS JKJ11_13015 PF07196 Flagellin hook IN motif JKJ11_13015 PF00669 Bacterial flagellin N-terminal helical region JKJ11_13015 PF00700 Bacterial flagellin C-terminal helical region JKJ11_13020 PF00700 Bacterial flagellin C-terminal helical region JKJ11_13020 PF07196 Flagellin hook IN motif JKJ11_13020 PF00669 Bacterial flagellin N-terminal helical region JKJ11_13025 PF04261 Dyp-type peroxidase family JKJ11_13030 PF11143 Protein of unknown function (DUF2919) JKJ11_13050 PF03960 ArsC family JKJ11_13055 PF07687 Peptidase dimerisation domain JKJ11_13055 PF01546 Peptidase family M20/M25/M40 JKJ11_13060 PF02557 D-alanyl-D-alanine carboxypeptidase JKJ11_13070 PF06804 NlpB/DapX lipoprotein JKJ11_13075 PF00701 Dihydrodipicolinate synthetase family JKJ11_13080 PF01842 ACT domain JKJ11_13110 PF00578 AhpC/TSA family JKJ11_13125 PF04851 Type III restriction enzyme, res subunit JKJ11_13155 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_13155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_13165 PF04143 Sulphur transport JKJ11_13180 PF00873 AcrB/AcrD/AcrF family JKJ11_13195 PF02321 Outer membrane efflux protein JKJ11_13220 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_13220 PF13426 PAS domain JKJ11_13220 PF08448 PAS fold JKJ11_13220 PF00563 EAL domain JKJ11_13220 PF08447 PAS fold JKJ11_13220 PF05231 MASE1 JKJ11_13225 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_13225 PF00563 EAL domain JKJ11_13225 PF03707 Bacterial signalling protein N terminal repeat JKJ11_13235 PF01594 AI-2E family transporter JKJ11_13245 PF01435 Peptidase family M48 JKJ11_13245 PF13181 Tetratricopeptide repeat JKJ11_13250 PF03960 ArsC family JKJ11_13255 PF03358 NADPH-dependent FMN reductase JKJ11_13270 PF00860 Permease family JKJ11_13280 PF02769 AIR synthase related protein, C-terminal domain JKJ11_13280 PF00586 AIR synthase related protein, N-terminal domain JKJ11_13285 PF00551 Formyl transferase JKJ11_13290 PF13230 Glutamine amidotransferases class-II JKJ11_13295 PF13580 SIS domain JKJ11_13300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JKJ11_13300 PF02770 Acyl-CoA dehydrogenase, middle domain JKJ11_13300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JKJ11_13300 PF09317 Domain of unknown function (DUF1974) JKJ11_13310 PF00929 Exonuclease JKJ11_13315 PF00075 RNase H JKJ11_13320 PF08241 Methyltransferase domain JKJ11_13325 PF16123 Hydroxyacylglutathione hydrolase C-terminus JKJ11_13330 PF01476 LysM domain JKJ11_13330 PF01464 Transglycosylase SLT domain JKJ11_13340 PF00543 Nitrogen regulatory protein P-II JKJ11_13345 PF00034 Cytochrome c JKJ11_13350 PF01171 PP-loop family JKJ11_13350 PF09179 TilS substrate binding domain JKJ11_13350 PF11734 TilS substrate C-terminal domain JKJ11_13355 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JKJ11_13360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JKJ11_13360 PF14579 Helix-hairpin-helix motif JKJ11_13360 PF02811 PHP domain JKJ11_13360 PF01336 OB-fold nucleic acid binding domain JKJ11_13360 PF07733 Bacterial DNA polymerase III alpha NTPase domain JKJ11_13365 PF01351 Ribonuclease HII JKJ11_13370 PF02684 Lipid-A-disaccharide synthetase JKJ11_13375 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_13375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JKJ11_13380 PF07977 FabA-like domain JKJ11_13385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JKJ11_13385 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_13390 PF03938 Outer membrane protein (OmpH-like) JKJ11_13395 PF01103 Surface antigen JKJ11_13395 PF07244 Surface antigen variable number repeat JKJ11_13400 PF17820 PDZ domain JKJ11_13400 PF02163 Peptidase family M50 JKJ11_13405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JKJ11_13405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JKJ11_13405 PF13288 DXP reductoisomerase C-terminal domain JKJ11_13415 PF01255 Putative undecaprenyl diphosphate synthase JKJ11_13420 PF01765 Ribosome recycling factor JKJ11_13425 PF00696 Amino acid kinase family JKJ11_13430 PF00889 Elongation factor TS JKJ11_13435 PF00318 Ribosomal protein S2 JKJ11_13440 PF00557 Metallopeptidase family M24 JKJ11_13445 PF01966 HD domain JKJ11_13445 PF01909 Nucleotidyltransferase domain JKJ11_13445 PF01842 ACT domain JKJ11_13445 PF08335 GlnD PII-uridylyltransferase JKJ11_13450 PF11944 Protein of unknown function (DUF3461) JKJ11_13455 PF03806 AbgT putative transporter family JKJ11_13460 PF01980 tRNA-methyltransferase O JKJ11_13460 PF18389 TrmO C-terminal domain JKJ11_13465 PF03129 Anticodon binding domain JKJ11_13465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JKJ11_13465 PF04073 Aminoacyl-tRNA editing domain JKJ11_13480 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JKJ11_13480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JKJ11_13480 PF02769 AIR synthase related protein, C-terminal domain JKJ11_13485 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_13485 PF01464 Transglycosylase SLT domain JKJ11_13495 PF14437 MafB19-like deaminase JKJ11_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_13500 PF03466 LysR substrate binding domain JKJ11_13505 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_13505 PF00107 Zinc-binding dehydrogenase JKJ11_13510 PF00756 Putative esterase JKJ11_13515 PF03806 AbgT putative transporter family JKJ11_13520 PF07963 Prokaryotic N-terminal methylation motif JKJ11_13520 PF02501 Type II secretion system (T2SS), protein I JKJ11_13545 PF00226 DnaJ domain JKJ11_13545 PF01556 DnaJ C terminal domain JKJ11_13545 PF00684 DnaJ central domain JKJ11_13550 PF00012 Hsp70 protein JKJ11_13555 PF00375 Sodium:dicarboxylate symporter family JKJ11_13560 PF01025 GrpE JKJ11_13565 PF01513 ATP-NAD kinase JKJ11_13570 PF02463 RecF/RecN/SMC N terminal domain JKJ11_13575 PF04355 SmpA / OmlA family JKJ11_13580 PF03658 RnfH family Ubiquitin JKJ11_13585 PF03364 Polyketide cyclase / dehydrase and lipid transport JKJ11_13590 PF01668 SmpB protein JKJ11_13600 PF12805 FUSC-like inner membrane protein yccS JKJ11_13625 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JKJ11_13630 PF08329 Chitinase A, N-terminal domain JKJ11_13630 PF00704 Glycosyl hydrolases family 18 JKJ11_13635 PF08543 Phosphomethylpyrimidine kinase JKJ11_13640 PF00005 ABC transporter JKJ11_13645 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_13650 PF09084 NMT1/THI5 like JKJ11_13655 PF03070 TENA/THI-4/PQQC family JKJ11_13660 PF01235 Sodium:alanine symporter family JKJ11_13665 PF01184 GPR1/FUN34/yaaH family JKJ11_13670 PF00117 Glutamine amidotransferase class-I JKJ11_13670 PF00958 GMP synthase C terminal domain JKJ11_13670 PF02540 NAD synthase JKJ11_13675 PF00478 IMP dehydrogenase / GMP reductase domain JKJ11_13675 PF00571 CBS domain JKJ11_13680 PF02601 Exonuclease VII, large subunit JKJ11_13680 PF13742 OB-fold nucleic acid binding domain JKJ11_13690 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_13700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JKJ11_13700 PF01926 50S ribosome-binding GTPase JKJ11_13705 PF13360 PQQ-like domain JKJ11_13710 PF09976 Tetratricopeptide repeat-like domain JKJ11_13715 PF13393 Histidyl-tRNA synthetase JKJ11_13715 PF03129 Anticodon binding domain JKJ11_13720 PF04551 GcpE protein JKJ11_13725 PF13464 Domain of unknown function (DUF4115) JKJ11_13730 PF04055 Radical SAM superfamily JKJ11_13735 PF00334 Nucleoside diphosphate kinase JKJ11_13740 PF12404 Peptidase JKJ11_13740 PF00883 Cytosol aminopeptidase family, catalytic domain JKJ11_13745 PF04384 Iron-sulphur cluster assembly JKJ11_13750 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_13755 PF00012 Hsp70 protein JKJ11_13760 PF00226 DnaJ domain JKJ11_13760 PF07743 HSCB C-terminal oligomerisation domain JKJ11_13765 PF01521 Iron-sulphur cluster biosynthesis JKJ11_13770 PF01592 NifU-like N terminal domain JKJ11_13775 PF00266 Aminotransferase class-V JKJ11_13780 PF02082 Transcriptional regulator JKJ11_13785 PF00588 SpoU rRNA Methylase family JKJ11_13790 PF00459 Inositol monophosphatase family JKJ11_13795 PF07549 SecD/SecF GG Motif JKJ11_13795 PF02355 Protein export membrane protein JKJ11_13800 PF13721 SecD export protein N-terminal TM region JKJ11_13800 PF02355 Protein export membrane protein JKJ11_13800 PF07549 SecD/SecF GG Motif JKJ11_13805 PF02699 Preprotein translocase subunit JKJ11_13810 PF01702 Queuine tRNA-ribosyltransferase JKJ11_13815 PF02547 Queuosine biosynthesis protein JKJ11_13820 PF00571 CBS domain JKJ11_13825 PF03466 LysR substrate binding domain JKJ11_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_13830 PF00578 AhpC/TSA family JKJ11_13830 PF10417 C-terminal domain of 1-Cys peroxiredoxin JKJ11_13835 PF03932 CutC family JKJ11_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_13840 PF03466 LysR substrate binding domain JKJ11_13850 PF01895 PhoU domain JKJ11_13855 PF00005 ABC transporter JKJ11_13860 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_13865 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_13870 PF02503 Polyphosphate kinase middle domain JKJ11_13870 PF13090 Polyphosphate kinase C-terminal domain 2 JKJ11_13870 PF17941 Polyphosphate kinase C-terminal domain 1 JKJ11_13870 PF13089 Polyphosphate kinase N-terminal domain JKJ11_13875 PF02541 Ppx/GppA phosphatase family JKJ11_13880 PF12849 PBP superfamily domain JKJ11_13885 PF00989 PAS fold JKJ11_13885 PF11808 Phosphate regulon sensor protein PhoR JKJ11_13885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_13885 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_13890 PF00072 Response regulator receiver domain JKJ11_13890 PF00486 Transcriptional regulatory protein, C terminal JKJ11_13895 PF04381 Putative exonuclease, RdgC JKJ11_13900 PF01136 Peptidase family U32 JKJ11_13900 PF16325 Peptidase family U32 C-terminal domain JKJ11_13905 PF00037 4Fe-4S binding domain JKJ11_13955 PF10431 C-terminal, D2-small domain, of ClpB protein JKJ11_13955 PF02861 Clp amino terminal domain, pathogenicity island component JKJ11_13955 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_13955 PF07724 AAA domain (Cdc48 subfamily) JKJ11_13955 PF17871 AAA lid domain JKJ11_13960 PF02578 Multi-copper polyphenol oxidoreductase laccase JKJ11_13965 PF00849 RNA pseudouridylate synthase JKJ11_13965 PF01479 S4 domain JKJ11_13970 PF13525 Outer membrane lipoprotein JKJ11_13975 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_13975 PF01464 Transglycosylase SLT domain JKJ11_13980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JKJ11_13985 PF01817 Chorismate mutase type II JKJ11_13985 PF00800 Prephenate dehydratase JKJ11_13990 PF00691 OmpA family JKJ11_13990 PF01389 OmpA-like transmembrane domain JKJ11_13995 PF01931 Protein of unknown function DUF84 JKJ11_14000 PF01371 Trp repressor protein JKJ11_14005 PF01464 Transglycosylase SLT domain JKJ11_14005 PF14718 Soluble lytic murein transglycosylase L domain JKJ11_14010 PF00005 ABC transporter JKJ11_14010 PF12848 ABC transporter JKJ11_14015 PF04225 Opacity-associated protein A LysM-like domain JKJ11_14015 PF01551 Peptidase family M23 JKJ11_14020 PF01817 Chorismate mutase type II JKJ11_14020 PF02153 Prephenate dehydrogenase JKJ11_14025 PF00793 DAHP synthetase I family JKJ11_14030 PF07694 5TMR of 5TMR-LYT JKJ11_14030 PF06580 Histidine kinase JKJ11_14035 PF04397 LytTr DNA-binding domain JKJ11_14035 PF00072 Response regulator receiver domain JKJ11_14040 PF00933 Glycosyl hydrolase family 3 N terminal domain JKJ11_14045 PF03702 Anhydro-N-acetylmuramic acid kinase JKJ11_14050 PF01380 SIS domain JKJ11_14060 PF02554 Carbon starvation protein CstA JKJ11_14065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JKJ11_14065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JKJ11_14070 PF00797 N-acetyltransferase JKJ11_14075 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_14075 PF14821 Threonine synthase N terminus JKJ11_14080 PF08544 GHMP kinases C terminal JKJ11_14080 PF00288 GHMP kinases N terminal domain JKJ11_14085 PF13840 ACT domain JKJ11_14085 PF01842 ACT domain JKJ11_14085 PF00742 Homoserine dehydrogenase JKJ11_14085 PF00696 Amino acid kinase family JKJ11_14085 PF03447 Homoserine dehydrogenase, NAD binding domain JKJ11_14095 PF03737 Aldolase/RraA JKJ11_14105 PF00486 Transcriptional regulatory protein, C terminal JKJ11_14105 PF00072 Response regulator receiver domain JKJ11_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_14115 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_14115 PF18415 Histidine kinase receptor ArcB trans-membrane domain JKJ11_14115 PF01627 Hpt domain JKJ11_14115 PF00989 PAS fold JKJ11_14115 PF00072 Response regulator receiver domain JKJ11_14120 PF04055 Radical SAM superfamily JKJ11_14120 PF16199 Radical_SAM C-terminal domain JKJ11_14125 PF01645 Conserved region in glutamate synthase JKJ11_14125 PF00310 Glutamine amidotransferases class-II JKJ11_14125 PF04898 Glutamate synthase central domain JKJ11_14125 PF01493 GXGXG motif JKJ11_14130 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_14130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JKJ11_14135 PF00310 Glutamine amidotransferases class-II JKJ11_14135 PF04898 Glutamate synthase central domain JKJ11_14135 PF01645 Conserved region in glutamate synthase JKJ11_14135 PF01493 GXGXG motif JKJ11_14140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JKJ11_14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_14150 PF01048 Phosphorylase superfamily JKJ11_14160 PF01497 Periplasmic binding protein JKJ11_14165 PF03458 UPF0126 domain JKJ11_14170 PF00005 ABC transporter JKJ11_14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_14180 PF03466 LysR substrate binding domain JKJ11_14185 PF01925 Sulfite exporter TauE/SafE JKJ11_14195 PF02142 MGS-like domain JKJ11_14195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JKJ11_14195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JKJ11_14200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JKJ11_14200 PF00117 Glutamine amidotransferase class-I JKJ11_14205 PF05173 Dihydrodipicolinate reductase, C-terminus JKJ11_14205 PF01113 Dihydrodipicolinate reductase, N-terminus JKJ11_14210 PF00293 NUDIX domain JKJ11_14215 PF02810 SEC-C motif JKJ11_14215 PF07516 SecA Wing and Scaffold domain JKJ11_14215 PF01043 SecA preprotein cross-linking domain JKJ11_14215 PF07517 SecA DEAD-like domain JKJ11_14220 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JKJ11_14225 PF12327 FtsZ family, C-terminal domain JKJ11_14225 PF00091 Tubulin/FtsZ family, GTPase domain JKJ11_14230 PF02491 SHS2 domain inserted in FTSA JKJ11_14235 PF03799 Cell division protein FtsQ JKJ11_14235 PF08478 POTRA domain, FtsQ-type JKJ11_14240 PF01225 Mur ligase family, catalytic domain JKJ11_14240 PF02875 Mur ligase family, glutamate ligase domain JKJ11_14240 PF08245 Mur ligase middle domain JKJ11_14245 PF04101 Glycosyltransferase family 28 C-terminal domain JKJ11_14245 PF03033 Glycosyltransferase family 28 N-terminal domain JKJ11_14250 PF01098 Cell cycle protein JKJ11_14255 PF02875 Mur ligase family, glutamate ligase domain JKJ11_14255 PF08245 Mur ligase middle domain JKJ11_14260 PF00953 Glycosyl transferase family 4 JKJ11_14260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JKJ11_14265 PF08245 Mur ligase middle domain JKJ11_14265 PF02875 Mur ligase family, glutamate ligase domain JKJ11_14265 PF01225 Mur ligase family, catalytic domain JKJ11_14270 PF01225 Mur ligase family, catalytic domain JKJ11_14270 PF02875 Mur ligase family, glutamate ligase domain JKJ11_14270 PF08245 Mur ligase middle domain JKJ11_14275 PF03717 Penicillin-binding Protein dimerisation domain JKJ11_14275 PF00905 Penicillin binding protein transpeptidase domain JKJ11_14280 PF04999 Cell division protein FtsL JKJ11_14285 PF01795 MraW methylase family JKJ11_14295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JKJ11_14300 PF04348 LppC putative lipoprotein JKJ11_14305 PF02021 Uncharacterised protein family UPF0102 JKJ11_14310 PF13580 SIS domain JKJ11_14315 PF04972 BON domain JKJ11_14320 PF10369 Small subunit of acetolactate synthase JKJ11_14325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_14325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_14325 PF00205 Thiamine pyrophosphate enzyme, central domain JKJ11_14330 PF00873 AcrB/AcrD/AcrF family JKJ11_14340 PF01521 Iron-sulphur cluster biosynthesis JKJ11_14345 PF00202 Aminotransferase class-III JKJ11_14350 PF01594 AI-2E family transporter JKJ11_14355 PF05175 Methyltransferase small domain JKJ11_14355 PF08468 Methyltransferase small domain N-terminal JKJ11_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_14360 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_14360 PF09308 LuxQ, periplasmic JKJ11_14360 PF00072 Response regulator receiver domain JKJ11_14365 PF00330 Aconitase family (aconitate hydratase) JKJ11_14365 PF06434 Aconitate hydratase 2 N-terminus JKJ11_14365 PF11791 Aconitate B N-terminal domain JKJ11_14370 PF01734 Patatin-like phospholipase JKJ11_14375 PF00912 Transglycosylase JKJ11_14375 PF00905 Penicillin binding protein transpeptidase domain JKJ11_14375 PF14814 Bifunctional transglycosylase second domain JKJ11_14380 PF08482 ATP-dependent helicase C-terminal JKJ11_14380 PF00271 Helicase conserved C-terminal domain JKJ11_14380 PF00270 DEAD/DEAH box helicase JKJ11_14380 PF04408 Helicase associated domain (HA2) JKJ11_14385 PF03749 Sugar fermentation stimulation protein RE domain JKJ11_14385 PF17746 SfsA N-terminal OB domain JKJ11_14390 PF01258 Prokaryotic dksA/traR C4-type zinc finger JKJ11_14395 PF00749 tRNA synthetases class I (E and Q), catalytic domain JKJ11_14400 PF01743 Poly A polymerase head domain JKJ11_14400 PF12626 Polymerase A arginine-rich C-terminus JKJ11_14400 PF12627 Probable RNA and SrmB- binding site of polymerase A JKJ11_14405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JKJ11_14410 PF02548 Ketopantoate hydroxymethyltransferase JKJ11_14415 PF02569 Pantoate-beta-alanine ligase JKJ11_14420 PF12729 Four helix bundle sensory module for signal transduction JKJ11_14420 PF00672 HAMP domain JKJ11_14420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_14425 PF00520 Ion transport protein JKJ11_14425 PF00027 Cyclic nucleotide-binding domain JKJ11_14430 PF01928 CYTH domain JKJ11_14435 PF01865 Protein of unknown function DUF47 JKJ11_14440 PF01384 Phosphate transporter family JKJ11_14445 PF08239 Bacterial SH3 domain JKJ11_14450 PF04545 Sigma-70, region 4 JKJ11_14450 PF04539 Sigma-70 region 3 JKJ11_14450 PF04542 Sigma-70 region 2 JKJ11_14450 PF00140 Sigma-70 factor, region 1.2 JKJ11_14455 PF01476 LysM domain JKJ11_14455 PF01551 Peptidase family M23 JKJ11_14465 PF01975 Survival protein SurE JKJ11_14470 PF01142 tRNA pseudouridine synthase D (TruD) JKJ11_14475 PF02542 YgbB family JKJ11_14480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JKJ11_14485 PF04977 Septum formation initiator JKJ11_14495 PF07715 TonB-dependent Receptor Plug Domain JKJ11_14495 PF00593 TonB dependent receptor JKJ11_14505 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_14510 PF01758 Sodium Bile acid symporter family JKJ11_14530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JKJ11_14530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JKJ11_14535 PF01022 Bacterial regulatory protein, arsR family JKJ11_14540 PF01380 SIS domain JKJ11_14540 PF01418 Helix-turn-helix domain, rpiR family JKJ11_14545 PF08244 Glycosyl hydrolases family 32 C terminal JKJ11_14545 PF00251 Glycosyl hydrolases family 32 N-terminal domain JKJ11_14550 PF02378 Phosphotransferase system, EIIC JKJ11_14550 PF00367 phosphotransferase system, EIIB JKJ11_14555 PF02502 Ribose/Galactose Isomerase JKJ11_14560 PF00834 Ribulose-phosphate 3 epimerase family JKJ11_14565 PF01022 Bacterial regulatory protein, arsR family JKJ11_14570 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_14575 PF00224 Pyruvate kinase, barrel domain JKJ11_14575 PF02887 Pyruvate kinase, alpha/beta domain JKJ11_14595 PF00482 Type II secretion system (T2SS), protein F JKJ11_14600 PF00437 Type II/IV secretion system protein JKJ11_14635 PF05946 Toxin-coregulated pilus subunit TcpA JKJ11_14635 PF07963 Prokaryotic N-terminal methylation motif JKJ11_14655 PF04386 Stringent starvation protein B JKJ11_14660 PF00043 Glutathione S-transferase, C-terminal domain JKJ11_14660 PF02798 Glutathione S-transferase, N-terminal domain JKJ11_14665 PF02167 Cytochrome C1 family JKJ11_14670 PF00032 Cytochrome b(C-terminal)/b6/petD JKJ11_14670 PF00033 Cytochrome b/b6/petB JKJ11_14675 PF00355 Rieske [2Fe-2S] domain JKJ11_14675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JKJ11_14680 PF00380 Ribosomal protein S9/S16 JKJ11_14685 PF00572 Ribosomal protein L13 JKJ11_14690 PF03969 AFG1-like ATPase JKJ11_14695 PF06295 Protein of unknown function (DUF1043) JKJ11_14700 PF00595 PDZ domain JKJ11_14705 PF13180 PDZ domain JKJ11_14710 PF00521 DNA gyrase/topoisomerase IV, subunit A JKJ11_14710 PF03989 DNA gyrase C-terminal domain, beta-propeller JKJ11_14715 PF00204 DNA gyrase B JKJ11_14715 PF01751 Toprim domain JKJ11_14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_14715 PF00986 DNA gyrase B subunit, carboxyl terminus JKJ11_14720 PF05728 Uncharacterised protein family (UPF0227) JKJ11_14725 PF00149 Calcineurin-like phosphoesterase JKJ11_14730 PF06853 Protein of unknown function (DUF1249) JKJ11_14735 PF00293 NUDIX domain JKJ11_14740 PF02321 Outer membrane efflux protein JKJ11_14745 PF00294 pfkB family carbohydrate kinase JKJ11_14745 PF01467 Cytidylyltransferase-like JKJ11_14750 PF03710 Glutamate-ammonia ligase adenylyltransferase JKJ11_14750 PF08335 GlnD PII-uridylyltransferase JKJ11_14755 PF01061 ABC-2 type transporter JKJ11_14760 PF00005 ABC transporter JKJ11_14765 PF00916 Sulfate permease family JKJ11_14765 PF01740 STAS domain JKJ11_14770 PF00484 Carbonic anhydrase JKJ11_14775 PF00156 Phosphoribosyl transferase domain JKJ11_14780 PF00440 Bacterial regulatory proteins, tetR family JKJ11_14785 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_14785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_14790 PF02817 e3 binding domain JKJ11_14790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JKJ11_14790 PF00364 Biotin-requiring enzyme JKJ11_14795 PF00456 Transketolase, thiamine diphosphate binding domain JKJ11_14795 PF17831 Pyruvate dehydrogenase E1 component middle domain JKJ11_14800 PF07729 FCD domain JKJ11_14800 PF00392 Bacterial regulatory proteins, gntR family JKJ11_14805 PF01510 N-acetylmuramoyl-L-alanine amidase JKJ11_14810 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JKJ11_14810 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JKJ11_14815 PF07963 Prokaryotic N-terminal methylation motif JKJ11_14815 PF00114 Pilin (bacterial filament) JKJ11_14820 PF00437 Type II/IV secretion system protein JKJ11_14820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JKJ11_14825 PF00482 Type II secretion system (T2SS), protein F JKJ11_14830 PF06750 Bacterial Peptidase A24 N-terminal domain JKJ11_14830 PF01478 Type IV leader peptidase family JKJ11_14835 PF01121 Dephospho-CoA kinase JKJ11_14840 PF07072 Cell division protein JKJ11_14845 PF03884 DNA gyrase inhibitor YacG JKJ11_14850 PF01245 Ribosomal protein L19 JKJ11_14855 PF01746 tRNA (Guanine-1)-methyltransferase JKJ11_14860 PF01782 RimM N-terminal domain JKJ11_14860 PF05239 PRC-barrel domain JKJ11_14865 PF00886 Ribosomal protein S16 JKJ11_14870 PF02881 SRP54-type protein, helical bundle domain JKJ11_14870 PF02978 Signal peptide binding domain JKJ11_14870 PF00448 SRP54-type protein, GTPase domain JKJ11_14875 PF01578 Cytochrome C assembly protein JKJ11_14880 PF00571 CBS domain JKJ11_14880 PF03471 Transporter associated domain JKJ11_14880 PF01595 Cyclin M transmembrane N-terminal domain JKJ11_14885 PF02574 Homocysteine S-methyltransferase JKJ11_14885 PF00809 Pterin binding enzyme JKJ11_14885 PF02965 Vitamin B12 dependent methionine synthase, activation domain JKJ11_14885 PF02607 B12 binding domain JKJ11_14885 PF02310 B12 binding domain JKJ11_14890 PF00999 Sodium/hydrogen exchanger family JKJ11_14915 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JKJ11_14915 PF01464 Transglycosylase SLT domain JKJ11_14920 PF04362 Bacterial Fe(2+) trafficking JKJ11_14925 PF00633 Helix-hairpin-helix motif JKJ11_14925 PF00730 HhH-GPD superfamily base excision DNA repair protein JKJ11_14925 PF14815 NUDIX domain JKJ11_14930 PF02390 Putative methyltransferase JKJ11_14935 PF04960 Glutaminase JKJ11_14945 PF06969 HemN C-terminal domain JKJ11_14945 PF04055 Radical SAM superfamily JKJ11_14950 PF01725 Ham1 family JKJ11_14960 PF02594 Uncharacterised ACR, YggU family COG1872 JKJ11_14965 PF02325 YGGT family JKJ11_14970 PF14748 Pyrroline-5-carboxylate reductase dimerisation JKJ11_14970 PF03807 NADP oxidoreductase coenzyme F420-dependent JKJ11_14975 PF01168 Alanine racemase, N-terminal domain JKJ11_14980 PF00437 Type II/IV secretion system protein JKJ11_14985 PF00437 Type II/IV secretion system protein JKJ11_15095 PF01507 Phosphoadenosine phosphosulfate reductase family JKJ11_15100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JKJ11_15100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JKJ11_15105 PF00667 FAD binding domain JKJ11_15105 PF00258 Flavodoxin JKJ11_15105 PF00175 Oxidoreductase NAD-binding domain JKJ11_15120 PF01207 Dihydrouridine synthase (Dus) JKJ11_15150 PF05707 Zonular occludens toxin (Zot) JKJ11_15180 PF05840 Bacteriophage replication gene A protein (GPA) JKJ11_15215 PF01475 Ferric uptake regulator family JKJ11_15225 PF03739 Lipopolysaccharide export system permease LptF/LptG JKJ11_15230 PF03739 Lipopolysaccharide export system permease LptF/LptG JKJ11_15235 PF00883 Cytosol aminopeptidase family, catalytic domain JKJ11_15235 PF02789 Cytosol aminopeptidase family, N-terminal domain JKJ11_15240 PF04364 DNA polymerase III chi subunit, HolC JKJ11_15245 PF08264 Anticodon-binding domain of tRNA JKJ11_15245 PF00133 tRNA synthetases class I (I, L, M and V) JKJ11_15245 PF10458 Valyl tRNA synthetase tRNA binding arm JKJ11_15250 PF00266 Aminotransferase class-V JKJ11_15255 PF01842 ACT domain JKJ11_15255 PF00696 Amino acid kinase family JKJ11_15280 PF01966 HD domain JKJ11_15305 PF00342 Phosphoglucose isomerase JKJ11_15310 PF01894 Uncharacterised protein family UPF0047 JKJ11_15315 PF00842 Alanine racemase, C-terminal domain JKJ11_15315 PF01168 Alanine racemase, N-terminal domain JKJ11_15320 PF03796 DnaB-like helicase C terminal domain JKJ11_15320 PF00772 DnaB-like helicase N terminal domain JKJ11_15330 PF03948 Ribosomal protein L9, C-terminal domain JKJ11_15330 PF01281 Ribosomal protein L9, N-terminal domain JKJ11_15335 PF01084 Ribosomal protein S18 JKJ11_15340 PF01250 Ribosomal protein S6 JKJ11_15345 PF01112 Asparaginase JKJ11_15350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_15360 PF02254 TrkA-N domain JKJ11_15360 PF00999 Sodium/hydrogen exchanger family JKJ11_15365 PF02525 Flavodoxin-like fold JKJ11_15370 PF12848 ABC transporter JKJ11_15370 PF00005 ABC transporter JKJ11_15380 PF01810 LysE type translocator JKJ11_15385 PF00392 Bacterial regulatory proteins, gntR family JKJ11_15385 PF00155 Aminotransferase class I and II JKJ11_15390 PF00561 alpha/beta hydrolase fold JKJ11_15395 PF06794 Uncharacterised protein family (UPF0270) JKJ11_15400 PF00485 Phosphoribulokinase / Uridine kinase family JKJ11_15405 PF00027 Cyclic nucleotide-binding domain JKJ11_15405 PF13545 Crp-like helix-turn-helix domain JKJ11_15415 PF00171 Aldehyde dehydrogenase family JKJ11_15420 PF04958 Arginine N-succinyltransferase beta subunit JKJ11_15425 PF00202 Aminotransferase class-III JKJ11_15430 PF00117 Glutamine amidotransferase class-I JKJ11_15440 PF00579 tRNA synthetases class I (W and Y) JKJ11_15445 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_15450 PF00834 Ribulose-phosphate 3 epimerase family JKJ11_15455 PF02086 D12 class N6 adenine-specific DNA methyltransferase JKJ11_15465 PF01761 3-dehydroquinate synthase JKJ11_15470 PF01202 Shikimate kinase JKJ11_15475 PF07660 Secretin and TonB N terminus short domain JKJ11_15475 PF03958 Bacterial type II/III secretion system short domain JKJ11_15475 PF00263 Bacterial type II and III secretion system protein JKJ11_15475 PF11741 AMIN domain JKJ11_15495 PF11104 Type IV pilus assembly protein PilM; JKJ11_15500 PF17092 Penicillin-binding protein OB-like domain JKJ11_15500 PF00905 Penicillin binding protein transpeptidase domain JKJ11_15500 PF00912 Transglycosylase JKJ11_15505 PF03466 LysR substrate binding domain JKJ11_15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_15510 PF08534 Redoxin JKJ11_15510 PF00462 Glutaredoxin JKJ11_15515 PF01042 Endoribonuclease L-PSP JKJ11_15520 PF00583 Acetyltransferase (GNAT) family JKJ11_15520 PF00206 Lyase JKJ11_15520 PF14698 Argininosuccinate lyase C-terminal JKJ11_15525 PF00764 Arginosuccinate synthase JKJ11_15530 PF00696 Amino acid kinase family JKJ11_15535 PF02774 Semialdehyde dehydrogenase, dimerisation domain JKJ11_15535 PF01118 Semialdehyde dehydrogenase, NAD binding domain JKJ11_15540 PF01546 Peptidase family M20/M25/M40 JKJ11_15540 PF07687 Peptidase dimerisation domain JKJ11_15545 PF00311 Phosphoenolpyruvate carboxylase JKJ11_15550 PF03551 Transcriptional regulator PadR-like family JKJ11_15550 PF10400 Virulence activator alpha C-term JKJ11_15555 PF02219 Methylenetetrahydrofolate reductase JKJ11_15560 PF00696 Amino acid kinase family JKJ11_15560 PF00742 Homoserine dehydrogenase JKJ11_15560 PF03447 Homoserine dehydrogenase, NAD binding domain JKJ11_15565 PF01053 Cys/Met metabolism PLP-dependent enzyme JKJ11_15570 PF01340 Met Apo-repressor, MetJ JKJ11_15575 PF00390 Malic enzyme, N-terminal domain JKJ11_15575 PF03949 Malic enzyme, NAD binding domain JKJ11_15580 PF01197 Ribosomal protein L31 JKJ11_15585 PF18074 Primosomal protein N C-terminal domain JKJ11_15585 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JKJ11_15585 PF00271 Helicase conserved C-terminal domain JKJ11_15585 PF00270 DEAD/DEAH box helicase JKJ11_15585 PF17764 3′ DNA-binding domain (3′BD) JKJ11_15590 PF00356 Bacterial regulatory proteins, lacI family JKJ11_15600 PF00227 Proteasome subunit JKJ11_15605 PF07724 AAA domain (Cdc48 subfamily) JKJ11_15605 PF00004 ATPase family associated with various cellular activities (AAA) JKJ11_15610 PF01040 UbiA prenyltransferase family JKJ11_15615 PF03737 Aldolase/RraA JKJ11_15620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JKJ11_15620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JKJ11_15620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JKJ11_15625 PF02397 Bacterial sugar transferase JKJ11_15630 PF01370 NAD dependent epimerase/dehydratase family JKJ11_15635 PF02719 Polysaccharide biosynthesis protein JKJ11_15660 PF00535 Glycosyl transferase family 2 JKJ11_15665 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JKJ11_15670 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JKJ11_15680 PF02719 Polysaccharide biosynthesis protein JKJ11_15685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JKJ11_15690 PF00005 ABC transporter JKJ11_15700 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JKJ11_15700 PF10996 Beta-Casp domain JKJ11_15700 PF00753 Metallo-beta-lactamase superfamily JKJ11_15705 PF01370 NAD dependent epimerase/dehydratase family JKJ11_15715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JKJ11_15720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JKJ11_15735 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) JKJ11_15740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JKJ11_15740 PF00535 Glycosyl transferase family 2 JKJ11_15745 PF01467 Cytidylyltransferase-like JKJ11_15750 PF00535 Glycosyl transferase family 2 JKJ11_15765 PF00534 Glycosyl transferases group 1 JKJ11_15765 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JKJ11_15775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JKJ11_15780 PF00535 Glycosyl transferase family 2 JKJ11_15785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JKJ11_15790 PF01467 Cytidylyltransferase-like JKJ11_15795 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JKJ11_15800 PF00156 Phosphoribosyl transferase domain JKJ11_15805 PF01138 3' exoribonuclease family, domain 1 JKJ11_15805 PF03725 3' exoribonuclease family, domain 2 JKJ11_15810 PF08340 Domain of unknown function (DUF1732) JKJ11_15810 PF03755 YicC-like family, N-terminal region JKJ11_15815 PF00860 Permease family JKJ11_15820 PF00625 Guanylate kinase JKJ11_15825 PF01192 RNA polymerase Rpb6 JKJ11_15830 PF13291 ACT domain JKJ11_15830 PF04607 Region found in RelA / SpoT proteins JKJ11_15830 PF02824 TGS domain JKJ11_15835 PF12105 SpoU, rRNA methylase, C-terminal JKJ11_15835 PF00588 SpoU rRNA Methylase family JKJ11_15840 PF00270 DEAD/DEAH box helicase JKJ11_15840 PF00271 Helicase conserved C-terminal domain JKJ11_15840 PF17191 RecG wedge domain JKJ11_15845 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_15845 PF00672 HAMP domain JKJ11_15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_15850 PF00072 Response regulator receiver domain JKJ11_15850 PF00486 Transcriptional regulatory protein, C terminal JKJ11_15860 PF01272 Transcription elongation factor, GreA/GreB, C-term JKJ11_15860 PF03449 Transcription elongation factor, N-terminal JKJ11_15880 PF00577 Outer membrane usher protein JKJ11_15880 PF13954 PapC N-terminal domain JKJ11_15880 PF13953 PapC C-terminal domain JKJ11_15895 PF04222 Protein of unknown function (DUF416) JKJ11_15900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_15910 PF01208 Uroporphyrinogen decarboxylase (URO-D) JKJ11_15915 PF00293 NUDIX domain JKJ11_15915 PF09297 NADH pyrophosphatase zinc ribbon domain JKJ11_15920 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JKJ11_15925 PF05000 RNA polymerase Rpb1, domain 4 JKJ11_15925 PF04998 RNA polymerase Rpb1, domain 5 JKJ11_15925 PF00623 RNA polymerase Rpb1, domain 2 JKJ11_15925 PF04983 RNA polymerase Rpb1, domain 3 JKJ11_15925 PF04997 RNA polymerase Rpb1, domain 1 JKJ11_15930 PF04563 RNA polymerase beta subunit JKJ11_15930 PF04561 RNA polymerase Rpb2, domain 2 JKJ11_15930 PF04565 RNA polymerase Rpb2, domain 3 JKJ11_15930 PF10385 RNA polymerase beta subunit external 1 domain JKJ11_15930 PF00562 RNA polymerase Rpb2, domain 6 JKJ11_15930 PF04560 RNA polymerase Rpb2, domain 7 JKJ11_15935 PF00542 Ribosomal protein L7/L12 C-terminal domain JKJ11_15935 PF16320 Ribosomal protein L7/L12 dimerisation domain JKJ11_15940 PF00466 Ribosomal protein L10 JKJ11_15945 PF00687 Ribosomal protein L1p/L10e family JKJ11_15950 PF00298 Ribosomal protein L11, RNA binding domain JKJ11_15950 PF03946 Ribosomal protein L11, N-terminal domain JKJ11_15955 PF00467 KOW motif JKJ11_15955 PF02357 Transcription termination factor nusG JKJ11_15960 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JKJ11_15965 PF03143 Elongation factor Tu C-terminal domain JKJ11_15965 PF03144 Elongation factor Tu domain 2 JKJ11_15965 PF00009 Elongation factor Tu GTP binding domain JKJ11_15990 PF00485 Phosphoribulokinase / Uridine kinase family JKJ11_15995 PF08279 HTH domain JKJ11_15995 PF02237 Biotin protein ligase C terminal domain JKJ11_15995 PF03099 Biotin/lipoate A/B protein ligase family JKJ11_16000 PF01565 FAD binding domain JKJ11_16000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JKJ11_16010 PF13091 PLD-like domain JKJ11_16015 PF03144 Elongation factor Tu domain 2 JKJ11_16015 PF00679 Elongation factor G C-terminus JKJ11_16015 PF00009 Elongation factor Tu GTP binding domain JKJ11_16020 PF00120 Glutamine synthetase, catalytic domain JKJ11_16020 PF03951 Glutamine synthetase, beta-Grasp domain JKJ11_16030 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_16030 PF00989 PAS fold JKJ11_16035 PF00072 Response regulator receiver domain JKJ11_16035 PF00158 Sigma-54 interaction domain JKJ11_16035 PF02954 Bacterial regulatory protein, Fis family JKJ11_16040 PF00563 EAL domain JKJ11_16040 PF03707 Bacterial signalling protein N terminal repeat JKJ11_16040 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_16045 PF06969 HemN C-terminal domain JKJ11_16045 PF04055 Radical SAM superfamily JKJ11_16055 PF04220 Der GTPase activator (YihI) JKJ11_16065 PF00717 Peptidase S24-like JKJ11_16065 PF01726 LexA DNA binding domain JKJ11_16070 PF01553 Acyltransferase JKJ11_16075 PF01040 UbiA prenyltransferase family JKJ11_16080 PF04345 Chorismate lyase JKJ11_16085 PF03748 Flagellar basal body-associated protein FliL JKJ11_16090 PF01694 Rhomboid family JKJ11_16090 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JKJ11_16095 PF00581 Rhodanese-like domain JKJ11_16100 PF00140 Sigma-70 factor, region 1.2 JKJ11_16100 PF04542 Sigma-70 region 2 JKJ11_16100 PF04545 Sigma-70, region 4 JKJ11_16105 PF18075 FtsX extracellular domain JKJ11_16110 PF00005 ABC transporter JKJ11_16115 PF00448 SRP54-type protein, GTPase domain JKJ11_16115 PF02881 SRP54-type protein, helical bundle domain JKJ11_16115 PF00448 SRP54-type protein, GTPase domain JKJ11_16115 PF02881 SRP54-type protein, helical bundle domain JKJ11_16150 PF13538 UvrD-like helicase C-terminal domain JKJ11_16150 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JKJ11_16150 PF14490 Helix-hairpin-helix containing domain JKJ11_16155 PF00166 Chaperonin 10 Kd subunit JKJ11_16160 PF00118 TCP-1/cpn60 chaperonin family JKJ11_16165 PF00011 Hsp20/alpha crystallin family JKJ11_16170 PF00011 Hsp20/alpha crystallin family JKJ11_16185 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_16185 PF00072 Response regulator receiver domain JKJ11_16185 PF09308 LuxQ, periplasmic JKJ11_16190 PF01914 MarC family integral membrane protein JKJ11_16220 PF00563 EAL domain JKJ11_16220 PF08668 HDOD domain JKJ11_16225 PF01810 LysE type translocator JKJ11_16250 PF03942 DTW domain JKJ11_16255 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_16260 PF02899 Phage integrase, N-terminal SAM-like domain JKJ11_16260 PF00589 Phage integrase family JKJ11_16270 PF01678 Diaminopimelate epimerase JKJ11_16275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JKJ11_16275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JKJ11_16285 PF01491 Frataxin-like domain JKJ11_16290 PF12633 Adenylate cyclase NT domain JKJ11_16290 PF01295 Adenylate cyclase, class-I JKJ11_16295 PF03900 Porphobilinogen deaminase, C-terminal domain JKJ11_16295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JKJ11_16300 PF02602 Uroporphyrinogen-III synthase HemD JKJ11_16305 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JKJ11_16310 PF07219 HemY protein N-terminus JKJ11_16350 PF00175 Oxidoreductase NAD-binding domain JKJ11_16355 PF00970 Oxidoreductase FAD-binding domain JKJ11_16355 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_16355 PF00175 Oxidoreductase NAD-binding domain JKJ11_16360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JKJ11_16370 PF07497 Rho termination factor, RNA-binding domain JKJ11_16370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_16370 PF07498 Rho termination factor, N-terminal domain JKJ11_16375 PF00085 Thioredoxin JKJ11_16380 PF00270 DEAD/DEAH box helicase JKJ11_16380 PF00271 Helicase conserved C-terminal domain JKJ11_16385 PF02541 Ppx/GppA phosphatase family JKJ11_16390 PF02592 Putative vitamin uptake transporter JKJ11_16400 PF16124 RecQ zinc-binding JKJ11_16400 PF00270 DEAD/DEAH box helicase JKJ11_16400 PF00271 Helicase conserved C-terminal domain JKJ11_16400 PF00570 HRDC domain JKJ11_16400 PF09382 RQC domain JKJ11_16405 PF00892 EamA-like transporter family JKJ11_16410 PF12852 Cupin JKJ11_16410 PF12833 Helix-turn-helix domain JKJ11_16415 PF01810 LysE type translocator JKJ11_16420 PF00580 UvrD/REP helicase N-terminal domain JKJ11_16420 PF13361 UvrD-like helicase C-terminal domain JKJ11_16430 PF05114 Protein of unknown function (DUF692) JKJ11_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_16455 PF03466 LysR substrate binding domain JKJ11_16460 PF00557 Metallopeptidase family M24 JKJ11_16460 PF01321 Creatinase/Prolidase N-terminal domain JKJ11_16465 PF06968 Biotin and Thiamin Synthesis associated domain JKJ11_16465 PF04055 Radical SAM superfamily JKJ11_16470 PF05690 Thiazole biosynthesis protein ThiG JKJ11_16480 PF00899 ThiF family JKJ11_16485 PF02581 Thiamine monophosphate synthase JKJ11_16490 PF01964 Radical SAM ThiC family JKJ11_16490 PF13667 ThiC-associated domain JKJ11_16495 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JKJ11_16500 PF07732 Multicopper oxidase JKJ11_16500 PF10518 TAT (twin-arginine translocation) pathway signal sequence JKJ11_16500 PF07731 Multicopper oxidase JKJ11_16500 PF00394 Multicopper oxidase JKJ11_16545 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_16550 PF07369 Protein of unknown function (DUF1488) JKJ11_16555 PF08501 Shikimate dehydrogenase substrate binding domain JKJ11_16555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JKJ11_16555 PF01488 Shikimate / quinate 5-dehydrogenase JKJ11_16560 PF01218 Coproporphyrinogen III oxidase JKJ11_16565 PF01300 Telomere recombination JKJ11_16570 PF00731 AIR carboxylase JKJ11_16575 PF02222 ATP-grasp domain JKJ11_16575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JKJ11_16580 PF01396 Topoisomerase DNA binding C4 zinc finger JKJ11_16585 PF04361 Protein of unknown function (DUF494) JKJ11_16590 PF17782 DprA winged helix domain JKJ11_16590 PF02481 DNA recombination-mediator protein A JKJ11_16600 PF01327 Polypeptide deformylase JKJ11_16605 PF00551 Formyl transferase JKJ11_16605 PF02911 Formyl transferase, C-terminal domain JKJ11_16610 PF01029 NusB family JKJ11_16610 PF01189 16S rRNA methyltransferase RsmB/F JKJ11_16615 PF02080 TrkA-C domain JKJ11_16615 PF02254 TrkA-N domain JKJ11_16620 PF02386 Cation transport protein JKJ11_16625 PF03006 Haemolysin-III related JKJ11_16630 PF07070 SpoOM protein JKJ11_16640 PF06288 Protein of unknown function (DUF1040) JKJ11_16645 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JKJ11_16645 PF13746 4Fe-4S dicluster domain JKJ11_16645 PF12801 4Fe-4S binding domain JKJ11_16650 PF01636 Phosphotransferase enzyme family JKJ11_16655 PF01323 DSBA-like thioredoxin domain JKJ11_16660 PF01553 Acyltransferase JKJ11_16675 PF13335 Magnesium chelatase, subunit ChlI C-terminal JKJ11_16675 PF01078 Magnesium chelatase, subunit ChlI JKJ11_16680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_16680 PF00205 Thiamine pyrophosphate enzyme, central domain JKJ11_16680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_16690 PF01063 Amino-transferase class IV JKJ11_16695 PF00920 Dehydratase family JKJ11_16700 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_16700 PF00585 C-terminal regulatory domain of Threonine dehydratase JKJ11_16705 PF03466 LysR substrate binding domain JKJ11_16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_16710 PF07690 Major Facilitator Superfamily JKJ11_16715 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_16720 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_16725 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_16725 PF12804 MobA-like NTP transferase domain JKJ11_16730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JKJ11_16730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JKJ11_16735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_16735 PF02874 ATP synthase alpha/beta family, beta-barrel domain JKJ11_16740 PF00231 ATP synthase JKJ11_16745 PF02874 ATP synthase alpha/beta family, beta-barrel domain JKJ11_16745 PF00306 ATP synthase alpha/beta chain, C terminal domain JKJ11_16745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_16750 PF00213 ATP synthase delta (OSCP) subunit JKJ11_16755 PF00430 ATP synthase B/B' CF(0) JKJ11_16760 PF00137 ATP synthase subunit C JKJ11_16765 PF00119 ATP synthase A chain JKJ11_16770 PF03899 ATP synthase I chain JKJ11_16775 PF02195 ParB-like nuclease domain JKJ11_16775 PF17762 HTH domain found in ParB protein JKJ11_16780 PF13614 AAA domain JKJ11_16785 PF02527 rRNA small subunit methyltransferase G JKJ11_16790 PF01134 Glucose inhibited division protein A JKJ11_16790 PF13932 GidA associated domain JKJ11_16795 PF00258 Flavodoxin JKJ11_16800 PF01926 50S ribosome-binding GTPase JKJ11_16800 PF10396 GTP-binding protein TrmE N-terminus JKJ11_16800 PF12631 MnmE helical domain JKJ11_16805 PF14849 YidC periplasmic domain JKJ11_16805 PF02096 60Kd inner membrane protein JKJ11_16810 PF01809 Putative membrane protein insertion efficiency factor JKJ11_16815 PF00825 Ribonuclease P JKJ11_16820 PF00468 Ribosomal protein L34 JKJ11_16825 PF00005 ABC transporter JKJ11_16830 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_16835 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_16840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JKJ11_16840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JKJ11_16845 PF00115 Cytochrome C and Quinol oxidase polypeptide I JKJ11_16850 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JKJ11_16855 PF00510 Cytochrome c oxidase subunit III JKJ11_16875 PF02628 Cytochrome oxidase assembly protein JKJ11_16880 PF01040 UbiA prenyltransferase family JKJ11_16885 PF13609 Gram-negative porin JKJ11_16890 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_16895 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_16900 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_16905 PF00005 ABC transporter JKJ11_16915 PF03606 C4-dicarboxylate anaerobic carrier JKJ11_16920 PF01546 Peptidase family M20/M25/M40 JKJ11_16920 PF07687 Peptidase dimerisation domain JKJ11_16925 PF07729 FCD domain JKJ11_16925 PF00392 Bacterial regulatory proteins, gntR family JKJ11_16930 PF03063 Prismane/CO dehydrogenase family JKJ11_16935 PF00970 Oxidoreductase FAD-binding domain JKJ11_16935 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_16935 PF00175 Oxidoreductase NAD-binding domain JKJ11_16945 PF02525 Flavodoxin-like fold JKJ11_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_16955 PF03466 LysR substrate binding domain JKJ11_16960 PF07690 Major Facilitator Superfamily JKJ11_16965 PF00912 Transglycosylase JKJ11_16975 PF00072 Response regulator receiver domain JKJ11_16975 PF01584 CheW-like domain JKJ11_16985 PF10928 Protein of unknown function (DUF2810) JKJ11_16990 PF00128 Alpha amylase, catalytic domain JKJ11_16995 PF00128 Alpha amylase, catalytic domain JKJ11_17000 PF11893 Domain of unknown function (DUF3413) JKJ11_17000 PF00884 Sulfatase JKJ11_17010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_17025 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17040 PF02685 Glucokinase JKJ11_17040 PF01418 Helix-turn-helix domain, rpiR family JKJ11_17040 PF01380 SIS domain JKJ11_17050 PF07969 Amidohydrolase family JKJ11_17060 PF00474 Sodium:solute symporter family JKJ11_17065 PF00294 pfkB family carbohydrate kinase JKJ11_17070 PF01081 KDPG and KHG aldolase JKJ11_17075 PF00728 Glycosyl hydrolase family 20, catalytic domain JKJ11_17075 PF02838 Glycosyl hydrolase family 20, domain 2 JKJ11_17085 PF05230 MASE2 domain JKJ11_17085 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17090 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_17095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_17095 PF00072 Response regulator receiver domain JKJ11_17095 PF09308 LuxQ, periplasmic JKJ11_17095 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_17100 PF03150 Di-haem cytochrome c peroxidase JKJ11_17100 PF00034 Cytochrome c JKJ11_17105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_17110 PF00873 AcrB/AcrD/AcrF family JKJ11_17120 PF03606 C4-dicarboxylate anaerobic carrier JKJ11_17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17125 PF03466 LysR substrate binding domain JKJ11_17130 PF03472 Autoinducer binding domain JKJ11_17130 PF00196 Bacterial regulatory proteins, luxR family JKJ11_17135 PF00765 Autoinducer synthase JKJ11_17140 PF07694 5TMR of 5TMR-LYT JKJ11_17140 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17145 PF03466 LysR substrate binding domain JKJ11_17150 PF00196 Bacterial regulatory proteins, luxR family JKJ11_17150 PF00072 Response regulator receiver domain JKJ11_17155 PF00462 Glutaredoxin JKJ11_17160 PF00892 EamA-like transporter family JKJ11_17165 PF03606 C4-dicarboxylate anaerobic carrier JKJ11_17170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JKJ11_17175 PF13609 Gram-negative porin JKJ11_17180 PF13609 Gram-negative porin JKJ11_17190 PF13609 Gram-negative porin JKJ11_17200 PF13519 von Willebrand factor type A domain JKJ11_17205 PF13519 von Willebrand factor type A domain JKJ11_17215 PF01882 Protein of unknown function DUF58 JKJ11_17220 PF07726 ATPase family associated with various cellular activities (AAA) JKJ11_17220 PF17863 AAA lid domain JKJ11_17230 PF00196 Bacterial regulatory proteins, luxR family JKJ11_17245 PF00196 Bacterial regulatory proteins, luxR family JKJ11_17255 PF03783 Curli production assembly/transport component CsgG JKJ11_17280 PF00005 ABC transporter JKJ11_17280 PF08402 TOBE domain JKJ11_17285 PF01547 Bacterial extracellular solute-binding protein JKJ11_17290 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_17290 PF14785 Maltose transport system permease protein MalF P2 domain JKJ11_17295 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17315 PF16657 Maltogenic Amylase, C-terminal domain JKJ11_17315 PF00128 Alpha amylase, catalytic domain JKJ11_17330 PF01547 Bacterial extracellular solute-binding protein JKJ11_17335 PF02903 Alpha amylase, N-terminal ig-like domain JKJ11_17335 PF00128 Alpha amylase, catalytic domain JKJ11_17335 PF16657 Maltogenic Amylase, C-terminal domain JKJ11_17355 PF00356 Bacterial regulatory proteins, lacI family JKJ11_17360 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JKJ11_17365 PF02378 Phosphotransferase system, EIIC JKJ11_17370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_17375 PF02378 Phosphotransferase system, EIIC JKJ11_17400 PF00892 EamA-like transporter family JKJ11_17405 PF14480 DNA polymerase III polC-type N-terminus I JKJ11_17405 PF00929 Exonuclease JKJ11_17405 PF11490 DNA polymerase III polC-type N-terminus II JKJ11_17405 PF14579 Helix-hairpin-helix motif JKJ11_17405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JKJ11_17405 PF07733 Bacterial DNA polymerase III alpha NTPase domain JKJ11_17405 PF02811 PHP domain JKJ11_17410 PF00209 Sodium:neurotransmitter symporter family JKJ11_17415 PF02743 Cache domain JKJ11_17415 PF00672 HAMP domain JKJ11_17415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_17420 PF01177 Asp/Glu/Hydantoin racemase JKJ11_17425 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17430 PF03466 LysR substrate binding domain JKJ11_17450 PF00563 EAL domain JKJ11_17450 PF00196 Bacterial regulatory proteins, luxR family JKJ11_17465 PF02779 Transketolase, pyrimidine binding domain JKJ11_17465 PF02780 Transketolase, C-terminal domain JKJ11_17465 PF00456 Transketolase, thiamine diphosphate binding domain JKJ11_17470 PF00923 Transaldolase/Fructose-6-phosphate aldolase JKJ11_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17480 PF03466 LysR substrate binding domain JKJ11_17490 PF00581 Rhodanese-like domain JKJ11_17500 PF00899 ThiF family JKJ11_17505 PF00994 Probable molybdopterin binding domain JKJ11_17505 PF03454 MoeA C-terminal region (domain IV) JKJ11_17505 PF03453 MoeA N-terminal region (domain I and II) JKJ11_17510 PF01227 GTP cyclohydrolase I JKJ11_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_17515 PF00072 Response regulator receiver domain JKJ11_17520 PF00155 Aminotransferase class I and II JKJ11_17530 PF00654 Voltage gated chloride channel JKJ11_17535 PF02492 CobW/HypB/UreG, nucleotide-binding domain JKJ11_17535 PF07683 Cobalamin synthesis protein cobW C-terminal domain JKJ11_17550 PF07726 ATPase family associated with various cellular activities (AAA) JKJ11_17550 PF17863 AAA lid domain JKJ11_17570 PF07584 Aerotolerance regulator N-terminal JKJ11_17570 PF13519 von Willebrand factor type A domain JKJ11_17580 PF03466 LysR substrate binding domain JKJ11_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_17585 PF03466 LysR substrate binding domain JKJ11_17590 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17600 PF03781 Sulfatase-modifying factor enzyme 1 JKJ11_17605 PF13186 Iron-sulfur cluster-binding domain JKJ11_17605 PF04055 Radical SAM superfamily JKJ11_17615 PF03616 Sodium/glutamate symporter JKJ11_17630 PF00043 Glutathione S-transferase, C-terminal domain JKJ11_17630 PF02798 Glutathione S-transferase, N-terminal domain JKJ11_17640 PF14602 Hexapeptide repeat of succinyl-transferase JKJ11_17640 PF12464 Maltose acetyltransferase JKJ11_17645 PF00563 EAL domain JKJ11_17645 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_17645 PF03707 Bacterial signalling protein N terminal repeat JKJ11_17650 PF05025 RbsD / FucU transport protein family JKJ11_17655 PF00005 ABC transporter JKJ11_17660 PF02653 Branched-chain amino acid transport system / permease component JKJ11_17665 PF13407 Periplasmic binding protein domain JKJ11_17670 PF00294 pfkB family carbohydrate kinase JKJ11_17675 PF00356 Bacterial regulatory proteins, lacI family JKJ11_17680 PF00465 Iron-containing alcohol dehydrogenase JKJ11_17690 PF06483 Chitinase C JKJ11_17690 PF00704 Glycosyl hydrolases family 18 JKJ11_17695 PF00483 Nucleotidyl transferase JKJ11_17710 PF00005 ABC transporter JKJ11_17710 PF12704 MacB-like periplasmic core domain JKJ11_17710 PF02687 FtsX-like permease family JKJ11_17715 PF00005 ABC transporter JKJ11_17725 PF00293 NUDIX domain JKJ11_17735 PF02653 Branched-chain amino acid transport system / permease component JKJ11_17740 PF02653 Branched-chain amino acid transport system / permease component JKJ11_17745 PF00005 ABC transporter JKJ11_17755 PF04198 Putative sugar-binding domain JKJ11_17760 PF00248 Aldo/keto reductase family JKJ11_17765 PF01266 FAD dependent oxidoreductase JKJ11_17765 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JKJ11_17770 PF01791 DeoC/LacD family aldolase JKJ11_17775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_17775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_17780 PF00465 Iron-containing alcohol dehydrogenase JKJ11_17785 PF00171 Aldehyde dehydrogenase family JKJ11_17790 PF02412 Thrombospondin type 3 repeat JKJ11_17790 PF03422 Carbohydrate binding module (family 6) JKJ11_17805 PF00583 Acetyltransferase (GNAT) family JKJ11_17810 PF03193 RsgA GTPase JKJ11_17820 PF08361 MAATS-type transcriptional repressor, C-terminal region JKJ11_17820 PF00440 Bacterial regulatory proteins, tetR family JKJ11_17840 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_17840 PF08521 Two-component sensor kinase N-terminal JKJ11_17845 PF00072 Response regulator receiver domain JKJ11_17845 PF00486 Transcriptional regulatory protein, C terminal JKJ11_17850 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_17855 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_17860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_17865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_17865 PF00005 ABC transporter JKJ11_17870 PF00005 ABC transporter JKJ11_17870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_17875 PF01554 MatE JKJ11_17885 PF09339 IclR helix-turn-helix domain JKJ11_17885 PF01614 Bacterial transcriptional regulator JKJ11_17895 PF00005 ABC transporter JKJ11_17900 PF12704 MacB-like periplasmic core domain JKJ11_17900 PF02687 FtsX-like permease family JKJ11_17915 PF01875 Memo-like protein JKJ11_17925 PF07690 Major Facilitator Superfamily JKJ11_17930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_17930 PF00381 PTS HPr component phosphorylation site JKJ11_17930 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_17930 PF00391 PEP-utilising enzyme, mobile domain JKJ11_17930 PF05524 PEP-utilising enzyme, N-terminal JKJ11_17935 PF01074 Glycosyl hydrolases family 38 N-terminal domain JKJ11_17935 PF09261 Alpha mannosidase middle domain JKJ11_17935 PF07748 Glycosyl hydrolases family 38 C-terminal domain JKJ11_17940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_17945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_17965 PF07690 Major Facilitator Superfamily JKJ11_17980 PF00893 Small Multidrug Resistance protein JKJ11_17990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_17995 PF04993 TfoX N-terminal domain JKJ11_17995 PF04994 TfoX C-terminal domain JKJ11_18010 PF00005 ABC transporter JKJ11_18010 PF00571 CBS domain JKJ11_18015 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_18030 PF03466 LysR substrate binding domain JKJ11_18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_18055 PF00248 Aldo/keto reductase family JKJ11_18060 PF08525 Opacity-associated protein A N-terminal motif JKJ11_18060 PF01551 Peptidase family M23 JKJ11_18060 PF01476 LysM domain JKJ11_18075 PF02769 AIR synthase related protein, C-terminal domain JKJ11_18075 PF00586 AIR synthase related protein, N-terminal domain JKJ11_18080 PF00158 Sigma-54 interaction domain JKJ11_18080 PF13188 PAS domain JKJ11_18080 PF02954 Bacterial regulatory protein, Fis family JKJ11_18085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JKJ11_18085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JKJ11_18090 PF01799 [2Fe-2S] binding domain JKJ11_18090 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_18095 PF00860 Permease family JKJ11_18100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JKJ11_18100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JKJ11_18105 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_18110 PF01546 Peptidase family M20/M25/M40 JKJ11_18110 PF07687 Peptidase dimerisation domain JKJ11_18115 PF01979 Amidohydrolase family JKJ11_18120 PF00696 Amino acid kinase family JKJ11_18125 PF00005 ABC transporter JKJ11_18130 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_18135 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_18140 PF12849 PBP superfamily domain JKJ11_18150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_18150 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_18150 PF01627 Hpt domain JKJ11_18150 PF00072 Response regulator receiver domain JKJ11_18150 PF00672 HAMP domain JKJ11_18150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_18155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JKJ11_18155 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_18165 PF02811 PHP domain JKJ11_18185 PF08808 RES domain JKJ11_18190 PF01043 SecA preprotein cross-linking domain JKJ11_18190 PF07517 SecA DEAD-like domain JKJ11_18190 PF02810 SEC-C motif JKJ11_18190 PF07516 SecA Wing and Scaffold domain JKJ11_18255 PF00583 Acetyltransferase (GNAT) family JKJ11_18270 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_18270 PF14602 Hexapeptide repeat of succinyl-transferase JKJ11_18270 PF12804 MobA-like NTP transferase domain JKJ11_18275 PF13673 Acetyltransferase (GNAT) domain JKJ11_18280 PF00795 Carbon-nitrogen hydrolase JKJ11_18295 PF13302 Acetyltransferase (GNAT) domain JKJ11_18320 PF00795 Carbon-nitrogen hydrolase JKJ11_18325 PF05656 Protein of unknown function (DUF805) JKJ11_18340 PF00583 Acetyltransferase (GNAT) family JKJ11_18345 PF01566 Natural resistance-associated macrophage protein JKJ11_18350 PF04463 Protein of unknown function (DUF523) JKJ11_18385 PF01204 Trehalase JKJ11_18390 PF02625 XdhC and CoxI family JKJ11_18390 PF13478 XdhC Rossmann domain JKJ11_18400 PF12804 MobA-like NTP transferase domain JKJ11_18405 PF00941 FAD binding domain in molybdopterin dehydrogenase JKJ11_18410 PF01799 [2Fe-2S] binding domain JKJ11_18410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JKJ11_18410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JKJ11_18415 PF01979 Amidohydrolase family JKJ11_18420 PF00860 Permease family JKJ11_18425 PF01047 MarR family JKJ11_18430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JKJ11_18430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_18435 PF01979 Amidohydrolase family JKJ11_18440 PF00884 Sulfatase JKJ11_18445 PF00884 Sulfatase JKJ11_18450 PF13361 UvrD-like helicase C-terminal domain JKJ11_18450 PF12462 DNA helicase IV / RNA helicase N terminal JKJ11_18450 PF00580 UvrD/REP helicase N-terminal domain JKJ11_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_18455 PF00672 HAMP domain JKJ11_18455 PF12729 Four helix bundle sensory module for signal transduction JKJ11_18460 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_18465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JKJ11_18465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JKJ11_18475 PF00691 OmpA family JKJ11_18475 PF05736 OprF membrane domain JKJ11_18480 PF01268 Formate--tetrahydrofolate ligase JKJ11_18485 PF00294 pfkB family carbohydrate kinase JKJ11_18490 PF08448 PAS fold JKJ11_18490 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_18505 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_18515 PF01797 Transposase IS200 like JKJ11_18520 PF16591 Helical bimodular sensor domain JKJ11_18520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_18520 PF00672 HAMP domain JKJ11_18525 PF03222 Tryptophan/tyrosine permease family JKJ11_18535 PF03831 PhnA domain JKJ11_18535 PF08274 PhnA Zinc-Ribbon JKJ11_18540 PF00703 Glycosyl hydrolases family 2 JKJ11_18540 PF02837 Glycosyl hydrolases family 2, sugar binding domain JKJ11_18540 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain JKJ11_18545 PF00682 HMGL-like JKJ11_18550 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_18555 PF01039 Carboxyl transferase domain JKJ11_18560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JKJ11_18560 PF02770 Acyl-CoA dehydrogenase, middle domain JKJ11_18560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JKJ11_18565 PF09278 MerR, DNA binding JKJ11_18565 PF00376 MerR family regulatory protein JKJ11_18570 PF00108 Thiolase, N-terminal domain JKJ11_18570 PF02803 Thiolase, C-terminal domain JKJ11_18575 PF00171 Aldehyde dehydrogenase family JKJ11_18580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JKJ11_18580 PF02770 Acyl-CoA dehydrogenase, middle domain JKJ11_18580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JKJ11_18585 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_18590 PF00378 Enoyl-CoA hydratase/isomerase JKJ11_18595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JKJ11_18595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_18610 PF01012 Electron transfer flavoprotein domain JKJ11_18615 PF00766 Electron transfer flavoprotein FAD-binding domain JKJ11_18615 PF01012 Electron transfer flavoprotein domain JKJ11_18620 PF13649 Methyltransferase domain JKJ11_18630 PF00293 NUDIX domain JKJ11_18640 PF03060 Nitronate monooxygenase JKJ11_18650 PF00364 Biotin-requiring enzyme JKJ11_18650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JKJ11_18650 PF02817 e3 binding domain JKJ11_18655 PF02780 Transketolase, C-terminal domain JKJ11_18655 PF02779 Transketolase, pyrimidine binding domain JKJ11_18660 PF00676 Dehydrogenase E1 component JKJ11_18665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_18670 PF03466 LysR substrate binding domain JKJ11_18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_18675 PF00155 Aminotransferase class I and II JKJ11_18680 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_18680 PF00107 Zinc-binding dehydrogenase JKJ11_18695 PF08264 Anticodon-binding domain of tRNA JKJ11_18695 PF00133 tRNA synthetases class I (I, L, M and V) JKJ11_18715 PF11756 Nitrous oxide-stimulated promoter JKJ11_18765 PF01292 Prokaryotic cytochrome b561 JKJ11_18770 PF04264 YceI-like domain JKJ11_18780 PF01226 Formate/nitrite transporter JKJ11_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_18785 PF03466 LysR substrate binding domain JKJ11_18790 PF06496 Protein of unknown function (DUF1097) JKJ11_18795 PF11398 Protein of unknown function (DUF2813) JKJ11_18800 PF02872 5'-nucleotidase, C-terminal domain JKJ11_18800 PF00149 Calcineurin-like phosphoesterase JKJ11_18815 PF04363 Protein of unknown function (DUF496) JKJ11_18825 PF04337 Protein of unknown function, DUF480 JKJ11_18830 PF01541 GIY-YIG catalytic domain JKJ11_18835 PF13407 Periplasmic binding protein domain JKJ11_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_18840 PF09308 LuxQ, periplasmic JKJ11_18840 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_18840 PF00072 Response regulator receiver domain JKJ11_18855 PF12805 FUSC-like inner membrane protein yccS JKJ11_18860 PF01926 50S ribosome-binding GTPase JKJ11_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_18865 PF03466 LysR substrate binding domain JKJ11_18900 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_18900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_18910 PF04143 Sulphur transport JKJ11_18925 PF13597 Anaerobic ribonucleoside-triphosphate reductase JKJ11_18925 PF03477 ATP cone domain JKJ11_18935 PF00155 Aminotransferase class I and II JKJ11_18940 PF08443 RimK-like ATP-grasp domain JKJ11_18940 PF18030 RimK PreATP-grasp domain JKJ11_18955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JKJ11_18955 PF07685 CobB/CobQ-like glutamine amidotransferase domain JKJ11_18965 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_18970 PF00005 ABC transporter JKJ11_18970 PF03459 TOBE domain JKJ11_18980 PF17151 Periplasmic sensor domain JKJ11_18980 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_18990 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_19000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JKJ11_19000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JKJ11_19000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JKJ11_19005 PF02233 NAD(P) transhydrogenase beta subunit JKJ11_19015 PF00486 Transcriptional regulatory protein, C terminal JKJ11_19015 PF00072 Response regulator receiver domain JKJ11_19030 PF03701 Uncharacterised protein family (UPF0181) JKJ11_19035 PF01253 Translation initiation factor SUI1 JKJ11_19050 PF01820 D-ala D-ala ligase N-terminus JKJ11_19050 PF07478 D-ala D-ala ligase C-terminus JKJ11_19055 PF05036 Sporulation related domain JKJ11_19060 PF13380 CoA binding domain JKJ11_19060 PF00583 Acetyltransferase (GNAT) family JKJ11_19060 PF13607 Succinyl-CoA ligase like flavodoxin domain JKJ11_19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_19065 PF03466 LysR substrate binding domain JKJ11_19070 PF07715 TonB-dependent Receptor Plug Domain JKJ11_19070 PF00593 TonB dependent receptor JKJ11_19105 PF00989 PAS fold JKJ11_19105 PF00072 Response regulator receiver domain JKJ11_19105 PF01627 Hpt domain JKJ11_19105 PF18415 Histidine kinase receptor ArcB trans-membrane domain JKJ11_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_19105 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_19110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JKJ11_19115 PF02142 MGS-like domain JKJ11_19120 PF00561 alpha/beta hydrolase fold JKJ11_19120 PF00364 Biotin-requiring enzyme JKJ11_19125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_19125 PF00072 Response regulator receiver domain JKJ11_19125 PF00672 HAMP domain JKJ11_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_19125 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_19125 PF01627 Hpt domain JKJ11_19135 PF02566 OsmC-like protein JKJ11_19140 PF01625 Peptide methionine sulfoxide reductase JKJ11_19140 PF01641 SelR domain JKJ11_19145 PF00924 Mechanosensitive ion channel JKJ11_19155 PF00793 DAHP synthetase I family JKJ11_19160 PF18081 Fanconi anemia-associated nuclease SAP domain JKJ11_19160 PF08774 VRR-NUC domain JKJ11_19165 PF01575 MaoC like domain JKJ11_19175 PF00881 Nitroreductase family JKJ11_19180 PF16527 Two-component sensor protein CpxA, periplasmic domain JKJ11_19180 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_19180 PF00672 HAMP domain JKJ11_19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_19185 PF00072 Response regulator receiver domain JKJ11_19185 PF00486 Transcriptional regulatory protein, C terminal JKJ11_19195 PF00360 Phytochrome region JKJ11_19195 PF00563 EAL domain JKJ11_19195 PF01590 GAF domain JKJ11_19195 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_19200 PF00478 IMP dehydrogenase / GMP reductase domain JKJ11_19205 PF03853 YjeF-related protein N-terminus JKJ11_19205 PF01256 Carbohydrate kinase JKJ11_19220 PF00034 Cytochrome c JKJ11_19220 PF03150 Di-haem cytochrome c peroxidase JKJ11_19235 PF01389 OmpA-like transmembrane domain JKJ11_19235 PF00691 OmpA family JKJ11_19240 PF01053 Cys/Met metabolism PLP-dependent enzyme JKJ11_19250 PF04266 ASCH domain JKJ11_19255 PF13476 AAA domain JKJ11_19260 PF00149 Calcineurin-like phosphoesterase JKJ11_19260 PF12320 Type 5 capsule protein repressor C-terminal domain JKJ11_19270 PF16527 Two-component sensor protein CpxA, periplasmic domain JKJ11_19270 PF00672 HAMP domain JKJ11_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_19270 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_19275 PF00072 Response regulator receiver domain JKJ11_19275 PF00486 Transcriptional regulatory protein, C terminal JKJ11_19280 PF00873 AcrB/AcrD/AcrF family JKJ11_19285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_19295 PF07687 Peptidase dimerisation domain JKJ11_19295 PF01546 Peptidase family M20/M25/M40 JKJ11_19305 PF03741 Integral membrane protein TerC family JKJ11_19315 PF00128 Alpha amylase, catalytic domain JKJ11_19320 PF12849 PBP superfamily domain JKJ11_19330 PF02321 Outer membrane efflux protein JKJ11_19335 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_19335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_19340 PF03412 Peptidase C39 family JKJ11_19340 PF00005 ABC transporter JKJ11_19340 PF00664 ABC transporter transmembrane region JKJ11_19355 PF12843 Putative quorum-sensing-regulated virulence factor JKJ11_19365 PF03471 Transporter associated domain JKJ11_19365 PF00999 Sodium/hydrogen exchanger family JKJ11_19365 PF02080 TrkA-C domain JKJ11_19370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JKJ11_19370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JKJ11_19375 PF00085 Thioredoxin JKJ11_19380 PF02311 AraC-like ligand binding domain JKJ11_19380 PF12833 Helix-turn-helix domain JKJ11_19390 PF03466 LysR substrate binding domain JKJ11_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_19400 PF08443 RimK-like ATP-grasp domain JKJ11_19400 PF18030 RimK PreATP-grasp domain JKJ11_19410 PF18030 RimK PreATP-grasp domain JKJ11_19410 PF08443 RimK-like ATP-grasp domain JKJ11_19415 PF16363 GDP-mannose 4,6 dehydratase JKJ11_19420 PF01494 FAD binding domain JKJ11_19430 PF00005 ABC transporter JKJ11_19435 PF13472 GDSL-like Lipase/Acylhydrolase family JKJ11_19440 PF12241 Trans-2-enoyl-CoA reductase catalytic region JKJ11_19440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JKJ11_19440 PF07055 Enoyl reductase FAD binding domain JKJ11_19445 PF00563 EAL domain JKJ11_19445 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_19445 PF03707 Bacterial signalling protein N terminal repeat JKJ11_19455 PF00226 DnaJ domain JKJ11_19455 PF01556 DnaJ C terminal domain JKJ11_19455 PF00684 DnaJ central domain JKJ11_19480 PF12793 Sugar transport-related sRNA regulator N-term JKJ11_19480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_19490 PF03061 Thioesterase superfamily JKJ11_19495 PF01435 Peptidase family M48 JKJ11_19495 PF07720 Tetratricopeptide repeat JKJ11_19510 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_19520 PF00871 Acetokinase family JKJ11_19525 PF03880 DbpA RNA binding domain JKJ11_19525 PF00270 DEAD/DEAH box helicase JKJ11_19525 PF00271 Helicase conserved C-terminal domain JKJ11_19530 PF08206 Ribonuclease B OB domain JKJ11_19530 PF00773 RNB domain JKJ11_19530 PF00575 S1 RNA binding domain JKJ11_19540 PF12849 PBP superfamily domain JKJ11_19545 PF01906 Putative heavy-metal-binding JKJ11_19550 PF18494 Pullulanase Ins domain JKJ11_19550 PF03714 Bacterial pullanase-associated domain JKJ11_19550 PF17967 Pullulanase N2 domain JKJ11_19550 PF11852 Domain of unknown function (DUF3372) JKJ11_19550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JKJ11_19590 PF05762 VWA domain containing CoxE-like protein JKJ11_19595 PF07728 AAA domain (dynein-related subfamily) JKJ11_19595 PF17868 AAA lid domain JKJ11_19595 PF12592 Protein of unknown function (DUF3763) JKJ11_19600 PF05762 VWA domain containing CoxE-like protein JKJ11_19610 PF01212 Beta-eliminating lyase JKJ11_19615 PF00034 Cytochrome c JKJ11_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_19620 PF03466 LysR substrate binding domain JKJ11_19635 PF01228 Glycine radical JKJ11_19635 PF02901 Pyruvate formate lyase-like JKJ11_19640 PF04055 Radical SAM superfamily JKJ11_19650 PF00271 Helicase conserved C-terminal domain JKJ11_19650 PF00270 DEAD/DEAH box helicase JKJ11_19655 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JKJ11_19660 PF00857 Isochorismatase family JKJ11_19665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JKJ11_19665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JKJ11_19675 PF04336 Acyl carrier protein phosphodiesterase JKJ11_19680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JKJ11_19695 PF05524 PEP-utilising enzyme, N-terminal JKJ11_19695 PF00391 PEP-utilising enzyme, mobile domain JKJ11_19695 PF02896 PEP-utilising enzyme, TIM barrel domain JKJ11_19700 PF02734 DAK2 domain JKJ11_19705 PF02733 Dak1 domain JKJ11_19710 PF00465 Iron-containing alcohol dehydrogenase JKJ11_19735 PF00155 Aminotransferase class I and II JKJ11_19740 PF02378 Phosphotransferase system, EIIC JKJ11_19740 PF00367 phosphotransferase system, EIIB JKJ11_19745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JKJ11_19745 PF00356 Bacterial regulatory proteins, lacI family JKJ11_19750 PF07969 Amidohydrolase family JKJ11_19755 PF01810 LysE type translocator JKJ11_19760 PF12833 Helix-turn-helix domain JKJ11_19765 PF00989 PAS fold JKJ11_19765 PF00158 Sigma-54 interaction domain JKJ11_19765 PF02954 Bacterial regulatory protein, Fis family JKJ11_19775 PF01055 Glycosyl hydrolases family 31 JKJ11_19780 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_19785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_19795 PF01116 Fructose-bisphosphate aldolase class-II JKJ11_19805 PF01263 Aldose 1-epimerase JKJ11_19810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JKJ11_19810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_19815 PF00294 pfkB family carbohydrate kinase JKJ11_19820 PF00455 DeoR C terminal sensor domain JKJ11_19820 PF08220 DeoR-like helix-turn-helix domain JKJ11_19860 PF01136 Peptidase family U32 JKJ11_19865 PF07690 Major Facilitator Superfamily JKJ11_19890 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JKJ11_19900 PF00171 Aldehyde dehydrogenase family JKJ11_19905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JKJ11_19920 PF00171 Aldehyde dehydrogenase family JKJ11_19925 PF01557 Fumarylacetoacetate (FAA) hydrolase family JKJ11_19930 PF01557 Fumarylacetoacetate (FAA) hydrolase family JKJ11_19935 PF03328 HpcH/HpaI aldolase/citrate lyase family JKJ11_19940 PF01557 Fumarylacetoacetate (FAA) hydrolase family JKJ11_19945 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_19950 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_19955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_19960 PF01047 MarR family JKJ11_19965 PF01613 Flavin reductase like domain JKJ11_19975 PF00313 'Cold-shock' DNA-binding domain JKJ11_19990 PF00970 Oxidoreductase FAD-binding domain JKJ11_19990 PF00042 Globin JKJ11_19990 PF00175 Oxidoreductase NAD-binding domain JKJ11_19995 PF01590 GAF domain JKJ11_19995 PF00158 Sigma-54 interaction domain JKJ11_20005 PF00958 GMP synthase C terminal domain JKJ11_20005 PF00117 Glutamine amidotransferase class-I JKJ11_20010 PF00171 Aldehyde dehydrogenase family JKJ11_20015 PF00202 Aminotransferase class-III JKJ11_20025 PF00171 Aldehyde dehydrogenase family JKJ11_20035 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20040 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20045 PF08402 TOBE domain JKJ11_20045 PF00005 ABC transporter JKJ11_20050 PF13416 Bacterial extracellular solute-binding protein JKJ11_20055 PF00202 Aminotransferase class-III JKJ11_20060 PF00120 Glutamine synthetase, catalytic domain JKJ11_20065 PF00120 Glutamine synthetase, catalytic domain JKJ11_20070 PF01266 FAD dependent oxidoreductase JKJ11_20075 PF01966 HD domain JKJ11_20075 PF00072 Response regulator receiver domain JKJ11_20080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_20080 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_20085 PF12849 PBP superfamily domain JKJ11_20090 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20095 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20100 PF00005 ABC transporter JKJ11_20110 PF08007 Cupin superfamily protein JKJ11_20120 PF07670 Nucleoside recognition JKJ11_20125 PF07670 Nucleoside recognition JKJ11_20130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_20130 PF00672 HAMP domain JKJ11_20130 PF12729 Four helix bundle sensory module for signal transduction JKJ11_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20135 PF03466 LysR substrate binding domain JKJ11_20145 PF00005 ABC transporter JKJ11_20145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_20150 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20150 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_20155 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_20165 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_20180 PF13460 NAD(P)H-binding JKJ11_20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20185 PF03466 LysR substrate binding domain JKJ11_20190 PF14310 Fibronectin type III-like domain JKJ11_20190 PF01915 Glycosyl hydrolase family 3 C-terminal domain JKJ11_20190 PF00933 Glycosyl hydrolase family 3 N terminal domain JKJ11_20195 PF00005 ABC transporter JKJ11_20195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_20200 PF00005 ABC transporter JKJ11_20200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_20205 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20205 PF12911 N-terminal TM domain of oligopeptide transport permease C JKJ11_20210 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_20220 PF00005 ABC transporter JKJ11_20220 PF00664 ABC transporter transmembrane region JKJ11_20245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_20245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_20250 PF02653 Branched-chain amino acid transport system / permease component JKJ11_20255 PF00005 ABC transporter JKJ11_20260 PF13407 Periplasmic binding protein domain JKJ11_20270 PF12833 Helix-turn-helix domain JKJ11_20280 PF00704 Glycosyl hydrolases family 18 JKJ11_20285 PF13404 AsnC-type helix-turn-helix domain JKJ11_20285 PF01037 Lrp/AsnC ligand binding domain JKJ11_20300 PF00005 ABC transporter JKJ11_20305 PF00155 Aminotransferase class I and II JKJ11_20305 PF00392 Bacterial regulatory proteins, gntR family JKJ11_20315 PF01161 Phosphatidylethanolamine-binding protein JKJ11_20325 PF02635 DsrE/DsrF-like family JKJ11_20360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_20360 PF12793 Sugar transport-related sRNA regulator N-term JKJ11_20365 PF00232 Glycosyl hydrolase family 1 JKJ11_20370 PF09264 Vibrio cholerae sialidase, lectin insertion JKJ11_20370 PF13088 BNR repeat-like domain JKJ11_20375 PF00356 Bacterial regulatory proteins, lacI family JKJ11_20380 PF00356 Bacterial regulatory proteins, lacI family JKJ11_20385 PF00232 Glycosyl hydrolase family 1 JKJ11_20400 PF00005 ABC transporter JKJ11_20400 PF17912 MalK OB fold domain JKJ11_20400 PF03459 TOBE domain JKJ11_20405 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20410 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_20420 PF00759 Glycosyl hydrolase family 9 JKJ11_20420 PF02927 Cellulase N-terminal ig-like domain JKJ11_20425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JKJ11_20425 PF00356 Bacterial regulatory proteins, lacI family JKJ11_20430 PF00381 PTS HPr component phosphorylation site JKJ11_20430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_20435 PF00294 pfkB family carbohydrate kinase JKJ11_20440 PF02378 Phosphotransferase system, EIIC JKJ11_20440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_20460 PF01571 Aminomethyltransferase folate-binding domain JKJ11_20460 PF08669 Glycine cleavage T-protein C-terminal barrel domain JKJ11_20470 PF00464 Serine hydroxymethyltransferase JKJ11_20475 PF01597 Glycine cleavage H-protein JKJ11_20480 PF02347 Glycine cleavage system P-protein JKJ11_20490 PF08534 Redoxin JKJ11_20500 PF01081 KDPG and KHG aldolase JKJ11_20510 PF13378 Enolase C-terminal domain-like JKJ11_20510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JKJ11_20515 PF01970 Tripartite tricarboxylate transporter TctA family JKJ11_20525 PF03401 Tripartite tricarboxylate transporter family receptor JKJ11_20530 PF09339 IclR helix-turn-helix domain JKJ11_20530 PF01614 Bacterial transcriptional regulator JKJ11_20540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JKJ11_20540 PF02806 Alpha amylase, C-terminal all-beta domain JKJ11_20540 PF00128 Alpha amylase, catalytic domain JKJ11_20545 PF00356 Bacterial regulatory proteins, lacI family JKJ11_20560 PF17848 Acetyl-coA carboxylase zinc finger domain JKJ11_20560 PF01039 Carboxyl transferase domain JKJ11_20565 PF03466 LysR substrate binding domain JKJ11_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20575 PF00005 ABC transporter JKJ11_20575 PF12704 MacB-like periplasmic core domain JKJ11_20575 PF02687 FtsX-like permease family JKJ11_20580 PF12704 MacB-like periplasmic core domain JKJ11_20580 PF02687 FtsX-like permease family JKJ11_20580 PF00005 ABC transporter JKJ11_20585 PF02687 FtsX-like permease family JKJ11_20585 PF12704 MacB-like periplasmic core domain JKJ11_20600 PF00271 Helicase conserved C-terminal domain JKJ11_20600 PF00270 DEAD/DEAH box helicase JKJ11_20605 PF00860 Permease family JKJ11_20610 PF00392 Bacterial regulatory proteins, gntR family JKJ11_20610 PF07702 UTRA domain JKJ11_20620 PF00294 pfkB family carbohydrate kinase JKJ11_20625 PF03747 ADP-ribosylglycohydrolase JKJ11_20630 PF03825 Nucleoside H+ symporter JKJ11_20645 PF07702 UTRA domain JKJ11_20645 PF00392 Bacterial regulatory proteins, gntR family JKJ11_20650 PF13378 Enolase C-terminal domain-like JKJ11_20650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JKJ11_20655 PF02378 Phosphotransferase system, EIIC JKJ11_20655 PF00367 phosphotransferase system, EIIB JKJ11_20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20660 PF03466 LysR substrate binding domain JKJ11_20665 PF08803 Putative mono-oxygenase ydhR JKJ11_20680 PF11742 Protein of unknown function (DUF3302) JKJ11_20685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_20685 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_20695 PF03466 LysR substrate binding domain JKJ11_20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JKJ11_20730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_20735 PF00141 Peroxidase JKJ11_20745 PF05175 Methyltransferase small domain JKJ11_20750 PF02311 AraC-like ligand binding domain JKJ11_20750 PF12833 Helix-turn-helix domain JKJ11_20755 PF00580 UvrD/REP helicase N-terminal domain JKJ11_20755 PF13361 UvrD-like helicase C-terminal domain JKJ11_20760 PF13187 4Fe-4S dicluster domain JKJ11_20760 PF01645 Conserved region in glutamate synthase JKJ11_20765 PF00392 Bacterial regulatory proteins, gntR family JKJ11_20765 PF07702 UTRA domain JKJ11_20770 PF00232 Glycosyl hydrolase family 1 JKJ11_20775 PF00196 Bacterial regulatory proteins, luxR family JKJ11_20775 PF00072 Response regulator receiver domain JKJ11_20780 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JKJ11_20780 PF00672 HAMP domain JKJ11_20780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_20780 PF07730 Histidine kinase JKJ11_20795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JKJ11_20795 PF00384 Molybdopterin oxidoreductase JKJ11_20795 PF01568 Molydopterin dinucleotide binding domain JKJ11_20800 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JKJ11_20805 PF03264 NapC/NirT cytochrome c family, N-terminal region JKJ11_20815 PF01966 HD domain JKJ11_20820 PF07549 SecD/SecF GG Motif JKJ11_20820 PF02355 Protein export membrane protein JKJ11_20825 PF13721 SecD export protein N-terminal TM region JKJ11_20825 PF02355 Protein export membrane protein JKJ11_20825 PF07549 SecD/SecF GG Motif JKJ11_20850 PF00360 Phytochrome region JKJ11_20850 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_20850 PF01590 GAF domain JKJ11_20850 PF00563 EAL domain JKJ11_20880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_20885 PF00246 Zinc carboxypeptidase JKJ11_20900 PF00085 Thioredoxin JKJ11_20900 PF02683 Cytochrome C biogenesis protein transmembrane region JKJ11_20900 PF11412 Disulphide bond corrector protein DsbC JKJ11_20905 PF00578 AhpC/TSA family JKJ11_20910 PF13462 Thioredoxin JKJ11_20910 PF06965 Na+/H+ antiporter 1 JKJ11_20915 PF03466 LysR substrate binding domain JKJ11_20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_20920 PF01554 MatE JKJ11_20925 PF03831 PhnA domain JKJ11_20925 PF08274 PhnA Zinc-Ribbon JKJ11_20930 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JKJ11_20940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_20945 PF01243 Pyridoxamine 5'-phosphate oxidase JKJ11_20950 PF06228 Haem utilisation ChuX/HutX JKJ11_20955 PF04055 Radical SAM superfamily JKJ11_20960 PF03544 Gram-negative bacterial TonB protein C-terminal JKJ11_20965 PF01618 MotA/TolQ/ExbB proton channel family JKJ11_20970 PF02472 Biopolymer transport protein ExbD/TolR JKJ11_20980 PF01032 FecCD transport family JKJ11_20985 PF00005 ABC transporter JKJ11_21020 PF03466 LysR substrate binding domain JKJ11_21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_21025 PF02652 L-lactate permease JKJ11_21030 PF02754 Cysteine-rich domain JKJ11_21035 PF02589 LUD domain JKJ11_21035 PF13183 4Fe-4S dicluster domain JKJ11_21035 PF11870 Domain of unknown function (DUF3390) JKJ11_21040 PF02589 LUD domain JKJ11_21050 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_21060 PF03411 Penicillin-insensitive murein endopeptidase JKJ11_21065 PF00962 Adenosine/AMP deaminase JKJ11_21070 PF00232 Glycosyl hydrolase family 1 JKJ11_21075 PF00480 ROK family JKJ11_21080 PF00480 ROK family JKJ11_21085 PF05726 Pirin C-terminal cupin domain JKJ11_21085 PF02678 Pirin JKJ11_21090 PF06865 Pyrimidine/purine nucleoside phosphorylase JKJ11_21095 PF03109 ABC1 family JKJ11_21105 PF01569 PAP2 superfamily JKJ11_21115 PF00072 Response regulator receiver domain JKJ11_21115 PF09308 LuxQ, periplasmic JKJ11_21115 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_21120 PF17200 Single Cache domain 2 JKJ11_21120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_21120 PF00672 HAMP domain JKJ11_21140 PF01497 Periplasmic binding protein JKJ11_21145 PF01032 FecCD transport family JKJ11_21150 PF01032 FecCD transport family JKJ11_21155 PF00005 ABC transporter JKJ11_21165 PF00962 Adenosine/AMP deaminase JKJ11_21190 PF12706 Beta-lactamase superfamily domain JKJ11_21200 PF00005 ABC transporter JKJ11_21205 PF00497 Bacterial extracellular solute-binding proteins, family 3 JKJ11_21210 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21215 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21230 PF16884 N-terminal domain of oxidoreductase JKJ11_21230 PF00107 Zinc-binding dehydrogenase JKJ11_21235 PF00440 Bacterial regulatory proteins, tetR family JKJ11_21235 PF16925 Tetracyclin repressor-like, C-terminal domain JKJ11_21250 PF01042 Endoribonuclease L-PSP JKJ11_21260 PF08659 KR domain JKJ11_21260 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_21260 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_21260 PF16197 Ketoacyl-synthetase C-terminal extension JKJ11_21260 PF00107 Zinc-binding dehydrogenase JKJ11_21260 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_21260 PF00698 Acyl transferase domain JKJ11_21260 PF00550 Phosphopantetheine attachment site JKJ11_21260 PF14765 Polyketide synthase dehydratase JKJ11_21265 PF07690 Major Facilitator Superfamily JKJ11_21270 PF02734 DAK2 domain JKJ11_21270 PF02733 Dak1 domain JKJ11_21275 PF02733 Dak1 domain JKJ11_21280 PF02734 DAK2 domain JKJ11_21285 PF00158 Sigma-54 interaction domain JKJ11_21285 PF00989 PAS fold JKJ11_21285 PF02954 Bacterial regulatory protein, Fis family JKJ11_21290 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_21300 PF02492 CobW/HypB/UreG, nucleotide-binding domain JKJ11_21305 PF01730 UreF JKJ11_21315 PF05194 UreE urease accessory protein, C-terminal domain JKJ11_21315 PF02814 UreE urease accessory protein, N-terminal domain JKJ11_21320 PF00449 Urease alpha-subunit, N-terminal domain JKJ11_21320 PF01979 Amidohydrolase family JKJ11_21325 PF00699 Urease beta subunit JKJ11_21330 PF00547 Urease, gamma subunit JKJ11_21335 PF01774 UreD urease accessory protein JKJ11_21340 PF00005 ABC transporter JKJ11_21345 PF00005 ABC transporter JKJ11_21345 PF12399 Branched-chain amino acid ATP-binding cassette transporter JKJ11_21355 PF02653 Branched-chain amino acid transport system / permease component JKJ11_21365 PF01554 MatE JKJ11_21375 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_21400 PF03279 Bacterial lipid A biosynthesis acyltransferase JKJ11_21430 PF00196 Bacterial regulatory proteins, luxR family JKJ11_21430 PF00072 Response regulator receiver domain JKJ11_21435 PF00563 EAL domain JKJ11_21435 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_21435 PF08448 PAS fold JKJ11_21440 PF09456 RcsC Alpha-Beta-Loop (ABL) JKJ11_21440 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_21440 PF00072 Response regulator receiver domain JKJ11_21440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_21450 PF16970 Type-1 fimbrial protein, A JKJ11_21455 PF00577 Outer membrane usher protein JKJ11_21455 PF13954 PapC N-terminal domain JKJ11_21455 PF13953 PapC C-terminal domain JKJ11_21460 PF02753 Pili assembly chaperone PapD, C-terminal domain JKJ11_21460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JKJ11_21480 PF16458 Beta-prism lectin JKJ11_21480 PF12563 Hemolytic toxin N terminal JKJ11_21480 PF07968 Leukocidin/Hemolysin toxin family JKJ11_21495 PF01467 Cytidylyltransferase-like JKJ11_21500 PF02540 NAD synthase JKJ11_21510 PF00111 2Fe-2S iron-sulfur cluster binding domain JKJ11_21510 PF03476 MOSC N-terminal beta barrel domain JKJ11_21510 PF03473 MOSC domain JKJ11_21515 PF01979 Amidohydrolase family JKJ11_21545 PF03466 LysR substrate binding domain JKJ11_21545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_21550 PF00367 phosphotransferase system, EIIB JKJ11_21550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JKJ11_21550 PF02378 Phosphotransferase system, EIIC JKJ11_21555 PF00465 Iron-containing alcohol dehydrogenase JKJ11_21560 PF12833 Helix-turn-helix domain JKJ11_21580 PF00873 AcrB/AcrD/AcrF family JKJ11_21585 PF13533 Biotin-lipoyl like JKJ11_21590 PF01329 Pterin 4 alpha carbinolamine dehydratase JKJ11_21595 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JKJ11_21600 PF00501 AMP-binding enzyme JKJ11_21600 PF13193 AMP-binding enzyme C-terminal domain JKJ11_21605 PF00535 Glycosyl transferase family 2 JKJ11_21610 PF09335 SNARE associated Golgi protein JKJ11_21640 PF00795 Carbon-nitrogen hydrolase JKJ11_21660 PF06942 GlpM protein JKJ11_21670 PF00356 Bacterial regulatory proteins, lacI family JKJ11_21680 PF00005 ABC transporter JKJ11_21680 PF08402 TOBE domain JKJ11_21685 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21690 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21700 PF00128 Alpha amylase, catalytic domain JKJ11_21705 PF00534 Glycosyl transferases group 1 JKJ11_21710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JKJ11_21710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JKJ11_21710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JKJ11_21710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JKJ11_21715 PF00005 ABC transporter JKJ11_21715 PF08402 TOBE domain JKJ11_21720 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21725 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_21735 PF00480 ROK family JKJ11_21745 PF00534 Glycosyl transferases group 1 JKJ11_21755 PF00005 ABC transporter JKJ11_21760 PF01032 FecCD transport family JKJ11_21765 PF01032 FecCD transport family JKJ11_21770 PF01497 Periplasmic binding protein JKJ11_21775 PF00392 Bacterial regulatory proteins, gntR family JKJ11_21775 PF07702 UTRA domain JKJ11_21780 PF05661 Protein of unknown function (DUF808) JKJ11_21795 PF03466 LysR substrate binding domain JKJ11_21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_21800 PF07690 Major Facilitator Superfamily JKJ11_21810 PF07690 Major Facilitator Superfamily JKJ11_21820 PF16326 ABC transporter C-terminal domain JKJ11_21820 PF12848 ABC transporter JKJ11_21820 PF00005 ABC transporter JKJ11_21825 PF00155 Aminotransferase class I and II JKJ11_21830 PF04542 Sigma-70 region 2 JKJ11_21830 PF08281 Sigma-70, region 4 JKJ11_21850 PF04225 Opacity-associated protein A LysM-like domain JKJ11_21850 PF01551 Peptidase family M23 JKJ11_21865 PF07670 Nucleoside recognition JKJ11_21880 PF00251 Glycosyl hydrolases family 32 N-terminal domain JKJ11_21880 PF08244 Glycosyl hydrolases family 32 C terminal JKJ11_21885 PF00367 phosphotransferase system, EIIB JKJ11_21885 PF02378 Phosphotransferase system, EIIC JKJ11_21890 PF00392 Bacterial regulatory proteins, gntR family JKJ11_21890 PF07702 UTRA domain JKJ11_21895 PF00356 Bacterial regulatory proteins, lacI family JKJ11_21895 PF13407 Periplasmic binding protein domain JKJ11_21900 PF00294 pfkB family carbohydrate kinase JKJ11_21910 PF01238 Phosphomannose isomerase type I JKJ11_21915 PF00202 Aminotransferase class-III JKJ11_21920 PF00171 Aldehyde dehydrogenase family JKJ11_21925 PF04371 Porphyromonas-type peptidyl-arginine deiminase JKJ11_21930 PF00795 Carbon-nitrogen hydrolase JKJ11_21935 PF01266 FAD dependent oxidoreductase JKJ11_21940 PF00171 Aldehyde dehydrogenase family JKJ11_21945 PF07883 Cupin domain JKJ11_21945 PF01381 Helix-turn-helix JKJ11_21950 PF07722 Peptidase C26 JKJ11_21955 PF00120 Glutamine synthetase, catalytic domain JKJ11_21960 PF03553 Na+/H+ antiporter family JKJ11_21965 PF00141 Peroxidase JKJ11_21980 PF00583 Acetyltransferase (GNAT) family JKJ11_21985 PF01470 Pyroglutamyl peptidase JKJ11_21995 PF07715 TonB-dependent Receptor Plug Domain JKJ11_21995 PF00593 TonB dependent receptor JKJ11_22000 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JKJ11_22005 PF06276 Ferric iron reductase FhuF-like transporter JKJ11_22005 PF04183 IucA / IucC family JKJ11_22015 PF06276 Ferric iron reductase FhuF-like transporter JKJ11_22015 PF04183 IucA / IucC family JKJ11_22020 PF06276 Ferric iron reductase FhuF-like transporter JKJ11_22020 PF04183 IucA / IucC family JKJ11_22025 PF01032 FecCD transport family JKJ11_22030 PF01497 Periplasmic binding protein JKJ11_22035 PF00005 ABC transporter JKJ11_22045 PF00194 Eukaryotic-type carbonic anhydrase JKJ11_22055 PF08450 SMP-30/Gluconolactonase/LRE-like region JKJ11_22060 PF00924 Mechanosensitive ion channel JKJ11_22075 PF00465 Iron-containing alcohol dehydrogenase JKJ11_22085 PF04542 Sigma-70 region 2 JKJ11_22085 PF08281 Sigma-70, region 4 JKJ11_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_22105 PF03466 LysR substrate binding domain JKJ11_22110 PF01047 MarR family JKJ11_22115 PF02566 OsmC-like protein JKJ11_22120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JKJ11_22125 PF16124 RecQ zinc-binding JKJ11_22125 PF00270 DEAD/DEAH box helicase JKJ11_22125 PF09382 RQC domain JKJ11_22125 PF00271 Helicase conserved C-terminal domain JKJ11_22125 PF00570 HRDC domain JKJ11_22130 PF01274 Malate synthase JKJ11_22135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_22135 PF03466 LysR substrate binding domain JKJ11_22140 PF00463 Isocitrate lyase family JKJ11_22155 PF10952 Protein of unknown function (DUF2753) JKJ11_22160 PF01197 Ribosomal protein L31 JKJ11_22165 PF00444 Ribosomal protein L36 JKJ11_22170 PF01979 Amidohydrolase family JKJ11_22175 PF01380 SIS domain JKJ11_22180 PF00455 DeoR C terminal sensor domain JKJ11_22180 PF08220 DeoR-like helix-turn-helix domain JKJ11_22185 PF05068 Mannitol repressor JKJ11_22190 PF01232 Mannitol dehydrogenase Rossmann domain JKJ11_22190 PF08125 Mannitol dehydrogenase C-terminal domain JKJ11_22195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_22195 PF02378 Phosphotransferase system, EIIC JKJ11_22195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_22200 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_22205 PF12706 Beta-lactamase superfamily domain JKJ11_22210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JKJ11_22210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_22220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_22220 PF03466 LysR substrate binding domain JKJ11_22225 PF00583 Acetyltransferase (GNAT) family JKJ11_22230 PF00892 EamA-like transporter family JKJ11_22240 PF12793 Sugar transport-related sRNA regulator N-term JKJ11_22240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_22255 PF00106 short chain dehydrogenase JKJ11_22275 PF03786 D-mannonate dehydratase (UxuA) JKJ11_22280 PF00392 Bacterial regulatory proteins, gntR family JKJ11_22280 PF07729 FCD domain JKJ11_22285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JKJ11_22285 PF00703 Glycosyl hydrolases family 2 JKJ11_22285 PF02837 Glycosyl hydrolases family 2, sugar binding domain JKJ11_22285 PF16355 Domain of unknown function (DUF4982) JKJ11_22290 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_22295 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_22300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_22305 PF17137 Domain of unknown function (DUF5110) JKJ11_22305 PF13802 Galactose mutarotase-like JKJ11_22305 PF01055 Glycosyl hydrolases family 31 JKJ11_22305 PF16338 Domain of unknown function (DUF4968) JKJ11_22310 PF01232 Mannitol dehydrogenase Rossmann domain JKJ11_22310 PF08125 Mannitol dehydrogenase C-terminal domain JKJ11_22315 PF02614 Glucuronate isomerase JKJ11_22320 PF00294 pfkB family carbohydrate kinase JKJ11_22325 PF01081 KDPG and KHG aldolase JKJ11_22335 PF10688 Bacterial inner membrane protein JKJ11_22345 PF17200 Single Cache domain 2 JKJ11_22345 PF00672 HAMP domain JKJ11_22345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_22365 PF00196 Bacterial regulatory proteins, luxR family JKJ11_22365 PF00072 Response regulator receiver domain JKJ11_22370 PF00005 ABC transporter JKJ11_22370 PF03459 TOBE domain JKJ11_22370 PF17912 MalK OB fold domain JKJ11_22375 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_22380 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_22385 PF01547 Bacterial extracellular solute-binding protein JKJ11_22390 PF00356 Bacterial regulatory proteins, lacI family JKJ11_22395 PF00128 Alpha amylase, catalytic domain JKJ11_22400 PF01316 Arginine repressor, DNA binding domain JKJ11_22400 PF02863 Arginine repressor, C-terminal domain JKJ11_22405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JKJ11_22405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JKJ11_22410 PF00696 Amino acid kinase family JKJ11_22420 PF03606 C4-dicarboxylate anaerobic carrier JKJ11_22440 PF01966 HD domain JKJ11_22445 PF02567 Phenazine biosynthesis-like protein JKJ11_22460 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JKJ11_22465 PF00875 DNA photolyase JKJ11_22465 PF03441 FAD binding domain of DNA photolyase JKJ11_22470 PF03116 NQR2, RnfD, RnfE family JKJ11_22475 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_22480 PF00072 Response regulator receiver domain JKJ11_22485 PF00072 Response regulator receiver domain JKJ11_22500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JKJ11_22500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JKJ11_22505 PF00730 HhH-GPD superfamily base excision DNA repair protein JKJ11_22505 PF06029 AlkA N-terminal domain JKJ11_22515 PF17158 Membrane-associated sensor, integral membrane domain JKJ11_22515 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_22525 PF00474 Sodium:solute symporter family JKJ11_22530 PF06178 Oligogalacturonate-specific porin protein (KdgM) JKJ11_22535 PF14579 Helix-hairpin-helix motif JKJ11_22535 PF07733 Bacterial DNA polymerase III alpha NTPase domain JKJ11_22535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JKJ11_22535 PF02811 PHP domain JKJ11_22535 PF00929 Exonuclease JKJ11_22540 PF00571 CBS domain JKJ11_22545 PF07729 FCD domain JKJ11_22545 PF00392 Bacterial regulatory proteins, gntR family JKJ11_22550 PF00392 Bacterial regulatory proteins, gntR family JKJ11_22550 PF07729 FCD domain JKJ11_22560 PF13977 BetI-type transcriptional repressor, C-terminal JKJ11_22560 PF00440 Bacterial regulatory proteins, tetR family JKJ11_22565 PF00171 Aldehyde dehydrogenase family JKJ11_22570 PF00732 GMC oxidoreductase JKJ11_22570 PF05199 GMC oxidoreductase JKJ11_22575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JKJ11_22580 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_22585 PF00571 CBS domain JKJ11_22585 PF00005 ABC transporter JKJ11_22590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_22590 PF00672 HAMP domain JKJ11_22600 PF07940 Heparinase II/III-like protein JKJ11_22600 PF05426 Alginate lyase JKJ11_22605 PF07940 Heparinase II/III-like protein JKJ11_22605 PF05426 Alginate lyase JKJ11_22610 PF07883 Cupin domain JKJ11_22615 PF00294 pfkB family carbohydrate kinase JKJ11_22620 PF01081 KDPG and KHG aldolase JKJ11_22625 PF00474 Sodium:solute symporter family JKJ11_22630 PF00892 EamA-like transporter family JKJ11_22640 PF07859 alpha/beta hydrolase fold JKJ11_22640 PF13472 GDSL-like Lipase/Acylhydrolase family JKJ11_22660 PF09339 IclR helix-turn-helix domain JKJ11_22660 PF01614 Bacterial transcriptional regulator JKJ11_22665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_22670 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_22675 PF07470 Glycosyl Hydrolase Family 88 JKJ11_22680 PF00356 Bacterial regulatory proteins, lacI family JKJ11_22685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JKJ11_22690 PF03466 LysR substrate binding domain JKJ11_22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_22700 PF01124 MAPEG family JKJ11_22730 PF08359 YsiA-like protein, C-terminal region JKJ11_22730 PF00440 Bacterial regulatory proteins, tetR family JKJ11_22735 PF00128 Alpha amylase, catalytic domain JKJ11_22735 PF02806 Alpha amylase, C-terminal all-beta domain JKJ11_22735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JKJ11_22740 PF02446 4-alpha-glucanotransferase JKJ11_22745 PF00343 Carbohydrate phosphorylase JKJ11_22750 PF17874 MalT-like TPR region JKJ11_22750 PF00196 Bacterial regulatory proteins, luxR family JKJ11_22775 PF03412 Peptidase C39 family JKJ11_22775 PF00005 ABC transporter JKJ11_22775 PF00664 ABC transporter transmembrane region JKJ11_22790 PF02794 RTX toxin acyltransferase family JKJ11_22800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_22800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_22805 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_22810 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_22815 PF01266 FAD dependent oxidoreductase JKJ11_22830 PF03601 Conserved hypothetical protein 698 JKJ11_22835 PF00205 Thiamine pyrophosphate enzyme, central domain JKJ11_22835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JKJ11_22835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JKJ11_22840 PF07728 AAA domain (dynein-related subfamily) JKJ11_22840 PF08406 CbbQ/NirQ/NorQ C-terminal JKJ11_22840 PF12556 Cobaltochelatase CobS subunit N terminal JKJ11_22845 PF06213 Cobalamin biosynthesis protein CobT JKJ11_22845 PF11775 Cobalamin biosynthesis protein CobT VWA domain JKJ11_22850 PF02615 Malate/L-lactate dehydrogenase JKJ11_22855 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_22860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_22865 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_22870 PF00596 Class II Aldolase and Adducin N-terminal domain JKJ11_22885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_22885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_22890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JKJ11_22895 PF09339 IclR helix-turn-helix domain JKJ11_22895 PF01614 Bacterial transcriptional regulator JKJ11_22900 PF01261 Xylose isomerase-like TIM barrel JKJ11_22920 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_22925 PF01925 Sulfite exporter TauE/SafE JKJ11_22930 PF01515 Phosphate acetyl/butaryl transferase JKJ11_22935 PF09339 IclR helix-turn-helix domain JKJ11_22935 PF01614 Bacterial transcriptional regulator JKJ11_22940 PF13599 Pentapeptide repeats (9 copies) JKJ11_22945 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_22950 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_22960 PF00005 ABC transporter JKJ11_22970 PF07690 Major Facilitator Superfamily JKJ11_22975 PF03358 NADPH-dependent FMN reductase JKJ11_22980 PF01641 SelR domain JKJ11_22980 PF01625 Peptide methionine sulfoxide reductase JKJ11_22985 PF12793 Sugar transport-related sRNA regulator N-term JKJ11_22985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JKJ11_22995 PF12464 Maltose acetyltransferase JKJ11_22995 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_23000 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_23000 PF14602 Hexapeptide repeat of succinyl-transferase JKJ11_23000 PF12464 Maltose acetyltransferase JKJ11_23005 PF00156 Phosphoribosyl transferase domain JKJ11_23010 PF05368 NmrA-like family JKJ11_23015 PF03466 LysR substrate binding domain JKJ11_23015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_23025 PF03239 Iron permease FTR1 family JKJ11_23030 PF10634 Fe2+ transport protein JKJ11_23050 PF00005 ABC transporter JKJ11_23050 PF02687 FtsX-like permease family JKJ11_23050 PF12704 MacB-like periplasmic core domain JKJ11_23055 PF00578 AhpC/TSA family JKJ11_23065 PF04205 FMN-binding domain JKJ11_23080 PF07690 Major Facilitator Superfamily JKJ11_23085 PF00294 pfkB family carbohydrate kinase JKJ11_23090 PF01791 DeoC/LacD family aldolase JKJ11_23095 PF00455 DeoR C terminal sensor domain JKJ11_23095 PF08220 DeoR-like helix-turn-helix domain JKJ11_23100 PF03280 Proteobacterial lipase chaperone protein JKJ11_23105 PF00561 alpha/beta hydrolase fold JKJ11_23110 PF03372 Endonuclease/Exonuclease/phosphatase family JKJ11_23120 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_23120 PF13192 Thioredoxin domain JKJ11_23125 PF10417 C-terminal domain of 1-Cys peroxiredoxin JKJ11_23125 PF00578 AhpC/TSA family JKJ11_23140 PF03466 LysR substrate binding domain JKJ11_23140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_23145 PF01810 LysE type translocator JKJ11_23160 PF00578 AhpC/TSA family JKJ11_23160 PF10417 C-terminal domain of 1-Cys peroxiredoxin JKJ11_23165 PF00117 Glutamine amidotransferase class-I JKJ11_23165 PF13302 Acetyltransferase (GNAT) domain JKJ11_23165 PF13673 Acetyltransferase (GNAT) domain JKJ11_23165 PF00958 GMP synthase C terminal domain JKJ11_23165 PF03352 Methyladenine glycosylase JKJ11_23170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_23170 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_23170 PF07689 KaiB domain JKJ11_23175 PF00072 Response regulator receiver domain JKJ11_23175 PF00486 Transcriptional regulatory protein, C terminal JKJ11_23185 PF00174 Oxidoreductase molybdopterin binding domain JKJ11_23190 PF01794 Ferric reductase like transmembrane component JKJ11_23195 PF03729 Short repeat of unknown function (DUF308) JKJ11_23200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_23200 PF03466 LysR substrate binding domain JKJ11_23220 PF12706 Beta-lactamase superfamily domain JKJ11_23230 PF07969 Amidohydrolase family JKJ11_23235 PF00005 ABC transporter JKJ11_23240 PF00005 ABC transporter JKJ11_23245 PF06007 Phosphonate metabolism protein PhnJ JKJ11_23250 PF05861 Bacterial phosphonate metabolism protein (PhnI) JKJ11_23255 PF05845 Bacterial phosphonate metabolism protein (PhnH) JKJ11_23260 PF06754 Phosphonate metabolism protein PhnG JKJ11_23265 PF00392 Bacterial regulatory proteins, gntR family JKJ11_23265 PF07702 UTRA domain JKJ11_23285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_23285 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_23285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_23285 PF00672 HAMP domain JKJ11_23285 PF00072 Response regulator receiver domain JKJ11_23285 PF01627 Hpt domain JKJ11_23290 PF04286 Protein of unknown function (DUF445) JKJ11_23295 PF02743 Cache domain JKJ11_23295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JKJ11_23295 PF00672 HAMP domain JKJ11_23310 PF03466 LysR substrate binding domain JKJ11_23310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_23315 PF14863 Alkyl sulfatase dimerisation JKJ11_23315 PF14864 Alkyl sulfatase C-terminal JKJ11_23315 PF00753 Metallo-beta-lactamase superfamily JKJ11_23320 PF00012 Hsp70 protein JKJ11_23325 PF00583 Acetyltransferase (GNAT) family JKJ11_23335 PF01261 Xylose isomerase-like TIM barrel JKJ11_23340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JKJ11_23350 PF00596 Class II Aldolase and Adducin N-terminal domain JKJ11_23355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_23360 PF03611 PTS system sugar-specific permease component JKJ11_23365 PF00455 DeoR C terminal sensor domain JKJ11_23365 PF08220 DeoR-like helix-turn-helix domain JKJ11_23395 PF00109 Beta-ketoacyl synthase, N-terminal domain JKJ11_23395 PF00698 Acyl transferase domain JKJ11_23395 PF00550 Phosphopantetheine attachment site JKJ11_23395 PF16197 Ketoacyl-synthetase C-terminal extension JKJ11_23395 PF09277 Erythronolide synthase, docking JKJ11_23395 PF08659 KR domain JKJ11_23395 PF02801 Beta-ketoacyl synthase, C-terminal domain JKJ11_23395 PF14765 Polyketide synthase dehydratase JKJ11_23395 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_23395 PF08990 Erythronolide synthase docking JKJ11_23400 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_23400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JKJ11_23415 PF00376 MerR family regulatory protein JKJ11_23415 PF09278 MerR, DNA binding JKJ11_23425 PF13718 GNAT acetyltransferase 2 JKJ11_23425 PF05127 Helicase JKJ11_23435 PF18607 ParA helix turn helix domain JKJ11_23435 PF13614 AAA domain JKJ11_23455 PF01709 Transcriptional regulator JKJ11_23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_23465 PF03466 LysR substrate binding domain JKJ11_23470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JKJ11_23470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JKJ11_23485 PF03616 Sodium/glutamate symporter JKJ11_23495 PF03412 Peptidase C39 family JKJ11_23495 PF00664 ABC transporter transmembrane region JKJ11_23495 PF00005 ABC transporter JKJ11_23510 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_23515 PF01243 Pyridoxamine 5'-phosphate oxidase JKJ11_23515 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JKJ11_23520 PF12833 Helix-turn-helix domain JKJ11_23525 PF00392 Bacterial regulatory proteins, gntR family JKJ11_23525 PF07702 UTRA domain JKJ11_23530 PF01547 Bacterial extracellular solute-binding protein JKJ11_23550 PF00005 ABC transporter JKJ11_23550 PF08402 TOBE domain JKJ11_23565 PF01699 Sodium/calcium exchanger protein JKJ11_23570 PF07549 SecD/SecF GG Motif JKJ11_23570 PF02355 Protein export membrane protein JKJ11_23575 PF07549 SecD/SecF GG Motif JKJ11_23575 PF13721 SecD export protein N-terminal TM region JKJ11_23575 PF02355 Protein export membrane protein JKJ11_23590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JKJ11_23595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_23600 PF02378 Phosphotransferase system, EIIC JKJ11_23605 PF00232 Glycosyl hydrolase family 1 JKJ11_23610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JKJ11_23610 PF00356 Bacterial regulatory proteins, lacI family JKJ11_23615 PF00920 Dehydratase family JKJ11_23620 PF01202 Shikimate kinase JKJ11_23625 PF00232 Glycosyl hydrolase family 1 JKJ11_23630 PF14850 DNA-binding domain of Proline dehydrogenase JKJ11_23630 PF01619 Proline dehydrogenase JKJ11_23630 PF00171 Aldehyde dehydrogenase family JKJ11_23630 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JKJ11_23640 PF00474 Sodium:solute symporter family JKJ11_23645 PF14864 Alkyl sulfatase C-terminal JKJ11_23645 PF14863 Alkyl sulfatase dimerisation JKJ11_23645 PF00753 Metallo-beta-lactamase superfamily JKJ11_23650 PF08173 Membrane bound YbgT-like protein JKJ11_23655 PF02322 Cytochrome bd terminal oxidase subunit II JKJ11_23660 PF01654 Cytochrome bd terminal oxidase subunit I JKJ11_23675 PF05114 Protein of unknown function (DUF692) JKJ11_23690 PF02653 Branched-chain amino acid transport system / permease component JKJ11_23695 PF00005 ABC transporter JKJ11_23700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JKJ11_23700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JKJ11_23705 PF08240 Alcohol dehydrogenase GroES-like domain JKJ11_23705 PF00107 Zinc-binding dehydrogenase JKJ11_23710 PF01116 Fructose-bisphosphate aldolase class-II JKJ11_23715 PF05025 RbsD / FucU transport protein family JKJ11_23720 PF00248 Aldo/keto reductase family JKJ11_23725 PF08220 DeoR-like helix-turn-helix domain JKJ11_23725 PF00455 DeoR C terminal sensor domain JKJ11_23730 PF08013 Tagatose 6 phosphate kinase JKJ11_23745 PF13533 Biotin-lipoyl like JKJ11_23750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_23755 PF00873 AcrB/AcrD/AcrF family JKJ11_23765 PF01037 Lrp/AsnC ligand binding domain JKJ11_23775 PF00375 Sodium:dicarboxylate symporter family JKJ11_23785 PF03193 RsgA GTPase JKJ11_23825 PF02321 Outer membrane efflux protein JKJ11_23830 PF04545 Sigma-70, region 4 JKJ11_23830 PF04542 Sigma-70 region 2 JKJ11_23830 PF00140 Sigma-70 factor, region 1.2 JKJ11_23845 PF00486 Transcriptional regulatory protein, C terminal JKJ11_23845 PF18500 CadC C-terminal domain 1 JKJ11_23850 PF00155 Aminotransferase class I and II JKJ11_23860 PF13533 Biotin-lipoyl like JKJ11_23865 PF00873 AcrB/AcrD/AcrF family JKJ11_23890 PF02253 Phospholipase A1 JKJ11_23895 PF00486 Transcriptional regulatory protein, C terminal JKJ11_23895 PF18500 CadC C-terminal domain 1 JKJ11_23905 PF04542 Sigma-70 region 2 JKJ11_23905 PF00140 Sigma-70 factor, region 1.2 JKJ11_23905 PF04545 Sigma-70, region 4 JKJ11_23920 PF02080 TrkA-C domain JKJ11_23920 PF06826 Predicted Permease Membrane Region JKJ11_23925 PF00282 Pyridoxal-dependent decarboxylase conserved domain JKJ11_23930 PF13533 Biotin-lipoyl like JKJ11_23970 PF02630 SCO1/SenC JKJ11_23985 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_23985 PF12804 MobA-like NTP transferase domain JKJ11_23985 PF03479 Plants and Prokaryotes Conserved (PCC) domain JKJ11_23995 PF02798 Glutathione S-transferase, N-terminal domain JKJ11_23995 PF14497 Glutathione S-transferase, C-terminal domain JKJ11_24005 PF04209 homogentisate 1,2-dioxygenase JKJ11_24010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JKJ11_24015 PF03605 Anaerobic c4-dicarboxylate membrane transporter JKJ11_24050 PF04984 Phage tail sheath protein subtilisin-like domain JKJ11_24050 PF17482 Phage tail sheath C-terminal domain JKJ11_24050 PF04984 Phage tail sheath protein subtilisin-like domain JKJ11_24050 PF17482 Phage tail sheath C-terminal domain JKJ11_24055 PF10948 Protein of unknown function (DUF2635) JKJ11_24100 PF00959 Phage lysozyme JKJ11_24145 PF07157 DNA circularisation protein N-terminus JKJ11_24165 PF05840 Bacteriophage replication gene A protein (GPA) JKJ11_24185 PF06892 Phage regulatory protein CII (CP76) JKJ11_24210 PF02899 Phage integrase, N-terminal SAM-like domain JKJ11_24210 PF00589 Phage integrase family JKJ11_24215 PF00664 ABC transporter transmembrane region JKJ11_24215 PF00005 ABC transporter JKJ11_24225 PF09905 DNA-binding protein VF530 JKJ11_24245 PF02028 BCCT, betaine/carnitine/choline family transporter JKJ11_24270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24270 PF03466 LysR substrate binding domain JKJ11_24300 PF00072 Response regulator receiver domain JKJ11_24300 PF00158 Sigma-54 interaction domain JKJ11_24300 PF02954 Bacterial regulatory protein, Fis family JKJ11_24305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_24305 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_24315 PF00119 ATP synthase A chain JKJ11_24320 PF00137 ATP synthase subunit C JKJ11_24330 PF00213 ATP synthase delta (OSCP) subunit JKJ11_24335 PF00306 ATP synthase alpha/beta chain, C terminal domain JKJ11_24335 PF02874 ATP synthase alpha/beta family, beta-barrel domain JKJ11_24335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_24340 PF00231 ATP synthase JKJ11_24345 PF02874 ATP synthase alpha/beta family, beta-barrel domain JKJ11_24345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JKJ11_24350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JKJ11_24350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JKJ11_24360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24360 PF03466 LysR substrate binding domain JKJ11_24380 PF02798 Glutathione S-transferase, N-terminal domain JKJ11_24380 PF14497 Glutathione S-transferase, C-terminal domain JKJ11_24390 PF00210 Ferritin-like domain JKJ11_24420 PF13520 Amino acid permease JKJ11_24425 PF04074 YhcH/YjgK/YiaL JKJ11_24430 PF02929 Beta galactosidase small chain JKJ11_24430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JKJ11_24430 PF00703 Glycosyl hydrolases family 2 JKJ11_24430 PF16353 Domain of unknown function(DUF4981) JKJ11_24430 PF02837 Glycosyl hydrolases family 2, sugar binding domain JKJ11_24435 PF00356 Bacterial regulatory proteins, lacI family JKJ11_24445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24445 PF03466 LysR substrate binding domain JKJ11_24465 PF03600 Citrate transporter JKJ11_24480 PF02581 Thiamine monophosphate synthase JKJ11_24485 PF02110 Hydroxyethylthiazole kinase family JKJ11_24505 PF00939 Sodium:sulfate symporter transmembrane region JKJ11_24510 PF13472 GDSL-like Lipase/Acylhydrolase family JKJ11_24515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JKJ11_24530 PF03466 LysR substrate binding domain JKJ11_24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JKJ11_24540 PF00128 Alpha amylase, catalytic domain JKJ11_24565 PF03466 LysR substrate binding domain JKJ11_24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24575 PF00005 ABC transporter JKJ11_24585 PF01551 Peptidase family M23 JKJ11_24585 PF04225 Opacity-associated protein A LysM-like domain JKJ11_24595 PF12800 4Fe-4S binding domain JKJ11_24595 PF12838 4Fe-4S dicluster domain JKJ11_24600 PF12801 4Fe-4S binding domain JKJ11_24600 PF12837 4Fe-4S binding domain JKJ11_24630 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_24635 PF01042 Endoribonuclease L-PSP JKJ11_24640 PF01321 Creatinase/Prolidase N-terminal domain JKJ11_24640 PF00557 Metallopeptidase family M24 JKJ11_24660 PF13309 HTH domain JKJ11_24660 PF08348 YheO-like PAS domain JKJ11_24665 PF00557 Metallopeptidase family M24 JKJ11_24665 PF01321 Creatinase/Prolidase N-terminal domain JKJ11_24675 PF07687 Peptidase dimerisation domain JKJ11_24675 PF01546 Peptidase family M20/M25/M40 JKJ11_24680 PF01053 Cys/Met metabolism PLP-dependent enzyme JKJ11_24685 PF01037 Lrp/AsnC ligand binding domain JKJ11_24690 PF00672 HAMP domain JKJ11_24690 PF01627 Hpt domain JKJ11_24690 PF00072 Response regulator receiver domain JKJ11_24690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JKJ11_24690 PF00512 His Kinase A (phospho-acceptor) domain JKJ11_24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JKJ11_24695 PF00072 Response regulator receiver domain JKJ11_24700 PF00202 Aminotransferase class-III JKJ11_24710 PF16868 NMT1-like family JKJ11_24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24715 PF03466 LysR substrate binding domain JKJ11_24720 PF00571 CBS domain JKJ11_24720 PF01380 SIS domain JKJ11_24725 PF03608 PTS system enzyme II sorbitol-specific factor JKJ11_24730 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JKJ11_24730 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JKJ11_24735 PF03829 PTS system glucitol/sorbitol-specific IIA component JKJ11_24740 PF00106 short chain dehydrogenase JKJ11_24750 PF08220 DeoR-like helix-turn-helix domain JKJ11_24750 PF00455 DeoR C terminal sensor domain JKJ11_24755 PF03608 PTS system enzyme II sorbitol-specific factor JKJ11_24760 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JKJ11_24760 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JKJ11_24765 PF03829 PTS system glucitol/sorbitol-specific IIA component JKJ11_24780 PF03605 Anaerobic c4-dicarboxylate membrane transporter JKJ11_24785 PF07646 Kelch motif JKJ11_24790 PF01344 Kelch motif JKJ11_24795 PF01418 Helix-turn-helix domain, rpiR family JKJ11_24795 PF01380 SIS domain JKJ11_24800 PF00701 Dihydrodipicolinate synthetase family JKJ11_24805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JKJ11_24810 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JKJ11_24815 PF03480 Bacterial extracellular solute-binding protein, family 7 JKJ11_24820 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JKJ11_24825 PF00480 ROK family JKJ11_24830 PF01979 Amidohydrolase family JKJ11_24840 PF03466 LysR substrate binding domain JKJ11_24840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24845 PF12706 Beta-lactamase superfamily domain JKJ11_24870 PF00873 AcrB/AcrD/AcrF family JKJ11_24875 PF00144 Beta-lactamase JKJ11_24920 PF00873 AcrB/AcrD/AcrF family JKJ11_24925 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_24925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_24930 PF07715 TonB-dependent Receptor Plug Domain JKJ11_24930 PF00593 TonB dependent receptor JKJ11_24935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24935 PF03466 LysR substrate binding domain JKJ11_24940 PF13533 Biotin-lipoyl like JKJ11_24945 PF07690 Major Facilitator Superfamily JKJ11_24950 PF00440 Bacterial regulatory proteins, tetR family JKJ11_24955 PF00582 Universal stress protein family JKJ11_24960 PF00881 Nitroreductase family JKJ11_24970 PF02798 Glutathione S-transferase, N-terminal domain JKJ11_24975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_24975 PF03466 LysR substrate binding domain JKJ11_25015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_25015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_25020 PF07702 UTRA domain JKJ11_25020 PF00392 Bacterial regulatory proteins, gntR family JKJ11_25025 PF02901 Pyruvate formate lyase-like JKJ11_25025 PF01228 Glycine radical JKJ11_25030 PF04055 Radical SAM superfamily JKJ11_25040 PF00483 Nucleotidyl transferase JKJ11_25045 PF00675 Insulinase (Peptidase family M16) JKJ11_25045 PF05193 Peptidase M16 inactive domain JKJ11_25050 PF00011 Hsp20/alpha crystallin family JKJ11_25055 PF00012 Hsp70 protein JKJ11_25060 PF00226 DnaJ domain JKJ11_25060 PF01556 DnaJ C terminal domain JKJ11_25060 PF00684 DnaJ central domain JKJ11_25065 PF00255 Glutathione peroxidase JKJ11_25070 PF03616 Sodium/glutamate symporter JKJ11_25075 PF00924 Mechanosensitive ion channel JKJ11_25080 PF08543 Phosphomethylpyrimidine kinase JKJ11_25085 PF01568 Molydopterin dinucleotide binding domain JKJ11_25085 PF18364 Molybdopterin oxidoreductase N-terminal domain JKJ11_25085 PF00384 Molybdopterin oxidoreductase JKJ11_25090 PF03264 NapC/NirT cytochrome c family, N-terminal region JKJ11_25095 PF00529 HlyD membrane-fusion protein of T1SS JKJ11_25095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JKJ11_25100 PF11742 Protein of unknown function (DUF3302) JKJ11_25115 PF01048 Phosphorylase superfamily JKJ11_25120 PF08349 Protein of unknown function (DUF1722) JKJ11_25125 PF13411 MerR HTH family regulatory protein JKJ11_25130 PF03441 FAD binding domain of DNA photolyase JKJ11_25130 PF00875 DNA photolyase JKJ11_25135 PF01476 LysM domain JKJ11_25135 PF03734 L,D-transpeptidase catalytic domain JKJ11_25135 PF17969 L,D-transpeptidase C-terminal domain JKJ11_25145 PF00270 DEAD/DEAH box helicase JKJ11_25145 PF00271 Helicase conserved C-terminal domain JKJ11_25150 PF12849 PBP superfamily domain JKJ11_25155 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_25160 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_25165 PF00005 ABC transporter JKJ11_25175 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_25180 PF00034 Cytochrome c JKJ11_25185 PF00115 Cytochrome C and Quinol oxidase polypeptide I JKJ11_25195 PF00034 Cytochrome c JKJ11_25195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JKJ11_25200 PF00563 EAL domain JKJ11_25200 PF03707 Bacterial signalling protein N terminal repeat JKJ11_25200 PF00990 Diguanylate cyclase, GGDEF domain JKJ11_25205 PF00854 POT family JKJ11_25210 PF01590 GAF domain JKJ11_25210 PF00158 Sigma-54 interaction domain JKJ11_25225 PF00258 Flavodoxin JKJ11_25225 PF00753 Metallo-beta-lactamase superfamily JKJ11_25225 PF00301 Rubredoxin JKJ11_25230 PF18113 Rubredoxin binding C-terminal domain JKJ11_25230 PF07992 Pyridine nucleotide-disulphide oxidoreductase JKJ11_25235 PF00873 AcrB/AcrD/AcrF family JKJ11_25250 PF03466 LysR substrate binding domain JKJ11_25250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25295 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_25315 PF00106 short chain dehydrogenase JKJ11_25325 PF01074 Glycosyl hydrolases family 38 N-terminal domain JKJ11_25325 PF07748 Glycosyl hydrolases family 38 C-terminal domain JKJ11_25325 PF09261 Alpha mannosidase middle domain JKJ11_25330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_25330 PF02378 Phosphotransferase system, EIIC JKJ11_25330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_25335 PF07702 UTRA domain JKJ11_25335 PF00392 Bacterial regulatory proteins, gntR family JKJ11_25340 PF13419 Haloacid dehalogenase-like hydrolase JKJ11_25345 PF00202 Aminotransferase class-III JKJ11_25350 PF00266 Aminotransferase class-V JKJ11_25360 PF00005 ABC transporter JKJ11_25365 PF00528 Binding-protein-dependent transport system inner membrane component JKJ11_25370 PF07702 UTRA domain JKJ11_25370 PF00392 Bacterial regulatory proteins, gntR family JKJ11_25400 PF07690 Major Facilitator Superfamily JKJ11_25430 PF06628 Catalase-related immune-responsive JKJ11_25430 PF00199 Catalase JKJ11_25445 PF11975 Family 4 glycosyl hydrolase C-terminal domain JKJ11_25445 PF02056 Family 4 glycosyl hydrolase JKJ11_25450 PF12833 Helix-turn-helix domain JKJ11_25460 PF02600 Disulfide bond formation protein DsbB JKJ11_25465 PF01979 Amidohydrolase family JKJ11_25470 PF02424 ApbE family JKJ11_25475 PF00890 FAD binding domain JKJ11_25475 PF04205 FMN-binding domain JKJ11_25475 PF03358 NADPH-dependent FMN reductase JKJ11_25485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JKJ11_25495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JKJ11_25495 PF00005 ABC transporter JKJ11_25500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JKJ11_25500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JKJ11_25500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JKJ11_25500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JKJ11_25505 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JKJ11_25510 PF03824 High-affinity nickel-transport protein JKJ11_25520 PF07683 Cobalamin synthesis protein cobW C-terminal domain JKJ11_25520 PF02492 CobW/HypB/UreG, nucleotide-binding domain JKJ11_25525 PF00132 Bacterial transferase hexapeptide (six repeats) JKJ11_25525 PF00101 Ribulose bisphosphate carboxylase, small chain JKJ11_25530 PF01979 Amidohydrolase family JKJ11_25545 PF00950 ABC 3 transport family JKJ11_25550 PF00005 ABC transporter JKJ11_25555 PF01297 Zinc-uptake complex component A periplasmic JKJ11_25560 PF00583 Acetyltransferase (GNAT) family JKJ11_25570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25570 PF03466 LysR substrate binding domain JKJ11_25575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JKJ11_25580 PF03611 PTS system sugar-specific permease component JKJ11_25585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JKJ11_25610 PF01510 N-acetylmuramoyl-L-alanine amidase JKJ11_25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25625 PF03466 LysR substrate binding domain JKJ11_25630 PF00455 DeoR C terminal sensor domain JKJ11_25630 PF08220 DeoR-like helix-turn-helix domain JKJ11_25635 PF01228 Glycine radical JKJ11_25635 PF02901 Pyruvate formate lyase-like JKJ11_25640 PF04055 Radical SAM superfamily JKJ11_25645 PF00923 Transaldolase/Fructose-6-phosphate aldolase JKJ11_25650 PF02416 mttA/Hcf106 family JKJ11_25660 PF03466 LysR substrate binding domain JKJ11_25660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25670 PF02909 Tetracyclin repressor-like, C-terminal domain JKJ11_25670 PF00440 Bacterial regulatory proteins, tetR family JKJ11_25675 PF01266 FAD dependent oxidoreductase JKJ11_25690 PF00155 Aminotransferase class I and II JKJ11_25695 PF00491 Arginase family JKJ11_25705 PF13091 PLD-like domain JKJ11_25710 PF00892 EamA-like transporter family JKJ11_25720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25740 PF02469 Fasciclin domain JKJ11_25775 PF13654 AAA domain JKJ11_25775 PF05362 Lon protease (S16) C-terminal proteolytic domain JKJ11_25780 PF07238 PilZ domain JKJ11_25780 PF12945 Flagellar protein YcgR JKJ11_25785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JKJ11_25785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JKJ11_25795 PF06560 Glucose-6-phosphate isomerase (GPI) JKJ11_25805 PF03613 PTS system mannose/fructose/sorbose family IID component JKJ11_25810 PF03609 PTS system sorbose-specific iic component JKJ11_25815 PF03830 PTS system sorbose subfamily IIB component JKJ11_25815 PF03610 PTS system fructose IIA component JKJ11_25830 PF00356 Bacterial regulatory proteins, lacI family JKJ11_25835 PF01965 DJ-1/PfpI family JKJ11_25850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JKJ11_25850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JKJ11_25865 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JKJ11_25875 PF00491 Arginase family JKJ11_25880 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JKJ11_25880 PF17944 Arginine decarboxylase C-terminal helical extension JKJ11_25880 PF17810 Arginine decarboxylase helical bundle domain JKJ11_25885 PF01590 GAF domain JKJ11_25885 PF02954 Bacterial regulatory protein, Fis family JKJ11_25885 PF00158 Sigma-54 interaction domain JKJ11_25890 PF00171 Aldehyde dehydrogenase family JKJ11_25895 PF02522 Aminoglycoside 3-N-acetyltransferase JKJ11_25910 PF00313 'Cold-shock' DNA-binding domain JKJ11_25915 PF07969 Amidohydrolase family JKJ11_25920 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JKJ11_25925 PF00588 SpoU rRNA Methylase family JKJ11_25925 PF08032 RNA 2'-O ribose methyltransferase substrate binding JKJ11_25930 PF11953 Domain of unknown function (DUF3470) JKJ11_25930 PF00037 4Fe-4S binding domain JKJ11_25940 PF18416 N-acetylglucosamine binding protein domain 2 JKJ11_25940 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JKJ11_25945 PF00291 Pyridoxal-phosphate dependent enzyme JKJ11_25950 PF00221 Aromatic amino acid lyase JKJ11_25955 PF17391 Urocanase N-terminal domain JKJ11_25955 PF17392 Urocanase C-terminal domain JKJ11_25955 PF01175 Urocanase Rossmann-like domain JKJ11_25960 PF00491 Arginase family JKJ11_25965 PF01979 Amidohydrolase family JKJ11_25975 PF00392 Bacterial regulatory proteins, gntR family JKJ11_25975 PF07702 UTRA domain JKJ11_25980 PF01557 Fumarylacetoacetate (FAA) hydrolase family JKJ11_25990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JKJ11_25990 PF03466 LysR substrate binding domain