locus-tag	class	description
JKJ11_00010	COG0592	DNA-directed DNA polymerase activity
JKJ11_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JKJ11_00020	COG0187	DNA topoisomerase II activity
JKJ11_00025	COG0071	Belongs to the small heat shock protein (HSP20) family
JKJ11_00030	COG3977	Valine--pyruvate aminotransferase
JKJ11_00040	COG0752	glycyl-tRNA synthetase alpha subunit
JKJ11_00045	COG2119	membrane
JKJ11_00065	COG0583	DNA-binding transcription factor activity
JKJ11_00070	COG2863	cytochrome
JKJ11_00075	COG3258	Cytochrome c
JKJ11_00080	COG0604	alcohol dehydrogenase
JKJ11_00085	COG0183	Belongs to the thiolase family
JKJ11_00095	COG1739	Uncharacterized protein family UPF0029
JKJ11_00100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JKJ11_00150	COG0583	DNA-binding transcription factor activity
JKJ11_00155	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JKJ11_00160	COG2960	long-chain fatty acid transporting porin activity
JKJ11_00165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_00170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_00180	COG0210	DNA helicase
JKJ11_00240	COG2235	arginine
JKJ11_00255	COG0747	negative chemotaxis
JKJ11_00260	COG0601	transmembrane transport
JKJ11_00265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JKJ11_00285	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JKJ11_00295	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JKJ11_00300	COG0339	signal peptide processing
JKJ11_00305	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JKJ11_00310	COG1522	sequence-specific DNA binding
JKJ11_00315	COG0742	ribosomal rna small subunit methyltransferase
JKJ11_00325	COG0697	spore germination
JKJ11_00330	COG0589	response to stress
JKJ11_00335	COG1528	Iron-storage protein
JKJ11_00345	COG2081	HI0933 family
JKJ11_00350	COG3681	Belongs to the UPF0597 family
JKJ11_00355	COG0814	amino acid
JKJ11_00370	COG0741	lytic transglycosylase activity
JKJ11_00370	COG1388	LysM domain
JKJ11_00390	COG1815	bacterial-type flagellum-dependent cell motility
JKJ11_00395	COG1558	bacterial-type flagellum-dependent cell motility
JKJ11_00400	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JKJ11_00410	COG4787	bacterial-type flagellum-dependent cell motility
JKJ11_00415	COG4786	Flagellar basal body rod
JKJ11_00420	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JKJ11_00425	COG1706	bacterial-type flagellum-dependent cell motility
JKJ11_00435	COG4786	Flagellar basal body rod
JKJ11_00435	COG1256	bacterial-type flagellum assembly
JKJ11_00440	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_00455	COG1360	Flagellar Motor Protein
JKJ11_00460	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JKJ11_00465	COG1191	sigma factor activity
JKJ11_00470	COG1580	Controls the rotational direction of flagella during chemotaxis
JKJ11_00485	COG1516	flagellar protein fliS
JKJ11_00490	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JKJ11_00495	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_00520	COG1987	bacterial-type flagellum assembly
JKJ11_00550	COG1677	Flagellar hook-basal body complex protein FliE
JKJ11_00580	COG1322	Protein conserved in bacteria
JKJ11_00585	COG2226	methyltransferase
JKJ11_00605	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JKJ11_00610	COG0805	protein transport
JKJ11_00615	COG0084	hydrolase, TatD family'
JKJ11_00630	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JKJ11_00630	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JKJ11_00635	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JKJ11_00650	COG0534	Mate efflux family protein
JKJ11_00655	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JKJ11_00670	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JKJ11_00675	COG4206	TonB-dependent receptor
JKJ11_00685	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JKJ11_00785	COG1295	ribonuclease BN
JKJ11_00790	COG1490	D-aminoacyl-tRNA deacylase activity
JKJ11_00795	COG0456	acetyltransferase
JKJ11_00810	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JKJ11_00815	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JKJ11_00820	COG3031	protein transport across the cell outer membrane
JKJ11_00830	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JKJ11_00835	COG1459	type II secretion system
JKJ11_00840	COG2165	general secretion pathway protein
JKJ11_00845	COG2165	general secretion pathway protein
JKJ11_00850	COG2165	general secretion pathway protein
JKJ11_00855	COG4795	General secretion pathway protein
JKJ11_00860	COG3156	type II secretion system protein K
JKJ11_00865	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
JKJ11_00870	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
JKJ11_00880	COG1218	3'(2'),5'-bisphosphate nucleotidase
JKJ11_00885	COG0494	nUDIX hydrolase
JKJ11_00910	COG2183	response to ionizing radiation
JKJ11_00915	COG4067	protein conserved in archaea
JKJ11_00915	COG0189	ligase activity
JKJ11_00920	COG1253	flavin adenine dinucleotide binding
JKJ11_00935	COG0151	Belongs to the GarS family
JKJ11_00940	COG0138	bifunctional purine biosynthesis protein purh
JKJ11_00945	COG0789	Transcriptional regulator
JKJ11_00950	COG3710	Transcriptional regulator
JKJ11_00955	COG0531	amino acid
JKJ11_00960	COG1982	Orn Lys Arg decarboxylase major
JKJ11_00965	COG0840	transmembrane signaling receptor activity
JKJ11_01025	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
JKJ11_01040	COG0439	Biotin carboxylase
JKJ11_01045	COG0511	ligase activity, forming carbon-carbon bonds
JKJ11_01050	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JKJ11_01055	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JKJ11_01070	COG2814	Major facilitator Superfamily
JKJ11_01075	COG0784	Response regulator, receiver
JKJ11_01075	COG2198	Histidine kinase
JKJ11_01075	COG2205	protein histidine kinase activity
JKJ11_01090	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ11_01105	COG4232	protein-disulfide reductase activity
JKJ11_01110	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JKJ11_01115	COG1027	Aspartate ammonia-lyase
JKJ11_01130	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JKJ11_01135	COG1560	Kdo2-lipid A biosynthetic process
JKJ11_01140	COG1560	Kdo2-lipid A biosynthetic process
JKJ11_01145	COG1309	transcriptional regulator
JKJ11_01150	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JKJ11_01155	COG2003	Belongs to the UPF0758 family
JKJ11_01160	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JKJ11_01165	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JKJ11_01170	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JKJ11_01175	COG2866	Carboxypeptidase
JKJ11_01180	COG2205	protein histidine kinase activity
JKJ11_01185	COG0745	RESPONSE REGULATOR receiver
JKJ11_01190	COG3678	ATP-independent chaperone mediated protein folding
JKJ11_01195	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JKJ11_01205	COG0149	triose-phosphate isomerase activity
JKJ11_01230	COG1494	fructose-1,6-bisphosphatase
JKJ11_01235	COG3074	FtsZ-dependent cytokinesis
JKJ11_01250	COG4942	peptidase
JKJ11_01260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ11_01265	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JKJ11_01270	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JKJ11_01275	COG1045	serine acetyltransferase
JKJ11_01280	COG0534	Mate efflux family protein
JKJ11_01290	COG0459	protein refolding
JKJ11_01305	COG1509	lysine 2,3-aminomutase activity
JKJ11_01310	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JKJ11_01330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JKJ11_01335	COG1053	succinate dehydrogenase
JKJ11_01340	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
JKJ11_01350	COG0490	domain, Protein
JKJ11_01350	COG0471	metal ion transport
JKJ11_01355	COG0688	phosphatidylethanolamine metabolic process
JKJ11_01360	COG1162	GTPase activity
JKJ11_01365	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
JKJ11_01420	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JKJ11_01425	COG0802	atpase or kinase
JKJ11_01435	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JKJ11_01440	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JKJ11_01450	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JKJ11_01455	COG0330	HflC and HflK could
JKJ11_01460	COG0330	HflC and HflK could
JKJ11_01465	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JKJ11_01470	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JKJ11_01475	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JKJ11_01480	COG0557	exoribonuclease II activity
JKJ11_01485	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JKJ11_01500	COG0545	Peptidyl-prolyl cis-trans isomerase
JKJ11_01505	COG2964	Protein conserved in bacteria
JKJ11_01510	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JKJ11_01515	COG2923	Belongs to the DsrF TusC family
JKJ11_01535	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JKJ11_01560	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JKJ11_01565	COG0088	Forms part of the polypeptide exit tunnel
JKJ11_01575	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JKJ11_01580	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JKJ11_01585	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JKJ11_01590	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JKJ11_01595	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JKJ11_01605	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JKJ11_01615	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JKJ11_01625	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JKJ11_01630	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JKJ11_01635	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JKJ11_01650	COG1841	ribosomal large subunit assembly
JKJ11_01655	COG0200	Binds to the 23S rRNA
JKJ11_01660	COG0201	protein transport
JKJ11_01665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JKJ11_01670	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JKJ11_01675	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JKJ11_01685	COG0202	RNA polymerase activity
JKJ11_01690	COG0203	ribosomal protein L17
JKJ11_01700	COG0545	Peptidyl-prolyl cis-trans isomerase
JKJ11_01710	COG2153	protein acetylation
JKJ11_01720	COG1648	precorrin-2 dehydrogenase activity
JKJ11_01720	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JKJ11_01725	COG0175	sulfate reduction
JKJ11_01730	COG2895	sulfate adenylyltransferase (ATP) activity
JKJ11_01735	COG3273	potassium ion transport
JKJ11_01735	COG0471	metal ion transport
JKJ11_01740	COG0529	Catalyzes the synthesis of activated sulfate
JKJ11_01775	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
JKJ11_01785	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_01790	COG0729	surface antigen
JKJ11_01810	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JKJ11_01815	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
JKJ11_01820	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JKJ11_01825	COG0163	prenyltransferase activity
JKJ11_01830	COG4143	(ABC) transporter
JKJ11_01835	COG1178	ABC-type Fe3 transport system permease component
JKJ11_01840	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
JKJ11_01850	COG0312	modulator of DNA gyrase
JKJ11_01855	COG2239	Acts as a magnesium transporter
JKJ11_01860	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_01865	COG1660	Displays ATPase and GTPase activities
JKJ11_01870	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_01875	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JKJ11_01885	COG1137	ATPase activity
JKJ11_01890	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JKJ11_01900	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JKJ11_01905	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JKJ11_01905	COG0517	IMP dehydrogenase activity
JKJ11_01915	COG1127	ABC transporter
JKJ11_01920	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JKJ11_01925	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JKJ11_01930	COG2854	intermembrane phospholipid transfer
JKJ11_01940	COG5007	Belongs to the BolA IbaG family
JKJ11_01945	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JKJ11_01950	COG0204	Acyl-transferase
JKJ11_01955	COG0251	oxidation-reduction process
JKJ11_01960	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
JKJ11_01990	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JKJ11_01995	COG1546	Belongs to the CinA family
JKJ11_02000	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JKJ11_02015	COG0527	aspartate kinase activity
JKJ11_02065	COG3630	sodium ion export across plasma membrane
JKJ11_02070	COG0511	ligase activity, forming carbon-carbon bonds
JKJ11_02070	COG5016	pyruvate
JKJ11_02075	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
JKJ11_02085	COG1238	metal cluster binding
JKJ11_02090	COG0612	Peptidase, M16
JKJ11_02095	COG2918	glutathione biosynthetic process
JKJ11_02100	COG1854	S-ribosylhomocysteine lyase activity
JKJ11_02110	COG1678	Uncharacterized ACR, COG1678
JKJ11_02115	COG0189	ligase activity
JKJ11_02120	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JKJ11_02125	COG2356	endonuclease I
JKJ11_02140	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JKJ11_02155	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JKJ11_02160	COG0126	phosphoglycerate kinase activity
JKJ11_02165	COG0191	fructose-bisphosphate aldolase activity
JKJ11_02170	COG0668	transmembrane transport
JKJ11_02180	COG1279	arginine transmembrane transporter activity
JKJ11_02185	COG0583	DNA-binding transcription factor activity
JKJ11_02195	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JKJ11_02205	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JKJ11_02215	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JKJ11_02220	COG3079	Belongs to the UPF0149 family
JKJ11_02225	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JKJ11_02230	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JKJ11_02250	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JKJ11_02255	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JKJ11_02260	COG1595	DNA-templated transcription, initiation
JKJ11_02275	COG3086	response to oxidative stress
JKJ11_02280	COG0481	GTPase activity
JKJ11_02290	COG0571	ribonuclease III activity
JKJ11_02295	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JKJ11_02300	COG1381	Involved in DNA repair and RecF pathway recombination
JKJ11_02305	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JKJ11_02310	COG0736	holo-[acyl-carrier-protein] synthase activity
JKJ11_02315	COG3437	response regulator, receiver
JKJ11_02315	COG2205	protein histidine kinase activity
JKJ11_02315	COG4999	Histidine kinase
JKJ11_02315	COG3850	Histidine kinase
JKJ11_02320	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JKJ11_02325	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JKJ11_02330	COG3956	TIGRFAM MazG family protein
JKJ11_02340	COG0148	phosphopyruvate hydratase activity
JKJ11_02360	COG1929	Belongs to the glycerate kinase type-1 family
JKJ11_02365	COG2610	gluconate transmembrane transporter activity
JKJ11_02370	COG3835	regulator
JKJ11_02375	COG3112	Uncharacterised protein family (UPF0231)
JKJ11_02385	COG0004	ammonium transporteR
JKJ11_02390	COG1840	ABC-type Fe3 transport system, periplasmic component
JKJ11_02400	COG3842	ATPase activity
JKJ11_02405	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JKJ11_02420	COG2971	BadF BadG BcrA BcrD
JKJ11_02430	COG4608	Belongs to the ABC transporter superfamily
JKJ11_02435	COG0444	Belongs to the ABC transporter superfamily
JKJ11_02440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JKJ11_02450	COG0747	negative chemotaxis
JKJ11_02470	COG0358	DNA primase activity
JKJ11_02475	COG1610	YqeY-like protein
JKJ11_02480	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JKJ11_02485	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JKJ11_02490	COG2267	carboxylic ester hydrolase activity
JKJ11_02495	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JKJ11_02500	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JKJ11_02505	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JKJ11_02510	COG1968	undecaprenyl-diphosphatase activity
JKJ11_02515	COG0617	tRNA 3'-terminal CCA addition
JKJ11_02520	COG3267	Type II secretory pathway component ExeA
JKJ11_02520	COG3409	Peptidoglycan-binding domain 1 protein
JKJ11_02535	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JKJ11_02550	COG0629	single-stranded DNA binding
JKJ11_02555	COG2199	diguanylate cyclase activity
JKJ11_02555	COG2200	EAL domain
JKJ11_02580	COG3267	Type II secretory pathway component ExeA
JKJ11_02580	COG3409	Peptidoglycan-binding domain 1 protein
JKJ11_02590	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JKJ11_02595	COG1459	type II secretion system
JKJ11_02605	COG2165	general secretion pathway protein
JKJ11_02610	COG2165	general secretion pathway protein
JKJ11_02640	COG1077	Cell shape determining protein MreB Mrl
JKJ11_02645	COG1792	Involved in formation and maintenance of cell shape
JKJ11_02650	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JKJ11_02655	COG0424	maF-like protein
JKJ11_02665	COG3164	Protein of unknown function
JKJ11_02670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JKJ11_02675	COG0312	modulator of DNA gyrase
JKJ11_02680	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JKJ11_02685	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JKJ11_02690	COG0564	pseudouridine synthase activity
JKJ11_02695	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JKJ11_02700	COG0589	response to stress
JKJ11_02710	COG2358	TRAP transporter, solute receptor (TAXI family
JKJ11_02715	COG1438	arginine binding
JKJ11_02720	COG0039	L-malate dehydrogenase activity
JKJ11_02730	COG0142	geranyltranstransferase activity
JKJ11_02735	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JKJ11_02745	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JKJ11_02750	COG1289	transmembrane transporter activity
JKJ11_02755	COG2966	Psort location CytoplasmicMembrane, score
JKJ11_02760	COG3610	response to peptide
JKJ11_02775	COG2967	ApaG domain
JKJ11_02780	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JKJ11_02785	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JKJ11_02790	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JKJ11_02795	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JKJ11_02800	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JKJ11_02815	COG0066	3-isopropylmalate dehydratase activity
JKJ11_02825	COG0473	3-isopropylmalate dehydrogenase activity
JKJ11_02830	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JKJ11_02850	COG0671	phosphoesterase, PA-phosphatase related
JKJ11_02860	COG0583	DNA-binding transcription factor activity
JKJ11_02865	COG1022	Amp-dependent synthetase and ligase
JKJ11_02870	COG0739	heme binding
JKJ11_02875	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JKJ11_02880	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
JKJ11_02890	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JKJ11_02910	COG0848	biopolymer transport protein
JKJ11_02915	COG0811	peptide transport
JKJ11_02920	COG0811	peptide transport
JKJ11_02935	COG4774	siderophore transport
JKJ11_02950	COG1115	amino acid carrier protein
JKJ11_02955	COG3022	response to hydroperoxide
JKJ11_02960	COG0513	Belongs to the DEAD box helicase family
JKJ11_02965	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JKJ11_02980	COG4974	Belongs to the 'phage' integrase family
JKJ11_02985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JKJ11_02990	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JKJ11_03000	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JKJ11_03005	COG2204	response regulator
JKJ11_03015	COG0667	Aldo Keto reductase
JKJ11_03025	COG3066	DNA modification
JKJ11_03030	COG0494	nUDIX hydrolase
JKJ11_03035	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
JKJ11_03040	COG0730	response to heat
JKJ11_03050	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JKJ11_03055	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_03065	COG3065	identical protein binding
JKJ11_03070	COG1283	sodium-dependent phosphate transmembrane transporter activity
JKJ11_03075	COG0583	DNA-binding transcription factor activity
JKJ11_03080	COG0640	Transcriptional regulator
JKJ11_03085	COG0268	Binds directly to 16S ribosomal RNA
JKJ11_03090	COG0728	peptidoglycan biosynthetic process
JKJ11_03095	COG0196	riboflavin kinase activity
JKJ11_03105	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JKJ11_03110	COG1047	Peptidyl-prolyl cis-trans
JKJ11_03115	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JKJ11_03125	COG2027	D-alanyl-D-alanine carboxypeptidase
JKJ11_03130	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JKJ11_03135	COG1534	Rna-binding protein
JKJ11_03145	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JKJ11_03150	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JKJ11_03155	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JKJ11_03160	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JKJ11_03175	COG0779	Required for maturation of 30S ribosomal subunits
JKJ11_03180	COG0195	Participates in both transcription termination and antitermination
JKJ11_03195	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JKJ11_03200	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JKJ11_03220	COG0534	Mate efflux family protein
JKJ11_03225	COG0826	peptidase U32
JKJ11_03230	COG0826	peptidase U32
JKJ11_03240	COG3154	lipid carrier protein
JKJ11_03245	COG3153	acetyltransferase
JKJ11_03265	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_03290	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JKJ11_03295	COG1079	Belongs to the binding-protein-dependent transport system permease family
JKJ11_03300	COG4603	Belongs to the binding-protein-dependent transport system permease family
JKJ11_03305	COG3845	ABC transporter
JKJ11_03310	COG1744	ABC transporter substrate-binding protein PnrA-like
JKJ11_03320	COG0084	hydrolase, TatD family'
JKJ11_03325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JKJ11_03330	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JKJ11_03335	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JKJ11_03345	COG0813	purine-nucleoside phosphorylase activity
JKJ11_03355	COG0560	Phosphoserine phosphatase
JKJ11_03365	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JKJ11_03370	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JKJ11_03375	COG0583	DNA-binding transcription factor activity
JKJ11_03380	COG5457	Domain of unknown function (DUF1127)
JKJ11_03385	COG1022	Amp-dependent synthetase and ligase
JKJ11_03395	COG2059	Chromate
JKJ11_03400	COG0583	DNA-binding transcription factor activity
JKJ11_03420	COG3250	beta-galactosidase activity
JKJ11_03430	COG0534	Mate efflux family protein
JKJ11_03440	COG1129	ABC transporter
JKJ11_03450	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JKJ11_03455	COG1085	galactose-1-phosphate uridylyltransferase
JKJ11_03465	COG2017	converts alpha-aldose to the beta-anomer
JKJ11_03470	COG1609	Transcriptional regulator
JKJ11_03480	COG2211	Major facilitator Superfamily
JKJ11_03490	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_03490	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_03490	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_03495	COG2207	Transcriptional regulator
JKJ11_03505	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_03515	COG0367	asparagine synthase
JKJ11_03520	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JKJ11_03520	COG4651	solute:proton antiporter activity
JKJ11_03525	COG1846	Transcriptional regulator
JKJ11_03525	COG1940	carbohydrate kinase activity
JKJ11_03530	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JKJ11_03535	COG2190	(PTS) system
JKJ11_03535	COG1263	PTS System
JKJ11_03535	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_03540	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JKJ11_03545	COG0735	belongs to the Fur family
JKJ11_03560	COG0716	FMN binding
JKJ11_03570	COG0596	Alpha beta hydrolase
JKJ11_03575	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
JKJ11_03580	COG0033	Phosphoglucomutase
JKJ11_03585	COG0583	DNA-binding transcription factor activity
JKJ11_03595	COG2363	Small membrane protein
JKJ11_03605	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JKJ11_03610	COG1611	Belongs to the LOG family
JKJ11_03635	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
JKJ11_03640	COG1464	Belongs to the NlpA lipoprotein family
JKJ11_03645	COG2011	ABC-type metal ion transport system permease component
JKJ11_03650	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JKJ11_03655	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JKJ11_03670	COG1263	PTS System
JKJ11_03670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_03675	COG0366	Alpha amylase catalytic
JKJ11_03685	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JKJ11_03695	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JKJ11_03705	COG2921	Belongs to the UPF0250 family
JKJ11_03710	COG1686	Belongs to the peptidase S11 family
JKJ11_03715	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JKJ11_03720	COG0772	Belongs to the SEDS family
JKJ11_03725	COG0768	penicillin binding
JKJ11_03730	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JKJ11_03735	COG0799	negative regulation of ribosome biogenesis
JKJ11_03740	COG1466	dna polymerase III delta subunit
JKJ11_03745	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
JKJ11_03750	COG0495	leucyl-tRNA aminoacylation
JKJ11_03755	COG2888	peptidyl-tyrosine sulfation
JKJ11_03760	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
JKJ11_03765	COG3115	cell septum assembly
JKJ11_03785	COG0789	Transcriptional regulator
JKJ11_03820	COG2608	mercury ion transmembrane transporter activity
JKJ11_03820	COG2217	Heavy metal translocating P-type atpase
JKJ11_03830	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JKJ11_03835	COG0142	geranyltranstransferase activity
JKJ11_03840	COG1722	exodeoxyribonuclease VII activity
JKJ11_03845	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JKJ11_03865	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JKJ11_03880	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JKJ11_03885	COG1053	succinate dehydrogenase
JKJ11_03895	COG0567	Dehydrogenase, E1 component
JKJ11_03900	COG0508	dehydrogenase complex catalyzes the overall conversion of
JKJ11_03915	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JKJ11_03920	COG1121	(ABC) transporter
JKJ11_03925	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JKJ11_03930	COG2207	Transcriptional regulator
JKJ11_03940	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JKJ11_03950	COG1918	ferrous iron import across plasma membrane
JKJ11_03975	COG0018	arginyl-trna synthetase
JKJ11_03985	COG3102	Protein conserved in bacteria
JKJ11_03995	COG0788	formyltetrahydrofolate deformylase activity
JKJ11_04005	COG1199	ATP-dependent helicase activity
JKJ11_04010	COG1214	PFAM Peptidase M22, glycoprotease
JKJ11_04030	COG0318	PFAM AMP-dependent synthetase and ligase
JKJ11_04035	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JKJ11_04040	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JKJ11_04045	COG2894	cell division
JKJ11_04050	COG0850	regulation of cytokinetic process
JKJ11_04055	COG3100	YcgL domain-containing protein
JKJ11_04060	COG2951	lytic endotransglycosylase activity
JKJ11_04095	COG0513	Belongs to the DEAD box helicase family
JKJ11_04110	COG0330	HflC and HflK could
JKJ11_04115	COG3118	belongs to the thioredoxin family
JKJ11_04125	COG0300	oxidoreductase activity
JKJ11_04130	COG1090	epimerase
JKJ11_04155	COG0622	Phosphoesterase
JKJ11_04160	COG2190	(PTS) system
JKJ11_04165	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JKJ11_04170	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_04175	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JKJ11_04180	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JKJ11_04185	COG4535	Mg2 and Co2 transporter CorC
JKJ11_04190	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JKJ11_04195	COG1702	phosphate starvation-inducible protein PhoH
JKJ11_04205	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JKJ11_04315	COG0193	aminoacyl-tRNA hydrolase activity
JKJ11_04320	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JKJ11_04330	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
JKJ11_04335	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JKJ11_04340	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JKJ11_04345	COG2890	protein-(glutamine-N5) methyltransferase activity
JKJ11_04350	COG3094	Invasion gene expression up-regulator, SirB
JKJ11_04355	COG2912	Transglutaminase-like superfamily
JKJ11_04360	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JKJ11_04370	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JKJ11_04375	COG1187	pseudouridine synthase activity
JKJ11_04380	COG2840	Smr protein MutS2
JKJ11_04400	COG3383	formate dehydrogenase (NAD+) activity
JKJ11_04425	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JKJ11_04435	COG1815	bacterial-type flagellum-dependent cell motility
JKJ11_04440	COG1558	bacterial-type flagellum-dependent cell motility
JKJ11_04445	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JKJ11_04450	COG1749	Flagellar hook protein flgE
JKJ11_04455	COG4786	Flagellar basal body rod
JKJ11_04460	COG4786	Flagellar basal body rod
JKJ11_04465	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JKJ11_04470	COG1706	bacterial-type flagellum-dependent cell motility
JKJ11_04480	COG4786	Flagellar basal body rod
JKJ11_04480	COG1256	bacterial-type flagellum assembly
JKJ11_04490	COG2885	chlorophyll binding
JKJ11_04505	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JKJ11_04530	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JKJ11_04550	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_04555	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JKJ11_04580	COG1191	sigma factor activity
JKJ11_04585	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JKJ11_04590	COG1360	Flagellar Motor Protein
JKJ11_04600	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JKJ11_04615	COG1653	transport
JKJ11_04620	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_04625	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_04630	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_04640	COG2204	response regulator
JKJ11_04660	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JKJ11_04665	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JKJ11_04670	COG0776	regulation of translation
JKJ11_04675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JKJ11_04695	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JKJ11_04700	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
JKJ11_04705	COG0436	Aminotransferase
JKJ11_04710	COG1169	isochorismate synthase
JKJ11_04715	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JKJ11_04720	COG0596	Alpha beta hydrolase
JKJ11_04725	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JKJ11_04745	COG2855	membrane
JKJ11_04795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_04800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_04810	COG0840	transmembrane signaling receptor activity
JKJ11_04810	COG3290	protein histidine kinase activity
JKJ11_04815	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JKJ11_04820	COG1522	sequence-specific DNA binding
JKJ11_04825	COG1454	alcohol dehydrogenase
JKJ11_04835	COG1946	Acyl-CoA thioesterase
JKJ11_04840	COG3126	Type III secretion system lipoprotein chaperone (YscW)
JKJ11_04860	COG1454	alcohol dehydrogenase
JKJ11_04865	COG0235	Class ii aldolase
JKJ11_04870	COG4806	L-rhamnose isomerase
JKJ11_04875	COG1070	Carbohydrate kinase
JKJ11_04880	COG3254	rhamnose metabolic process
JKJ11_04890	COG4977	sequence-specific DNA binding
JKJ11_04920	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_04930	COG0251	oxidation-reduction process
JKJ11_04935	COG0076	glutamate decarboxylase activity
JKJ11_04940	COG2985	domain, Protein
JKJ11_04950	COG0513	Belongs to the DEAD box helicase family
JKJ11_04990	COG0674	pyruvate-flavodoxin oxidoreductase activity
JKJ11_05000	COG0513	Belongs to the DEAD box helicase family
JKJ11_05010	COG4948	Mandelate Racemase Muconate Lactonizing
JKJ11_05020	COG0583	DNA-binding transcription factor activity
JKJ11_05025	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JKJ11_05035	COG3706	GGDEF domain
JKJ11_05040	COG1609	Transcriptional regulator
JKJ11_05050	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JKJ11_05055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JKJ11_05060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JKJ11_05070	COG0101	tRNA pseudouridine synthase activity
JKJ11_05075	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JKJ11_05080	COG0285	dihydrofolate synthase activity
JKJ11_05085	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JKJ11_05090	COG1286	toxin biosynthetic process
JKJ11_05095	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JKJ11_05100	COG0583	DNA-binding transcription factor activity
JKJ11_05105	COG0745	RESPONSE REGULATOR receiver
JKJ11_05115	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JKJ11_05120	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JKJ11_05130	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JKJ11_05175	COG2856	Zn peptidase
JKJ11_05205	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_05220	COG2226	methyltransferase
JKJ11_05230	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JKJ11_05235	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_05245	COG3139	Protein of unknown function (DUF1315)
JKJ11_05250	COG0659	secondary active sulfate transmembrane transporter activity
JKJ11_05255	COG1530	ribonuclease E activity
JKJ11_05260	COG0564	pseudouridine synthase activity
JKJ11_05265	COG0424	maF-like protein
JKJ11_05270	COG1399	metal-binding, possibly nucleic acid-binding protein
JKJ11_05275	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JKJ11_05285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JKJ11_05310	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JKJ11_05315	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JKJ11_05320	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JKJ11_05325	COG0470	DNA polymerase III
JKJ11_05330	COG0084	hydrolase, TatD family'
JKJ11_05335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_05335	COG1263	PTS System
JKJ11_05350	COG0733	neurotransmitter:sodium symporter activity
JKJ11_05365	COG4667	esterase of the alpha-beta hydrolase superfamily
JKJ11_05370	COG1940	carbohydrate kinase activity
JKJ11_05375	COG0835	chemotaxis
JKJ11_05375	COG0784	Response regulator, receiver
JKJ11_05395	COG4667	esterase of the alpha-beta hydrolase superfamily
JKJ11_05400	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_05405	COG0616	signal peptide processing
JKJ11_05410	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JKJ11_05415	COG0539	negative regulation of cytoplasmic translation
JKJ11_05420	COG0776	regulation of translation
JKJ11_05425	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JKJ11_05430	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JKJ11_05435	COG0284	orotidine-5'-phosphate decarboxylase activity
JKJ11_05450	COG0583	DNA-binding transcription factor activity
JKJ11_05460	COG0686	Belongs to the AlaDH PNT family
JKJ11_05465	COG1522	sequence-specific DNA binding
JKJ11_05470	COG1674	ftsk spoiiie
JKJ11_05480	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JKJ11_05485	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JKJ11_05490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JKJ11_05500	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JKJ11_05515	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JKJ11_05535	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_05550	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JKJ11_05570	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JKJ11_05580	COG0482	sulfurtransferase activity
JKJ11_05585	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_05590	COG2916	Histone family protein nucleoid-structuring protein H-NS
JKJ11_05595	COG1757	Na H antiporter
JKJ11_05605	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JKJ11_05610	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JKJ11_05615	COG0131	Imidazoleglycerol-phosphate dehydratase
JKJ11_05615	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JKJ11_05620	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JKJ11_05625	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JKJ11_05635	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JKJ11_05635	COG0140	phosphoribosyl-ATP diphosphatase activity
JKJ11_05645	COG1216	Glycosyl transferase, family 2
JKJ11_05645	COG0463	Glycosyl transferase, family 2
JKJ11_05660	COG2719	SpoVR family
JKJ11_05665	COG2718	Belongs to the UPF0229 family
JKJ11_05670	COG2766	serine protein kinase
JKJ11_05675	COG3013	Belongs to the UPF0304 family
JKJ11_05680	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ11_05685	COG0840	transmembrane signaling receptor activity
JKJ11_05695	COG1882	Formate acetyltransferase
JKJ11_05720	COG4160	amino acid transport
JKJ11_05725	COG0708	Exodeoxyribonuclease III
JKJ11_05730	COG0840	transmembrane signaling receptor activity
JKJ11_05745	COG0189	ligase activity
JKJ11_05745	COG4067	protein conserved in archaea
JKJ11_05750	COG0500	methyltransferase
JKJ11_05760	COG1801	Protein of unknown function DUF72
JKJ11_05775	COG0217	transcriptional regulatory protein
JKJ11_05780	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JKJ11_05790	COG0632	four-way junction helicase activity
JKJ11_05795	COG2255	four-way junction helicase activity
JKJ11_05800	COG1271	oxidase subunit
JKJ11_05805	COG1294	oxidase, subunit
JKJ11_05810	COG4890	Cyd operon protein YbgT
JKJ11_05820	COG0824	Thioesterase
JKJ11_05825	COG0811	peptide transport
JKJ11_05840	COG0823	Involved in the tonB-independent uptake of proteins
JKJ11_05845	COG2885	chlorophyll binding
JKJ11_05850	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JKJ11_05855	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JKJ11_05880	COG5002	protein histidine kinase activity
JKJ11_05880	COG0784	Response regulator, receiver
JKJ11_05975	COG0019	diaminopimelate decarboxylase activity
JKJ11_05980	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_05985	COG3842	ATPase activity
JKJ11_05995	COG1176	ABC-type spermidine putrescine transport system, permease component I
JKJ11_06000	COG1177	transmembrane transport
JKJ11_06005	COG3700	Belongs to the class B bacterial acid phosphatase family
JKJ11_06020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ11_06030	COG1126	abc transporter atp-binding protein
JKJ11_06035	COG0765	amino acid transport
JKJ11_06040	COG0765	amino acid transport
JKJ11_06055	COG0318	PFAM AMP-dependent synthetase and ligase
JKJ11_06075	COG4191	Histidine kinase
JKJ11_06095	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JKJ11_06100	COG3639	organic phosphonate transmembrane transporter activity
JKJ11_06105	COG3639	organic phosphonate transmembrane transporter activity
JKJ11_06115	COG1349	DNA-binding transcription factor activity
JKJ11_06120	COG0738	Major facilitator superfamily
JKJ11_06125	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
JKJ11_06130	COG1070	Carbohydrate kinase
JKJ11_06135	COG4154	Belongs to the RbsD FucU family
JKJ11_06140	COG0235	Class ii aldolase
JKJ11_06145	COG1454	alcohol dehydrogenase
JKJ11_06160	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_06170	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_06185	COG2188	Transcriptional regulator
JKJ11_06190	COG1735	metal-dependent hydrolase with the TIM-barrel fold
JKJ11_06210	COG3457	Alanine racemase
JKJ11_06215	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JKJ11_06220	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JKJ11_06225	COG4628	conserved protein (DUF2132)
JKJ11_06230	COG0724	RNA recognition motif
JKJ11_06235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JKJ11_06240	COG1609	Transcriptional regulator
JKJ11_06250	COG2211	Major facilitator Superfamily
JKJ11_06260	COG0583	DNA-binding transcription factor activity
JKJ11_06265	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JKJ11_06275	COG2350	Protein conserved in bacteria
JKJ11_06295	COG1301	dicarboxylic acid transport
JKJ11_06300	COG0159	tryptophan synthase activity
JKJ11_06310	COG0134	indole-3-glycerol-phosphate synthase activity
JKJ11_06310	COG0135	phosphoribosylanthranilate isomerase activity
JKJ11_06315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JKJ11_06320	COG0512	Glutamine amidotransferase of anthranilate synthase
JKJ11_06325	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JKJ11_06330	COG0613	PHP domain protein
JKJ11_06335	COG0009	L-threonylcarbamoyladenylate synthase
JKJ11_06340	COG1187	pseudouridine synthase activity
JKJ11_06345	COG4172	Belongs to the ABC transporter superfamily
JKJ11_06360	COG4168	peptide transport system, permease
JKJ11_06370	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JKJ11_06375	COG1842	Phage shock protein A
JKJ11_06390	COG0583	DNA-binding transcription factor activity
JKJ11_06395	COG1486	melibiose metabolic process
JKJ11_06420	COG0519	Catalyzes the synthesis of GMP from XMP
JKJ11_06465	COG0641	radical SAM
JKJ11_06480	COG3119	arylsulfatase activity
JKJ11_06485	COG1309	transcriptional regulator
JKJ11_06515	COG1278	Cold shock
JKJ11_06530	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JKJ11_06535	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JKJ11_06560	COG0626	cystathionine gamma-synthase activity
JKJ11_06570	COG0733	neurotransmitter:sodium symporter activity
JKJ11_06575	COG0564	pseudouridine synthase activity
JKJ11_06580	COG0116	Belongs to the methyltransferase superfamily
JKJ11_06580	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JKJ11_06590	COG3313	Fe-S protein
JKJ11_06595	COG3437	response regulator, receiver
JKJ11_06600	COG3706	GGDEF domain
JKJ11_06615	COG2233	PERMEase
JKJ11_06625	COG3842	ATPase activity
JKJ11_06630	COG0395	ABC-type sugar transport system, permease component
JKJ11_06635	COG1175	transmembrane transport
JKJ11_06645	COG0584	glycerophosphoryl diester phosphodiesterase
JKJ11_06650	COG1349	DNA-binding transcription factor activity
JKJ11_06655	COG3437	response regulator, receiver
JKJ11_06655	COG0784	Response regulator, receiver
JKJ11_06660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_06660	COG1522	sequence-specific DNA binding
JKJ11_06665	COG2313	pseudouridylate synthase activity
JKJ11_06680	COG1342	Belongs to the UPF0251 family
JKJ11_06690	COG3437	response regulator, receiver
JKJ11_06695	COG2205	protein histidine kinase activity
JKJ11_06695	COG0784	Response regulator, receiver
JKJ11_06695	COG5002	protein histidine kinase activity
JKJ11_06700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_06705	COG1349	DNA-binding transcription factor activity
JKJ11_06745	COG1396	sequence-specific DNA binding
JKJ11_06750	COG3135	benzoate transporter
JKJ11_06755	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JKJ11_06780	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JKJ11_06800	COG0471	metal ion transport
JKJ11_06805	COG4191	Histidine kinase
JKJ11_06805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ11_06815	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ11_06820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JKJ11_06820	COG2111	Na H antiporter
JKJ11_06825	COG1006	Multisubunit Na H antiporter MnhC subunit
JKJ11_06830	COG0651	ATP synthesis coupled electron transport
JKJ11_06835	COG1863	multisubunit Na H antiporter MnhE subunit
JKJ11_06840	COG2212	antiporter activity
JKJ11_06845	COG1320	monovalent cation:proton antiporter activity
JKJ11_06855	COG1901	pseudouridine methyltransferase
JKJ11_06875	COG0110	maltose O-acetyltransferase activity
JKJ11_06880	COG1609	Transcriptional regulator
JKJ11_06885	COG1840	ABC-type Fe3 transport system, periplasmic component
JKJ11_06890	COG1175	transmembrane transport
JKJ11_06895	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JKJ11_06900	COG3842	ATPase activity
JKJ11_06905	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JKJ11_06915	COG4221	oxidoreductase activity
JKJ11_06925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JKJ11_06930	COG0628	permease
JKJ11_06965	COG1823	symporter activity
JKJ11_06975	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JKJ11_06985	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
JKJ11_06990	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
JKJ11_07015	COG4139	cobalamin transport
JKJ11_07020	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
JKJ11_07025	COG0659	secondary active sulfate transmembrane transporter activity
JKJ11_07075	COG0583	DNA-binding transcription factor activity
JKJ11_07090	COG0697	spore germination
JKJ11_07095	COG1846	Transcriptional regulator
JKJ11_07105	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JKJ11_07110	COG3960	tartronate-semialdehyde synthase activity
JKJ11_07115	COG3622	Belongs to the hyi family
JKJ11_07120	COG2084	Dehydrogenase
JKJ11_07145	COG0346	lactoylglutathione lyase activity
JKJ11_07160	COG2252	PERMEase
JKJ11_07180	COG4266	Belongs to the allantoicase family
JKJ11_07185	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
JKJ11_07200	COG4221	oxidoreductase activity
JKJ11_07225	COG0114	fumarate hydratase activity
JKJ11_07230	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_07235	COG0583	DNA-binding transcription factor activity
JKJ11_07240	COG0667	Aldo Keto reductase
JKJ11_07245	COG0006	proline dipeptidase activity
JKJ11_07250	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_07255	COG1733	regulation of RNA biosynthetic process
JKJ11_07265	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JKJ11_07285	COG1917	Cupin 2, conserved barrel domain protein
JKJ11_07285	COG2207	Transcriptional regulator
JKJ11_07300	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_07315	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JKJ11_07330	COG0402	S-adenosylhomocysteine deaminase activity
JKJ11_07340	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JKJ11_07350	COG2186	Transcriptional regulator
JKJ11_07355	COG0861	Integral membrane protein TerC family
JKJ11_07375	COG0183	Belongs to the thiolase family
JKJ11_07380	COG1082	Xylose isomerase domain protein TIM barrel
JKJ11_07390	COG0583	DNA-binding transcription factor activity
JKJ11_07395	COG2814	Major facilitator Superfamily
JKJ11_07395	COG0477	Major facilitator Superfamily
JKJ11_07405	COG3962	Belongs to the TPP enzyme family
JKJ11_07410	COG0673	inositol 2-dehydrogenase activity
JKJ11_07415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_07435	COG1082	Xylose isomerase domain protein TIM barrel
JKJ11_07440	COG3718	enzyme involved in inositol metabolism
JKJ11_07445	COG0673	inositol 2-dehydrogenase activity
JKJ11_07455	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ11_07460	COG1129	ABC transporter
JKJ11_07490	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JKJ11_07510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_07530	COG2208	phosphoserine phosphatase activity
JKJ11_07535	COG1366	Belongs to the anti-sigma-factor antagonist family
JKJ11_07540	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JKJ11_07550	COG3250	beta-galactosidase activity
JKJ11_07590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JKJ11_07600	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JKJ11_07605	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JKJ11_07710	COG5507	3-demethylubiquinone-9 3-methyltransferase
JKJ11_07780	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_07810	COG0405	Gamma-glutamyltransferase
JKJ11_07830	COG1132	(ABC) transporter
JKJ11_07855	COG2205	protein histidine kinase activity
JKJ11_07855	COG0784	Response regulator, receiver
JKJ11_07855	COG5002	protein histidine kinase activity
JKJ11_07875	COG0183	Belongs to the thiolase family
JKJ11_07885	COG3243	poly(R)-hydroxyalkanoic acid synthase
JKJ11_07895	COG1301	dicarboxylic acid transport
JKJ11_07925	COG4565	transcriptional regulatory protein
JKJ11_07930	COG2165	general secretion pathway protein
JKJ11_07950	COG2186	Transcriptional regulator
JKJ11_07955	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JKJ11_07960	COG0372	Belongs to the citrate synthase family
JKJ11_07970	COG2828	Protein conserved in bacteria
JKJ11_07995	COG1115	amino acid carrier protein
JKJ11_08035	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JKJ11_08040	COG0295	cytidine deaminase activity
JKJ11_08045	COG1346	cytolysis
JKJ11_08055	COG2925	Exonuclease
JKJ11_08080	COG0456	acetyltransferase
JKJ11_08095	COG0384	phenazine biosynthesis protein PhzF
JKJ11_08130	COG1566	PFAM secretion protein HlyD family protein
JKJ11_08140	COG0628	permease
JKJ11_08180	COG0443	Heat shock 70 kDa protein
JKJ11_08195	COG3706	GGDEF domain
JKJ11_08225	COG1643	Atp-dependent helicase
JKJ11_08235	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JKJ11_08255	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JKJ11_08260	COG1280	lysine exporter protein (LysE YggA)
JKJ11_08275	COG0746	molybdenum cofactor guanylyltransferase activity
JKJ11_08280	COG3842	ATPase activity
JKJ11_08285	COG4662	Binding-protein-dependent transport system inner membrane component
JKJ11_08295	COG2204	response regulator
JKJ11_08300	COG3852	Histidine kinase
JKJ11_08325	COG0488	(ABC) transporter
JKJ11_08330	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JKJ11_08360	COG0243	molybdopterin cofactor binding
JKJ11_08360	COG3383	formate dehydrogenase (NAD+) activity
JKJ11_08365	COG0437	4 iron, 4 sulfur cluster binding
JKJ11_08380	COG0004	ammonium transporteR
JKJ11_08385	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JKJ11_08390	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JKJ11_08395	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JKJ11_08400	COG1177	transmembrane transport
JKJ11_08410	COG3842	ATPase activity
JKJ11_08435	COG0589	response to stress
JKJ11_08440	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JKJ11_08455	COG2217	Heavy metal translocating P-type atpase
JKJ11_08465	COG2010	Cytochrome c
JKJ11_08480	COG3278	Belongs to the heme-copper respiratory oxidase family
JKJ11_08490	COG1132	(ABC) transporter
JKJ11_08495	COG2274	protein secretion by the type I secretion system
JKJ11_08650	COG3120	sequence-specific DNA binding
JKJ11_08655	COG1067	ATP-dependent peptidase activity
JKJ11_08660	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JKJ11_08675	COG0488	(ABC) transporter
JKJ11_08685	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JKJ11_08685	COG0116	Belongs to the methyltransferase superfamily
JKJ11_08695	COG0167	dihydroorotate dehydrogenase activity
JKJ11_08710	COG0308	aminopeptidase N
JKJ11_08725	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
JKJ11_08730	COG1956	GAF domain-containing protein
JKJ11_08735	COG1132	(ABC) transporter
JKJ11_08740	COG2995	paraquat-inducible protein a
JKJ11_08745	COG3008	intermembrane lipid transfer
JKJ11_08750	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
JKJ11_08750	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JKJ11_08755	COG2996	Protein conserved in bacteria
JKJ11_08775	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JKJ11_08780	COG1666	GTP binding
JKJ11_08790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ11_08795	COG4597	amino acid ABC transporter
JKJ11_08800	COG0765	amino acid transport
JKJ11_08805	COG1126	abc transporter atp-binding protein
JKJ11_08810	COG0670	Belongs to the BI1 family
JKJ11_08815	COG2920	part of a sulfur-relay system
JKJ11_08820	COG1254	Belongs to the acylphosphatase family
JKJ11_08825	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JKJ11_08835	COG2885	chlorophyll binding
JKJ11_08835	COG3047	cAMP biosynthetic process
JKJ11_08850	COG0602	queuosine metabolic process
JKJ11_08855	COG0561	phosphatase activity
JKJ11_08860	COG1597	lipid kinase activity
JKJ11_08865	COG1940	carbohydrate kinase activity
JKJ11_08870	COG3148	PFAM DTW domain containing protein
JKJ11_08880	COG0840	transmembrane signaling receptor activity
JKJ11_08885	COG0791	NLP P60 protein
JKJ11_08895	COG3001	Fructosamine kinase
JKJ11_08930	COG0454	-acetyltransferase
JKJ11_08950	COG0668	transmembrane transport
JKJ11_08975	COG4667	esterase of the alpha-beta hydrolase superfamily
JKJ11_09005	COG4235	cytochrome complex assembly
JKJ11_09005	COG3088	subunit of a heme lyase
JKJ11_09010	COG1138	Cytochrome C-type biogenesis protein
JKJ11_09015	COG3301	Polysulphide reductase, NrfD
JKJ11_09020	COG0437	4 iron, 4 sulfur cluster binding
JKJ11_09030	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
JKJ11_09040	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JKJ11_09050	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JKJ11_09060	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JKJ11_09080	COG0500	methyltransferase
JKJ11_09095	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JKJ11_09095	COG0072	phenylalanine-tRNA ligase activity
JKJ11_09105	COG2226	methyltransferase
JKJ11_09120	COG2249	NAD(P)H dehydrogenase (quinone) activity
JKJ11_09130	COG0534	Mate efflux family protein
JKJ11_09145	COG0668	transmembrane transport
JKJ11_09150	COG2814	Major facilitator Superfamily
JKJ11_09165	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JKJ11_09185	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JKJ11_09195	COG2116	formate transmembrane transporter activity
JKJ11_09200	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JKJ11_09200	COG1648	precorrin-2 dehydrogenase activity
JKJ11_09205	COG2885	chlorophyll binding
JKJ11_09255	COG4964	Belongs to the GSP D family
JKJ11_09290	COG3047	cAMP biosynthetic process
JKJ11_09290	COG2885	chlorophyll binding
JKJ11_09330	COG0455	bacterial-type flagellum organization
JKJ11_09340	COG4964	Belongs to the GSP D family
JKJ11_09360	COG0583	DNA-binding transcription factor activity
JKJ11_09370	COG2375	cellular response to nickel ion
JKJ11_09385	COG0814	amino acid
JKJ11_09390	COG3033	Beta-eliminating lyase
JKJ11_09415	COG0583	DNA-binding transcription factor activity
JKJ11_09535	COG2815	serine threonine protein kinase
JKJ11_09535	COG0515	serine threonine protein kinase
JKJ11_09555	COG0247	lactate metabolic process
JKJ11_09555	COG0277	FAD linked oxidase domain protein
JKJ11_09585	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JKJ11_09600	COG0281	malic enzyme
JKJ11_09610	COG2949	membrane
JKJ11_09620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_09630	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JKJ11_09645	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JKJ11_09655	COG0492	ferredoxin-NADP+ reductase activity
JKJ11_09660	COG4988	ABC transporter
JKJ11_09665	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JKJ11_09670	COG1253	flavin adenine dinucleotide binding
JKJ11_09675	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JKJ11_09700	COG3070	regulator of competence-specific genes
JKJ11_09710	COG2431	L-lysine efflux transmembrane transporter activity
JKJ11_09720	COG0076	glutamate decarboxylase activity
JKJ11_09725	COG1737	Transcriptional regulator
JKJ11_09730	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_09730	COG1454	alcohol dehydrogenase
JKJ11_09735	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JKJ11_09750	COG1960	acyl-CoA dehydrogenase activity
JKJ11_09755	COG1309	transcriptional regulator
JKJ11_09760	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JKJ11_09770	COG0577	efflux transmembrane transporter activity
JKJ11_09775	COG1136	(ABC) transporter
JKJ11_09780	COG0702	epimerase
JKJ11_09790	COG2814	Major facilitator Superfamily
JKJ11_09800	COG1061	Type III restriction enzyme res subunit
JKJ11_09855	COG0714	Associated with various cellular activities
JKJ11_09860	COG3119	arylsulfatase activity
JKJ11_09870	COG0641	radical SAM
JKJ11_09885	COG0583	DNA-binding transcription factor activity
JKJ11_09940	COG2207	Transcriptional regulator
JKJ11_09945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_09950	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JKJ11_09960	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ11_09965	COG1882	Formate acetyltransferase
JKJ11_09970	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_09975	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_09980	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_09980	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_09980	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JKJ11_09985	COG4702	Belongs to the UPF0303 family
JKJ11_09990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_10015	COG1132	(ABC) transporter
JKJ11_10020	COG1132	(ABC) transporter
JKJ11_10030	COG3608	succinylglutamate desuccinylase aspartoacylase
JKJ11_10035	COG4608	Belongs to the ABC transporter superfamily
JKJ11_10040	COG0444	Belongs to the ABC transporter superfamily
JKJ11_10045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JKJ11_10050	COG0601	transmembrane transport
JKJ11_10065	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JKJ11_10075	COG1072	(Pantothenic acid kinase))
JKJ11_10085	COG1063	alcohol dehydrogenase
JKJ11_10090	COG2213	PTS system mannitol-specific
JKJ11_10095	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_10110	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JKJ11_10115	COG1845	cytochrome c oxidase, subunit III
JKJ11_10120	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JKJ11_10125	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JKJ11_10130	COG0583	DNA-binding transcription factor activity
JKJ11_10135	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JKJ11_10160	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JKJ11_10165	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JKJ11_10175	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JKJ11_10220	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JKJ11_10225	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_10235	COG2015	COG2015, Alkyl sulfatase and related hydrolases
JKJ11_10240	COG0583	DNA-binding transcription factor activity
JKJ11_10245	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_10295	COG3040	lipid binding
JKJ11_10300	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JKJ11_10305	COG0584	glycerophosphoryl diester phosphodiesterase
JKJ11_10320	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ11_10350	COG0318	PFAM AMP-dependent synthetase and ligase
JKJ11_10355	COG3063	Type IV pilus biogenesis stability protein PilW
JKJ11_10360	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
JKJ11_10365	COG1451	nucleotide metabolic process
JKJ11_10380	COG0679	Auxin Efflux Carrier
JKJ11_10385	COG0149	triose-phosphate isomerase activity
JKJ11_10390	COG1461	Dihydroxyacetone kinase
JKJ11_10395	COG2376	Dihydroxyacetone kinase
JKJ11_10405	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_10405	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_10415	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_10420	COG0698	ribose 5-phosphate isomerase
JKJ11_10425	COG1494	fructose-1,6-bisphosphatase
JKJ11_10440	COG1686	Belongs to the peptidase S11 family
JKJ11_10445	COG1301	dicarboxylic acid transport
JKJ11_10450	COG1252	NADH dehydrogenase
JKJ11_10455	COG2199	diguanylate cyclase activity
JKJ11_10460	COG4134	Bacterial extracellular solute-binding protein
JKJ11_10465	COG4135	transport system, permease component
JKJ11_10470	COG4136	ATPase activity
JKJ11_10475	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JKJ11_10485	COG0656	L-ascorbic acid biosynthetic process
JKJ11_10505	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JKJ11_10510	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JKJ11_10515	COG1609	Transcriptional regulator
JKJ11_10535	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ11_10540	COG1760	l-serine dehydratase
JKJ11_10555	COG0395	ABC-type sugar transport system, permease component
JKJ11_10565	COG3842	ATPase activity
JKJ11_10570	COG3842	ATPase activity
JKJ11_10575	COG3284	Transcriptional regulator
JKJ11_10580	COG2249	NAD(P)H dehydrogenase (quinone) activity
JKJ11_10585	COG0583	DNA-binding transcription factor activity
JKJ11_10595	COG3768	UPF0283 membrane protein
JKJ11_10600	COG3106	COG3106 Predicted ATPase
JKJ11_10620	COG5002	protein histidine kinase activity
JKJ11_10620	COG0784	Response regulator, receiver
JKJ11_10635	COG1716	ATPase activity
JKJ11_10635	COG5001	Diguanylate cyclase
JKJ11_10660	COG0494	nUDIX hydrolase
JKJ11_10665	COG0814	amino acid
JKJ11_10670	COG1760	l-serine dehydratase
JKJ11_10675	COG0720	synthase
JKJ11_10685	COG0463	Glycosyl transferase, family 2
JKJ11_10700	COG0017	Asparaginyl-tRNA synthetase
JKJ11_10710	COG1448	Aminotransferase
JKJ11_10725	COG0840	transmembrane signaling receptor activity
JKJ11_10735	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_10740	COG1846	Transcriptional regulator
JKJ11_10765	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
JKJ11_10780	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JKJ11_10785	COG3108	Peptidase M15
JKJ11_10790	COG2989	Protein conserved in bacteria
JKJ11_10815	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JKJ11_10830	COG0513	Belongs to the DEAD box helicase family
JKJ11_10845	COG3302	dmso reductase anchor subunit
JKJ11_10850	COG0437	4 iron, 4 sulfur cluster binding
JKJ11_10855	COG0243	molybdopterin cofactor binding
JKJ11_10875	COG0745	RESPONSE REGULATOR receiver
JKJ11_10900	COG1263	PTS System
JKJ11_10900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_10905	COG1621	beta-fructofuranosidase activity
JKJ11_10920	COG0019	diaminopimelate decarboxylase activity
JKJ11_10935	COG0307	riboflavin synthase, alpha
JKJ11_10965	COG0322	excinuclease ABC activity
JKJ11_10970	COG2197	response regulator
JKJ11_10975	COG0417	DNA replication proofreading
JKJ11_10985	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JKJ11_10995	COG0671	phosphoesterase, PA-phosphatase related
JKJ11_11005	COG1227	inorganic diphosphatase activity
JKJ11_11020	COG0243	molybdopterin cofactor binding
JKJ11_11025	COG3005	denitrification pathway
JKJ11_11030	COG4459	periplasmic nitrate reductase
JKJ11_11035	COG0390	transport system, permease component
JKJ11_11045	COG2116	formate transmembrane transporter activity
JKJ11_11065	COG0583	DNA-binding transcription factor activity
JKJ11_11080	COG0215	cysteine-tRNA ligase activity
JKJ11_11085	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JKJ11_11090	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JKJ11_11095	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JKJ11_11100	COG3012	SEC-C Motif Domain Protein
JKJ11_11145	COG0438	transferase activity, transferring glycosyl groups
JKJ11_11175	COG0438	transferase activity, transferring glycosyl groups
JKJ11_11185	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JKJ11_11190	COG2076	Multidrug Resistance protein
JKJ11_11195	COG2076	Multidrug Resistance protein
JKJ11_11200	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JKJ11_11205	COG0726	polysaccharide deacetylase
JKJ11_11210	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JKJ11_11210	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JKJ11_11215	COG0463	Glycosyl transferase, family 2
JKJ11_11220	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JKJ11_11260	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JKJ11_11265	COG1199	ATP-dependent helicase activity
JKJ11_11270	COG0730	response to heat
JKJ11_11285	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JKJ11_11290	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JKJ11_11295	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
JKJ11_11300	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JKJ11_11305	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JKJ11_11310	COG0745	RESPONSE REGULATOR receiver
JKJ11_11325	COG3070	regulator of competence-specific genes
JKJ11_11345	COG0297	glycogen (starch) synthase activity
JKJ11_11350	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ11_11355	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JKJ11_11370	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JKJ11_11380	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JKJ11_11385	COG0542	response to heat
JKJ11_11395	COG1278	Cold shock
JKJ11_11405	COG1187	pseudouridine synthase activity
JKJ11_11410	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JKJ11_11415	COG2835	tetraacyldisaccharide 4'-kinase activity
JKJ11_11420	COG1663	tetraacyldisaccharide 4'-kinase activity
JKJ11_11425	COG1132	(ABC) transporter
JKJ11_11430	COG0658	competence protein
JKJ11_11430	COG2333	competence protein COMEC
JKJ11_11440	COG4591	ABC-type transport system involved in lipoprotein release permease component
JKJ11_11445	COG1136	(ABC) transporter
JKJ11_11450	COG4591	ABC-type transport system involved in lipoprotein release permease component
JKJ11_11460	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JKJ11_11475	COG1252	NADH dehydrogenase
JKJ11_11480	COG4932	domain protein
JKJ11_11480	COG5492	domain, Protein
JKJ11_11490	COG3150	esterase
JKJ11_11505	COG5633	Lipoprotein
JKJ11_11515	COG0537	adenosine 5'-monophosphoramidase activity
JKJ11_11535	COG0583	DNA-binding transcription factor activity
JKJ11_11540	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_11550	COG0280	phosphate acetyltransferase
JKJ11_11555	COG0019	diaminopimelate decarboxylase activity
JKJ11_11565	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
JKJ11_11570	COG2217	Heavy metal translocating P-type atpase
JKJ11_11580	COG0517	IMP dehydrogenase activity
JKJ11_11580	COG0617	tRNA 3'-terminal CCA addition
JKJ11_11580	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JKJ11_11595	COG2223	nitrite transmembrane transporter activity
JKJ11_11605	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JKJ11_11610	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JKJ11_11610	COG1648	precorrin-2 dehydrogenase activity
JKJ11_11615	COG0243	molybdopterin cofactor binding
JKJ11_11620	COG0569	domain protein
JKJ11_11625	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JKJ11_11630	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JKJ11_11640	COG0561	phosphatase activity
JKJ11_11645	COG0314	molybdopterin synthase activity
JKJ11_11650	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JKJ11_11655	COG0315	cyclic pyranopterin monophosphate synthase activity
JKJ11_11660	COG0521	Mo-molybdopterin cofactor biosynthetic process
JKJ11_11665	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JKJ11_11670	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JKJ11_11675	COG2198	Histidine kinase
JKJ11_11680	COG2204	response regulator
JKJ11_11685	COG0556	nucleotide-excision repair
JKJ11_11695	COG4657	Part of a membrane complex involved in electron transport
JKJ11_11700	COG2878	Part of a membrane complex involved in electron transport
JKJ11_11705	COG4656	Part of a membrane complex involved in electron transport
JKJ11_11710	COG4658	electron transport chain
JKJ11_11715	COG4659	FMN binding
JKJ11_11720	COG4660	Part of a membrane complex involved in electron transport
JKJ11_11725	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JKJ11_11730	COG0346	lactoylglutathione lyase activity
JKJ11_11745	COG2056	Na+-H+ antiporter family
JKJ11_11750	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JKJ11_11770	COG1454	alcohol dehydrogenase
JKJ11_11770	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_11775	COG2095	MarC family integral membrane protein
JKJ11_11780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JKJ11_11785	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JKJ11_11800	COG3081	Nucleoid-associated protein
JKJ11_11805	COG3082	Protein of unknown function (DUF1414)
JKJ11_11810	COG3083	sulfuric ester hydrolase activity
JKJ11_11830	COG0494	nUDIX hydrolase
JKJ11_11835	COG0123	including yeast histone deacetylase and acetoin utilization protein
JKJ11_11845	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JKJ11_11850	COG0778	Nitroreductase
JKJ11_11855	COG1902	pentaerythritol trinitrate reductase activity
JKJ11_11855	COG0446	pyridine nucleotide-disulphide oxidoreductase
JKJ11_11860	COG0616	signal peptide processing
JKJ11_11865	COG0252	asparaginase activity
JKJ11_11870	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JKJ11_11875	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JKJ11_11880	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JKJ11_11890	COG2982	Protein involved in outer membrane biogenesis
JKJ11_11895	COG0572	uridine kinase
JKJ11_11900	COG0489	protein tyrosine kinase activity
JKJ11_11905	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JKJ11_11905	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JKJ11_11915	COG2186	Transcriptional regulator
JKJ11_11920	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JKJ11_11930	COG0653	protein targeting
JKJ11_11935	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JKJ11_11940	COG0366	Alpha amylase catalytic
JKJ11_11950	COG4120	Belongs to the binding-protein-dependent transport system permease family
JKJ11_11960	COG2133	pyrroloquinoline quinone binding
JKJ11_11965	COG3092	negative regulation of chromosome organization
JKJ11_11970	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JKJ11_11975	COG0857	belongs to the CobB CobQ family
JKJ11_11975	COG0280	phosphate acetyltransferase
JKJ11_11980	COG0435	Glutathione S-transferase
JKJ11_11990	COG0444	Belongs to the ABC transporter superfamily
JKJ11_11995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JKJ11_12000	COG0601	transmembrane transport
JKJ11_12015	COG0318	PFAM AMP-dependent synthetase and ligase
JKJ11_12025	COG0673	inositol 2-dehydrogenase activity
JKJ11_12035	COG4206	TonB-dependent receptor
JKJ11_12050	COG3101	peptidyl-lysine hydroxylation
JKJ11_12055	COG2860	membrane
JKJ11_12065	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JKJ11_12070	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JKJ11_12075	COG2890	protein-(glutamine-N5) methyltransferase activity
JKJ11_12080	COG2840	Smr protein MutS2
JKJ11_12085	COG2062	phosphohistidine phosphatase, SixA
JKJ11_12095	COG1250	3-hydroxyacyl-CoA dehydrogenase
JKJ11_12095	COG1024	Enoyl-CoA hydratase
JKJ11_12100	COG0183	Belongs to the thiolase family
JKJ11_12115	COG2067	long-chain fatty acid transport protein
JKJ11_12120	COG2067	long-chain fatty acid transport protein
JKJ11_12125	COG2853	Lipoprotein
JKJ11_12140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JKJ11_12145	COG1138	Cytochrome C-type biogenesis protein
JKJ11_12155	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JKJ11_12160	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JKJ11_12165	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JKJ11_12170	COG4133	protoheme IX ABC transporter activity
JKJ11_12180	COG0835	chemotaxis
JKJ11_12190	COG1192	Involved in chromosome partitioning
JKJ11_12195	COG2201	protein-glutamate methylesterase activity
JKJ11_12200	COG0784	Response regulator, receiver
JKJ11_12200	COG2198	Histidine kinase
JKJ11_12200	COG0643	Histidine kinase
JKJ11_12205	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
JKJ11_12245	COG1987	bacterial-type flagellum assembly
JKJ11_12295	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JKJ11_12305	COG1677	Flagellar hook-basal body complex protein FliE
JKJ11_12325	COG1516	flagellar protein fliS
JKJ11_12335	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JKJ11_12340	COG1334	flagellar protein FlaG
JKJ11_12345	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_12350	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_12370	COG3951	Flagellar rod assembly protein muramidase FlgJ
JKJ11_12370	COG1705	Flagellar rod assembly protein muramidase FlgJ
JKJ11_12375	COG1706	bacterial-type flagellum-dependent cell motility
JKJ11_12380	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
JKJ11_12390	COG4787	bacterial-type flagellum-dependent cell motility
JKJ11_12395	COG1749	Flagellar hook protein flgE
JKJ11_12410	COG1815	bacterial-type flagellum-dependent cell motility
JKJ11_12420	COG0784	Response regulator, receiver
JKJ11_12420	COG0835	chemotaxis
JKJ11_12495	COG1733	regulation of RNA biosynthetic process
JKJ11_12520	COG1846	Transcriptional regulator
JKJ11_12530	COG0772	Belongs to the SEDS family
JKJ11_12535	COG0586	Pfam SNARE associated Golgi protein
JKJ11_12545	COG3111	PFAM Bacterial OB fold (BOF) protein
JKJ11_12550	COG4821	SIS domain
JKJ11_12560	COG0741	lytic transglycosylase activity
JKJ11_12565	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_12580	COG2271	Major facilitator Superfamily
JKJ11_12585	COG3851	Histidine kinase
JKJ11_12590	COG2197	response regulator
JKJ11_12600	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JKJ11_12605	COG1757	Na H antiporter
JKJ11_12615	COG0513	Belongs to the DEAD box helicase family
JKJ11_12625	COG2239	Acts as a magnesium transporter
JKJ11_12655	COG1024	Enoyl-CoA hydratase
JKJ11_12670	COG0204	Acyl-transferase
JKJ11_12675	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JKJ11_12680	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JKJ11_12685	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JKJ11_12705	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JKJ11_12705	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JKJ11_12710	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JKJ11_12715	COG0564	pseudouridine synthase activity
JKJ11_12720	COG3098	single-species biofilm formation
JKJ11_12745	COG1671	Belongs to the UPF0178 family
JKJ11_12750	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JKJ11_12765	COG1073	alpha beta
JKJ11_12770	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
JKJ11_12775	COG2252	PERMEase
JKJ11_12780	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ11_12795	COG0733	neurotransmitter:sodium symporter activity
JKJ11_12805	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JKJ11_12810	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JKJ11_12815	COG2991	Protein conserved in bacteria
JKJ11_12820	COG1477	protein flavinylation
JKJ11_12825	COG2871	sodium ion transport
JKJ11_12830	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ11_12840	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ11_12850	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ11_12855	COG0271	Belongs to the BolA IbaG family
JKJ11_12860	COG2813	Specifically methylates the guanine in position
JKJ11_12870	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JKJ11_12875	COG2211	Major facilitator Superfamily
JKJ11_12885	COG1595	DNA-templated transcription, initiation
JKJ11_12900	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JKJ11_12905	COG0693	protein deglycase activity
JKJ11_12910	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JKJ11_12915	COG2166	iron-sulfur cluster assembly
JKJ11_12920	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JKJ11_12925	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JKJ11_12935	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JKJ11_12935	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JKJ11_12945	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JKJ11_12950	COG1074	ATP-dependent DNA helicase activity
JKJ11_12955	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JKJ11_12965	COG0583	DNA-binding transcription factor activity
JKJ11_12970	COG3141	response to X-ray
JKJ11_12975	COG2171	N-acyltransferase activity
JKJ11_12980	COG0250	Participates in transcription elongation, termination and antitermination
JKJ11_12985	COG3104	oligopeptide transport
JKJ11_12990	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JKJ11_13000	COG0326	Molecular chaperone. Has ATPase activity
JKJ11_13005	COG3710	Transcriptional regulator
JKJ11_13015	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JKJ11_13025	COG2837	iron assimilation
JKJ11_13050	COG1393	Belongs to the ArsC family
JKJ11_13060	COG1876	peptidase activity
JKJ11_13070	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JKJ11_13080	COG2716	regulation of RNA biosynthetic process
JKJ11_13110	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JKJ11_13125	COG1061	Type III restriction enzyme res subunit
JKJ11_13195	COG1538	Outer membrane efflux protein
JKJ11_13220	COG3447	MASE1 domain protein
JKJ11_13220	COG5001	Diguanylate cyclase
JKJ11_13220	COG5002	protein histidine kinase activity
JKJ11_13245	COG4783	chaperone-mediated protein folding
JKJ11_13250	COG1393	Belongs to the ArsC family
JKJ11_13270	COG2233	PERMEase
JKJ11_13275	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JKJ11_13280	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JKJ11_13285	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JKJ11_13290	COG0121	glutamine amidotransferase
JKJ11_13300	COG1960	acyl-CoA dehydrogenase activity
JKJ11_13315	COG0328	RNA-DNA hybrid ribonuclease activity
JKJ11_13320	COG2226	methyltransferase
JKJ11_13330	COG0741	lytic transglycosylase activity
JKJ11_13330	COG1388	LysM domain
JKJ11_13340	COG0347	Belongs to the P(II) protein family
JKJ11_13355	COG0825	malonyl-CoA metabolic process
JKJ11_13360	COG0587	DNA-directed DNA polymerase activity
JKJ11_13370	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JKJ11_13380	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JKJ11_13385	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JKJ11_13390	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
JKJ11_13395	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ11_13400	COG0750	zinc metalloprotease
JKJ11_13405	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JKJ11_13410	COG0575	Belongs to the CDS family
JKJ11_13415	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JKJ11_13440	COG0024	Methionine aminopeptidase
JKJ11_13455	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JKJ11_13460	COG1720	tRNA m6t6A37 methyltransferase activity
JKJ11_13465	COG0442	prolyl-tRNA aminoacylation
JKJ11_13480	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JKJ11_13480	COG0047	phosphoribosylformylglycinamidine synthase activity
JKJ11_13485	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JKJ11_13500	COG0583	DNA-binding transcription factor activity
JKJ11_13505	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JKJ11_13515	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JKJ11_13545	COG0484	heat shock protein binding
JKJ11_13555	COG1301	dicarboxylic acid transport
JKJ11_13560	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JKJ11_13565	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JKJ11_13570	COG0497	DNA recombination
JKJ11_13575	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ11_13580	COG2914	Belongs to the UPF0125 (RnfH) family
JKJ11_13585	COG2867	negative regulation of translational initiation
JKJ11_13600	COG1289	transmembrane transporter activity
JKJ11_13625	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JKJ11_13640	COG1116	anion transmembrane transporter activity
JKJ11_13645	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JKJ11_13650	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JKJ11_13655	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JKJ11_13660	COG1115	amino acid carrier protein
JKJ11_13665	COG1584	GPR1 FUN34 yaaH family protein
JKJ11_13670	COG0519	Catalyzes the synthesis of GMP from XMP
JKJ11_13670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JKJ11_13675	COG0516	GMP reductase activity
JKJ11_13675	COG0517	IMP dehydrogenase activity
JKJ11_13690	COG3706	GGDEF domain
JKJ11_13700	COG1160	GTP binding
JKJ11_13705	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ11_13710	COG2976	Protein conserved in bacteria
JKJ11_13715	COG0124	histidyl-tRNA synthetase
JKJ11_13720	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JKJ11_13740	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JKJ11_13745	COG2975	iron-sulfur cluster assembly
JKJ11_13750	COG0633	Ferredoxin
JKJ11_13755	COG0443	Heat shock 70 kDa protein
JKJ11_13765	COG0316	Belongs to the HesB IscA family
JKJ11_13770	COG0822	iron-sulfur transferase activity
JKJ11_13775	COG1104	cysteine desulfurase activity
JKJ11_13785	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JKJ11_13790	COG0483	inositol monophosphate 1-phosphatase activity
JKJ11_13795	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_13800	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_13805	COG1862	Preprotein translocase
JKJ11_13810	COG0343	queuine tRNA-ribosyltransferase activity
JKJ11_13815	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JKJ11_13820	COG0517	IMP dehydrogenase activity
JKJ11_13825	COG0583	DNA-binding transcription factor activity
JKJ11_13830	COG0450	alkyl hydroperoxide reductase
JKJ11_13850	COG0704	Plays a role in the regulation of phosphate uptake
JKJ11_13855	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JKJ11_13860	COG0581	inorganic phosphate transmembrane transporter activity
JKJ11_13865	COG0573	inorganic phosphate transmembrane transporter activity
JKJ11_13870	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JKJ11_13875	COG0248	Ppx GppA phosphatase
JKJ11_13885	COG5002	protein histidine kinase activity
JKJ11_13890	COG0745	RESPONSE REGULATOR receiver
JKJ11_13895	COG2974	May be involved in recombination
JKJ11_13900	COG0826	peptidase U32
JKJ11_13905	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JKJ11_13955	COG0542	response to heat
JKJ11_13960	COG1496	oxidoreductase activity
JKJ11_13965	COG0564	pseudouridine synthase activity
JKJ11_13970	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JKJ11_13975	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JKJ11_13980	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JKJ11_13985	COG1605	Chorismate mutase
JKJ11_13985	COG0077	Prephenate dehydratase
JKJ11_13995	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JKJ11_14010	COG0488	(ABC) transporter
JKJ11_14015	COG0739	heme binding
JKJ11_14020	COG1605	Chorismate mutase
JKJ11_14020	COG0287	Prephenate dehydrogenase
JKJ11_14025	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JKJ11_14030	COG3275	phosphorelay sensor kinase activity
JKJ11_14035	COG3279	Response regulator of the LytR AlgR family
JKJ11_14040	COG1472	Belongs to the glycosyl hydrolase 3 family
JKJ11_14045	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JKJ11_14060	COG1966	Carbon starvation protein
JKJ11_14075	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JKJ11_14080	COG0083	homoserine kinase activity
JKJ11_14095	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JKJ11_14105	COG0745	RESPONSE REGULATOR receiver
JKJ11_14115	COG5002	protein histidine kinase activity
JKJ11_14115	COG2198	Histidine kinase
JKJ11_14115	COG0784	Response regulator, receiver
JKJ11_14120	COG1242	4 iron, 4 sulfur cluster binding
JKJ11_14125	COG0070	glutamate synthase
JKJ11_14125	COG0067	glutamate synthase
JKJ11_14125	COG0069	glutamate synthase activity
JKJ11_14135	COG0067	glutamate synthase
JKJ11_14135	COG0069	glutamate synthase activity
JKJ11_14135	COG0070	glutamate synthase
JKJ11_14140	COG0493	'glutamate synthase
JKJ11_14150	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JKJ11_14160	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JKJ11_14165	COG2860	membrane
JKJ11_14170	COG1119	ATPase activity
JKJ11_14180	COG0583	DNA-binding transcription factor activity
JKJ11_14185	COG0730	response to heat
JKJ11_14195	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JKJ11_14205	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JKJ11_14210	COG0494	nUDIX hydrolase
JKJ11_14225	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JKJ11_14230	COG0849	cell division
JKJ11_14235	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JKJ11_14240	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JKJ11_14245	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JKJ11_14250	COG0772	Belongs to the SEDS family
JKJ11_14265	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JKJ11_14270	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JKJ11_14275	COG0768	penicillin binding
JKJ11_14280	COG3116	cell division
JKJ11_14285	COG0275	rRNA processing
JKJ11_14295	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JKJ11_14300	COG3107	peptidoglycan biosynthetic process
JKJ11_14305	COG0792	nuclease activity
JKJ11_14310	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JKJ11_14325	COG0028	Belongs to the TPP enzyme family
JKJ11_14340	COG0316	Belongs to the HesB IscA family
JKJ11_14345	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JKJ11_14350	COG0628	permease
JKJ11_14360	COG2205	protein histidine kinase activity
JKJ11_14360	COG0784	Response regulator, receiver
JKJ11_14365	COG1049	propionate catabolic process, 2-methylcitrate cycle
JKJ11_14370	COG1752	Esterase of the alpha-beta hydrolase superfamily
JKJ11_14375	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JKJ11_14380	COG1643	Atp-dependent helicase
JKJ11_14395	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JKJ11_14405	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JKJ11_14410	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JKJ11_14425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JKJ11_14430	COG3025	triphosphatase activity
JKJ11_14435	COG1392	Phosphate transport regulator
JKJ11_14440	COG0306	phosphate transporter
JKJ11_14445	COG4991	sh3 domain protein
JKJ11_14450	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JKJ11_14455	COG1388	LysM domain
JKJ11_14455	COG4942	peptidase
JKJ11_14460	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JKJ11_14470	COG0585	pseudouridine synthase activity
JKJ11_14475	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JKJ11_14480	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JKJ11_14485	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JKJ11_14505	COG2203	Gaf domain
JKJ11_14505	COG2199	diguanylate cyclase activity
JKJ11_14510	COG0798	PFAM Bile acid sodium symporter
JKJ11_14530	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JKJ11_14535	COG0640	Transcriptional regulator
JKJ11_14540	COG1737	Transcriptional regulator
JKJ11_14550	COG1263	PTS System
JKJ11_14550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_14555	COG0698	ribose 5-phosphate isomerase
JKJ11_14560	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JKJ11_14565	COG0640	Transcriptional regulator
JKJ11_14575	COG0469	pyruvate kinase activity
JKJ11_14595	COG1459	type II secretion system
JKJ11_14600	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JKJ11_14635	COG2165	general secretion pathway protein
JKJ11_14655	COG2969	positive regulation of protein catabolic process
JKJ11_14660	COG0625	glutathione transferase activity
JKJ11_14665	COG2857	Cytochrome c1
JKJ11_14670	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JKJ11_14675	COG0723	plastoquinol--plastocyanin reductase activity
JKJ11_14680	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JKJ11_14690	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JKJ11_14695	COG3105	Protein conserved in bacteria
JKJ11_14700	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JKJ11_14705	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JKJ11_14710	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JKJ11_14720	COG3150	esterase
JKJ11_14730	COG3151	Protein conserved in bacteria
JKJ11_14735	COG0494	nUDIX hydrolase
JKJ11_14740	COG1538	Outer membrane efflux protein
JKJ11_14745	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JKJ11_14745	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JKJ11_14750	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
JKJ11_14755	COG0842	Transport permease protein
JKJ11_14760	COG1131	(ABC) transporter
JKJ11_14765	COG0659	secondary active sulfate transmembrane transporter activity
JKJ11_14770	COG0288	reversible hydration of carbon dioxide
JKJ11_14785	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JKJ11_14790	COG0508	dehydrogenase complex catalyzes the overall conversion of
JKJ11_14795	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JKJ11_14800	COG2186	Transcriptional regulator
JKJ11_14820	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JKJ11_14825	COG1459	type II secretion system
JKJ11_14835	COG0237	dephospho-CoA kinase activity
JKJ11_14840	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
JKJ11_14850	COG0335	large ribosomal subunit rRNA binding
JKJ11_14855	COG0336	Belongs to the RNA methyltransferase TrmD family
JKJ11_14860	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JKJ11_14865	COG0228	four-way junction DNA binding
JKJ11_14870	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JKJ11_14875	COG4137	Cytochrome C assembly protein
JKJ11_14880	COG4536	flavin adenine dinucleotide binding
JKJ11_14885	COG0646	methionine synthase
JKJ11_14885	COG1410	methionine synthase
JKJ11_14920	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
JKJ11_14930	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JKJ11_14935	COG2066	Belongs to the glutaminase family
JKJ11_14945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JKJ11_14950	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JKJ11_14960	COG1872	DUF167
JKJ11_14965	COG0762	integral membrane protein
JKJ11_14970	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JKJ11_14975	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JKJ11_15095	COG0175	sulfate reduction
JKJ11_15100	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JKJ11_15105	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JKJ11_15150	COG4128	Pfam Zonular occludens toxin
JKJ11_15215	COG0735	belongs to the Fur family
JKJ11_15225	COG0795	lipopolysaccharide-transporting ATPase activity
JKJ11_15230	COG0795	lipopolysaccharide-transporting ATPase activity
JKJ11_15240	COG2927	DNA polymerase III (CHI subunit)
JKJ11_15245	COG0525	valine-tRNA ligase activity
JKJ11_15250	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JKJ11_15255	COG0527	aspartate kinase activity
JKJ11_15280	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JKJ11_15310	COG0432	Pfam Uncharacterised protein family UPF0047
JKJ11_15315	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JKJ11_15340	COG0360	Binds together with S18 to 16S ribosomal RNA
JKJ11_15345	COG1446	asparaginase
JKJ11_15350	COG1047	Peptidyl-prolyl cis-trans
JKJ11_15365	COG2249	NAD(P)H dehydrogenase (quinone) activity
JKJ11_15370	COG0488	(ABC) transporter
JKJ11_15380	COG1279	arginine transmembrane transporter activity
JKJ11_15385	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JKJ11_15390	COG0429	hydrolase of the alpha beta-hydrolase fold
JKJ11_15400	COG3954	Phosphoribulokinase
JKJ11_15405	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JKJ11_15425	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JKJ11_15430	COG0512	Glutamine amidotransferase of anthranilate synthase
JKJ11_15440	COG0180	Tryptophanyl-tRNA synthetase
JKJ11_15445	COG0546	phosphoglycolate phosphatase activity
JKJ11_15450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JKJ11_15455	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JKJ11_15465	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JKJ11_15500	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JKJ11_15510	COG0678	peroxiredoxin activity
JKJ11_15510	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JKJ11_15515	COG0251	oxidation-reduction process
JKJ11_15520	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JKJ11_15520	COG0165	Argininosuccinate lyase
JKJ11_15525	COG0137	argininosuccinate synthase activity
JKJ11_15535	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JKJ11_15540	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JKJ11_15545	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JKJ11_15550	COG1695	Transcriptional regulator
JKJ11_15555	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JKJ11_15560	COG0460	homoserine dehydrogenase
JKJ11_15560	COG0527	aspartate kinase activity
JKJ11_15565	COG0626	cystathionine gamma-synthase activity
JKJ11_15575	COG0281	malic enzyme
JKJ11_15580	COG0254	rRNA binding
JKJ11_15585	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JKJ11_15590	COG1609	Transcriptional regulator
JKJ11_15600	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JKJ11_15605	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JKJ11_15610	COG1575	Belongs to the MenA family. Type 1 subfamily
JKJ11_15615	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JKJ11_15625	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JKJ11_15685	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JKJ11_15690	COG1134	teichoic acid transport
JKJ11_15700	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JKJ11_15715	COG0859	PFAM glycosyl transferase family 9
JKJ11_15720	COG0859	PFAM glycosyl transferase family 9
JKJ11_15740	COG1215	transferase activity, transferring glycosyl groups
JKJ11_15740	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JKJ11_15745	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JKJ11_15750	COG0463	Glycosyl transferase, family 2
JKJ11_15765	COG1519	Transferase
JKJ11_15770	COG3642	lipopolysaccharide core region biosynthetic process
JKJ11_15775	COG0859	PFAM glycosyl transferase family 9
JKJ11_15780	COG0463	Glycosyl transferase, family 2
JKJ11_15785	COG0859	PFAM glycosyl transferase family 9
JKJ11_15790	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JKJ11_15800	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JKJ11_15805	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JKJ11_15810	COG1561	YicC-like family, N-terminal region
JKJ11_15815	COG2252	PERMEase
JKJ11_15820	COG0194	GDP metabolic process
JKJ11_15825	COG1758	RNA polymerase activity
JKJ11_15830	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JKJ11_15835	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JKJ11_15840	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JKJ11_15860	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JKJ11_15880	COG3188	usher protein
JKJ11_15900	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JKJ11_15910	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JKJ11_15915	COG2816	NAD+ diphosphatase activity
JKJ11_15920	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JKJ11_15925	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JKJ11_15940	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JKJ11_15945	COG0081	regulation of translation
JKJ11_15955	COG0250	Participates in transcription elongation, termination and antitermination
JKJ11_15960	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JKJ11_15990	COG1072	(Pantothenic acid kinase))
JKJ11_16000	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JKJ11_16010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JKJ11_16015	COG1217	gtp-binding protein TYPA
JKJ11_16020	COG0174	glutamine synthetase
JKJ11_16030	COG3852	Histidine kinase
JKJ11_16055	COG3078	GTPase activator activity
JKJ11_16065	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JKJ11_16070	COG2937	Belongs to the GPAT DAPAT family
JKJ11_16075	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
JKJ11_16085	COG1580	Controls the rotational direction of flagella during chemotaxis
JKJ11_16090	COG0705	Rhomboid family
JKJ11_16095	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JKJ11_16105	COG2177	Part of the ABC transporter FtsEX involved in
JKJ11_16110	COG2884	Cell division ATP-binding protein ftsE
JKJ11_16115	COG0552	protein localization to endoplasmic reticulum
JKJ11_16115	COG0552	protein localization to endoplasmic reticulum
JKJ11_16120	COG0742	ribosomal rna small subunit methyltransferase
JKJ11_16150	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JKJ11_16155	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JKJ11_16160	COG0459	protein refolding
JKJ11_16165	COG0071	Belongs to the small heat shock protein (HSP20) family
JKJ11_16170	COG0071	Belongs to the small heat shock protein (HSP20) family
JKJ11_16185	COG2205	protein histidine kinase activity
JKJ11_16185	COG0784	Response regulator, receiver
JKJ11_16190	COG2095	MarC family integral membrane protein
JKJ11_16220	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JKJ11_16225	COG1280	lysine exporter protein (LysE YggA)
JKJ11_16235	COG0561	phosphatase activity
JKJ11_16250	COG3148	PFAM DTW domain containing protein
JKJ11_16255	COG1011	Hydrolase
JKJ11_16270	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JKJ11_16275	COG0019	diaminopimelate decarboxylase activity
JKJ11_16285	COG1965	Belongs to the frataxin family
JKJ11_16300	COG1587	Uroporphyrinogen-III synthase
JKJ11_16305	COG2959	enzyme of heme biosynthesis
JKJ11_16310	COG3071	HemY protein
JKJ11_16360	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JKJ11_16375	COG3118	belongs to the thioredoxin family
JKJ11_16385	COG0248	Ppx GppA phosphatase
JKJ11_16390	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JKJ11_16400	COG0514	ATP-dependent DNA helicase (RecQ)
JKJ11_16405	COG2962	Rard protein
JKJ11_16415	COG1280	lysine exporter protein (LysE YggA)
JKJ11_16420	COG0210	DNA helicase
JKJ11_16460	COG0006	proline dipeptidase activity
JKJ11_16470	COG2022	thiamine diphosphate biosynthetic process
JKJ11_16480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JKJ11_16490	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JKJ11_16495	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JKJ11_16500	COG2132	Multicopper oxidase
JKJ11_16545	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JKJ11_16555	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JKJ11_16560	COG0408	coproporphyrinogen oxidase activity
JKJ11_16570	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JKJ11_16580	COG0551	DNA topoisomerase type I activity
JKJ11_16590	COG0758	DNA mediated transformation
JKJ11_16600	COG0242	peptide deformylase activity
JKJ11_16610	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JKJ11_16610	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JKJ11_16615	COG0569	domain protein
JKJ11_16620	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JKJ11_16625	COG1272	protein, Hemolysin III
JKJ11_16630	COG4326	sporulation control protein
JKJ11_16640	COG3084	Protein conserved in bacteria
JKJ11_16650	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JKJ11_16655	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JKJ11_16660	COG0204	Acyl-transferase
JKJ11_16675	COG0606	chelatase, subunit chli
JKJ11_16685	COG3978	acetolactate synthase activity
JKJ11_16695	COG0129	dihydroxy-acid dehydratase activity
JKJ11_16705	COG0583	DNA-binding transcription factor activity
JKJ11_16710	COG2814	Major facilitator Superfamily
JKJ11_16720	COG0765	amino acid transport
JKJ11_16730	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JKJ11_16735	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JKJ11_16740	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JKJ11_16745	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JKJ11_16750	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JKJ11_16755	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JKJ11_16765	COG0356	it plays a direct role in the translocation of protons across the membrane
JKJ11_16770	COG3312	ion transport
JKJ11_16775	COG1475	DNA binding
JKJ11_16780	COG1192	Involved in chromosome partitioning
JKJ11_16785	COG0357	Ribosomal RNA small subunit methyltransferase G
JKJ11_16790	COG0445	tRNA wobble uridine modification
JKJ11_16795	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JKJ11_16800	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JKJ11_16805	COG0706	membrane insertase activity
JKJ11_16810	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JKJ11_16820	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JKJ11_16825	COG1126	abc transporter atp-binding protein
JKJ11_16840	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JKJ11_16840	COG1565	acr, cog1565
JKJ11_16845	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JKJ11_16850	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
JKJ11_16855	COG1845	cytochrome c oxidase, subunit III
JKJ11_16875	COG1612	heme a metabolic process
JKJ11_16880	COG0109	protoheme IX farnesyltransferase activity
JKJ11_16890	COG0765	amino acid transport
JKJ11_16895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ11_16900	COG0765	amino acid transport
JKJ11_16905	COG1126	abc transporter atp-binding protein
JKJ11_16915	COG1288	antiporter activity
JKJ11_16925	COG2186	Transcriptional regulator
JKJ11_16935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JKJ11_16945	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JKJ11_16955	COG0583	DNA-binding transcription factor activity
JKJ11_16960	COG2814	Major facilitator Superfamily
JKJ11_16965	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JKJ11_16975	COG0835	chemotaxis
JKJ11_16975	COG0784	Response regulator, receiver
JKJ11_16980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JKJ11_16995	COG0366	Alpha amylase catalytic
JKJ11_17000	COG3083	sulfuric ester hydrolase activity
JKJ11_17005	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JKJ11_17050	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
JKJ11_17060	COG4145	pantothenate transmembrane transporter activity
JKJ11_17065	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_17070	COG0800	Aldolase
JKJ11_17085	COG3706	GGDEF domain
JKJ11_17090	COG0546	phosphoglycolate phosphatase activity
JKJ11_17095	COG2205	protein histidine kinase activity
JKJ11_17095	COG0784	Response regulator, receiver
JKJ11_17100	COG1858	cytochrome C peroxidase
JKJ11_17105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_17110	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_17120	COG3069	C4-dicarboxylate transmembrane transporter activity
JKJ11_17140	COG3706	GGDEF domain
JKJ11_17145	COG0583	DNA-binding transcription factor activity
JKJ11_17150	COG2197	response regulator
JKJ11_17160	COG0697	spore germination
JKJ11_17165	COG1288	antiporter activity
JKJ11_17170	COG3608	succinylglutamate desuccinylase aspartoacylase
JKJ11_17180	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JKJ11_17190	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JKJ11_17220	COG0714	Associated with various cellular activities
JKJ11_17280	COG3842	ATPase activity
JKJ11_17290	COG1175	transmembrane transport
JKJ11_17295	COG3833	ABC-type maltose transport systems, permease component
JKJ11_17315	COG0366	Alpha amylase catalytic
JKJ11_17355	COG1609	Transcriptional regulator
JKJ11_17360	COG1447	Phosphotransferase system cellobiose-specific component IIA
JKJ11_17365	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JKJ11_17370	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JKJ11_17375	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JKJ11_17410	COG0733	neurotransmitter:sodium symporter activity
JKJ11_17420	COG1794	racemase activity, acting on amino acids and derivatives
JKJ11_17425	COG3706	GGDEF domain
JKJ11_17450	COG2771	luxR family
JKJ11_17450	COG2200	EAL domain
JKJ11_17465	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JKJ11_17480	COG0583	DNA-binding transcription factor activity
JKJ11_17490	COG2897	thiosulfate sulfurtransferase activity
JKJ11_17500	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JKJ11_17505	COG0303	'Molybdopterin
JKJ11_17510	COG0302	gtp cyclohydrolase
JKJ11_17530	COG0038	chloride channel
JKJ11_17535	COG0523	cobalamin synthesis protein
JKJ11_17550	COG0714	Associated with various cellular activities
JKJ11_17570	COG2304	oxidoreductase activity
JKJ11_17590	COG3706	GGDEF domain
JKJ11_17605	COG0641	radical SAM
JKJ11_17615	COG0786	glutamate:sodium symporter activity
JKJ11_17630	COG0625	glutathione transferase activity
JKJ11_17640	COG0110	maltose O-acetyltransferase activity
JKJ11_17645	COG3300	MHYT domain
JKJ11_17645	COG5001	Diguanylate cyclase
JKJ11_17650	COG1869	D-ribose catabolic process
JKJ11_17655	COG1129	ABC transporter
JKJ11_17660	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ11_17670	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_17680	COG1979	alcohol dehydrogenase
JKJ11_17695	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ11_17715	COG1136	(ABC) transporter
JKJ11_17735	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ11_17740	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ11_17745	COG1129	ABC transporter
JKJ11_17755	COG2390	Transcriptional regulator
JKJ11_17760	COG0667	Aldo Keto reductase
JKJ11_17765	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JKJ11_17775	COG1070	Carbohydrate kinase
JKJ11_17780	COG1454	alcohol dehydrogenase
JKJ11_17805	COG3153	acetyltransferase
JKJ11_17840	COG0642	Histidine kinase
JKJ11_17845	COG0745	RESPONSE REGULATOR receiver
JKJ11_17850	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_17860	COG0747	negative chemotaxis
JKJ11_17870	COG0444	Belongs to the ABC transporter superfamily
JKJ11_17875	COG0534	Mate efflux family protein
JKJ11_17885	COG1414	Transcriptional regulator
JKJ11_17895	COG1136	(ABC) transporter
JKJ11_17900	COG0577	efflux transmembrane transporter activity
JKJ11_17915	COG1355	regulation of microtubule-based process
JKJ11_17930	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_17930	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JKJ11_17930	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_17935	COG0383	alpha-mannosidase activity
JKJ11_17940	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_17940	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_17940	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JKJ11_17945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_17965	COG2814	Major facilitator Superfamily
JKJ11_17995	COG3070	regulator of competence-specific genes
JKJ11_18010	COG4175	Glycine betaine
JKJ11_18010	COG3448	diguanylate cyclase activity
JKJ11_18015	COG4176	ABC-type proline glycine betaine transport system permease component
JKJ11_18030	COG0583	DNA-binding transcription factor activity
JKJ11_18055	COG4989	oxidoreductase activity
JKJ11_18060	COG0739	heme binding
JKJ11_18080	COG3829	transcription factor binding
JKJ11_18085	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JKJ11_18100	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JKJ11_18105	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JKJ11_18110	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JKJ11_18120	COG0549	Belongs to the carbamate kinase family
JKJ11_18125	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JKJ11_18130	COG0573	inorganic phosphate transmembrane transporter activity
JKJ11_18140	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JKJ11_18150	COG5002	protein histidine kinase activity
JKJ11_18150	COG2205	protein histidine kinase activity
JKJ11_18150	COG0784	Response regulator, receiver
JKJ11_18155	COG1902	pentaerythritol trinitrate reductase activity
JKJ11_18155	COG0446	pyridine nucleotide-disulphide oxidoreductase
JKJ11_18165	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JKJ11_18190	COG0653	protein targeting
JKJ11_18250	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_18255	COG0456	acetyltransferase
JKJ11_18270	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JKJ11_18275	COG2153	protein acetylation
JKJ11_18280	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JKJ11_18295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JKJ11_18320	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JKJ11_18325	COG3152	Membrane
JKJ11_18340	COG0456	acetyltransferase
JKJ11_18350	COG1683	Conserved Protein
JKJ11_18385	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
JKJ11_18385	COG3408	Glycogen debranching enzyme
JKJ11_18390	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JKJ11_18390	COG3608	succinylglutamate desuccinylase aspartoacylase
JKJ11_18395	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JKJ11_18400	COG2068	MobA-Related Protein
JKJ11_18405	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
JKJ11_18410	COG2080	2 iron, 2 sulfur cluster binding
JKJ11_18410	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JKJ11_18415	COG0402	S-adenosylhomocysteine deaminase activity
JKJ11_18420	COG2252	PERMEase
JKJ11_18425	COG1846	Transcriptional regulator
JKJ11_18430	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JKJ11_18430	COG0493	'glutamate synthase
JKJ11_18435	COG0402	S-adenosylhomocysteine deaminase activity
JKJ11_18440	COG3119	arylsulfatase activity
JKJ11_18445	COG3119	arylsulfatase activity
JKJ11_18450	COG0210	DNA helicase
JKJ11_18460	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_18465	COG0545	Peptidyl-prolyl cis-trans isomerase
JKJ11_18480	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JKJ11_18485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_18490	COG2199	diguanylate cyclase activity
JKJ11_18505	COG0546	phosphoglycolate phosphatase activity
JKJ11_18520	COG0840	transmembrane signaling receptor activity
JKJ11_18525	COG0814	amino acid
JKJ11_18535	COG2824	Alkylphosphonate utilization operon protein PhnA
JKJ11_18540	COG3250	beta-galactosidase activity
JKJ11_18550	COG1024	Enoyl-CoA hydratase
JKJ11_18555	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JKJ11_18560	COG1960	acyl-CoA dehydrogenase activity
JKJ11_18570	COG0183	Belongs to the thiolase family
JKJ11_18580	COG1960	acyl-CoA dehydrogenase activity
JKJ11_18585	COG1024	Enoyl-CoA hydratase
JKJ11_18590	COG1024	Enoyl-CoA hydratase
JKJ11_18600	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_18620	COG2226	methyltransferase
JKJ11_18630	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JKJ11_18660	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JKJ11_18665	COG0346	lactoylglutathione lyase activity
JKJ11_18680	COG1063	alcohol dehydrogenase
JKJ11_18695	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JKJ11_18765	COG3038	cytochrome b561
JKJ11_18770	COG2353	YceI-like domain
JKJ11_18780	COG2116	formate transmembrane transporter activity
JKJ11_18785	COG0583	DNA-binding transcription factor activity
JKJ11_18795	COG3593	DNA synthesis involved in DNA repair
JKJ11_18800	COG0737	Belongs to the 5'-nucleotidase family
JKJ11_18825	COG3132	Protein of unknown function, DUF480
JKJ11_18830	COG2827	Endonuclease containing a URI domain
JKJ11_18855	COG1289	transmembrane transporter activity
JKJ11_18860	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JKJ11_18890	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JKJ11_18925	COG1328	CTP reductase activity
JKJ11_18930	COG0602	queuosine metabolic process
JKJ11_18940	COG4067	protein conserved in archaea
JKJ11_18940	COG0189	ligase activity
JKJ11_18955	COG1492	cobalamin metabolic process
JKJ11_18960	COG0725	ABC transporter, periplasmic molybdate-binding protein
JKJ11_18965	COG4149	molybdate abc transporter
JKJ11_18970	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
JKJ11_18980	COG3706	GGDEF domain
JKJ11_19000	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JKJ11_19005	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JKJ11_19030	COG3140	Belongs to the UPF0181 family
JKJ11_19035	COG0023	Translation Initiation Factor
JKJ11_19050	COG1181	Belongs to the D-alanine--D-alanine ligase family
JKJ11_19055	COG3266	domain, Protein
JKJ11_19060	COG1042	CoA-binding domain protein
JKJ11_19060	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JKJ11_19060	COG0045	succinate-CoA ligase (ADP-forming) activity
JKJ11_19065	COG0583	DNA-binding transcription factor activity
JKJ11_19105	COG5002	protein histidine kinase activity
JKJ11_19105	COG0784	Response regulator, receiver
JKJ11_19105	COG2198	Histidine kinase
JKJ11_19110	COG1879	ABC-type sugar transport system periplasmic component
JKJ11_19115	COG1803	Methylglyoxal synthase
JKJ11_19135	COG1765	OsmC-like protein
JKJ11_19140	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_19140	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_19145	COG0668	transmembrane transport
JKJ11_19155	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JKJ11_19180	COG2205	protein histidine kinase activity
JKJ11_19195	COG2203	Gaf domain
JKJ11_19195	COG3706	GGDEF domain
JKJ11_19195	COG4251	negative regulation of phosphorylation
JKJ11_19195	COG5001	Diguanylate cyclase
JKJ11_19200	COG0516	GMP reductase activity
JKJ11_19205	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JKJ11_19205	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JKJ11_19220	COG1858	cytochrome C peroxidase
JKJ11_19250	COG3097	Belongs to the UPF0267 family
JKJ11_19255	COG0419	ATPase involved in DNA repair
JKJ11_19260	COG0420	3'-5' exonuclease activity
JKJ11_19270	COG2205	protein histidine kinase activity
JKJ11_19275	COG0745	RESPONSE REGULATOR receiver
JKJ11_19295	COG2195	Cleaves the N-terminal amino acid of tripeptides
JKJ11_19315	COG0366	Alpha amylase catalytic
JKJ11_19320	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JKJ11_19330	COG1538	Outer membrane efflux protein
JKJ11_19335	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_19355	COG3530	Putative quorum-sensing-regulated virulence factor
JKJ11_19365	COG3263	regulation of cellular component size
JKJ11_19370	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JKJ11_19375	COG3118	belongs to the thioredoxin family
JKJ11_19380	COG1917	Cupin 2, conserved barrel domain protein
JKJ11_19380	COG2207	Transcriptional regulator
JKJ11_19400	COG0189	ligase activity
JKJ11_19400	COG4067	protein conserved in archaea
JKJ11_19410	COG0189	ligase activity
JKJ11_19415	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JKJ11_19420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JKJ11_19430	COG4181	ATPase activity
JKJ11_19440	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JKJ11_19480	COG4533	DNA binding
JKJ11_19490	COG2050	protein possibly involved in aromatic compounds catabolism
JKJ11_19495	COG4783	chaperone-mediated protein folding
JKJ11_19520	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JKJ11_19525	COG0513	Belongs to the DEAD box helicase family
JKJ11_19530	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
JKJ11_19540	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JKJ11_19545	COG0393	Putative heavy-metal-binding
JKJ11_19590	COG2425	protein containing a von Willebrand factor type A (vWA) domain
JKJ11_19610	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JKJ11_19620	COG0583	DNA-binding transcription factor activity
JKJ11_19635	COG1882	Formate acetyltransferase
JKJ11_19640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ11_19650	COG0513	Belongs to the DEAD box helicase family
JKJ11_19655	COG1742	UPF0060 membrane protein
JKJ11_19660	COG1335	isochorismatase
JKJ11_19665	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JKJ11_19675	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
JKJ11_19680	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JKJ11_19695	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JKJ11_19700	COG1461	Dihydroxyacetone kinase
JKJ11_19705	COG2376	Dihydroxyacetone kinase
JKJ11_19735	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JKJ11_19740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_19740	COG1263	PTS System
JKJ11_19745	COG1609	Transcriptional regulator
JKJ11_19750	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JKJ11_19755	COG1280	lysine exporter protein (LysE YggA)
JKJ11_19765	COG3284	Transcriptional regulator
JKJ11_19775	COG1501	Belongs to the glycosyl hydrolase 31 family
JKJ11_19780	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_19785	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_19810	COG2084	Dehydrogenase
JKJ11_19815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_19820	COG1349	DNA-binding transcription factor activity
JKJ11_19860	COG0826	peptidase U32
JKJ11_19890	COG1960	acyl-CoA dehydrogenase activity
JKJ11_19900	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_19905	COG3384	dioxygenase
JKJ11_19920	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_19930	COG0179	Fumarylacetoacetate (FAA) hydrolase
JKJ11_19940	COG3971	2-oxopent-4-enoate hydratase activity
JKJ11_19950	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_19960	COG1846	Transcriptional regulator
JKJ11_19975	COG1278	Cold shock
JKJ11_19990	COG1017	nitric oxide dioxygenase activity
JKJ11_19990	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JKJ11_19995	COG3604	Transcriptional regulator
JKJ11_20005	COG0519	Catalyzes the synthesis of GMP from XMP
JKJ11_20015	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JKJ11_20025	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_20035	COG1177	transmembrane transport
JKJ11_20040	COG1176	ABC-type spermidine putrescine transport system, permease component I
JKJ11_20045	COG3842	ATPase activity
JKJ11_20050	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JKJ11_20060	COG0174	glutamine synthetase
JKJ11_20065	COG0174	glutamine synthetase
JKJ11_20070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JKJ11_20080	COG4191	Histidine kinase
JKJ11_20090	COG0573	inorganic phosphate transmembrane transporter activity
JKJ11_20100	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JKJ11_20110	COG2850	peptidyl-arginine hydroxylation
JKJ11_20120	COG3366	ferrous iron transmembrane transporter activity
JKJ11_20125	COG0700	Nucleoside recognition
JKJ11_20130	COG0840	transmembrane signaling receptor activity
JKJ11_20135	COG0583	DNA-binding transcription factor activity
JKJ11_20145	COG4172	Belongs to the ABC transporter superfamily
JKJ11_20150	COG4239	(ABC) transporter, permease
JKJ11_20155	COG4174	ABC transporter (Permease)
JKJ11_20160	COG4166	transmembrane transport
JKJ11_20165	COG3706	GGDEF domain
JKJ11_20180	COG2910	NAD(P)H-binding
JKJ11_20185	COG0583	DNA-binding transcription factor activity
JKJ11_20190	COG1472	Belongs to the glycosyl hydrolase 3 family
JKJ11_20195	COG4608	Belongs to the ABC transporter superfamily
JKJ11_20200	COG0444	Belongs to the ABC transporter superfamily
JKJ11_20205	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JKJ11_20220	COG1132	(ABC) transporter
JKJ11_20245	COG1070	Carbohydrate kinase
JKJ11_20250	COG4214	carbohydrate transport
JKJ11_20255	COG1129	ABC transporter
JKJ11_20260	COG4213	ABC transporter substrate-binding protein
JKJ11_20265	COG2115	Belongs to the xylose isomerase family
JKJ11_20270	COG1609	Transcriptional regulator
JKJ11_20270	COG2207	Transcriptional regulator
JKJ11_20280	COG3469	chitinase activity
JKJ11_20285	COG1522	sequence-specific DNA binding
JKJ11_20300	COG1131	(ABC) transporter
JKJ11_20305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JKJ11_20315	COG1881	PFAM PEBP family protein
JKJ11_20325	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JKJ11_20360	COG4533	DNA binding
JKJ11_20365	COG2723	6-phospho-beta-galactosidase activity
JKJ11_20370	COG4409	exo-alpha-(2->6)-sialidase activity
JKJ11_20380	COG1609	Transcriptional regulator
JKJ11_20385	COG2723	6-phospho-beta-galactosidase activity
JKJ11_20400	COG3842	ATPase activity
JKJ11_20405	COG1175	transmembrane transport
JKJ11_20410	COG0395	ABC-type sugar transport system, permease component
JKJ11_20420	COG3291	Pkd domain containing protein
JKJ11_20425	COG1609	Transcriptional regulator
JKJ11_20430	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_20430	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_20435	COG1105	Belongs to the carbohydrate kinase PfkB family
JKJ11_20440	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JKJ11_20440	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_20440	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_20460	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JKJ11_20470	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JKJ11_20475	COG0509	glycine decarboxylation via glycine cleavage system
JKJ11_20490	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JKJ11_20500	COG0800	Aldolase
JKJ11_20510	COG4948	Mandelate Racemase Muconate Lactonizing
JKJ11_20530	COG1414	Transcriptional regulator
JKJ11_20535	COG2211	Major facilitator Superfamily
JKJ11_20540	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JKJ11_20565	COG0583	DNA-binding transcription factor activity
JKJ11_20575	COG1136	(ABC) transporter
JKJ11_20575	COG0577	efflux transmembrane transporter activity
JKJ11_20580	COG1136	(ABC) transporter
JKJ11_20580	COG0577	efflux transmembrane transporter activity
JKJ11_20585	COG0577	efflux transmembrane transporter activity
JKJ11_20600	COG0513	Belongs to the DEAD box helicase family
JKJ11_20610	COG2188	Transcriptional regulator
JKJ11_20620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_20625	COG1397	ADP-ribosylglycohydrolase
JKJ11_20630	COG2211	Major facilitator Superfamily
JKJ11_20645	COG2188	Transcriptional regulator
JKJ11_20655	COG1263	PTS System
JKJ11_20655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_20660	COG0583	DNA-binding transcription factor activity
JKJ11_20685	COG1566	PFAM secretion protein HlyD family protein
JKJ11_20695	COG0583	DNA-binding transcription factor activity
JKJ11_20725	COG1902	pentaerythritol trinitrate reductase activity
JKJ11_20730	COG0346	lactoylglutathione lyase activity
JKJ11_20745	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JKJ11_20750	COG2207	Transcriptional regulator
JKJ11_20755	COG0210	DNA helicase
JKJ11_20765	COG2188	Transcriptional regulator
JKJ11_20770	COG2723	6-phospho-beta-galactosidase activity
JKJ11_20775	COG2197	response regulator
JKJ11_20780	COG3850	Histidine kinase
JKJ11_20795	COG0243	molybdopterin cofactor binding
JKJ11_20815	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
JKJ11_20820	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_20825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_20850	COG5001	Diguanylate cyclase
JKJ11_20850	COG2203	Gaf domain
JKJ11_20850	COG4251	negative regulation of phosphorylation
JKJ11_20850	COG3706	GGDEF domain
JKJ11_20905	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JKJ11_20910	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JKJ11_20910	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JKJ11_20915	COG0583	DNA-binding transcription factor activity
JKJ11_20925	COG2824	Alkylphosphonate utilization operon protein PhnA
JKJ11_20940	COG2514	catechol 2,3-dioxygenase activity
JKJ11_20945	COG0748	coenzyme F420 binding
JKJ11_20950	COG3721	Heme iron utilization protein
JKJ11_20960	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JKJ11_20965	COG0811	peptide transport
JKJ11_20970	COG0848	biopolymer transport protein
JKJ11_20980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JKJ11_20985	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
JKJ11_21020	COG0583	DNA-binding transcription factor activity
JKJ11_21025	COG1620	l-lactate permease
JKJ11_21035	COG1139	Iron-sulfur cluster binding protein
JKJ11_21050	COG3706	GGDEF domain
JKJ11_21065	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JKJ11_21070	COG2723	6-phospho-beta-galactosidase activity
JKJ11_21075	COG1940	carbohydrate kinase activity
JKJ11_21080	COG1940	carbohydrate kinase activity
JKJ11_21085	COG1741	Belongs to the pirin family
JKJ11_21090	COG3123	guanosine phosphorylase activity
JKJ11_21095	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JKJ11_21115	COG0784	Response regulator, receiver
JKJ11_21115	COG5002	protein histidine kinase activity
JKJ11_21120	COG0840	transmembrane signaling receptor activity
JKJ11_21140	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JKJ11_21145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JKJ11_21150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JKJ11_21155	COG1120	ATPase activity
JKJ11_21165	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JKJ11_21200	COG1126	abc transporter atp-binding protein
JKJ11_21205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JKJ11_21210	COG4215	(ABC) transporter
JKJ11_21215	COG4160	amino acid transport
JKJ11_21230	COG2130	NADP-dependent
JKJ11_21235	COG1309	transcriptional regulator
JKJ11_21250	COG0251	oxidation-reduction process
JKJ11_21265	COG2223	nitrite transmembrane transporter activity
JKJ11_21275	COG2376	Dihydroxyacetone kinase
JKJ11_21280	COG1461	Dihydroxyacetone kinase
JKJ11_21290	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_21300	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JKJ11_21315	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
JKJ11_21320	COG0804	urea catabolic process
JKJ11_21325	COG0832	Belongs to the urease beta subunit family
JKJ11_21330	COG0831	urea catabolic process
JKJ11_21365	COG0534	Mate efflux family protein
JKJ11_21400	COG1560	Kdo2-lipid A biosynthetic process
JKJ11_21435	COG5001	Diguanylate cyclase
JKJ11_21435	COG5002	protein histidine kinase activity
JKJ11_21440	COG2205	protein histidine kinase activity
JKJ11_21440	COG0784	Response regulator, receiver
JKJ11_21450	COG3539	Fimbrial protein
JKJ11_21455	COG3188	usher protein
JKJ11_21495	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JKJ11_21510	COG0633	Ferredoxin
JKJ11_21510	COG3217	Mosc domain protein beta barrel domain protein
JKJ11_21515	COG0418	dihydroorotase activity
JKJ11_21550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_21550	COG2190	(PTS) system
JKJ11_21550	COG1263	PTS System
JKJ11_21555	COG1454	alcohol dehydrogenase
JKJ11_21590	COG2154	pterin-4-alpha-carbinolamine dehydratase
JKJ11_21595	COG3186	Phenylalanine-4-hydroxylase
JKJ11_21600	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JKJ11_21605	COG0463	Glycosyl transferase, family 2
JKJ11_21610	COG0586	Pfam SNARE associated Golgi protein
JKJ11_21640	COG0815	Transfers the fatty acyl group on membrane lipoproteins
JKJ11_21660	COG3136	membrane protein required for alginate biosynthesis
JKJ11_21670	COG1609	Transcriptional regulator
JKJ11_21680	COG3842	ATPase activity
JKJ11_21685	COG0395	ABC-type sugar transport system, permease component
JKJ11_21690	COG1175	transmembrane transport
JKJ11_21700	COG0366	Alpha amylase catalytic
JKJ11_21705	COG0438	transferase activity, transferring glycosyl groups
JKJ11_21710	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JKJ11_21720	COG1175	transmembrane transport
JKJ11_21725	COG4208	sulfate ABC transporter
JKJ11_21735	COG1940	carbohydrate kinase activity
JKJ11_21745	COG0438	transferase activity, transferring glycosyl groups
JKJ11_21755	COG4604	ABC transporter, ATP-binding protein
JKJ11_21760	COG4605	iron ion homeostasis
JKJ11_21765	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JKJ11_21770	COG4607	ABC-type enterochelin transport system periplasmic component
JKJ11_21775	COG2188	Transcriptional regulator
JKJ11_21780	COG2354	Protein conserved in bacteria
JKJ11_21800	COG2814	Major facilitator Superfamily
JKJ11_21820	COG0488	(ABC) transporter
JKJ11_21825	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JKJ11_21830	COG1595	DNA-templated transcription, initiation
JKJ11_21850	COG0739	heme binding
JKJ11_21865	COG3314	Sporulation integral membrane protein YlbJ
JKJ11_21880	COG1621	beta-fructofuranosidase activity
JKJ11_21885	COG1263	PTS System
JKJ11_21885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_21890	COG2188	Transcriptional regulator
JKJ11_21900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_21915	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JKJ11_21920	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_21925	COG2957	Belongs to the agmatine deiminase family
JKJ11_21935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JKJ11_21940	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_21945	COG1917	Cupin 2, conserved barrel domain protein
JKJ11_21945	COG1396	sequence-specific DNA binding
JKJ11_21950	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JKJ11_21955	COG0174	glutamine synthetase
JKJ11_21960	COG1757	Na H antiporter
JKJ11_21965	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JKJ11_21980	COG1247	-acetyltransferase
JKJ11_22015	COG4264	IucA IucC family
JKJ11_22020	COG4264	IucA IucC family
JKJ11_22030	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JKJ11_22035	COG1120	ATPase activity
JKJ11_22060	COG0668	transmembrane transport
JKJ11_22075	COG1454	alcohol dehydrogenase
JKJ11_22105	COG0583	DNA-binding transcription factor activity
JKJ11_22110	COG1846	Transcriptional regulator
JKJ11_22115	COG1764	response to oxidative stress
JKJ11_22120	COG0363	glucosamine-6-phosphate deaminase activity
JKJ11_22125	COG0514	ATP-dependent DNA helicase (RecQ)
JKJ11_22165	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JKJ11_22170	COG1228	amidohydrolase
JKJ11_22175	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JKJ11_22180	COG1349	DNA-binding transcription factor activity
JKJ11_22185	COG3722	fumarate hydratase activity
JKJ11_22190	COG0246	Mannitol dehydrogenase
JKJ11_22195	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_22195	COG2213	PTS system mannitol-specific
JKJ11_22200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_22210	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JKJ11_22225	COG0456	acetyltransferase
JKJ11_22240	COG4533	DNA binding
JKJ11_22255	COG4221	oxidoreductase activity
JKJ11_22280	COG2186	Transcriptional regulator
JKJ11_22285	COG3250	beta-galactosidase activity
JKJ11_22295	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_22310	COG0246	Mannitol dehydrogenase
JKJ11_22315	COG1904	glucuronate isomerase
JKJ11_22320	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_22325	COG0800	Aldolase
JKJ11_22370	COG3842	ATPase activity
JKJ11_22375	COG0395	ABC-type sugar transport system, permease component
JKJ11_22380	COG1175	transmembrane transport
JKJ11_22385	COG1653	transport
JKJ11_22390	COG1609	Transcriptional regulator
JKJ11_22395	COG0366	Alpha amylase catalytic
JKJ11_22405	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JKJ11_22410	COG0549	Belongs to the carbamate kinase family
JKJ11_22420	COG1288	antiporter activity
JKJ11_22440	COG1418	mRNA catabolic process
JKJ11_22445	COG0384	phenazine biosynthesis protein PhzF
JKJ11_22460	COG3046	protein related to deoxyribodipyrimidine photolyase
JKJ11_22465	COG0415	Belongs to the DNA photolyase family
JKJ11_22475	COG3706	GGDEF domain
JKJ11_22480	COG3437	response regulator, receiver
JKJ11_22485	COG3437	response regulator, receiver
JKJ11_22505	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JKJ11_22515	COG3706	GGDEF domain
JKJ11_22525	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ11_22535	COG2176	DNA-directed DNA polymerase activity
JKJ11_22540	COG0517	IMP dehydrogenase activity
JKJ11_22545	COG2186	Transcriptional regulator
JKJ11_22550	COG2186	Transcriptional regulator
JKJ11_22565	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_22610	COG1917	Cupin 2, conserved barrel domain protein
JKJ11_22620	COG0800	Aldolase
JKJ11_22625	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ11_22640	COG0657	acetylesterase activity
JKJ11_22640	COG2755	lipolytic protein G-D-S-L family
JKJ11_22655	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_22660	COG1414	Transcriptional regulator
JKJ11_22680	COG1609	Transcriptional regulator
JKJ11_22685	COG1902	pentaerythritol trinitrate reductase activity
JKJ11_22690	COG0583	DNA-binding transcription factor activity
JKJ11_22700	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JKJ11_22730	COG1309	transcriptional regulator
JKJ11_22735	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JKJ11_22740	COG1640	4-alpha-glucanotransferase
JKJ11_22745	COG0058	SHG alpha-glucan phosphorylase activity
JKJ11_22770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_22800	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_22800	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_22805	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_22810	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_22815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JKJ11_22830	COG2855	membrane
JKJ11_22855	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_22860	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_22865	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_22875	COG0561	phosphatase activity
JKJ11_22890	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JKJ11_22895	COG1414	Transcriptional regulator
JKJ11_22900	COG3623	hexulose-6-phosphate isomerase
JKJ11_22920	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_22925	COG0730	response to heat
JKJ11_22930	COG0280	phosphate acetyltransferase
JKJ11_22935	COG1414	Transcriptional regulator
JKJ11_22940	COG1357	PFAM Pentapeptide repeats (8 copies)
JKJ11_22945	COG3639	organic phosphonate transmembrane transporter activity
JKJ11_22970	COG2814	Major facilitator Superfamily
JKJ11_22980	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_22980	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JKJ11_22985	COG4533	DNA binding
JKJ11_22995	COG0110	maltose O-acetyltransferase activity
JKJ11_23005	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JKJ11_23015	COG0583	DNA-binding transcription factor activity
JKJ11_23025	COG0672	)-iron permease
JKJ11_23050	COG1136	(ABC) transporter
JKJ11_23050	COG0577	efflux transmembrane transporter activity
JKJ11_23055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JKJ11_23065	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JKJ11_23080	COG0738	Major facilitator superfamily
JKJ11_23085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JKJ11_23095	COG1349	DNA-binding transcription factor activity
JKJ11_23100	COG5380	lipid catabolic process
JKJ11_23105	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JKJ11_23110	COG3568	Endonuclease Exonuclease Phosphatase
JKJ11_23120	COG3634	alkyl hydroperoxide reductase activity
JKJ11_23140	COG0583	DNA-binding transcription factor activity
JKJ11_23165	COG0519	Catalyzes the synthesis of GMP from XMP
JKJ11_23170	COG2205	protein histidine kinase activity
JKJ11_23185	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JKJ11_23195	COG3247	response to pH
JKJ11_23200	COG0583	DNA-binding transcription factor activity
JKJ11_23220	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JKJ11_23225	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
JKJ11_23230	COG3454	Phosphonate metabolism
JKJ11_23235	COG4778	phosphonate C-P lyase system protein PhnL
JKJ11_23240	COG4107	phosphonate C-P lyase system protein PhnK
JKJ11_23245	COG3627	carbon phosphorus lyase activity
JKJ11_23250	COG3626	phosphonate metabolism
JKJ11_23255	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
JKJ11_23260	COG3624	Phosphonate C-P lyase system protein PhnG
JKJ11_23265	COG2188	Transcriptional regulator
JKJ11_23285	COG5002	protein histidine kinase activity
JKJ11_23285	COG2205	protein histidine kinase activity
JKJ11_23285	COG0784	Response regulator, receiver
JKJ11_23310	COG0583	DNA-binding transcription factor activity
JKJ11_23315	COG2015	COG2015, Alkyl sulfatase and related hydrolases
JKJ11_23320	COG0443	Heat shock 70 kDa protein
JKJ11_23325	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JKJ11_23335	COG3623	hexulose-6-phosphate isomerase
JKJ11_23340	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JKJ11_23345	COG0561	phosphatase activity
JKJ11_23380	COG0561	phosphatase activity
JKJ11_23400	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JKJ11_23425	COG1444	tRNA N-acetyltransferase activity
JKJ11_23470	COG2084	Dehydrogenase
JKJ11_23485	COG0786	glutamate:sodium symporter activity
JKJ11_23515	COG0259	pyridoxamine-phosphate oxidase activity
JKJ11_23550	COG3842	ATPase activity
JKJ11_23565	COG0387	Pfam Sodium calcium exchanger
JKJ11_23570	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_23575	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JKJ11_23590	COG1447	Phosphotransferase system cellobiose-specific component IIA
JKJ11_23600	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JKJ11_23605	COG2723	6-phospho-beta-galactosidase activity
JKJ11_23610	COG1609	Transcriptional regulator
JKJ11_23615	COG0129	dihydroxy-acid dehydratase activity
JKJ11_23620	COG3265	gluconokinase activity
JKJ11_23625	COG2723	6-phospho-beta-galactosidase activity
JKJ11_23640	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JKJ11_23645	COG2015	COG2015, Alkyl sulfatase and related hydrolases
JKJ11_23650	COG4890	Cyd operon protein YbgT
JKJ11_23655	COG1294	oxidase, subunit
JKJ11_23660	COG1271	oxidase subunit
JKJ11_23675	COG3220	belongs to the UPF0276 family
JKJ11_23690	COG1172	Belongs to the binding-protein-dependent transport system permease family
JKJ11_23695	COG1129	ABC transporter
JKJ11_23700	COG1070	Carbohydrate kinase
JKJ11_23705	COG1063	alcohol dehydrogenase
JKJ11_23720	COG0656	L-ascorbic acid biosynthetic process
JKJ11_23725	COG1349	DNA-binding transcription factor activity
JKJ11_23750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_23765	COG1522	sequence-specific DNA binding
JKJ11_23775	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JKJ11_23785	COG1162	GTPase activity
JKJ11_23825	COG1538	Outer membrane efflux protein
JKJ11_23845	COG3710	Transcriptional regulator
JKJ11_23860	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_23865	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_23895	COG3710	Transcriptional regulator
JKJ11_23905	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JKJ11_23920	COG2985	domain, Protein
JKJ11_23925	COG0076	glutamate decarboxylase activity
JKJ11_23930	COG1566	PFAM secretion protein HlyD family protein
JKJ11_23970	COG1999	signal sequence binding
JKJ11_23985	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JKJ11_23995	COG0625	glutathione transferase activity
JKJ11_24005	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
JKJ11_24015	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JKJ11_24050	COG4386	tail sheath protein
JKJ11_24050	COG4386	tail sheath protein
JKJ11_24090	COG4695	Portal protein
JKJ11_24100	COG3772	lysozyme
JKJ11_24145	COG4228	DNA circulation
JKJ11_24210	COG4974	Belongs to the 'phage' integrase family
JKJ11_24215	COG1132	(ABC) transporter
JKJ11_24225	COG4628	conserved protein (DUF2132)
JKJ11_24245	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JKJ11_24265	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_24305	COG5002	protein histidine kinase activity
JKJ11_24340	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JKJ11_24350	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JKJ11_24360	COG0583	DNA-binding transcription factor activity
JKJ11_24380	COG0625	glutathione transferase activity
JKJ11_24390	COG0783	Belongs to the Dps family
JKJ11_24420	COG0531	amino acid
JKJ11_24425	COG2731	YhcH YjgK YiaL family protein
JKJ11_24430	COG3250	beta-galactosidase activity
JKJ11_24435	COG1609	Transcriptional regulator
JKJ11_24445	COG0583	DNA-binding transcription factor activity
JKJ11_24465	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JKJ11_24485	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JKJ11_24505	COG0471	metal ion transport
JKJ11_24515	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JKJ11_24530	COG0583	DNA-binding transcription factor activity
JKJ11_24570	COG0842	Transport permease protein
JKJ11_24575	COG1131	(ABC) transporter
JKJ11_24585	COG0739	heme binding
JKJ11_24595	COG0437	4 iron, 4 sulfur cluster binding
JKJ11_24600	COG0348	domain, Protein
JKJ11_24630	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JKJ11_24635	COG0251	oxidation-reduction process
JKJ11_24640	COG0006	proline dipeptidase activity
JKJ11_24660	COG2964	Protein conserved in bacteria
JKJ11_24665	COG0006	proline dipeptidase activity
JKJ11_24675	COG1473	amidohydrolase
JKJ11_24680	COG2873	o-acetylhomoserine
JKJ11_24685	COG1522	sequence-specific DNA binding
JKJ11_24700	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JKJ11_24710	COG2358	TRAP transporter, solute receptor (TAXI family
JKJ11_24715	COG0583	DNA-binding transcription factor activity
JKJ11_24720	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JKJ11_24720	COG0517	IMP dehydrogenase activity
JKJ11_24725	COG3730	PTS system glucitol sorbitol-specific
JKJ11_24740	COG1028	Short-chain dehydrogenase reductase Sdr
JKJ11_24750	COG1349	DNA-binding transcription factor activity
JKJ11_24755	COG3730	PTS system glucitol sorbitol-specific
JKJ11_24780	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JKJ11_24785	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
JKJ11_24790	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
JKJ11_24795	COG1737	Transcriptional regulator
JKJ11_24800	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JKJ11_24805	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JKJ11_24810	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
JKJ11_24815	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JKJ11_24825	COG1940	carbohydrate kinase activity
JKJ11_24830	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JKJ11_24845	COG1234	tRNA 3'-trailer cleavage
JKJ11_24925	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JKJ11_24930	COG4771	TonB-dependent receptor
JKJ11_24935	COG0583	DNA-binding transcription factor activity
JKJ11_24945	COG2814	Major facilitator Superfamily
JKJ11_24950	COG1309	transcriptional regulator
JKJ11_24955	COG0589	response to stress
JKJ11_24970	COG0625	glutathione transferase activity
JKJ11_25015	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_25015	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_25015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_25020	COG2188	Transcriptional regulator
JKJ11_25025	COG1882	Formate acetyltransferase
JKJ11_25030	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ11_25040	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JKJ11_25045	COG0612	Peptidase, M16
JKJ11_25050	COG0071	Belongs to the small heat shock protein (HSP20) family
JKJ11_25055	COG0443	Heat shock 70 kDa protein
JKJ11_25060	COG0484	heat shock protein binding
JKJ11_25070	COG0786	glutamate:sodium symporter activity
JKJ11_25075	COG0668	transmembrane transport
JKJ11_25080	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JKJ11_25085	COG0243	molybdopterin cofactor binding
JKJ11_25090	COG3005	denitrification pathway
JKJ11_25095	COG1566	PFAM secretion protein HlyD family protein
JKJ11_25115	COG0813	purine-nucleoside phosphorylase activity
JKJ11_25120	COG3272	Protein of unknown function (DUF1722)
JKJ11_25125	COG0789	Transcriptional regulator
JKJ11_25130	COG0415	Belongs to the DNA photolyase family
JKJ11_25135	COG1376	ErfK ybiS ycfS ynhG family protein
JKJ11_25135	COG1388	LysM domain
JKJ11_25145	COG0513	Belongs to the DEAD box helicase family
JKJ11_25155	COG0573	inorganic phosphate transmembrane transporter activity
JKJ11_25160	COG0581	inorganic phosphate transmembrane transporter activity
JKJ11_25165	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JKJ11_25175	COG1011	Hydrolase
JKJ11_25185	COG3278	Belongs to the heme-copper respiratory oxidase family
JKJ11_25205	COG3104	oligopeptide transport
JKJ11_25210	COG3604	Transcriptional regulator
JKJ11_25230	COG0446	pyridine nucleotide-disulphide oxidoreductase
JKJ11_25235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JKJ11_25295	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JKJ11_25315	COG0300	oxidoreductase activity
JKJ11_25325	COG0383	alpha-mannosidase activity
JKJ11_25330	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_25330	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JKJ11_25330	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_25335	COG2188	Transcriptional regulator
JKJ11_25345	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JKJ11_25350	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JKJ11_25355	COG1840	ABC-type Fe3 transport system, periplasmic component
JKJ11_25360	COG3842	ATPase activity
JKJ11_25400	COG2814	Major facilitator Superfamily
JKJ11_25405	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JKJ11_25430	COG0753	catalase activity
JKJ11_25440	COG2211	Major facilitator Superfamily
JKJ11_25445	COG1486	melibiose metabolic process
JKJ11_25450	COG2169	Transcriptional regulator
JKJ11_25465	COG0402	S-adenosylhomocysteine deaminase activity
JKJ11_25475	COG0431	NADPH-dependent FMN reductase
JKJ11_25475	COG1053	succinate dehydrogenase
JKJ11_25475	COG3976	FMN-binding domain protein
JKJ11_25485	COG1902	pentaerythritol trinitrate reductase activity
JKJ11_25495	COG4172	Belongs to the ABC transporter superfamily
JKJ11_25500	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JKJ11_25505	COG2988	succinylglutamate desuccinylase activity
JKJ11_25510	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JKJ11_25520	COG0523	cobalamin synthesis protein
JKJ11_25525	COG4451	ribulose bisphosphate carboxylase, small
JKJ11_25525	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JKJ11_25530	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JKJ11_25545	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JKJ11_25550	COG1121	(ABC) transporter
JKJ11_25560	COG3153	acetyltransferase
JKJ11_25570	COG0583	DNA-binding transcription factor activity
JKJ11_25575	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_25580	COG3037	sugar-specific permease SgaT UlaA
JKJ11_25610	COG3023	N-Acetylmuramoyl-L-alanine amidase
JKJ11_25630	COG1349	DNA-binding transcription factor activity
JKJ11_25635	COG1882	Formate acetyltransferase
JKJ11_25640	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JKJ11_25650	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JKJ11_25655	COG1834	amidinotransferase
JKJ11_25675	COG0579	oxidoreductase
JKJ11_25690	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JKJ11_25705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JKJ11_25725	COG2264	protein methyltransferase activity
JKJ11_25740	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
JKJ11_25775	COG1067	ATP-dependent peptidase activity
JKJ11_25785	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JKJ11_25795	COG2140	Oxalate decarboxylase
JKJ11_25800	COG2942	2-epimerase
JKJ11_25805	COG3716	PTS system mannose fructose sorbose family IID component
JKJ11_25810	COG3715	PTS system
JKJ11_25815	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JKJ11_25815	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JKJ11_25830	COG1609	Transcriptional regulator
JKJ11_25850	COG0019	diaminopimelate decarboxylase activity
JKJ11_25855	COG0405	Gamma-glutamyltransferase
JKJ11_25865	COG3122	Protein conserved in bacteria
JKJ11_25875	COG0010	Belongs to the arginase family
JKJ11_25880	COG1166	arginine decarboxylase activity
JKJ11_25885	COG3284	Transcriptional regulator
JKJ11_25890	COG1012	belongs to the aldehyde dehydrogenase family
JKJ11_25910	COG1278	Cold shock
JKJ11_25915	COG0402	S-adenosylhomocysteine deaminase activity
JKJ11_25920	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JKJ11_25925	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JKJ11_25930	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JKJ11_25935	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
JKJ11_25940	COG3397	chitin binding
JKJ11_25945	COG0133	tryptophan synthase activity
JKJ11_25950	COG2986	histidine ammonia-lyase
JKJ11_25955	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JKJ11_25960	COG0010	Belongs to the arginase family
JKJ11_25965	COG1228	amidohydrolase
JKJ11_25980	COG0179	Fumarylacetoacetate (FAA) hydrolase
JKJ11_25990	COG0583	DNA-binding transcription factor activity