locus-tag class description J4N38_00005 PF00308 Bacterial dnaA protein J4N38_00005 PF08299 Bacterial dnaA protein helix-turn-helix J4N38_00005 PF11638 DnaA N-terminal domain J4N38_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4N38_00010 PF02767 DNA polymerase III beta subunit, central domain J4N38_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4N38_00015 PF02463 RecF/RecN/SMC N terminal domain J4N38_00020 PF00204 DNA gyrase B J4N38_00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4N38_00020 PF18053 DNA gyrase B subunit insert domain J4N38_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_00020 PF01751 Toprim domain J4N38_00025 PF00011 Hsp20/alpha crystallin family J4N38_00030 PF00155 Aminotransferase class I and II J4N38_00035 PF05746 DALR anticodon binding domain J4N38_00035 PF02092 Glycyl-tRNA synthetase beta subunit J4N38_00040 PF02091 Glycyl-tRNA synthetase alpha subunit J4N38_00045 PF01169 Uncharacterized protein family UPF0016 J4N38_00055 PF01206 Sulfurtransferase TusA J4N38_00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_00065 PF03466 LysR substrate binding domain J4N38_00070 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_00070 PF00107 Zinc-binding dehydrogenase J4N38_00075 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_00075 PF00585 C-terminal regulatory domain of Threonine dehydratase J4N38_00080 PF00920 Dehydratase family J4N38_00085 PF01063 Amino-transferase class IV J4N38_00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_00095 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_00100 PF01078 Magnesium chelatase, subunit ChlI J4N38_00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4N38_00120 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_00120 PF00589 Phage integrase family J4N38_00135 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_00140 PF04851 Type III restriction enzyme, res subunit J4N38_00205 PF01553 Acyltransferase J4N38_00210 PF01323 DSBA-like thioredoxin domain J4N38_00215 PF01636 Phosphotransferase enzyme family J4N38_00220 PF13746 4Fe-4S dicluster domain J4N38_00220 PF12801 4Fe-4S binding domain J4N38_00220 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4N38_00225 PF06288 Protein of unknown function (DUF1040) J4N38_00235 PF07070 SpoOM protein J4N38_00240 PF03006 Haemolysin-III related J4N38_00250 PF02386 Cation transport protein J4N38_00255 PF02080 TrkA-C domain J4N38_00255 PF02254 TrkA-N domain J4N38_00260 PF01189 16S rRNA methyltransferase RsmB/F J4N38_00260 PF01029 NusB family J4N38_00265 PF02911 Formyl transferase, C-terminal domain J4N38_00265 PF00551 Formyl transferase J4N38_00270 PF01327 Polypeptide deformylase J4N38_00275 PF02481 DNA recombination-mediator protein A J4N38_00275 PF17782 DprA winged helix domain J4N38_00280 PF04361 Protein of unknown function (DUF494) J4N38_00285 PF01396 Topoisomerase DNA binding C4 zinc finger J4N38_00290 PF02222 ATP-grasp domain J4N38_00290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4N38_00295 PF00731 AIR carboxylase J4N38_00300 PF01300 Telomere recombination J4N38_00305 PF01218 Coproporphyrinogen III oxidase J4N38_00310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4N38_00310 PF01488 Shikimate / quinate 5-dehydrogenase J4N38_00310 PF08501 Shikimate dehydrogenase substrate binding domain J4N38_00315 PF07369 Protein of unknown function (DUF1488) J4N38_00320 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_00385 PF00962 Adenosine/AMP deaminase J4N38_00390 PF13188 PAS domain J4N38_00390 PF03707 Bacterial signalling protein N terminal repeat J4N38_00390 PF00563 EAL domain J4N38_00390 PF00990 Diguanylate cyclase, GGDEF domain J4N38_00395 PF02954 Bacterial regulatory protein, Fis family J4N38_00395 PF00072 Response regulator receiver domain J4N38_00395 PF00158 Sigma-54 interaction domain J4N38_00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_00400 PF00512 His Kinase A (phospho-acceptor) domain J4N38_00400 PF00989 PAS fold J4N38_00405 PF00120 Glutamine synthetase, catalytic domain J4N38_00405 PF03951 Glutamine synthetase, beta-Grasp domain J4N38_00410 PF00679 Elongation factor G C-terminus J4N38_00410 PF00009 Elongation factor Tu GTP binding domain J4N38_00410 PF03144 Elongation factor Tu domain 2 J4N38_00425 PF03631 Virulence factor BrkB J4N38_00430 PF02580 D-Tyr-tRNA(Tyr) deacylase J4N38_00435 PF00583 Acetyltransferase (GNAT) family J4N38_00435 PF09500 Putative thioesterase (yiiD_Cterm) J4N38_00445 PF01293 Phosphoenolpyruvate carboxykinase J4N38_00450 PF01430 Hsp33 protein J4N38_00455 PF01479 S4 domain J4N38_00460 PF11356 Type II secretion system protein C J4N38_00465 PF00263 Bacterial type II and III secretion system protein J4N38_00465 PF03958 Bacterial type II/III secretion system short domain J4N38_00470 PF00437 Type II/IV secretion system protein J4N38_00475 PF00482 Type II secretion system (T2SS), protein F J4N38_00480 PF07963 Prokaryotic N-terminal methylation motif J4N38_00480 PF08334 Type II secretion system (T2SS), protein G J4N38_00485 PF12019 Type II transport protein GspH J4N38_00490 PF07963 Prokaryotic N-terminal methylation motif J4N38_00490 PF02501 Type II secretion system (T2SS), protein I J4N38_00495 PF07963 Prokaryotic N-terminal methylation motif J4N38_00495 PF11612 Type II secretion system (T2SS), protein J J4N38_00500 PF03934 Type II secretion system (T2SS), protein K J4N38_00505 PF05134 Type II secretion system (T2SS), protein L J4N38_00505 PF12693 GspL periplasmic domain J4N38_00510 PF04612 Type II secretion system (T2SS), protein M J4N38_00515 PF01203 Type II secretion system (T2SS), protein N J4N38_00520 PF00672 HAMP domain J4N38_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_00520 PF00512 His Kinase A (phospho-acceptor) domain J4N38_00525 PF00072 Response regulator receiver domain J4N38_00525 PF00486 Transcriptional regulatory protein, C terminal J4N38_00530 PF03449 Transcription elongation factor, N-terminal J4N38_00530 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_00540 PF09371 Tex-like protein N-terminal domain J4N38_00540 PF00575 S1 RNA binding domain J4N38_00540 PF17674 HHH domain J4N38_00540 PF16921 Tex protein YqgF-like domain J4N38_00550 PF00561 alpha/beta hydrolase fold J4N38_00555 PF00156 Phosphoribosyl transferase domain J4N38_00560 PF01521 Iron-sulphur cluster biosynthesis J4N38_00560 PF01106 NifU-like domain J4N38_00565 PF00293 NUDIX domain J4N38_00570 PF00459 Inositol monophosphatase family J4N38_00575 PF00156 Phosphoribosyl transferase domain J4N38_00580 PF01138 3' exoribonuclease family, domain 1 J4N38_00580 PF03725 3' exoribonuclease family, domain 2 J4N38_00585 PF08340 Domain of unknown function (DUF1732) J4N38_00585 PF03755 YicC-like family, N-terminal region J4N38_00590 PF00860 Permease family J4N38_00595 PF00625 Guanylate kinase J4N38_00600 PF01192 RNA polymerase Rpb6 J4N38_00605 PF02824 TGS domain J4N38_00605 PF04607 Region found in RelA / SpoT proteins J4N38_00605 PF13291 ACT domain J4N38_00610 PF12105 SpoU, rRNA methylase, C-terminal J4N38_00610 PF00588 SpoU rRNA Methylase family J4N38_00615 PF00270 DEAD/DEAH box helicase J4N38_00615 PF00271 Helicase conserved C-terminal domain J4N38_00615 PF17191 RecG wedge domain J4N38_00620 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N38_00625 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N38_00630 PF00440 Bacterial regulatory proteins, tetR family J4N38_00635 PF02441 Flavoprotein J4N38_00635 PF04127 DNA / pantothenate metabolism flavoprotein J4N38_00640 PF04002 RadC-like JAB domain J4N38_00645 PF00830 Ribosomal L28 family J4N38_00650 PF00471 Ribosomal protein L33 J4N38_00660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4N38_00660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4N38_00660 PF06827 Zinc finger found in FPG and IleRS J4N38_00665 PF01467 Cytidylyltransferase-like J4N38_00670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_00675 PF00535 Glycosyl transferase family 2 J4N38_00680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_00690 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_00690 PF00175 Oxidoreductase NAD-binding domain J4N38_00690 PF00970 Oxidoreductase FAD-binding domain J4N38_00695 PF00483 Nucleotidyl transferase J4N38_00700 PF16363 GDP-mannose 4,6 dehydratase J4N38_00705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_00710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4N38_00735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4N38_00735 PF00534 Glycosyl transferases group 1 J4N38_00740 PF04488 Glycosyltransferase sugar-binding region containing DXD motif J4N38_00750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_00755 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_00755 PF12464 Maltose acetyltransferase J4N38_00755 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_00765 PF04932 O-Antigen ligase J4N38_00770 PF00534 Glycosyl transferases group 1 J4N38_00775 PF01370 NAD dependent epimerase/dehydratase family J4N38_00780 PF16363 GDP-mannose 4,6 dehydratase J4N38_00785 PF00483 Nucleotidyl transferase J4N38_00790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4N38_00795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_00810 PF00664 ABC transporter transmembrane region J4N38_00810 PF00005 ABC transporter J4N38_00815 PF02719 Polysaccharide biosynthesis protein J4N38_00820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_00825 PF02350 UDP-N-acetylglucosamine 2-epimerase J4N38_00830 PF08666 SAF domain J4N38_00830 PF03102 NeuB family J4N38_00845 PF00483 Nucleotidyl transferase J4N38_00850 PF02348 Cytidylyltransferase J4N38_00885 PF00535 Glycosyl transferase family 2 J4N38_00900 PF02397 Bacterial sugar transferase J4N38_00905 PF13091 PLD-like domain J4N38_00910 PF03099 Biotin/lipoate A/B protein ligase family J4N38_00910 PF08279 HTH domain J4N38_00910 PF02237 Biotin protein ligase C terminal domain J4N38_00915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4N38_00915 PF01565 FAD binding domain J4N38_00925 PF00455 DeoR C terminal sensor domain J4N38_00925 PF08220 DeoR-like helix-turn-helix domain J4N38_00940 PF00166 Chaperonin 10 Kd subunit J4N38_00945 PF00118 TCP-1/cpn60 chaperonin family J4N38_00950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_00950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_00950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_00955 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4N38_00960 PF06005 Cell division protein ZapB J4N38_00965 PF02219 Methylenetetrahydrofolate reductase J4N38_00970 PF00742 Homoserine dehydrogenase J4N38_00970 PF03447 Homoserine dehydrogenase, NAD binding domain J4N38_00970 PF00696 Amino acid kinase family J4N38_00975 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N38_00980 PF01340 Met Apo-repressor, MetJ J4N38_00985 PF03949 Malic enzyme, NAD binding domain J4N38_00985 PF00390 Malic enzyme, N-terminal domain J4N38_00990 PF01197 Ribosomal protein L31 J4N38_00995 PF00270 DEAD/DEAH box helicase J4N38_00995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4N38_00995 PF18074 Primosomal protein N C-terminal domain J4N38_00995 PF17764 3′ DNA-binding domain (3′BD) J4N38_00995 PF00271 Helicase conserved C-terminal domain J4N38_01000 PF00356 Bacterial regulatory proteins, lacI family J4N38_01005 PF05036 Sporulation related domain J4N38_01010 PF00227 Proteasome subunit J4N38_01015 PF07724 AAA domain (Cdc48 subfamily) J4N38_01015 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_01020 PF01609 Transposase DDE domain J4N38_01020 PF13006 Insertion element 4 transposase N-terminal J4N38_01025 PF02313 Fumarate reductase subunit D J4N38_01030 PF02300 Fumarate reductase subunit C J4N38_01035 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N38_01035 PF13183 4Fe-4S dicluster domain J4N38_01040 PF00890 FAD binding domain J4N38_01040 PF02910 Fumarate reductase flavoprotein C-term J4N38_01045 PF00152 tRNA synthetases class II (D, K and N) J4N38_01050 PF06082 Exopolysaccharide biosynthesis protein YbjH J4N38_01055 PF06251 Capsule biosynthesis GfcC J4N38_01060 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF J4N38_01085 PF00581 Rhodanese-like domain J4N38_01090 PF02556 Preprotein translocase subunit SecB J4N38_01095 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4N38_01095 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4N38_01100 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_01100 PF06426 Serine acetyltransferase, N-terminal J4N38_01105 PF10400 Virulence activator alpha C-term J4N38_01105 PF03551 Transcriptional regulator PadR-like family J4N38_01110 PF00311 Phosphoenolpyruvate carboxylase J4N38_01115 PF03167 Uracil DNA glycosylase superfamily J4N38_01120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_01125 PF04222 Protein of unknown function (DUF416) J4N38_01130 PF01595 Cyclin M transmembrane N-terminal domain J4N38_01130 PF00571 CBS domain J4N38_01135 PF00216 Bacterial DNA-binding protein J4N38_01145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4N38_01145 PF02844 Phosphoribosylglycinamide synthetase, N domain J4N38_01145 PF02843 Phosphoribosylglycinamide synthetase, C domain J4N38_01150 PF01808 AICARFT/IMPCHase bienzyme J4N38_01150 PF02142 MGS-like domain J4N38_01155 PF13411 MerR HTH family regulatory protein J4N38_01160 PF00990 Diguanylate cyclase, GGDEF domain J4N38_01160 PF08448 PAS fold J4N38_01165 PF02954 Bacterial regulatory protein, Fis family J4N38_01170 PF01207 Dihydrouridine synthase (Dus) J4N38_01180 PF02785 Biotin carboxylase C-terminal domain J4N38_01180 PF00289 Biotin carboxylase, N-terminal domain J4N38_01180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N38_01185 PF00364 Biotin-requiring enzyme J4N38_01190 PF01220 Dehydroquinase class II J4N38_01195 PF00501 AMP-binding enzyme J4N38_01195 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N38_01195 PF13193 AMP-binding enzyme C-terminal domain J4N38_01210 PF12832 MFS_1 like family J4N38_01215 PF00072 Response regulator receiver domain J4N38_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_01215 PF09308 LuxQ, periplasmic J4N38_01215 PF00512 His Kinase A (phospho-acceptor) domain J4N38_01220 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_01250 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4N38_01255 PF02357 Transcription termination factor nusG J4N38_01255 PF00467 KOW motif J4N38_01260 PF00298 Ribosomal protein L11, RNA binding domain J4N38_01260 PF03946 Ribosomal protein L11, N-terminal domain J4N38_01265 PF00687 Ribosomal protein L1p/L10e family J4N38_01270 PF00466 Ribosomal protein L10 J4N38_01275 PF00542 Ribosomal protein L7/L12 C-terminal domain J4N38_01275 PF16320 Ribosomal protein L7/L12 dimerisation domain J4N38_01280 PF10385 RNA polymerase beta subunit external 1 domain J4N38_01280 PF00562 RNA polymerase Rpb2, domain 6 J4N38_01280 PF04563 RNA polymerase beta subunit J4N38_01280 PF04561 RNA polymerase Rpb2, domain 2 J4N38_01280 PF04565 RNA polymerase Rpb2, domain 3 J4N38_01280 PF04560 RNA polymerase Rpb2, domain 7 J4N38_01285 PF04998 RNA polymerase Rpb1, domain 5 J4N38_01285 PF05000 RNA polymerase Rpb1, domain 4 J4N38_01285 PF00623 RNA polymerase Rpb1, domain 2 J4N38_01285 PF04997 RNA polymerase Rpb1, domain 1 J4N38_01285 PF04983 RNA polymerase Rpb1, domain 3 J4N38_01290 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N38_01295 PF10415 Fumarase C C-terminus J4N38_01295 PF00206 Lyase J4N38_01300 PF04186 FxsA cytoplasmic membrane protein J4N38_01370 PF00117 Glutamine amidotransferase class-I J4N38_01375 PF00202 Aminotransferase class-III J4N38_01380 PF04958 Arginine N-succinyltransferase beta subunit J4N38_01385 PF00171 Aldehyde dehydrogenase family J4N38_01395 PF02666 Phosphatidylserine decarboxylase J4N38_01400 PF03193 RsgA GTPase J4N38_01405 PF00929 Exonuclease J4N38_01455 PF08331 Domain of unknown function (DUF1730) J4N38_01460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4N38_01465 PF01520 N-acetylmuramoyl-L-alanine amidase J4N38_01470 PF08676 MutL C terminal dimerisation domain J4N38_01470 PF01119 DNA mismatch repair protein, C-terminal domain J4N38_01480 PF17209 Hfq protein J4N38_01485 PF16360 GTP-binding GTPase Middle Region J4N38_01485 PF13167 GTP-binding GTPase N-terminal J4N38_01485 PF01926 50S ribosome-binding GTPase J4N38_01490 PF01145 SPFH domain / Band 7 family J4N38_01490 PF12221 Bacterial membrane protein N terminal J4N38_01495 PF01145 SPFH domain / Band 7 family J4N38_01500 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J4N38_01505 PF04102 SlyX J4N38_01515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_01515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_01520 PF13309 HTH domain J4N38_01520 PF08348 YheO-like PAS domain J4N38_01525 PF02635 DsrE/DsrF-like family J4N38_01530 PF02635 DsrE/DsrF-like family J4N38_01535 PF04077 DsrH like protein J4N38_01540 PF00164 Ribosomal protein S12/S23 J4N38_01545 PF00177 Ribosomal protein S7p/S5e J4N38_01550 PF00679 Elongation factor G C-terminus J4N38_01550 PF14492 Elongation Factor G, domain II J4N38_01550 PF03764 Elongation factor G, domain IV J4N38_01550 PF00009 Elongation factor Tu GTP binding domain J4N38_01550 PF03144 Elongation factor Tu domain 2 J4N38_01555 PF00009 Elongation factor Tu GTP binding domain J4N38_01555 PF03144 Elongation factor Tu domain 2 J4N38_01555 PF03143 Elongation factor Tu C-terminal domain J4N38_01560 PF04324 BFD-like [2Fe-2S] binding domain J4N38_01565 PF00210 Ferritin-like domain J4N38_01570 PF01250 Ribosomal protein S6 J4N38_01575 PF01084 Ribosomal protein S18 J4N38_01580 PF03948 Ribosomal protein L9, C-terminal domain J4N38_01580 PF01281 Ribosomal protein L9, N-terminal domain J4N38_01590 PF00772 DnaB-like helicase N terminal domain J4N38_01590 PF03796 DnaB-like helicase C terminal domain J4N38_01595 PF00842 Alanine racemase, C-terminal domain J4N38_01595 PF01168 Alanine racemase, N-terminal domain J4N38_01600 PF01894 Uncharacterised protein family UPF0047 J4N38_01605 PF00342 Phosphoglucose isomerase J4N38_01625 PF00005 ABC transporter J4N38_01640 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J4N38_01650 PF01625 Peptide methionine sulfoxide reductase J4N38_01655 PF17243 POTRA domain TamA domain 1 J4N38_01655 PF01103 Surface antigen J4N38_01655 PF07244 Surface antigen variable number repeat J4N38_01660 PF04357 TamB, inner membrane protein subunit of TAM complex J4N38_01665 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4N38_01670 PF00719 Inorganic pyrophosphatase J4N38_01675 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4N38_01680 PF01225 Mur ligase family, catalytic domain J4N38_01680 PF02875 Mur ligase family, glutamate ligase domain J4N38_01680 PF08245 Mur ligase middle domain J4N38_01685 PF02441 Flavoprotein J4N38_01695 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_01700 PF00005 ABC transporter J4N38_01710 PF17755 UvrA DNA-binding domain J4N38_01710 PF17760 UvrA interaction domain J4N38_01710 PF00005 ABC transporter J4N38_01715 PF00483 Nucleotidyl transferase J4N38_01720 PF00196 Bacterial regulatory proteins, luxR family J4N38_01725 PF00436 Single-strand binding protein family J4N38_01730 PF00563 EAL domain J4N38_01730 PF17157 Gammaproteobacterial periplasmic sensor domain J4N38_01730 PF00990 Diguanylate cyclase, GGDEF domain J4N38_01750 PF03958 Bacterial type II/III secretion system short domain J4N38_01750 PF00263 Bacterial type II and III secretion system protein J4N38_01755 PF01471 Putative peptidoglycan binding domain J4N38_01755 PF13401 AAA domain J4N38_01765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N38_01765 PF00437 Type II/IV secretion system protein J4N38_01770 PF00482 Type II secretion system (T2SS), protein F J4N38_01780 PF07963 Prokaryotic N-terminal methylation motif J4N38_01785 PF07963 Prokaryotic N-terminal methylation motif J4N38_01820 PF04085 rod shape-determining protein MreC J4N38_01825 PF04093 rod shape-determining protein MreD J4N38_01830 PF02545 Maf-like protein J4N38_01835 PF10150 Ribonuclease E/G family J4N38_01835 PF00575 S1 RNA binding domain J4N38_01840 PF13502 AsmA-like C-terminal region J4N38_01840 PF13116 Protein of unknown function J4N38_01845 PF00795 Carbon-nitrogen hydrolase J4N38_01850 PF01523 Putative modulator of DNA gyrase J4N38_01900 PF01464 Transglycosylase SLT domain J4N38_01900 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N38_01905 PF04362 Bacterial Fe(2+) trafficking J4N38_01910 PF00633 Helix-hairpin-helix motif J4N38_01910 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_01910 PF14815 NUDIX domain J4N38_01915 PF02390 Putative methyltransferase J4N38_01920 PF04960 Glutaminase J4N38_01925 PF06969 HemN C-terminal domain J4N38_01925 PF04055 Radical SAM superfamily J4N38_01930 PF01725 Ham1 family J4N38_01945 PF13006 Insertion element 4 transposase N-terminal J4N38_01945 PF01609 Transposase DDE domain J4N38_01960 PF02594 Uncharacterised ACR, YggU family COG1872 J4N38_01965 PF02325 YGGT family J4N38_01970 PF03807 NADP oxidoreductase coenzyme F420-dependent J4N38_01970 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4N38_01975 PF01168 Alanine racemase, N-terminal domain J4N38_01980 PF00437 Type II/IV secretion system protein J4N38_01985 PF00437 Type II/IV secretion system protein J4N38_01990 PF03652 Holliday junction resolvase J4N38_01995 PF02622 Uncharacterized ACR, COG1678 J4N38_02000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4N38_02000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4N38_02005 PF04452 RNA methyltransferase J4N38_02010 PF04231 Endonuclease I J4N38_02015 PF17283 SprT-like zinc ribbon domain J4N38_02015 PF10263 SprT-like family J4N38_02025 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4N38_02025 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4N38_02025 PF02772 S-adenosylmethionine synthetase, central domain J4N38_02035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_02035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_02040 PF00162 Phosphoglycerate kinase J4N38_02045 PF01116 Fructose-bisphosphate aldolase class-II J4N38_02050 PF00924 Mechanosensitive ion channel J4N38_02050 PF05552 Conserved TM helix J4N38_02060 PF01810 LysE type translocator J4N38_02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02065 PF03466 LysR substrate binding domain J4N38_02070 PF04402 Protein of unknown function (DUF541) J4N38_02075 PF00990 Diguanylate cyclase, GGDEF domain J4N38_02075 PF07694 5TMR of 5TMR-LYT J4N38_02085 PF00224 Pyruvate kinase, barrel domain J4N38_02085 PF02887 Pyruvate kinase, alpha/beta domain J4N38_02090 PF00455 DeoR C terminal sensor domain J4N38_02090 PF08220 DeoR-like helix-turn-helix domain J4N38_02095 PF01380 SIS domain J4N38_02100 PF00694 Aconitase C-terminal domain J4N38_02105 PF00330 Aconitase family (aconitate hydratase) J4N38_02120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_02120 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_02120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_02125 PF00501 AMP-binding enzyme J4N38_02130 PF03466 LysR substrate binding domain J4N38_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02145 PF00682 HMGL-like J4N38_02145 PF08502 LeuA allosteric (dimerisation) domain J4N38_02150 PF00180 Isocitrate/isopropylmalate dehydrogenase J4N38_02155 PF00330 Aconitase family (aconitate hydratase) J4N38_02160 PF00694 Aconitase C-terminal domain J4N38_02165 PF01380 SIS domain J4N38_02170 PF00455 DeoR C terminal sensor domain J4N38_02170 PF08220 DeoR-like helix-turn-helix domain J4N38_02175 PF02887 Pyruvate kinase, alpha/beta domain J4N38_02175 PF00224 Pyruvate kinase, barrel domain J4N38_02185 PF00990 Diguanylate cyclase, GGDEF domain J4N38_02185 PF07694 5TMR of 5TMR-LYT J4N38_02190 PF04402 Protein of unknown function (DUF541) J4N38_02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02195 PF03466 LysR substrate binding domain J4N38_02220 PF01116 Fructose-bisphosphate aldolase class-II J4N38_02225 PF05552 Conserved TM helix J4N38_02225 PF00924 Mechanosensitive ion channel J4N38_02235 PF01810 LysE type translocator J4N38_02240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02240 PF03466 LysR substrate binding domain J4N38_02245 PF04402 Protein of unknown function (DUF541) J4N38_02250 PF00990 Diguanylate cyclase, GGDEF domain J4N38_02250 PF07694 5TMR of 5TMR-LYT J4N38_02260 PF00224 Pyruvate kinase, barrel domain J4N38_02260 PF02887 Pyruvate kinase, alpha/beta domain J4N38_02265 PF08220 DeoR-like helix-turn-helix domain J4N38_02265 PF00455 DeoR C terminal sensor domain J4N38_02270 PF01380 SIS domain J4N38_02275 PF00694 Aconitase C-terminal domain J4N38_02280 PF00330 Aconitase family (aconitate hydratase) J4N38_02290 PF00682 HMGL-like J4N38_02290 PF08502 LeuA allosteric (dimerisation) domain J4N38_02305 PF03466 LysR substrate binding domain J4N38_02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02310 PF00501 AMP-binding enzyme J4N38_02315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_02315 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_02315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_02320 PF10369 Small subunit of acetolactate synthase J4N38_02325 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_02330 PF07690 Major Facilitator Superfamily J4N38_02335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_02335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_02335 PF01842 ACT domain J4N38_02340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4N38_02345 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4N38_02360 PF03695 Uncharacterised protein family (UPF0149) J4N38_02365 PF01494 FAD binding domain J4N38_02370 PF01494 FAD binding domain J4N38_02385 PF01571 Aminomethyltransferase folate-binding domain J4N38_02390 PF03937 Flavinator of succinate dehydrogenase J4N38_02395 PF00890 FAD binding domain J4N38_02395 PF02910 Fumarate reductase flavoprotein C-term J4N38_02400 PF08281 Sigma-70, region 4 J4N38_02400 PF04542 Sigma-70 region 2 J4N38_02405 PF03873 Anti sigma-E protein RseA, C-terminal domain J4N38_02405 PF03872 Anti sigma-E protein RseA, N-terminal domain J4N38_02410 PF03888 MucB/RseB N-terminal domain J4N38_02410 PF17188 MucB/RseB C-terminal domain J4N38_02420 PF00009 Elongation factor Tu GTP binding domain J4N38_02420 PF00679 Elongation factor G C-terminus J4N38_02420 PF03144 Elongation factor Tu domain 2 J4N38_02420 PF06421 GTP-binding protein LepA C-terminus J4N38_02425 PF10502 Signal peptidase, peptidase S26 J4N38_02430 PF14622 Ribonuclease-III-like J4N38_02430 PF00035 Double-stranded RNA binding motif J4N38_02435 PF01926 50S ribosome-binding GTPase J4N38_02435 PF07650 KH domain J4N38_02440 PF11967 Recombination protein O N terminal J4N38_02440 PF02565 Recombination protein O C terminal J4N38_02445 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4N38_02450 PF01648 4'-phosphopantetheinyl transferase superfamily J4N38_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_02455 PF01627 Hpt domain J4N38_02455 PF00072 Response regulator receiver domain J4N38_02455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_02455 PF00512 His Kinase A (phospho-acceptor) domain J4N38_02455 PF00672 HAMP domain J4N38_02460 PF01938 TRAM domain J4N38_02460 PF05958 tRNA (Uracil-5-)-methyltransferase J4N38_02465 PF13291 ACT domain J4N38_02465 PF04607 Region found in RelA / SpoT proteins J4N38_02465 PF02824 TGS domain J4N38_02470 PF03819 MazG nucleotide pyrophosphohydrolase domain J4N38_02475 PF06418 CTP synthase N-terminus J4N38_02475 PF00117 Glutamine amidotransferase class-I J4N38_02480 PF03952 Enolase, N-terminal domain J4N38_02480 PF00113 Enolase, C-terminal TIM barrel domain J4N38_02485 PF01966 HD domain J4N38_02485 PF01743 Poly A polymerase head domain J4N38_02485 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N38_02490 PF13401 AAA domain J4N38_02490 PF01471 Putative peptidoglycan binding domain J4N38_02495 PF16537 Type II secretion system protein B J4N38_02500 PF08239 Bacterial SH3 domain J4N38_02505 PF01384 Phosphate transporter family J4N38_02510 PF01865 Protein of unknown function DUF47 J4N38_02515 PF01928 CYTH domain J4N38_02520 PF07885 Ion channel J4N38_02520 PF00027 Cyclic nucleotide-binding domain J4N38_02525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_02525 PF00672 HAMP domain J4N38_02530 PF03710 Glutamate-ammonia ligase adenylyltransferase J4N38_02530 PF08335 GlnD PII-uridylyltransferase J4N38_02535 PF00294 pfkB family carbohydrate kinase J4N38_02535 PF01467 Cytidylyltransferase-like J4N38_02540 PF00072 Response regulator receiver domain J4N38_02540 PF00486 Transcriptional regulatory protein, C terminal J4N38_02550 PF03737 Aldolase/RraA J4N38_02560 PF01842 ACT domain J4N38_02560 PF13840 ACT domain J4N38_02560 PF00742 Homoserine dehydrogenase J4N38_02560 PF03447 Homoserine dehydrogenase, NAD binding domain J4N38_02560 PF00696 Amino acid kinase family J4N38_02565 PF08544 GHMP kinases C terminal J4N38_02565 PF00288 GHMP kinases N terminal domain J4N38_02570 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_02570 PF14821 Threonine synthase N terminus J4N38_02575 PF03458 UPF0126 domain J4N38_02580 PF01497 Periplasmic binding protein J4N38_02590 PF01048 Phosphorylase superfamily J4N38_02595 PF00312 Ribosomal protein S15 J4N38_02600 PF03725 3' exoribonuclease family, domain 2 J4N38_02600 PF00013 KH domain J4N38_02600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4N38_02600 PF00575 S1 RNA binding domain J4N38_02600 PF01138 3' exoribonuclease family, domain 1 J4N38_02605 PF13181 Tetratricopeptide repeat J4N38_02605 PF07719 Tetratricopeptide repeat J4N38_02615 PF01554 MatE J4N38_02620 PF02954 Bacterial regulatory protein, Fis family J4N38_02620 PF00072 Response regulator receiver domain J4N38_02620 PF00158 Sigma-54 interaction domain J4N38_02630 PF00248 Aldo/keto reductase family J4N38_02640 PF02976 DNA mismatch repair enzyme MutH J4N38_02645 PF00293 NUDIX domain J4N38_02650 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_02650 PF00391 PEP-utilising enzyme, mobile domain J4N38_02650 PF05524 PEP-utilising enzyme, N-terminal J4N38_02650 PF01590 GAF domain J4N38_02655 PF01925 Sulfite exporter TauE/SafE J4N38_02660 PF01790 Prolipoprotein diacylglyceryl transferase J4N38_02665 PF00303 Thymidylate synthase J4N38_02670 PF02690 Na+/Pi-cotransporter J4N38_02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02675 PF03466 LysR substrate binding domain J4N38_02680 PF01022 Bacterial regulatory protein, arsR family J4N38_02685 PF01649 Ribosomal protein S20 J4N38_02690 PF03023 Lipid II flippase MurJ J4N38_02695 PF06574 FAD synthetase J4N38_02695 PF01687 Riboflavin kinase J4N38_02700 PF08264 Anticodon-binding domain of tRNA J4N38_02700 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_02700 PF06827 Zinc finger found in FPG and IleRS J4N38_02705 PF01252 Signal peptidase (SPase) II J4N38_02710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_02715 PF02401 LytB protein J4N38_02720 PF02554 Carbon starvation protein CstA J4N38_02730 PF13580 SIS domain J4N38_02735 PF03702 Anhydro-N-acetylmuramic acid kinase J4N38_02740 PF01869 BadF/BadG/BcrA/BcrD ATPase family J4N38_02750 PF01380 SIS domain J4N38_02750 PF01418 Helix-turn-helix domain, rpiR family J4N38_02755 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_02760 PF00072 Response regulator receiver domain J4N38_02760 PF04397 LytTr DNA-binding domain J4N38_02765 PF06580 Histidine kinase J4N38_02765 PF07694 5TMR of 5TMR-LYT J4N38_02770 PF00793 DAHP synthetase I family J4N38_02775 PF02153 Prephenate dehydrogenase J4N38_02775 PF01817 Chorismate mutase type II J4N38_02780 PF04225 Opacity-associated protein A LysM-like domain J4N38_02780 PF01551 Peptidase family M23 J4N38_02785 PF07238 PilZ domain J4N38_02790 PF12848 ABC transporter J4N38_02790 PF00005 ABC transporter J4N38_02795 PF14718 Soluble lytic murein transglycosylase L domain J4N38_02795 PF01464 Transglycosylase SLT domain J4N38_02800 PF01371 Trp repressor protein J4N38_02805 PF01931 Protein of unknown function DUF84 J4N38_02810 PF00990 Diguanylate cyclase, GGDEF domain J4N38_02810 PF00563 EAL domain J4N38_02815 PF13416 Bacterial extracellular solute-binding protein J4N38_02820 PF01817 Chorismate mutase type II J4N38_02820 PF00800 Prephenate dehydratase J4N38_02825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N38_02830 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_02830 PF01464 Transglycosylase SLT domain J4N38_02835 PF13525 Outer membrane lipoprotein J4N38_02840 PF00849 RNA pseudouridylate synthase J4N38_02840 PF01479 S4 domain J4N38_02845 PF02578 Multi-copper polyphenol oxidoreductase laccase J4N38_02850 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_02850 PF07724 AAA domain (Cdc48 subfamily) J4N38_02850 PF17871 AAA lid domain J4N38_02850 PF02861 Clp amino terminal domain, pathogenicity island component J4N38_02850 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_02895 PF00459 Inositol monophosphatase family J4N38_02900 PF00588 SpoU rRNA Methylase family J4N38_02905 PF02082 Transcriptional regulator J4N38_02910 PF00266 Aminotransferase class-V J4N38_02915 PF01592 NifU-like N terminal domain J4N38_02920 PF01521 Iron-sulphur cluster biosynthesis J4N38_02925 PF07743 HSCB C-terminal oligomerisation domain J4N38_02925 PF00226 DnaJ domain J4N38_02930 PF00012 Hsp70 protein J4N38_02935 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_02940 PF04384 Iron-sulphur cluster assembly J4N38_02945 PF00883 Cytosol aminopeptidase family, catalytic domain J4N38_02945 PF12404 Peptidase J4N38_02950 PF00334 Nucleoside diphosphate kinase J4N38_02955 PF00679 Elongation factor G C-terminus J4N38_02955 PF14492 Elongation Factor G, domain II J4N38_02955 PF03764 Elongation factor G, domain IV J4N38_02955 PF00009 Elongation factor Tu GTP binding domain J4N38_02955 PF03144 Elongation factor Tu domain 2 J4N38_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02960 PF03466 LysR substrate binding domain J4N38_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_02970 PF03466 LysR substrate binding domain J4N38_02975 PF00501 AMP-binding enzyme J4N38_02980 PF02805 Metal binding domain of Ada J4N38_02980 PF12833 Helix-turn-helix domain J4N38_03010 PF04972 BON domain J4N38_03010 PF00263 Bacterial type II and III secretion system protein J4N38_03010 PF13629 Pilus formation protein N terminal region J4N38_03040 PF00437 Type II/IV secretion system protein J4N38_03060 PF02417 Chromate transporter J4N38_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_03065 PF03466 LysR substrate binding domain J4N38_03075 PF12833 Helix-turn-helix domain J4N38_03080 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N38_03080 PF02056 Family 4 glycosyl hydrolase J4N38_03095 PF16363 GDP-mannose 4,6 dehydratase J4N38_03100 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4N38_03100 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4N38_03105 PF10509 Galactokinase galactose-binding signature J4N38_03105 PF08544 GHMP kinases C terminal J4N38_03105 PF00288 GHMP kinases N terminal domain J4N38_03110 PF01263 Aldose 1-epimerase J4N38_03115 PF00356 Bacterial regulatory proteins, lacI family J4N38_03130 PF00990 Diguanylate cyclase, GGDEF domain J4N38_03130 PF03707 Bacterial signalling protein N terminal repeat J4N38_03130 PF00563 EAL domain J4N38_03135 PF00356 Bacterial regulatory proteins, lacI family J4N38_03150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_03150 PF02378 Phosphotransferase system, EIIC J4N38_03150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_03160 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle J4N38_03160 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_03165 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N38_03165 PF00578 AhpC/TSA family J4N38_03170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_03170 PF03466 LysR substrate binding domain J4N38_03175 PF01274 Malate synthase J4N38_03180 PF00463 Isocitrate lyase family J4N38_03200 PF00571 CBS domain J4N38_03205 PF02547 Queuosine biosynthesis protein J4N38_03210 PF01702 Queuine tRNA-ribosyltransferase J4N38_03215 PF02699 Preprotein translocase subunit J4N38_03220 PF07549 SecD/SecF GG Motif J4N38_03220 PF13721 SecD export protein N-terminal TM region J4N38_03220 PF02355 Protein export membrane protein J4N38_03225 PF07549 SecD/SecF GG Motif J4N38_03225 PF02355 Protein export membrane protein J4N38_03235 PF03411 Penicillin-insensitive murein endopeptidase J4N38_03240 PF13006 Insertion element 4 transposase N-terminal J4N38_03240 PF01609 Transposase DDE domain J4N38_03245 PF12838 4Fe-4S dicluster domain J4N38_03250 PF16325 Peptidase family U32 C-terminal domain J4N38_03250 PF01136 Peptidase family U32 J4N38_03255 PF04381 Putative exonuclease, RdgC J4N38_03260 PF00072 Response regulator receiver domain J4N38_03260 PF00486 Transcriptional regulatory protein, C terminal J4N38_03265 PF00512 His Kinase A (phospho-acceptor) domain J4N38_03265 PF00989 PAS fold J4N38_03265 PF11808 Phosphate regulon sensor protein PhoR J4N38_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_03270 PF12849 PBP superfamily domain J4N38_03275 PF02541 Ppx/GppA phosphatase family J4N38_03280 PF13089 Polyphosphate kinase N-terminal domain J4N38_03280 PF17941 Polyphosphate kinase C-terminal domain 1 J4N38_03280 PF13090 Polyphosphate kinase C-terminal domain 2 J4N38_03280 PF02503 Polyphosphate kinase middle domain J4N38_03285 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_03290 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_03295 PF00005 ABC transporter J4N38_03300 PF01895 PhoU domain J4N38_03305 PF03976 Polyphosphate kinase 2 (PPK2) J4N38_03310 PF03932 CutC family J4N38_03315 PF13006 Insertion element 4 transposase N-terminal J4N38_03315 PF01609 Transposase DDE domain J4N38_03320 PF07130 YebG protein J4N38_03325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_03325 PF03466 LysR substrate binding domain J4N38_03335 PF17946 RecC C-terminal domain J4N38_03340 PF00580 UvrD/REP helicase N-terminal domain J4N38_03340 PF12705 PD-(D/E)XK nuclease superfamily J4N38_03340 PF13361 UvrD-like helicase C-terminal domain J4N38_03345 PF13538 UvrD-like helicase C-terminal domain J4N38_03355 PF00696 Amino acid kinase family J4N38_03355 PF00583 Acetyltransferase (GNAT) family J4N38_03365 PF06725 3D domain J4N38_03365 PF03562 MltA specific insert domain J4N38_03370 PF00899 ThiF family J4N38_03375 PF02657 Fe-S metabolism associated domain J4N38_03380 PF04055 Radical SAM superfamily J4N38_03385 PF13464 Domain of unknown function (DUF4115) J4N38_03390 PF04551 GcpE protein J4N38_03395 PF03129 Anticodon binding domain J4N38_03395 PF13393 Histidyl-tRNA synthetase J4N38_03400 PF09976 Tetratricopeptide repeat-like domain J4N38_03405 PF13360 PQQ-like domain J4N38_03410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4N38_03410 PF01926 50S ribosome-binding GTPase J4N38_03415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_03415 PF02272 DHHA1 domain J4N38_03415 PF01411 tRNA synthetases class II (A) J4N38_03425 PF13742 OB-fold nucleic acid binding domain J4N38_03425 PF02601 Exonuclease VII, large subunit J4N38_03430 PF00571 CBS domain J4N38_03430 PF00478 IMP dehydrogenase / GMP reductase domain J4N38_03435 PF02540 NAD synthase J4N38_03435 PF00958 GMP synthase C terminal domain J4N38_03435 PF00117 Glutamine amidotransferase class-I J4N38_03440 PF00704 Glycosyl hydrolases family 18 J4N38_03440 PF06483 Chitinase C J4N38_03445 PF01184 GPR1/FUN34/yaaH family J4N38_03450 PF01235 Sodium:alanine symporter family J4N38_03455 PF01266 FAD dependent oxidoreductase J4N38_03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_03460 PF03466 LysR substrate binding domain J4N38_03465 PF07885 Ion channel J4N38_03475 PF00072 Response regulator receiver domain J4N38_03475 PF01584 CheW-like domain J4N38_03480 PF01553 Acyltransferase J4N38_03485 PF05922 Peptidase inhibitor I9 J4N38_03485 PF00082 Subtilase family J4N38_03495 PF00696 Amino acid kinase family J4N38_03495 PF13840 ACT domain J4N38_03500 PF00360 Phytochrome region J4N38_03500 PF00990 Diguanylate cyclase, GGDEF domain J4N38_03500 PF00563 EAL domain J4N38_03500 PF01590 GAF domain J4N38_03505 PF07694 5TMR of 5TMR-LYT J4N38_03505 PF00990 Diguanylate cyclase, GGDEF domain J4N38_03515 PF03448 MgtE intracellular N domain J4N38_03515 PF01769 Divalent cation transporter J4N38_03515 PF00571 CBS domain J4N38_03520 PF18030 RimK PreATP-grasp domain J4N38_03520 PF08443 RimK-like ATP-grasp domain J4N38_03525 PF18030 RimK PreATP-grasp domain J4N38_03525 PF08443 RimK-like ATP-grasp domain J4N38_03540 PF01668 SmpB protein J4N38_03545 PF03364 Polyketide cyclase / dehydrase and lipid transport J4N38_03550 PF03658 RnfH family Ubiquitin J4N38_03555 PF04355 SmpA / OmlA family J4N38_03560 PF02463 RecF/RecN/SMC N terminal domain J4N38_03565 PF01513 ATP-NAD kinase J4N38_03570 PF01025 GrpE J4N38_03575 PF00375 Sodium:dicarboxylate symporter family J4N38_03580 PF00012 Hsp70 protein J4N38_03585 PF00684 DnaJ central domain J4N38_03585 PF01556 DnaJ C terminal domain J4N38_03585 PF00226 DnaJ domain J4N38_03615 PF03806 AbgT putative transporter family J4N38_03620 PF14437 MafB19-like deaminase J4N38_03625 PF01464 Transglycosylase SLT domain J4N38_03625 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_03630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4N38_03630 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4N38_03630 PF02769 AIR synthase related protein, C-terminal domain J4N38_03645 PF06786 Uncharacterised protein family (UPF0253) J4N38_03655 PF00551 Formyl transferase J4N38_03660 PF00586 AIR synthase related protein, N-terminal domain J4N38_03660 PF02769 AIR synthase related protein, C-terminal domain J4N38_03670 PF00849 RNA pseudouridylate synthase J4N38_03670 PF01479 S4 domain J4N38_03675 PF01713 Smr domain J4N38_03695 PF03173 Putative carbohydrate binding domain J4N38_03695 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J4N38_03695 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N38_03695 PF02838 Glycosyl hydrolase family 20, domain 2 J4N38_03700 PF00854 POT family J4N38_03705 PF00733 Asparagine synthase J4N38_03705 PF13537 Glutamine amidotransferase domain J4N38_03710 PF00999 Sodium/hydrogen exchanger family J4N38_03710 PF02254 TrkA-N domain J4N38_03715 PF01047 MarR family J4N38_03715 PF00480 ROK family J4N38_03720 PF01979 Amidohydrolase family J4N38_03725 PF02378 Phosphotransferase system, EIIC J4N38_03725 PF00367 phosphotransferase system, EIIB J4N38_03725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N38_03730 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_03730 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4N38_03735 PF01475 Ferric uptake regulator family J4N38_03745 PF13609 Gram-negative porin J4N38_03760 PF01145 SPFH domain / Band 7 family J4N38_03760 PF16200 C-terminal region of band_7 J4N38_03765 PF00085 Thioredoxin J4N38_03770 PF00106 short chain dehydrogenase J4N38_03775 PF08338 Domain of unknown function (DUF1731) J4N38_03775 PF01370 NAD dependent epimerase/dehydratase family J4N38_03780 PF07556 Protein of unknown function (DUF1538) J4N38_03785 PF07556 Protein of unknown function (DUF1538) J4N38_03800 PF12850 Calcineurin-like phosphoesterase superfamily domain J4N38_03815 PF17323 Trans-membrane regulatory protein ToxS J4N38_03820 PF00486 Transcriptional regulatory protein, C terminal J4N38_03825 PF00183 Hsp90 protein J4N38_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_03830 PF05191 Adenylate kinase, active site lid J4N38_03835 PF00762 Ferrochelatase J4N38_03840 PF01223 DNA/RNA non-specific endonuclease J4N38_03845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N38_03845 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N38_03850 PF11892 Domain of unknown function (DUF3412) J4N38_03850 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4N38_03850 PF03641 Possible lysine decarboxylase J4N38_03855 PF00990 Diguanylate cyclase, GGDEF domain J4N38_03865 PF14489 QueF-like protein J4N38_03865 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N38_03870 PF07348 Syd protein (SUKH-2) J4N38_03875 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J4N38_03890 PF01546 Peptidase family M20/M25/M40 J4N38_03890 PF07687 Peptidase dimerisation domain J4N38_03895 PF03960 ArsC family J4N38_03920 PF02335 Cytochrome c552 J4N38_03930 PF13247 4Fe-4S dicluster domain J4N38_03930 PF00037 4Fe-4S binding domain J4N38_03935 PF03916 Polysulphide reductase, NrfD J4N38_03940 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N38_03940 PF01578 Cytochrome C assembly protein J4N38_03945 PF08534 Redoxin J4N38_03950 PF03918 Cytochrome C biogenesis protein J4N38_03955 PF11143 Protein of unknown function (DUF2919) J4N38_03960 PF04261 Dyp-type peroxidase family J4N38_03965 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4N38_03975 PF00579 tRNA synthetases class I (W and Y) J4N38_03980 PF01476 LysM domain J4N38_03980 PF08525 Opacity-associated protein A N-terminal motif J4N38_03980 PF01551 Peptidase family M23 J4N38_03985 PF00700 Bacterial flagellin C-terminal helical region J4N38_03985 PF00669 Bacterial flagellin N-terminal helical region J4N38_03985 PF07196 Flagellin hook IN motif J4N38_03990 PF07196 Flagellin hook IN motif J4N38_03990 PF00669 Bacterial flagellin N-terminal helical region J4N38_03990 PF00700 Bacterial flagellin C-terminal helical region J4N38_03995 PF00700 Bacterial flagellin C-terminal helical region J4N38_03995 PF07196 Flagellin hook IN motif J4N38_03995 PF00669 Bacterial flagellin N-terminal helical region J4N38_04000 PF03646 FlaG protein J4N38_04005 PF02465 Flagellar hook-associated protein 2 N-terminus J4N38_04005 PF07195 Flagellar hook-associated protein 2 C-terminus J4N38_04005 PF07196 Flagellin hook IN motif J4N38_04015 PF02561 Flagellar protein FliS J4N38_04020 PF06490 Flagellar regulatory protein FleQ J4N38_04020 PF00158 Sigma-54 interaction domain J4N38_04020 PF02954 Bacterial regulatory protein, Fis family J4N38_04025 PF13188 PAS domain J4N38_04025 PF00512 His Kinase A (phospho-acceptor) domain J4N38_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_04030 PF00072 Response regulator receiver domain J4N38_04030 PF02954 Bacterial regulatory protein, Fis family J4N38_04030 PF00158 Sigma-54 interaction domain J4N38_04035 PF02049 Flagellar hook-basal body complex protein FliE J4N38_04040 PF01514 Secretory protein of YscJ/FliF family J4N38_04040 PF08345 Flagellar M-ring protein C-terminal J4N38_04045 PF01706 FliG C-terminal domain J4N38_04045 PF14842 FliG N-terminal domain J4N38_04045 PF14841 FliG middle domain J4N38_04055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_04055 PF18269 T3SS EscN ATPase C-terminal domain J4N38_04075 PF02154 Flagellar motor switch protein FliM J4N38_04075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_04080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_04085 PF04347 Flagellar biosynthesis protein, FliO J4N38_04090 PF00813 FliP family J4N38_04095 PF01313 Bacterial export proteins, family 3 J4N38_04100 PF01311 Bacterial export proteins, family 1 J4N38_04105 PF01312 FlhB HrpN YscU SpaS Family J4N38_04110 PF01713 Smr domain J4N38_04115 PF05175 Methyltransferase small domain J4N38_04120 PF01264 Chorismate synthase J4N38_04130 PF03458 UPF0126 domain J4N38_04135 PF04315 Elongation factor P hydroxylase J4N38_04150 PF08891 YfcL protein J4N38_04155 PF01266 FAD dependent oxidoreductase J4N38_04155 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4N38_04160 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_04160 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_04165 PF11890 Domain of unknown function (DUF3410) J4N38_04165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_04165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_04170 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_04170 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_04180 PF01416 tRNA pseudouridine synthase J4N38_04185 PF01039 Carboxyl transferase domain J4N38_04185 PF17848 Acetyl-coA carboxylase zinc finger domain J4N38_04190 PF02875 Mur ligase family, glutamate ligase domain J4N38_04190 PF08245 Mur ligase middle domain J4N38_04195 PF05036 Sporulation related domain J4N38_04200 PF02674 Colicin V production protein J4N38_04205 PF00156 Phosphoribosyl transferase domain J4N38_04210 PF00950 ABC 3 transport family J4N38_04215 PF00005 ABC transporter J4N38_04220 PF01297 Zinc-uptake complex component A periplasmic J4N38_04225 PF12833 Helix-turn-helix domain J4N38_04225 PF02311 AraC-like ligand binding domain J4N38_04230 PF04023 FeoA domain J4N38_04235 PF07670 Nucleoside recognition J4N38_04235 PF02421 Ferrous iron transport protein B J4N38_04235 PF07664 Ferrous iron transport protein B C terminus J4N38_04250 PF00750 tRNA synthetases class I (R) J4N38_04250 PF05746 DALR anticodon binding domain J4N38_04250 PF03485 Arginyl tRNA synthetase N terminal domain J4N38_04255 PF06185 YecM protein J4N38_04260 PF05193 Peptidase M16 inactive domain J4N38_04260 PF00675 Insulinase (Peptidase family M16) J4N38_04265 PF00300 Histidine phosphatase superfamily (branch 1) J4N38_04270 PF00771 FHIPEP family J4N38_04275 PF00448 SRP54-type protein, GTPase domain J4N38_04280 PF10609 NUBPL iron-transfer P-loop NTPase J4N38_04285 PF04542 Sigma-70 region 2 J4N38_04285 PF04539 Sigma-70 region 3 J4N38_04285 PF04545 Sigma-70, region 4 J4N38_04290 PF00072 Response regulator receiver domain J4N38_04295 PF04344 Chemotaxis phosphatase, CheZ J4N38_04300 PF00072 Response regulator receiver domain J4N38_04300 PF01627 Hpt domain J4N38_04300 PF01584 CheW-like domain J4N38_04300 PF02895 Signal transducing histidine kinase, homodimeric domain J4N38_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_04305 PF01339 CheB methylesterase J4N38_04305 PF00072 Response regulator receiver domain J4N38_04310 PF13614 AAA domain J4N38_04320 PF01584 CheW-like domain J4N38_04330 PF00005 ABC transporter J4N38_04335 PF03379 CcmB protein J4N38_04340 PF01578 Cytochrome C assembly protein J4N38_04345 PF04995 Heme exporter protein D (CcmD) J4N38_04350 PF03100 CcmE J4N38_04355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N38_04355 PF01578 Cytochrome C assembly protein J4N38_04360 PF08534 Redoxin J4N38_04365 PF03918 Cytochrome C biogenesis protein J4N38_04370 PF03918 Cytochrome C biogenesis protein J4N38_04375 PF04333 MlaA lipoprotein J4N38_04380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_04385 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_04395 PF04542 Sigma-70 region 2 J4N38_04395 PF08281 Sigma-70, region 4 J4N38_04400 PF02803 Thiolase, C-terminal domain J4N38_04400 PF00108 Thiolase, N-terminal domain J4N38_04405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N38_04405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N38_04405 PF00378 Enoyl-CoA hydratase/isomerase J4N38_04410 PF00881 Nitroreductase family J4N38_04415 PF03466 LysR substrate binding domain J4N38_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_04420 PF00072 Response regulator receiver domain J4N38_04425 PF04304 Protein of unknown function (DUF454) J4N38_04430 PF00156 Phosphoribosyl transferase domain J4N38_04435 PF12169 DNA polymerase III subunits gamma and tau domain III J4N38_04435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4N38_04435 PF12170 DNA polymerase III tau subunit V interacting with alpha J4N38_04440 PF02575 YbaB/EbfC DNA-binding family J4N38_04445 PF02132 RecR protein J4N38_04445 PF13662 Toprim domain J4N38_04450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4N38_04450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4N38_04465 PF00072 Response regulator receiver domain J4N38_04465 PF00486 Transcriptional regulatory protein, C terminal J4N38_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_04470 PF00512 His Kinase A (phospho-acceptor) domain J4N38_04470 PF00672 HAMP domain J4N38_04475 PF01547 Bacterial extracellular solute-binding protein J4N38_04480 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_04485 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_04490 PF00005 ABC transporter J4N38_04490 PF17912 MalK OB fold domain J4N38_04490 PF03459 TOBE domain J4N38_04495 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_04500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_04505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_04515 PF00072 Response regulator receiver domain J4N38_04515 PF00158 Sigma-54 interaction domain J4N38_04515 PF02954 Bacterial regulatory protein, Fis family J4N38_04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_04520 PF00512 His Kinase A (phospho-acceptor) domain J4N38_04520 PF02743 Cache domain J4N38_04525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_04525 PF05697 Bacterial trigger factor protein (TF) J4N38_04525 PF05698 Bacterial trigger factor protein (TF) C-terminus J4N38_04530 PF00574 Clp protease J4N38_04535 PF07724 AAA domain (Cdc48 subfamily) J4N38_04535 PF06689 ClpX C4-type zinc finger J4N38_04535 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_04540 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_04540 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_04540 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4N38_04545 PF00216 Bacterial DNA-binding protein J4N38_04550 PF13145 PPIC-type PPIASE domain J4N38_04560 PF02224 Cytidylate kinase J4N38_04565 PF00575 S1 RNA binding domain J4N38_04570 PF00216 Bacterial DNA-binding protein J4N38_04575 PF06305 Lipopolysaccharide assembly protein A domain J4N38_04580 PF18073 Rubredoxin metal binding domain J4N38_04585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4N38_04590 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4N38_04600 PF03466 LysR substrate binding domain J4N38_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_04615 PF02653 Branched-chain amino acid transport system / permease component J4N38_04620 PF00005 ABC transporter J4N38_04625 PF01207 Dihydrouridine synthase (Dus) J4N38_04630 PF02810 SEC-C motif J4N38_04630 PF07517 SecA DEAD-like domain J4N38_04630 PF01043 SecA preprotein cross-linking domain J4N38_04630 PF07516 SecA Wing and Scaffold domain J4N38_04635 PF03548 Outer membrane lipoprotein carrier protein LolA J4N38_04640 PF12002 MgsA AAA+ ATPase C terminal J4N38_04640 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_04640 PF16193 AAA C-terminal domain J4N38_04645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_04645 PF02403 Seryl-tRNA synthetase N-terminal domain J4N38_04650 PF00710 Asparaginase, N-terminal J4N38_04650 PF17763 Glutaminase/Asparaginase C-terminal domain J4N38_04655 PF01343 Peptidase family S49 J4N38_04660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_04660 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_04665 PF01842 ACT domain J4N38_04665 PF00551 Formyl transferase J4N38_04675 PF13307 Helicase C-terminal domain J4N38_04675 PF04851 Type III restriction enzyme, res subunit J4N38_04680 PF00814 Glycoprotease family J4N38_04695 PF00561 alpha/beta hydrolase fold J4N38_04700 PF13193 AMP-binding enzyme C-terminal domain J4N38_04700 PF00501 AMP-binding enzyme J4N38_04705 PF00570 HRDC domain J4N38_04705 PF01612 3'-5' exonuclease J4N38_04710 PF01740 STAS domain J4N38_04710 PF00916 Sulfate permease family J4N38_04715 PF00575 S1 RNA binding domain J4N38_04715 PF12111 Polyribonucleotide phosphorylase C terminal J4N38_04715 PF10150 Ribonuclease E/G family J4N38_04720 PF01479 S4 domain J4N38_04720 PF00849 RNA pseudouridylate synthase J4N38_04725 PF02545 Maf-like protein J4N38_04730 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4N38_04735 PF01783 Ribosomal L32p protein family J4N38_04740 PF02504 Fatty acid synthesis protein J4N38_04745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N38_04745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N38_04750 PF00698 Acyl transferase domain J4N38_04760 PF00550 Phosphopantetheine attachment site J4N38_04765 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_04765 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_04770 PF01063 Amino-transferase class IV J4N38_04775 PF02618 YceG-like family J4N38_04780 PF02223 Thymidylate kinase J4N38_04785 PF09115 DNA polymerase III, delta subunit, C terminal J4N38_04790 PF01026 TatD related DNase J4N38_04795 PF00367 phosphotransferase system, EIIB J4N38_04795 PF02378 Phosphotransferase system, EIIC J4N38_04810 PF00209 Sodium:neurotransmitter symporter family J4N38_04825 PF01734 Patatin-like phospholipase J4N38_04830 PF13460 NAD(P)H-binding J4N38_04830 PF11066 Protein of unknown function (DUF2867) J4N38_04850 PF02075 Crossover junction endodeoxyribonuclease RuvC J4N38_04855 PF02203 Tar ligand binding domain homologue J4N38_04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_04855 PF00672 HAMP domain J4N38_04860 PF07499 RuvA, C-terminal domain J4N38_04860 PF01330 RuvA N terminal domain J4N38_04865 PF17864 RuvB AAA lid domain J4N38_04865 PF05491 RuvB C-terminal winged helix domain J4N38_04865 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4N38_04870 PF01654 Cytochrome bd terminal oxidase subunit I J4N38_04875 PF02322 Cytochrome bd terminal oxidase subunit II J4N38_04880 PF08173 Membrane bound YbgT-like protein J4N38_04890 PF03061 Thioesterase superfamily J4N38_04895 PF01618 MotA/TolQ/ExbB proton channel family J4N38_04900 PF02472 Biopolymer transport protein ExbD/TolR J4N38_04910 PF07676 WD40-like Beta Propeller Repeat J4N38_04910 PF04052 TolB amino-terminal domain J4N38_04915 PF00691 OmpA family J4N38_04920 PF16331 TolA binding protein trimerisation J4N38_04920 PF13174 Tetratricopeptide repeat J4N38_04925 PF02445 Quinolinate synthetase A protein J4N38_04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_04940 PF00512 His Kinase A (phospho-acceptor) domain J4N38_04940 PF09308 LuxQ, periplasmic J4N38_04940 PF00072 Response regulator receiver domain J4N38_04945 PF06610 L-alanine exporter J4N38_04955 PF07728 AAA domain (dynein-related subfamily) J4N38_04955 PF12102 Domain of unknown function (DUF3578) J4N38_04975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_04980 PF01161 Phosphatidylethanolamine-binding protein J4N38_04990 PF01238 Phosphomannose isomerase type I J4N38_04995 PF00480 ROK family J4N38_05010 PF16295 Tetracyclin repressor-like, C-terminal domain J4N38_05010 PF00440 Bacterial regulatory proteins, tetR family J4N38_05015 PF09317 Domain of unknown function (DUF1974) J4N38_05015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_05015 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_05015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_05020 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N38_05020 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N38_05020 PF07055 Enoyl reductase FAD binding domain J4N38_05030 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_05035 PF00672 HAMP domain J4N38_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_05040 PF08007 Cupin superfamily protein J4N38_05045 PF10689 Protein of unknown function (DUF2496) J4N38_05055 PF01925 Sulfite exporter TauE/SafE J4N38_05060 PF06733 DEAD_2 J4N38_05060 PF13307 Helicase C-terminal domain J4N38_05070 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N38_05075 PF00202 Aminotransferase class-III J4N38_05080 PF06968 Biotin and Thiamin Synthesis associated domain J4N38_05080 PF04055 Radical SAM superfamily J4N38_05085 PF00155 Aminotransferase class I and II J4N38_05090 PF08241 Methyltransferase domain J4N38_05090 PF12697 Alpha/beta hydrolase family J4N38_05105 PF01435 Peptidase family M48 J4N38_05140 PF16036 Chalcone isomerase-like J4N38_05150 PF00206 Lyase J4N38_05150 PF08328 Adenylosuccinate lyase C-terminal J4N38_05155 PF04356 Protein of unknown function (DUF489) J4N38_05170 PF00294 pfkB family carbohydrate kinase J4N38_05175 PF00816 H-NS histone family J4N38_05180 PF03553 Na+/H+ antiporter family J4N38_05185 PF01634 ATP phosphoribosyltransferase J4N38_05185 PF08029 HisG, C-terminal domain J4N38_05190 PF00815 Histidinol dehydrogenase J4N38_05195 PF00155 Aminotransferase class I and II J4N38_05200 PF00475 Imidazoleglycerol-phosphate dehydratase J4N38_05200 PF08645 Polynucleotide kinase 3 phosphatase J4N38_05205 PF00117 Glutamine amidotransferase class-I J4N38_05210 PF00977 Histidine biosynthesis protein J4N38_05215 PF00977 Histidine biosynthesis protein J4N38_05220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4N38_05220 PF01502 Phosphoribosyl-AMP cyclohydrolase J4N38_05225 PF00990 Diguanylate cyclase, GGDEF domain J4N38_05225 PF00563 EAL domain J4N38_05225 PF13426 PAS domain J4N38_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_05230 PF00512 His Kinase A (phospho-acceptor) domain J4N38_05230 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_05230 PF00072 Response regulator receiver domain J4N38_05240 PF00072 Response regulator receiver domain J4N38_05250 PF01368 DHH family J4N38_05250 PF02833 DHHA2 domain J4N38_05260 PF00005 ABC transporter J4N38_05265 PF00005 ABC transporter J4N38_05265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_05270 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_05270 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_05275 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_05280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_05285 PF00158 Sigma-54 interaction domain J4N38_05285 PF02954 Bacterial regulatory protein, Fis family J4N38_05290 PF04012 PspA/IM30 family J4N38_05295 PF06667 Phage shock protein B J4N38_05310 PF13533 Biotin-lipoyl like J4N38_05315 PF00873 AcrB/AcrD/AcrF family J4N38_05320 PF03352 Methyladenine glycosylase J4N38_05325 PF03280 Proteobacterial lipase chaperone protein J4N38_05330 PF00561 alpha/beta hydrolase fold J4N38_05335 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N38_05340 PF13396 Phospholipase_D-nuclease N-terminal J4N38_05340 PF13091 PLD-like domain J4N38_05345 PF00209 Sodium:neurotransmitter symporter family J4N38_05350 PF00849 RNA pseudouridylate synthase J4N38_05355 PF17785 PUA-like domain J4N38_05355 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_05365 PF01066 CDP-alcohol phosphatidyltransferase J4N38_05370 PF00005 ABC transporter J4N38_05375 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_05380 PF13416 Bacterial extracellular solute-binding protein J4N38_05390 PF06945 Protein of unknown function (DUF1289) J4N38_05405 PF03795 YCII-related domain J4N38_05410 PF03061 Thioesterase superfamily J4N38_05415 PF04279 Intracellular septation protein A J4N38_05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_05425 PF00072 Response regulator receiver domain J4N38_05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_05430 PF00072 Response regulator receiver domain J4N38_05435 PF17327 Acyl homoserine lactone synthase J4N38_05440 PF00216 Bacterial DNA-binding protein J4N38_05445 PF04269 Protein of unknown function, DUF440 J4N38_05450 PF09285 Elongation factor P, C-terminal J4N38_05450 PF08207 Elongation factor P (EF-P) KOW-like domain J4N38_05450 PF01132 Elongation factor P (EF-P) OB domain J4N38_05460 PF03104 DNA polymerase family B, exonuclease domain J4N38_05460 PF00136 DNA polymerase family B J4N38_05475 PF00072 Response regulator receiver domain J4N38_05475 PF00196 Bacterial regulatory proteins, luxR family J4N38_05480 PF08459 UvrC Helix-hairpin-helix N-terminal J4N38_05480 PF01541 GIY-YIG catalytic domain J4N38_05480 PF02151 UvrB/uvrC motif J4N38_05485 PF01066 CDP-alcohol phosphatidyltransferase J4N38_05510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_05520 PF00266 Aminotransferase class-V J4N38_05525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_05525 PF12729 Four helix bundle sensory module for signal transduction J4N38_05525 PF00672 HAMP domain J4N38_05530 PF11842 Domain of unknown function (DUF3362) J4N38_05530 PF04055 Radical SAM superfamily J4N38_05530 PF08497 Radical SAM N-terminal J4N38_05535 PF00563 EAL domain J4N38_05535 PF00990 Diguanylate cyclase, GGDEF domain J4N38_05535 PF03707 Bacterial signalling protein N terminal repeat J4N38_05550 PF03466 LysR substrate binding domain J4N38_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_05555 PF01717 Cobalamin-independent synthase, Catalytic domain J4N38_05555 PF08267 Cobalamin-independent synthase, N-terminal domain J4N38_05565 PF02566 OsmC-like protein J4N38_05570 PF01047 MarR family J4N38_05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_05580 PF03466 LysR substrate binding domain J4N38_05605 PF02627 Carboxymuconolactone decarboxylase family J4N38_05630 PF04116 Fatty acid hydroxylase superfamily J4N38_05640 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4N38_05640 PF12833 Helix-turn-helix domain J4N38_05655 PF00012 Hsp70 protein J4N38_05660 PF00012 Hsp70 protein J4N38_05695 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N38_05695 PF00270 DEAD/DEAH box helicase J4N38_05695 PF11898 Domain of unknown function (DUF3418) J4N38_05695 PF04408 Helicase associated domain (HA2) J4N38_05695 PF00271 Helicase conserved C-terminal domain J4N38_05710 PF00290 Tryptophan synthase alpha chain J4N38_05715 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_05720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4N38_05720 PF00218 Indole-3-glycerol phosphate synthase J4N38_05725 PF00591 Glycosyl transferase family, a/b domain J4N38_05725 PF02885 Glycosyl transferase family, helical bundle domain J4N38_05730 PF00117 Glutamine amidotransferase class-I J4N38_05735 PF00425 chorismate binding enzyme J4N38_05735 PF04715 Anthranilate synthase component I, N terminal region J4N38_05740 PF08056 Tryptophan operon leader peptide J4N38_05745 PF02811 PHP domain J4N38_05750 PF01300 Telomere recombination J4N38_05760 PF03707 Bacterial signalling protein N terminal repeat J4N38_05760 PF00563 EAL domain J4N38_05760 PF00990 Diguanylate cyclase, GGDEF domain J4N38_05765 PF01479 S4 domain J4N38_05765 PF00849 RNA pseudouridylate synthase J4N38_05770 PF02567 Phenazine biosynthesis-like protein J4N38_05775 PF00005 ABC transporter J4N38_05775 PF00664 ABC transporter transmembrane region J4N38_05780 PF00664 ABC transporter transmembrane region J4N38_05780 PF00005 ABC transporter J4N38_05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_05795 PF00266 Aminotransferase class-V J4N38_05800 PF00675 Insulinase (Peptidase family M16) J4N38_05800 PF05193 Peptidase M16 inactive domain J4N38_05810 PF02698 DUF218 domain J4N38_05820 PF00390 Malic enzyme, N-terminal domain J4N38_05820 PF03949 Malic enzyme, NAD binding domain J4N38_05825 PF04408 Helicase associated domain (HA2) J4N38_05825 PF11898 Domain of unknown function (DUF3418) J4N38_05825 PF00270 DEAD/DEAH box helicase J4N38_05825 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N38_05825 PF00271 Helicase conserved C-terminal domain J4N38_05840 PF00155 Aminotransferase class I and II J4N38_05845 PF00672 HAMP domain J4N38_05845 PF01966 HD domain J4N38_05855 PF00155 Aminotransferase class I and II J4N38_05855 PF00392 Bacterial regulatory proteins, gntR family J4N38_05865 PF01336 OB-fold nucleic acid binding domain J4N38_05865 PF00152 tRNA synthetases class II (D, K and N) J4N38_05870 PF00672 HAMP domain J4N38_05870 PF12729 Four helix bundle sensory module for signal transduction J4N38_05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_05875 PF01242 6-pyruvoyl tetrahydropterin synthase J4N38_05880 PF03222 Tryptophan/tyrosine permease family J4N38_05890 PF03315 Serine dehydratase beta chain J4N38_05890 PF03313 Serine dehydratase alpha chain J4N38_05895 PF03222 Tryptophan/tyrosine permease family J4N38_05900 PF00293 NUDIX domain J4N38_05910 PF00512 His Kinase A (phospho-acceptor) domain J4N38_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_05910 PF09308 LuxQ, periplasmic J4N38_05910 PF00072 Response regulator receiver domain J4N38_05915 PF04715 Anthranilate synthase component I, N terminal region J4N38_05915 PF00425 chorismate binding enzyme J4N38_05930 PF04317 YcjX-like family, DUF463 J4N38_05935 PF05128 Domain of unknown function (DUF697) J4N38_05940 PF00158 Sigma-54 interaction domain J4N38_05940 PF18024 Helix-turn-helix domain J4N38_05945 PF13302 Acetyltransferase (GNAT) domain J4N38_05965 PF00990 Diguanylate cyclase, GGDEF domain J4N38_05975 PF00925 GTP cyclohydrolase II J4N38_06000 PF03734 L,D-transpeptidase catalytic domain J4N38_06000 PF01471 Putative peptidoglycan binding domain J4N38_06005 PF05951 Bacterial protein of unknown function (DUF882) J4N38_06010 PF00753 Metallo-beta-lactamase superfamily J4N38_06025 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_06035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_06040 PF17200 Single Cache domain 2 J4N38_06040 PF07730 Histidine kinase J4N38_06045 PF00072 Response regulator receiver domain J4N38_06045 PF00196 Bacterial regulatory proteins, luxR family J4N38_06055 PF00210 Ferritin-like domain J4N38_06065 PF13520 Amino acid permease J4N38_06070 PF00892 EamA-like transporter family J4N38_06095 PF04229 GrpB protein J4N38_06105 PF14552 Tautomerase enzyme J4N38_06200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_06370 PF01042 Endoribonuclease L-PSP J4N38_06470 PF09905 DNA-binding protein VF530 J4N38_06680 PF01609 Transposase DDE domain J4N38_06680 PF13006 Insertion element 4 transposase N-terminal J4N38_06815 PF04229 GrpB protein J4N38_06855 PF07007 Lysozyme inhibitor LprI J4N38_06885 PF02567 Phenazine biosynthesis-like protein J4N38_07000 PF04229 GrpB protein J4N38_07075 PF02567 Phenazine biosynthesis-like protein J4N38_07130 PF01609 Transposase DDE domain J4N38_07130 PF13006 Insertion element 4 transposase N-terminal J4N38_07155 PF01810 LysE type translocator J4N38_07160 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J4N38_07165 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system J4N38_07185 PF02567 Phenazine biosynthesis-like protein J4N38_07260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_07265 PF04209 homogentisate 1,2-dioxygenase J4N38_07275 PF14497 Glutathione S-transferase, C-terminal domain J4N38_07275 PF02798 Glutathione S-transferase, N-terminal domain J4N38_07290 PF13488 Glycine zipper J4N38_07290 PF00691 OmpA family J4N38_07305 PF01565 FAD binding domain J4N38_07305 PF02913 FAD linked oxidases, C-terminal domain J4N38_07305 PF13183 4Fe-4S dicluster domain J4N38_07310 PF04191 Phospholipid methyltransferase J4N38_07320 PF00221 Aromatic amino acid lyase J4N38_07325 PF17391 Urocanase N-terminal domain J4N38_07325 PF01175 Urocanase Rossmann-like domain J4N38_07325 PF17392 Urocanase C-terminal domain J4N38_07330 PF00491 Arginase family J4N38_07335 PF01979 Amidohydrolase family J4N38_07340 PF07702 UTRA domain J4N38_07340 PF00392 Bacterial regulatory proteins, gntR family J4N38_07345 PF07070 SpoOM protein J4N38_07365 PF05724 Thiopurine S-methyltransferase (TPMT) J4N38_07370 PF02222 ATP-grasp domain J4N38_07375 PF11871 Domain of unknown function (DUF3391) J4N38_07375 PF01966 HD domain J4N38_07380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_07380 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_07385 PF04172 LrgB-like family J4N38_07390 PF03788 LrgA family J4N38_07395 PF08411 Exonuclease C-terminal J4N38_07395 PF00929 Exonuclease J4N38_07400 PF00375 Sodium:dicarboxylate symporter family J4N38_07405 PF13460 NAD(P)H-binding J4N38_07410 PF01613 Flavin reductase like domain J4N38_07415 PF02277 Phosphoribosyltransferase J4N38_07420 PF02654 Cobalamin-5-phosphate synthase J4N38_07435 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_07440 PF01032 FecCD transport family J4N38_07445 PF00005 ABC transporter J4N38_07455 PF00990 Diguanylate cyclase, GGDEF domain J4N38_07470 PF03466 LysR substrate binding domain J4N38_07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_07475 PF00005 ABC transporter J4N38_07485 PF09308 LuxQ, periplasmic J4N38_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_07485 PF00512 His Kinase A (phospho-acceptor) domain J4N38_07485 PF00072 Response regulator receiver domain J4N38_07495 PF01863 Protein of unknown function DUF45 J4N38_07500 PF05971 RNA methyltransferase J4N38_07515 PF00561 alpha/beta hydrolase fold J4N38_07515 PF00364 Biotin-requiring enzyme J4N38_07520 PF04204 Homoserine O-succinyltransferase J4N38_07535 PF12792 CSS motif domain associated with EAL J4N38_07535 PF00563 EAL domain J4N38_07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_07560 PF01970 Tripartite tricarboxylate transporter TctA family J4N38_07575 PF00069 Protein kinase domain J4N38_07590 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N38_07620 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_07620 PF07724 AAA domain (Cdc48 subfamily) J4N38_07620 PF17871 AAA lid domain J4N38_07620 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_07645 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N38_07675 PF06715 Gp5 C-terminal repeat (3 copies) J4N38_07675 PF04717 Type VI secretion system, phage-baseplate injector J4N38_07695 PF00285 Citrate synthase, C-terminal domain J4N38_07700 PF00330 Aconitase family (aconitate hydratase) J4N38_07700 PF00694 Aconitase C-terminal domain J4N38_07705 PF04303 PrpF protein J4N38_07710 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N38_07710 PF00501 AMP-binding enzyme J4N38_07710 PF13193 AMP-binding enzyme C-terminal domain J4N38_07730 PF04055 Radical SAM superfamily J4N38_07735 PF06508 Queuosine biosynthesis protein QueC J4N38_07750 PF00691 OmpA family J4N38_07750 PF05736 OprF membrane domain J4N38_07765 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_07765 PF17785 PUA-like domain J4N38_07770 PF12729 Four helix bundle sensory module for signal transduction J4N38_07770 PF00672 HAMP domain J4N38_07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_07775 PF00708 Acylphosphatase J4N38_07780 PF04358 DsrC like protein J4N38_07785 PF01027 Inhibitor of apoptosis-promoting Bax1 J4N38_07790 PF00005 ABC transporter J4N38_07795 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_07800 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_07805 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_07810 PF10414 Sirohaem synthase dimerisation region J4N38_07810 PF14824 Sirohaem biosynthesis protein central J4N38_07810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_07815 PF04461 Protein of unknown function (DUF520) J4N38_07820 PF00793 DAHP synthetase I family J4N38_07825 PF05524 PEP-utilising enzyme, N-terminal J4N38_07825 PF00391 PEP-utilising enzyme, mobile domain J4N38_07825 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_07845 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J4N38_07845 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J4N38_07845 PF01189 16S rRNA methyltransferase RsmB/F J4N38_07850 PF02470 MlaD protein J4N38_07855 PF04403 Paraquat-inducible protein A J4N38_07860 PF00664 ABC transporter transmembrane region J4N38_07860 PF00005 ABC transporter J4N38_07865 PF13185 GAF domain J4N38_07870 PF04352 ProQ/FINO family J4N38_07870 PF17516 ProQ C-terminal domain J4N38_07875 PF11818 C-terminal domain of tail specific protease (DUF3340) J4N38_07875 PF00595 PDZ domain J4N38_07875 PF17804 Tail specific protease N-terminal domain J4N38_07875 PF03572 Peptidase family S41 J4N38_07885 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4N38_07885 PF01433 Peptidase family M1 domain J4N38_07885 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4N38_07895 PF05088 Bacterial NAD-glutamate dehydrogenase J4N38_07900 PF01180 Dihydroorotate dehydrogenase J4N38_07905 PF07126 Cell-division protein ZapC J4N38_07910 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_07910 PF02926 THUMP domain J4N38_07910 PF01170 Putative RNA methylase family UPF0020 J4N38_07920 PF12848 ABC transporter J4N38_07920 PF00005 ABC transporter J4N38_07920 PF16326 ABC transporter C-terminal domain J4N38_07930 PF04957 Ribosome modulation factor J4N38_07935 PF07977 FabA-like domain J4N38_07940 PF13654 AAA domain J4N38_07940 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_07945 PF06303 MatP N-terminal domain J4N38_07945 PF17414 MatP C-terminal ribbon-helix-helix domain J4N38_07965 PF07968 Leukocidin/Hemolysin toxin family J4N38_07965 PF00652 Ricin-type beta-trefoil lectin domain J4N38_07980 PF01565 FAD binding domain J4N38_07980 PF04030 D-arabinono-1,4-lactone oxidase J4N38_07990 PF12729 Four helix bundle sensory module for signal transduction J4N38_07990 PF00672 HAMP domain J4N38_07990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_07995 PF00842 Alanine racemase, C-terminal domain J4N38_07995 PF01168 Alanine racemase, N-terminal domain J4N38_08135 PF00753 Metallo-beta-lactamase superfamily J4N38_08150 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_08165 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4N38_08165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N38_08175 PF00403 Heavy-metal-associated domain J4N38_08190 PF00027 Cyclic nucleotide-binding domain J4N38_08190 PF13545 Crp-like helix-turn-helix domain J4N38_08195 PF00582 Universal stress protein family J4N38_08200 PF01171 PP-loop family J4N38_08220 PF00005 ABC transporter J4N38_08220 PF08402 TOBE domain J4N38_08225 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_08230 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_08235 PF13416 Bacterial extracellular solute-binding protein J4N38_08240 PF13416 Bacterial extracellular solute-binding protein J4N38_08245 PF00990 Diguanylate cyclase, GGDEF domain J4N38_08245 PF17155 Gammaproteobacterial periplasmic sensor domain J4N38_08250 PF02146 Sir2 family J4N38_08255 PF02743 Cache domain J4N38_08255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_08255 PF00672 HAMP domain J4N38_08260 PF01551 Peptidase family M23 J4N38_08265 PF03466 LysR substrate binding domain J4N38_08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_08280 PF03591 AzlC protein J4N38_08315 PF00005 ABC transporter J4N38_08315 PF12848 ABC transporter J4N38_08325 PF04542 Sigma-70 region 2 J4N38_08325 PF08281 Sigma-70, region 4 J4N38_08335 PF12727 PBP superfamily domain J4N38_08335 PF12728 Helix-turn-helix domain J4N38_08340 PF12804 MobA-like NTP transferase domain J4N38_08345 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J4N38_08375 PF00480 ROK family J4N38_08380 PF03942 DTW domain J4N38_08390 PF00672 HAMP domain J4N38_08390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_08390 PF17202 Single cache domain 3 J4N38_08395 PF00877 NlpC/P60 family J4N38_08405 PF03881 Fructosamine kinase J4N38_08415 PF00677 Lumazine binding domain J4N38_08420 PF01554 MatE J4N38_08460 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N38_08460 PF00672 HAMP domain J4N38_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_08460 PF00512 His Kinase A (phospho-acceptor) domain J4N38_08460 PF01627 Hpt domain J4N38_08460 PF00072 Response regulator receiver domain J4N38_08465 PF02954 Bacterial regulatory protein, Fis family J4N38_08465 PF00072 Response regulator receiver domain J4N38_08465 PF00158 Sigma-54 interaction domain J4N38_08475 PF00534 Glycosyl transferases group 1 J4N38_08475 PF13439 Glycosyltransferase Family 4 J4N38_08510 PF13439 Glycosyltransferase Family 4 J4N38_08510 PF00534 Glycosyl transferases group 1 J4N38_08520 PF02397 Bacterial sugar transferase J4N38_08545 PF01420 Type I restriction modification DNA specificity domain J4N38_08550 PF02384 N-6 DNA Methylase J4N38_08555 PF08463 EcoEI R protein C-terminal J4N38_08555 PF00271 Helicase conserved C-terminal domain J4N38_08555 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4N38_08555 PF04851 Type III restriction enzyme, res subunit J4N38_08600 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_08620 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J4N38_08630 PF00593 TonB dependent receptor J4N38_08630 PF07715 TonB-dependent Receptor Plug Domain J4N38_08635 PF00550 Phosphopantetheine attachment site J4N38_08635 PF00668 Condensation domain J4N38_08635 PF13193 AMP-binding enzyme C-terminal domain J4N38_08635 PF00501 AMP-binding enzyme J4N38_08640 PF00501 AMP-binding enzyme J4N38_08640 PF13193 AMP-binding enzyme C-terminal domain J4N38_08640 PF00668 Condensation domain J4N38_08640 PF00550 Phosphopantetheine attachment site J4N38_08645 PF03621 MbtH-like protein J4N38_08650 PF00005 ABC transporter J4N38_08655 PF01032 FecCD transport family J4N38_08660 PF01497 Periplasmic binding protein J4N38_08665 PF00005 ABC transporter J4N38_08670 PF17837 4'-phosphopantetheinyl transferase N-terminal domain J4N38_08670 PF01648 4'-phosphopantetheinyl transferase superfamily J4N38_08675 PF02595 Glycerate kinase family J4N38_08680 PF05651 Putative sugar diacid recognition J4N38_08680 PF17853 GGDEF-like domain J4N38_08680 PF13556 PucR C-terminal helix-turn-helix domain J4N38_08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_08685 PF03466 LysR substrate binding domain J4N38_08695 PF13006 Insertion element 4 transposase N-terminal J4N38_08695 PF01609 Transposase DDE domain J4N38_08700 PF06629 MltA-interacting protein MipA J4N38_08705 PF00512 His Kinase A (phospho-acceptor) domain J4N38_08705 PF00672 HAMP domain J4N38_08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_08710 PF00072 Response regulator receiver domain J4N38_08710 PF00486 Transcriptional regulatory protein, C terminal J4N38_08725 PF10414 Sirohaem synthase dimerisation region J4N38_08725 PF14824 Sirohaem biosynthesis protein central J4N38_08725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_08730 PF01226 Formate/nitrite transporter J4N38_08735 PF13806 Rieske-like [2Fe-2S] domain J4N38_08740 PF04324 BFD-like [2Fe-2S] binding domain J4N38_08740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_08740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_08740 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N38_08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_08745 PF08448 PAS fold J4N38_08745 PF00990 Diguanylate cyclase, GGDEF domain J4N38_08750 PF07687 Peptidase dimerisation domain J4N38_08750 PF01546 Peptidase family M20/M25/M40 J4N38_08775 PF13302 Acetyltransferase (GNAT) domain J4N38_08780 PF13673 Acetyltransferase (GNAT) domain J4N38_08825 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4N38_08845 PF12431 Transcriptional regulator J4N38_08845 PF00072 Response regulator receiver domain J4N38_08850 PF17203 Single cache domain 3 J4N38_08850 PF00989 PAS fold J4N38_08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_08850 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4N38_08865 PF03544 Gram-negative bacterial TonB protein C-terminal J4N38_08870 PF02472 Biopolymer transport protein ExbD/TolR J4N38_08875 PF01618 MotA/TolQ/ExbB proton channel family J4N38_08880 PF01618 MotA/TolQ/ExbB proton channel family J4N38_08905 PF01259 SAICAR synthetase J4N38_08915 PF04055 Radical SAM superfamily J4N38_08920 PF11230 Protein of unknown function (DUF3029) J4N38_08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_08925 PF00672 HAMP domain J4N38_08930 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N38_08930 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N38_08940 PF00317 Ribonucleotide reductase, all-alpha domain J4N38_08940 PF02867 Ribonucleotide reductase, barrel domain J4N38_08940 PF03477 ATP cone domain J4N38_08945 PF00268 Ribonucleotide reductase, small chain J4N38_08950 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_08960 PF00994 Probable molybdopterin binding domain J4N38_08975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_08980 PF16653 Saccharopine dehydrogenase C-terminal domain J4N38_08980 PF03435 Saccharopine dehydrogenase NADP binding domain J4N38_08985 PF00202 Aminotransferase class-III J4N38_08995 PF03422 Carbohydrate binding module (family 6) J4N38_08995 PF02412 Thrombospondin type 3 repeat J4N38_09000 PF06965 Na+/H+ antiporter 1 J4N38_09010 PF02687 FtsX-like permease family J4N38_09010 PF12704 MacB-like periplasmic core domain J4N38_09015 PF00005 ABC transporter J4N38_09020 PF01554 MatE J4N38_09025 PF13460 NAD(P)H-binding J4N38_09025 PF11066 Protein of unknown function (DUF2867) J4N38_09035 PF07690 Major Facilitator Superfamily J4N38_09040 PF00849 RNA pseudouridylate synthase J4N38_09040 PF01479 S4 domain J4N38_09045 PF04851 Type III restriction enzyme, res subunit J4N38_09045 PF00271 Helicase conserved C-terminal domain J4N38_09055 PF00072 Response regulator receiver domain J4N38_09055 PF00486 Transcriptional regulatory protein, C terminal J4N38_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_09085 PF00873 AcrB/AcrD/AcrF family J4N38_09090 PF13533 Biotin-lipoyl like J4N38_09105 PF00535 Glycosyl transferase family 2 J4N38_09110 PF01386 Ribosomal L25p family J4N38_09115 PF00717 Peptidase S24-like J4N38_09120 PF13438 Domain of unknown function (DUF4113) J4N38_09120 PF00817 impB/mucB/samB family J4N38_09120 PF11799 impB/mucB/samB family C-terminal domain J4N38_09125 PF00579 tRNA synthetases class I (W and Y) J4N38_09155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N38_09175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_09175 PF03466 LysR substrate binding domain J4N38_09180 PF13533 Biotin-lipoyl like J4N38_09185 PF07690 Major Facilitator Superfamily J4N38_09205 PF01327 Polypeptide deformylase J4N38_09210 PF00958 GMP synthase C terminal domain J4N38_09210 PF03352 Methyladenine glycosylase J4N38_09210 PF13302 Acetyltransferase (GNAT) domain J4N38_09210 PF00117 Glutamine amidotransferase class-I J4N38_09210 PF13673 Acetyltransferase (GNAT) domain J4N38_09220 PF02264 LamB porin J4N38_09225 PF08212 Lipocalin-like domain J4N38_09235 PF08274 PhnA Zinc-Ribbon J4N38_09235 PF03831 PhnA domain J4N38_09250 PF13495 Phage integrase, N-terminal SAM-like domain J4N38_09250 PF00589 Phage integrase family J4N38_09260 PF00563 EAL domain J4N38_09260 PF03707 Bacterial signalling protein N terminal repeat J4N38_09260 PF00990 Diguanylate cyclase, GGDEF domain J4N38_09285 PF01235 Sodium:alanine symporter family J4N38_09290 PF01810 LysE type translocator J4N38_09295 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4N38_09300 PF02581 Thiamine monophosphate synthase J4N38_09315 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_09325 PF00171 Aldehyde dehydrogenase family J4N38_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_09335 PF03466 LysR substrate binding domain J4N38_09340 PF00561 alpha/beta hydrolase fold J4N38_09355 PF00815 Histidinol dehydrogenase J4N38_09360 PF03328 HpcH/HpaI aldolase/citrate lyase family J4N38_09365 PF00356 Bacterial regulatory proteins, lacI family J4N38_09370 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_09380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_09380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_09395 PF00474 Sodium:solute symporter family J4N38_09400 PF00356 Bacterial regulatory proteins, lacI family J4N38_09415 PF00313 'Cold-shock' DNA-binding domain J4N38_09440 PF02321 Outer membrane efflux protein J4N38_09445 PF03150 Di-haem cytochrome c peroxidase J4N38_09445 PF00034 Cytochrome c J4N38_09445 PF14376 Haem-binding domain J4N38_09450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_09450 PF09308 LuxQ, periplasmic J4N38_09450 PF00072 Response regulator receiver domain J4N38_09450 PF00512 His Kinase A (phospho-acceptor) domain J4N38_09460 PF00440 Bacterial regulatory proteins, tetR family J4N38_09465 PF01565 FAD binding domain J4N38_09465 PF09330 D-lactate dehydrogenase, membrane binding J4N38_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_09470 PF03466 LysR substrate binding domain J4N38_09475 PF01554 MatE J4N38_09485 PF00356 Bacterial regulatory proteins, lacI family J4N38_09485 PF13407 Periplasmic binding protein domain J4N38_09490 PF00294 pfkB family carbohydrate kinase J4N38_09530 PF03483 B3/4 domain J4N38_09530 PF03484 tRNA synthetase B5 domain J4N38_09530 PF03147 Ferredoxin-fold anticodon binding domain J4N38_09530 PF01588 Putative tRNA binding domain J4N38_09530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4N38_09535 PF01409 tRNA synthetases class II core domain (F) J4N38_09535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4N38_09560 PF07995 Glucose / Sorbosone dehydrogenase J4N38_09570 PF00512 His Kinase A (phospho-acceptor) domain J4N38_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_09585 PF04994 TfoX C-terminal domain J4N38_09585 PF04993 TfoX N-terminal domain J4N38_09595 PF03956 Lysine exporter LysO J4N38_09605 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4N38_09610 PF01418 Helix-turn-helix domain, rpiR family J4N38_09610 PF01380 SIS domain J4N38_09615 PF00465 Iron-containing alcohol dehydrogenase J4N38_09615 PF00171 Aldehyde dehydrogenase family J4N38_09620 PF00462 Glutaredoxin J4N38_09625 PF06826 Predicted Permease Membrane Region J4N38_09625 PF02080 TrkA-C domain J4N38_09630 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_09635 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_09640 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_09645 PF00005 ABC transporter J4N38_09655 PF01228 Glycine radical J4N38_09655 PF02901 Pyruvate formate lyase-like J4N38_09665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_09665 PF00672 HAMP domain J4N38_09670 PF04055 Radical SAM superfamily J4N38_09680 PF03887 YfbU domain J4N38_09685 PF06798 PrkA serine protein kinase C-terminal domain J4N38_09685 PF08298 PrkA AAA domain J4N38_09690 PF04285 Protein of unknown function (DUF444) J4N38_09695 PF04293 SpoVR like protein J4N38_09700 PF02348 Cytidylyltransferase J4N38_09705 PF03966 Trm112p-like protein J4N38_09710 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4N38_09715 PF00005 ABC transporter J4N38_09715 PF00664 ABC transporter transmembrane region J4N38_09720 PF00753 Metallo-beta-lactamase superfamily J4N38_09720 PF03772 Competence protein J4N38_09730 PF12704 MacB-like periplasmic core domain J4N38_09730 PF02687 FtsX-like permease family J4N38_09735 PF00005 ABC transporter J4N38_09740 PF12704 MacB-like periplasmic core domain J4N38_09740 PF02687 FtsX-like permease family J4N38_09750 PF17757 UvrB interaction domain J4N38_09750 PF00270 DEAD/DEAH box helicase J4N38_09750 PF02559 CarD-like/TRCF domain J4N38_09750 PF00271 Helicase conserved C-terminal domain J4N38_09750 PF03461 TRCF domain J4N38_09765 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_09770 PF05728 Uncharacterised protein family (UPF0227) J4N38_09780 PF13036 Peptidoglycan-synthase activator LpoB J4N38_09780 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4N38_09795 PF01230 HIT domain J4N38_09800 PF00672 HAMP domain J4N38_09800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_09810 PF00392 Bacterial regulatory proteins, gntR family J4N38_09810 PF07840 FadR C-terminal domain J4N38_09815 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J4N38_09820 PF02600 Disulfide bond formation protein DsbB J4N38_09825 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4N38_09825 PF17854 FtsK alpha domain J4N38_09825 PF09397 Ftsk gamma domain J4N38_09825 PF01580 FtsK/SpoIIIE family J4N38_09830 PF01037 Lrp/AsnC ligand binding domain J4N38_09835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N38_09835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N38_09840 PF04217 Protein of unknown function, DUF412 J4N38_09845 PF00871 Acetokinase family J4N38_09850 PF07085 DRTGG domain J4N38_09850 PF01515 Phosphate acetyl/butaryl transferase J4N38_09855 PF13409 Glutathione S-transferase, N-terminal domain J4N38_09860 PF00005 ABC transporter J4N38_09860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_09865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_09865 PF00005 ABC transporter J4N38_09870 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_09870 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_09875 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_09880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_09890 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_09900 PF02743 Cache domain J4N38_09900 PF00672 HAMP domain J4N38_09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_09905 PF04389 Peptidase family M28 J4N38_09905 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_09910 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_09910 PF05922 Peptidase inhibitor I9 J4N38_09910 PF00082 Subtilase family J4N38_09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_09915 PF00672 HAMP domain J4N38_09915 PF02743 Cache domain J4N38_09940 PF00005 ABC transporter J4N38_09940 PF02687 FtsX-like permease family J4N38_09940 PF12704 MacB-like periplasmic core domain J4N38_09945 PF00005 ABC transporter J4N38_09945 PF02687 FtsX-like permease family J4N38_09945 PF12704 MacB-like periplasmic core domain J4N38_09950 PF12704 MacB-like periplasmic core domain J4N38_09950 PF02687 FtsX-like permease family J4N38_09960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_09965 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_09965 PF03413 Peptidase propeptide and YPEB domain J4N38_09965 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_09965 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_09965 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_09975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N38_09975 PF00326 Prolyl oligopeptidase family J4N38_09990 PF00535 Glycosyl transferase family 2 J4N38_10040 PF01544 CorA-like Mg2+ transporter protein J4N38_10065 PF00990 Diguanylate cyclase, GGDEF domain J4N38_10075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N38_10080 PF09619 Type III secretion system lipoprotein chaperone (YscW) J4N38_10090 PF01037 Lrp/AsnC ligand binding domain J4N38_10090 PF13404 AsnC-type helix-turn-helix domain J4N38_10095 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_10115 PF07690 Major Facilitator Superfamily J4N38_10120 PF03601 Conserved hypothetical protein 698 J4N38_10130 PF00501 AMP-binding enzyme J4N38_10130 PF13193 AMP-binding enzyme C-terminal domain J4N38_10135 PF13378 Enolase C-terminal domain-like J4N38_10140 PF00378 Enoyl-CoA hydratase/isomerase J4N38_10145 PF12697 Alpha/beta hydrolase family J4N38_10150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_10150 PF16582 Middle domain of thiamine pyrophosphate J4N38_10150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_10155 PF00425 chorismate binding enzyme J4N38_10160 PF00155 Aminotransferase class I and II J4N38_10170 PF01966 HD domain J4N38_10170 PF13286 Phosphohydrolase-associated domain J4N38_10175 PF00962 Adenosine/AMP deaminase J4N38_10190 PF00271 Helicase conserved C-terminal domain J4N38_10190 PF00270 DEAD/DEAH box helicase J4N38_10200 PF08496 Peptidase family S49 N-terminal J4N38_10200 PF01343 Peptidase family S49 J4N38_10205 PF00106 short chain dehydrogenase J4N38_10210 PF02887 Pyruvate kinase, alpha/beta domain J4N38_10210 PF00224 Pyruvate kinase, barrel domain J4N38_10215 PF00480 ROK family J4N38_10220 PF01584 CheW-like domain J4N38_10220 PF00072 Response regulator receiver domain J4N38_10225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4N38_10235 PF00384 Molybdopterin oxidoreductase J4N38_10235 PF18364 Molybdopterin oxidoreductase N-terminal domain J4N38_10235 PF01568 Molydopterin dinucleotide binding domain J4N38_10240 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N38_10245 PF06796 Periplasmic nitrate reductase protein NapE J4N38_10250 PF03649 Uncharacterised protein family (UPF0014) J4N38_10260 PF01226 Formate/nitrite transporter J4N38_10285 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_10285 PF07724 AAA domain (Cdc48 subfamily) J4N38_10285 PF17871 AAA lid domain J4N38_10285 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_10285 PF02861 Clp amino terminal domain, pathogenicity island component J4N38_10290 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4N38_10295 PF00313 'Cold-shock' DNA-binding domain J4N38_10300 PF03971 Monomeric isocitrate dehydrogenase J4N38_10305 PF00849 RNA pseudouridylate synthase J4N38_10310 PF02938 GAD domain J4N38_10310 PF00152 tRNA synthetases class II (D, K and N) J4N38_10310 PF01336 OB-fold nucleic acid binding domain J4N38_10315 PF01904 Protein of unknown function DUF72 J4N38_10320 PF13649 Methyltransferase domain J4N38_10325 PF08003 Protein of unknown function (DUF1698) J4N38_10330 PF08443 RimK-like ATP-grasp domain J4N38_10330 PF18030 RimK PreATP-grasp domain J4N38_10345 PF16330 MukB hinge domain J4N38_10345 PF04310 MukB N-terminal J4N38_10350 PF04288 MukE-like family J4N38_10355 PF17193 MukF C-terminal domain J4N38_10355 PF17192 MukF middle domain J4N38_10355 PF03882 MukF winged-helix domain J4N38_10360 PF13847 Methyltransferase domain J4N38_10365 PF02698 DUF218 domain J4N38_10370 PF00072 Response regulator receiver domain J4N38_10370 PF00486 Transcriptional regulatory protein, C terminal J4N38_10375 PF02613 Nitrate reductase delta subunit J4N38_10380 PF00356 Bacterial regulatory proteins, lacI family J4N38_10385 PF04993 TfoX N-terminal domain J4N38_10385 PF04994 TfoX C-terminal domain J4N38_10390 PF13006 Insertion element 4 transposase N-terminal J4N38_10390 PF01609 Transposase DDE domain J4N38_10410 PF00534 Glycosyl transferases group 1 J4N38_10410 PF08323 Starch synthase catalytic domain J4N38_10415 PF00483 Nucleotidyl transferase J4N38_10420 PF08272 Topoisomerase I zinc-ribbon-like J4N38_10420 PF01131 DNA topoisomerase J4N38_10420 PF01751 Toprim domain J4N38_10420 PF01396 Topoisomerase DNA binding C4 zinc finger J4N38_10425 PF10692 Protein of unknown function (DUF2498) J4N38_10430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N38_10440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4N38_10445 PF04377 Arginine-tRNA-protein transferase, C terminus J4N38_10445 PF04376 Arginine-tRNA-protein transferase, N terminus J4N38_10450 PF01176 Translation initiation factor 1A / IF-1 J4N38_10455 PF00265 Thymidine kinase J4N38_10460 PF01406 tRNA synthetases class I (C) catalytic domain J4N38_10460 PF09190 DALR domain J4N38_10465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N38_10470 PF00149 Calcineurin-like phosphoesterase J4N38_10475 PF08668 HDOD domain J4N38_10475 PF00563 EAL domain J4N38_10480 PF02810 SEC-C motif J4N38_10485 PF07023 Protein of unknown function (DUF1315) J4N38_10495 PF01641 SelR domain J4N38_10500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_10500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_10505 PF01263 Aldose 1-epimerase J4N38_10510 PF13847 Methyltransferase domain J4N38_10525 PF00245 Alkaline phosphatase J4N38_10530 PF00196 Bacterial regulatory proteins, luxR family J4N38_10530 PF03472 Autoinducer binding domain J4N38_10540 PF07690 Major Facilitator Superfamily J4N38_10550 PF00970 Oxidoreductase FAD-binding domain J4N38_10550 PF00175 Oxidoreductase NAD-binding domain J4N38_10555 PF03692 Putative zinc- or iron-chelating domain J4N38_10565 PF03692 Putative zinc- or iron-chelating domain J4N38_10570 PF13406 Transglycosylase SLT domain J4N38_10575 PF05166 YcgL domain J4N38_10580 PF03775 Septum formation inhibitor MinC, C-terminal domain J4N38_10580 PF05209 Septum formation inhibitor MinC, N-terminal domain J4N38_10585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_10590 PF03776 Septum formation topological specificity factor MinE J4N38_10595 PF00465 Iron-containing alcohol dehydrogenase J4N38_10595 PF00171 Aldehyde dehydrogenase family J4N38_10600 PF01914 MarC family integral membrane protein J4N38_10605 PF00027 Cyclic nucleotide-binding domain J4N38_10605 PF00520 Ion transport protein J4N38_10610 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_10610 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_10615 PF03553 Na+/H+ antiporter family J4N38_10620 PF07702 UTRA domain J4N38_10620 PF00392 Bacterial regulatory proteins, gntR family J4N38_10625 PF00367 phosphotransferase system, EIIB J4N38_10625 PF02378 Phosphotransferase system, EIIC J4N38_10630 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4N38_10630 PF08244 Glycosyl hydrolases family 32 C terminal J4N38_10640 PF04245 37-kD nucleoid-associated bacterial protein J4N38_10645 PF07208 Protein of unknown function (DUF1414) J4N38_10650 PF00884 Sulfatase J4N38_10650 PF11893 Domain of unknown function (DUF3413) J4N38_10670 PF00293 NUDIX domain J4N38_10670 PF13344 Haloacid dehalogenase-like hydrolase J4N38_10675 PF00850 Histone deacetylase domain J4N38_10680 PF00106 short chain dehydrogenase J4N38_10685 PF01161 Phosphatidylethanolamine-binding protein J4N38_10695 PF01131 DNA topoisomerase J4N38_10695 PF01751 Toprim domain J4N38_10700 PF00462 Glutaredoxin J4N38_10705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N38_10705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N38_10720 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N38_10725 PF12557 Cob(I)alamin adenosyltransferase N terminal J4N38_10725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4N38_10745 PF01266 FAD dependent oxidoreductase J4N38_10745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N38_10755 PF05378 Hydantoinase/oxoprolinase N-terminal region J4N38_10755 PF01968 Hydantoinase/oxoprolinase J4N38_10765 PF09261 Alpha mannosidase middle domain J4N38_10765 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain J4N38_10765 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 J4N38_10765 PF07748 Glycosyl hydrolases family 38 C-terminal domain J4N38_10765 PF01074 Glycosyl hydrolases family 38 N-terminal domain J4N38_10770 PF00480 ROK family J4N38_10775 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase J4N38_10785 PF00480 ROK family J4N38_10790 PF05170 AsmA family J4N38_10795 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_10800 PF10609 NUBPL iron-transfer P-loop NTPase J4N38_10805 PF09334 tRNA synthetases class I (M) J4N38_10805 PF01588 Putative tRNA binding domain J4N38_10815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N38_10815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_10820 PF01048 Phosphorylase superfamily J4N38_10825 PF00403 Heavy-metal-associated domain J4N38_10830 PF01554 MatE J4N38_10835 PF01368 DHH family J4N38_10835 PF02272 DHHA1 domain J4N38_10835 PF01743 Poly A polymerase head domain J4N38_10835 PF00571 CBS domain J4N38_10845 PF00990 Diguanylate cyclase, GGDEF domain J4N38_10850 PF02391 MoaE protein J4N38_10855 PF02597 ThiS family J4N38_10860 PF01967 MoaC family J4N38_10865 PF00994 Probable molybdopterin binding domain J4N38_10870 PF06463 Molybdenum Cofactor Synthesis C J4N38_10870 PF04055 Radical SAM superfamily J4N38_10875 PF01933 Uncharacterised protein family UPF0052 J4N38_10880 PF01627 Hpt domain J4N38_10885 PF02954 Bacterial regulatory protein, Fis family J4N38_10885 PF00072 Response regulator receiver domain J4N38_10885 PF00158 Sigma-54 interaction domain J4N38_10890 PF00271 Helicase conserved C-terminal domain J4N38_10890 PF17757 UvrB interaction domain J4N38_10890 PF12344 Ultra-violet resistance protein B J4N38_10890 PF02151 UvrB/uvrC motif J4N38_10890 PF04851 Type III restriction enzyme, res subunit J4N38_10920 PF04225 Opacity-associated protein A LysM-like domain J4N38_10920 PF01551 Peptidase family M23 J4N38_10935 PF18269 T3SS EscN ATPase C-terminal domain J4N38_10935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_10945 PF01706 FliG C-terminal domain J4N38_10945 PF14841 FliG middle domain J4N38_10945 PF14842 FliG N-terminal domain J4N38_10950 PF08345 Flagellar M-ring protein C-terminal J4N38_10950 PF01514 Secretory protein of YscJ/FliF family J4N38_10955 PF02049 Flagellar hook-basal body complex protein FliE J4N38_10960 PF02954 Bacterial regulatory protein, Fis family J4N38_10960 PF00158 Sigma-54 interaction domain J4N38_10960 PF00072 Response regulator receiver domain J4N38_10965 PF04972 BON domain J4N38_10965 PF00691 OmpA family J4N38_10975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_10980 PF00813 FliP family J4N38_10985 PF01313 Bacterial export proteins, family 3 J4N38_10990 PF01311 Bacterial export proteins, family 1 J4N38_10995 PF01312 FlhB HrpN YscU SpaS Family J4N38_11000 PF00771 FHIPEP family J4N38_11010 PF00669 Bacterial flagellin N-terminal helical region J4N38_11010 PF00700 Bacterial flagellin C-terminal helical region J4N38_11015 PF07195 Flagellar hook-associated protein 2 C-terminus J4N38_11015 PF02465 Flagellar hook-associated protein 2 N-terminus J4N38_11015 PF07196 Flagellin hook IN motif J4N38_11020 PF02561 Flagellar protein FliS J4N38_11035 PF03748 Flagellar basal body-associated protein FliL J4N38_11040 PF04542 Sigma-70 region 2 J4N38_11040 PF04545 Sigma-70, region 4 J4N38_11045 PF01618 MotA/TolQ/ExbB proton channel family J4N38_11050 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N38_11050 PF00691 OmpA family J4N38_11075 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N38_11075 PF10135 Rod binding protein J4N38_11080 PF02119 Flagellar P-ring protein J4N38_11085 PF02107 Flagellar L-ring protein J4N38_11090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11090 PF00460 Flagella basal body rod protein J4N38_11095 PF00460 Flagella basal body rod protein J4N38_11095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11100 PF07559 Flagellar basal body protein FlaE J4N38_11100 PF00460 Flagella basal body rod protein J4N38_11105 PF03963 Flagellar hook capping protein - N-terminal region J4N38_11105 PF13860 FlgD Ig-like domain J4N38_11105 PF13861 FlgD Tudor-like domain J4N38_11110 PF00460 Flagella basal body rod protein J4N38_11110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11115 PF00460 Flagella basal body rod protein J4N38_11135 PF01476 LysM domain J4N38_11135 PF01464 Transglycosylase SLT domain J4N38_11140 PF02508 Rnf-Nqr subunit, membrane protein J4N38_11145 PF04060 Putative Fe-S cluster J4N38_11150 PF13375 RnfC Barrel sandwich hybrid domain J4N38_11150 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4N38_11150 PF12838 4Fe-4S dicluster domain J4N38_11150 PF10531 SLBB domain J4N38_11155 PF03116 NQR2, RnfD, RnfE family J4N38_11160 PF04205 FMN-binding domain J4N38_11165 PF02508 Rnf-Nqr subunit, membrane protein J4N38_11170 PF10576 Iron-sulfur binding domain of endonuclease III J4N38_11170 PF00633 Helix-hairpin-helix motif J4N38_11170 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_11175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_11180 PF10952 Protein of unknown function (DUF2753) J4N38_11185 PF00691 OmpA family J4N38_11185 PF18393 MotY N-terminal domain J4N38_11190 PF00929 Exonuclease J4N38_11195 PF13726 Na+-H+ antiporter family J4N38_11195 PF03553 Na+/H+ antiporter family J4N38_11200 PF06804 NlpB/DapX lipoprotein J4N38_11205 PF00701 Dihydrodipicolinate synthetase family J4N38_11210 PF01842 ACT domain J4N38_11215 PF00578 AhpC/TSA family J4N38_11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_11220 PF00672 HAMP domain J4N38_11220 PF02743 Cache domain J4N38_11225 PF01594 AI-2E family transporter J4N38_11235 PF01435 Peptidase family M48 J4N38_11235 PF13181 Tetratricopeptide repeat J4N38_11240 PF03960 ArsC family J4N38_11245 PF03358 NADPH-dependent FMN reductase J4N38_11260 PF00860 Permease family J4N38_11265 PF04073 Aminoacyl-tRNA editing domain J4N38_11270 PF00149 Calcineurin-like phosphoesterase J4N38_11270 PF02872 5'-nucleotidase, C-terminal domain J4N38_11275 PF00793 DAHP synthetase I family J4N38_11280 PF13369 Transglutaminase-like superfamily J4N38_11290 PF17827 PrmC N-terminal domain J4N38_11290 PF13847 Methyltransferase domain J4N38_11295 PF03462 PCRF domain J4N38_11295 PF00472 RF-1 domain J4N38_11300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4N38_11300 PF01488 Shikimate / quinate 5-dehydrogenase J4N38_11300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4N38_11305 PF03550 Outer membrane lipoprotein LolB J4N38_11310 PF00288 GHMP kinases N terminal domain J4N38_11310 PF08544 GHMP kinases C terminal J4N38_11315 PF14572 Phosphoribosyl synthetase-associated domain J4N38_11315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4N38_11320 PF01195 Peptidyl-tRNA hydrolase J4N38_11325 PF01926 50S ribosome-binding GTPase J4N38_11325 PF06071 Protein of unknown function (DUF933) J4N38_11430 PF07196 Flagellin hook IN motif J4N38_11430 PF00669 Bacterial flagellin N-terminal helical region J4N38_11430 PF00700 Bacterial flagellin C-terminal helical region J4N38_11435 PF00700 Bacterial flagellin C-terminal helical region J4N38_11435 PF07196 Flagellin hook IN motif J4N38_11435 PF00669 Bacterial flagellin N-terminal helical region J4N38_11440 PF00700 Bacterial flagellin C-terminal helical region J4N38_11440 PF00669 Bacterial flagellin N-terminal helical region J4N38_11445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11445 PF07196 Flagellin hook IN motif J4N38_11450 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N38_11450 PF10135 Rod binding protein J4N38_11455 PF02119 Flagellar P-ring protein J4N38_11460 PF02107 Flagellar L-ring protein J4N38_11465 PF00460 Flagella basal body rod protein J4N38_11465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11470 PF00460 Flagella basal body rod protein J4N38_11470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11475 PF00460 Flagella basal body rod protein J4N38_11475 PF07559 Flagellar basal body protein FlaE J4N38_11480 PF03963 Flagellar hook capping protein - N-terminal region J4N38_11480 PF13860 FlgD Ig-like domain J4N38_11480 PF13861 FlgD Tudor-like domain J4N38_11485 PF00460 Flagella basal body rod protein J4N38_11485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_11490 PF00460 Flagella basal body rod protein J4N38_11495 PF01739 CheR methyltransferase, SAM binding domain J4N38_11495 PF03705 CheR methyltransferase, all-alpha domain J4N38_11500 PF01584 CheW-like domain J4N38_11500 PF00072 Response regulator receiver domain J4N38_11510 PF04316 Anti-sigma-28 factor, FlgM J4N38_11540 PF08241 Methyltransferase domain J4N38_11550 PF00691 OmpA family J4N38_11550 PF01389 OmpA-like transmembrane domain J4N38_11555 PF00691 OmpA family J4N38_11555 PF01389 OmpA-like transmembrane domain J4N38_11560 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_11565 PF00403 Heavy-metal-associated domain J4N38_11575 PF01728 FtsJ-like methyltransferase J4N38_11575 PF18125 RlmM ferredoxin-like domain J4N38_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_11590 PF03466 LysR substrate binding domain J4N38_11595 PF02568 Thiamine biosynthesis protein (ThiI) J4N38_11595 PF02926 THUMP domain J4N38_11600 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N38_11600 PF00691 OmpA family J4N38_11605 PF01618 MotA/TolQ/ExbB proton channel family J4N38_11610 PF02609 Exonuclease VII small subunit J4N38_11615 PF00348 Polyprenyl synthetase J4N38_11620 PF02780 Transketolase, C-terminal domain J4N38_11620 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4N38_11620 PF02779 Transketolase, pyrimidine binding domain J4N38_11625 PF00849 RNA pseudouridylate synthase J4N38_11630 PF04287 tRNA pseudouridine synthase C J4N38_11645 PF13302 Acetyltransferase (GNAT) domain J4N38_11655 PF02629 CoA binding domain J4N38_11655 PF00549 CoA-ligase J4N38_11660 PF08442 ATP-grasp domain J4N38_11660 PF00549 CoA-ligase J4N38_11665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_11665 PF00364 Biotin-requiring enzyme J4N38_11665 PF02817 e3 binding domain J4N38_11670 PF16078 2-oxoglutarate dehydrogenase N-terminus J4N38_11670 PF00676 Dehydrogenase E1 component J4N38_11670 PF16870 2-oxoglutarate dehydrogenase C-terminal J4N38_11670 PF02779 Transketolase, pyrimidine binding domain J4N38_11675 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N38_11680 PF00890 FAD binding domain J4N38_11680 PF02910 Fumarate reductase flavoprotein C-term J4N38_11685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N38_11690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N38_11695 PF00285 Citrate synthase, C-terminal domain J4N38_11700 PF01784 NIF3 (NGG1p interacting factor 3) J4N38_11710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_11710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_11710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_11710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_11715 PF03925 SeqA protein C-terminal domain J4N38_11715 PF17206 SeqA protein N-terminal domain J4N38_11720 PF12697 Alpha/beta hydrolase family J4N38_11730 PF00258 Flavodoxin J4N38_11735 PF03120 NAD-dependent DNA ligase OB-fold domain J4N38_11735 PF01653 NAD-dependent DNA ligase adenylation domain J4N38_11735 PF00533 BRCA1 C Terminus (BRCT) domain J4N38_11735 PF12826 Helix-hairpin-helix motif J4N38_11735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4N38_11740 PF04354 ZipA, C-terminal FtsZ-binding domain J4N38_11750 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_11755 PF00381 PTS HPr component phosphorylation site J4N38_11760 PF05524 PEP-utilising enzyme, N-terminal J4N38_11760 PF00391 PEP-utilising enzyme, mobile domain J4N38_11760 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_11765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N38_11770 PF01494 FAD binding domain J4N38_11775 PF00919 Uncharacterized protein family UPF0004 J4N38_11775 PF04055 Radical SAM superfamily J4N38_11775 PF01938 TRAM domain J4N38_11780 PF02562 PhoH-like protein J4N38_11785 PF02130 Uncharacterized protein family UPF0054 J4N38_11790 PF00571 CBS domain J4N38_11790 PF03471 Transporter associated domain J4N38_11795 PF00795 Carbon-nitrogen hydrolase J4N38_11800 PF07295 Zinc-ribbon containing domain J4N38_11805 PF08264 Anticodon-binding domain of tRNA J4N38_11805 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_11805 PF13603 Leucyl-tRNA synthetase, Domain 2 J4N38_11810 PF04390 Lipopolysaccharide-assembly J4N38_11815 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J4N38_11815 PF06144 DNA polymerase III, delta subunit J4N38_11825 PF02590 Predicted SPOUT methyltransferase J4N38_11830 PF03717 Penicillin-binding Protein dimerisation domain J4N38_11830 PF00905 Penicillin binding protein transpeptidase domain J4N38_11835 PF01098 Cell cycle protein J4N38_11840 PF03330 Lytic transglycolase J4N38_11840 PF05036 Sporulation related domain J4N38_11845 PF07943 Penicillin-binding protein 5, C-terminal domain J4N38_11845 PF00768 D-alanyl-D-alanine carboxypeptidase J4N38_11850 PF04359 Protein of unknown function (DUF493) J4N38_11855 PF03099 Biotin/lipoate A/B protein ligase family J4N38_11860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4N38_11860 PF04055 Radical SAM superfamily J4N38_11875 PF00464 Serine hydroxymethyltransferase J4N38_11885 PF00873 AcrB/AcrD/AcrF family J4N38_11890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_11915 PF00128 Alpha amylase, catalytic domain J4N38_11915 PF16657 Maltogenic Amylase, C-terminal domain J4N38_11920 PF02378 Phosphotransferase system, EIIC J4N38_11920 PF00367 phosphotransferase system, EIIB J4N38_11925 PF00356 Bacterial regulatory proteins, lacI family J4N38_11940 PF00005 ABC transporter J4N38_11940 PF09383 NIL domain J4N38_11945 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_11950 PF03180 NLPA lipoprotein J4N38_11955 PF03806 AbgT putative transporter family J4N38_11960 PF00444 Ribosomal protein L36 J4N38_11965 PF01197 Ribosomal protein L31 J4N38_11970 PF01980 tRNA-methyltransferase O J4N38_11970 PF18389 TrmO C-terminal domain J4N38_11975 PF03129 Anticodon binding domain J4N38_11975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_11975 PF04073 Aminoacyl-tRNA editing domain J4N38_11980 PF13230 Glutamine amidotransferases class-II J4N38_11985 PF13580 SIS domain J4N38_11990 PF09317 Domain of unknown function (DUF1974) J4N38_11990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_11990 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_11990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_12000 PF00929 Exonuclease J4N38_12005 PF00075 RNase H J4N38_12010 PF08241 Methyltransferase domain J4N38_12015 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4N38_12015 PF00753 Metallo-beta-lactamase superfamily J4N38_12020 PF01464 Transglycosylase SLT domain J4N38_12020 PF01476 LysM domain J4N38_12030 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_12035 PF00543 Nitrogen regulatory protein P-II J4N38_12040 PF00034 Cytochrome c J4N38_12045 PF01171 PP-loop family J4N38_12045 PF09179 TilS substrate binding domain J4N38_12045 PF11734 TilS substrate C-terminal domain J4N38_12050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4N38_12055 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N38_12055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N38_12055 PF14579 Helix-hairpin-helix motif J4N38_12055 PF02811 PHP domain J4N38_12055 PF01336 OB-fold nucleic acid binding domain J4N38_12060 PF01351 Ribonuclease HII J4N38_12065 PF02684 Lipid-A-disaccharide synthetase J4N38_12070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4N38_12070 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_12075 PF07977 FabA-like domain J4N38_12080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4N38_12080 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_12085 PF03938 Outer membrane protein (OmpH-like) J4N38_12090 PF01103 Surface antigen J4N38_12090 PF07244 Surface antigen variable number repeat J4N38_12095 PF17820 PDZ domain J4N38_12095 PF02163 Peptidase family M50 J4N38_12100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4N38_12100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4N38_12100 PF13288 DXP reductoisomerase C-terminal domain J4N38_12110 PF01255 Putative undecaprenyl diphosphate synthase J4N38_12115 PF01765 Ribosome recycling factor J4N38_12120 PF00696 Amino acid kinase family J4N38_12125 PF00889 Elongation factor TS J4N38_12130 PF00318 Ribosomal protein S2 J4N38_12135 PF00557 Metallopeptidase family M24 J4N38_12140 PF08335 GlnD PII-uridylyltransferase J4N38_12140 PF01966 HD domain J4N38_12140 PF01909 Nucleotidyltransferase domain J4N38_12145 PF11944 Protein of unknown function (DUF3461) J4N38_12150 PF04608 Phosphatidylglycerophosphatase A J4N38_12155 PF02769 AIR synthase related protein, C-terminal domain J4N38_12155 PF00586 AIR synthase related protein, N-terminal domain J4N38_12160 PF01029 NusB family J4N38_12165 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4N38_12170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N38_12170 PF00925 GTP cyclohydrolase II J4N38_12175 PF00677 Lumazine binding domain J4N38_12180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_12180 PF01872 RibD C-terminal domain J4N38_12185 PF03477 ATP cone domain J4N38_12190 PF00171 Aldehyde dehydrogenase family J4N38_12195 PF00696 Amino acid kinase family J4N38_12195 PF01472 PUA domain J4N38_12200 PF07417 Sigma factor-binding transcriptional regulator Crl J4N38_12205 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J4N38_12210 PF00156 Phosphoribosyl transferase domain J4N38_12215 PF00860 Permease family J4N38_12220 PF07687 Peptidase dimerisation domain J4N38_12220 PF01546 Peptidase family M20/M25/M40 J4N38_12225 PF18030 RimK PreATP-grasp domain J4N38_12225 PF08443 RimK-like ATP-grasp domain J4N38_12230 PF18030 RimK PreATP-grasp domain J4N38_12230 PF08443 RimK-like ATP-grasp domain J4N38_12240 PF00209 Sodium:neurotransmitter symporter family J4N38_12245 PF00704 Glycosyl hydrolases family 18 J4N38_12245 PF06483 Chitinase C J4N38_12255 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_12255 PF03449 Transcription elongation factor, N-terminal J4N38_12260 PF09382 RQC domain J4N38_12260 PF16124 RecQ zinc-binding J4N38_12260 PF00570 HRDC domain J4N38_12260 PF00270 DEAD/DEAH box helicase J4N38_12260 PF00271 Helicase conserved C-terminal domain J4N38_12265 PF00817 impB/mucB/samB family J4N38_12265 PF11799 impB/mucB/samB family C-terminal domain J4N38_12270 PF00990 Diguanylate cyclase, GGDEF domain J4N38_12270 PF00072 Response regulator receiver domain J4N38_12280 PF02424 ApbE family J4N38_12285 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_12285 PF00970 Oxidoreductase FAD-binding domain J4N38_12285 PF00175 Oxidoreductase NAD-binding domain J4N38_12290 PF02508 Rnf-Nqr subunit, membrane protein J4N38_12295 PF02508 Rnf-Nqr subunit, membrane protein J4N38_12300 PF04205 FMN-binding domain J4N38_12305 PF03116 NQR2, RnfD, RnfE family J4N38_12310 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J4N38_12310 PF11973 NQRA C-terminal domain J4N38_12315 PF01722 BolA-like protein J4N38_12320 PF05175 Methyltransferase small domain J4N38_12330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N38_12350 PF04542 Sigma-70 region 2 J4N38_12350 PF04545 Sigma-70, region 4 J4N38_12360 PF03502 Nucleoside-specific channel-forming protein, Tsx J4N38_12365 PF02558 Ketopantoate reductase PanE/ApbA J4N38_12365 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4N38_12370 PF01965 DJ-1/PfpI family J4N38_12375 PF00266 Aminotransferase class-V J4N38_12380 PF18073 Rubredoxin metal binding domain J4N38_12390 PF18429 Domain of unknown function (DUF5609) J4N38_12400 PF01048 Phosphorylase superfamily J4N38_12405 PF01676 Metalloenzyme superfamily J4N38_12410 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4N38_12410 PF00591 Glycosyl transferase family, a/b domain J4N38_12410 PF02885 Glycosyl transferase family, helical bundle domain J4N38_12415 PF01791 DeoC/LacD family aldolase J4N38_12425 PF07662 Na+ dependent nucleoside transporter C-terminus J4N38_12425 PF01773 Na+ dependent nucleoside transporter N-terminus J4N38_12425 PF07670 Nucleoside recognition J4N38_12430 PF01026 TatD related DNase J4N38_12440 PF03883 Peroxide stress protein YaaA J4N38_12445 PF01235 Sodium:alanine symporter family J4N38_12460 PF03167 Uracil DNA glycosylase superfamily J4N38_12465 PF01261 Xylose isomerase-like TIM barrel J4N38_12470 PF01228 Glycine radical J4N38_12475 PF03466 LysR substrate binding domain J4N38_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_12480 PF01925 Sulfite exporter TauE/SafE J4N38_12485 PF02142 MGS-like domain J4N38_12485 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4N38_12485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N38_12490 PF00117 Glutamine amidotransferase class-I J4N38_12490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4N38_12495 PF05173 Dihydrodipicolinate reductase, C-terminus J4N38_12495 PF01113 Dihydrodipicolinate reductase, N-terminus J4N38_12500 PF00293 NUDIX domain J4N38_12505 PF07516 SecA Wing and Scaffold domain J4N38_12505 PF01043 SecA preprotein cross-linking domain J4N38_12505 PF07517 SecA DEAD-like domain J4N38_12505 PF02810 SEC-C motif J4N38_12510 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4N38_12515 PF12327 FtsZ family, C-terminal domain J4N38_12515 PF00091 Tubulin/FtsZ family, GTPase domain J4N38_12520 PF02491 SHS2 domain inserted in FTSA J4N38_12525 PF03799 Cell division protein FtsQ J4N38_12525 PF08478 POTRA domain, FtsQ-type J4N38_12530 PF02875 Mur ligase family, glutamate ligase domain J4N38_12530 PF01225 Mur ligase family, catalytic domain J4N38_12530 PF08245 Mur ligase middle domain J4N38_12535 PF03033 Glycosyltransferase family 28 N-terminal domain J4N38_12535 PF04101 Glycosyltransferase family 28 C-terminal domain J4N38_12540 PF01098 Cell cycle protein J4N38_12545 PF08245 Mur ligase middle domain J4N38_12545 PF02875 Mur ligase family, glutamate ligase domain J4N38_12550 PF00953 Glycosyl transferase family 4 J4N38_12550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4N38_12555 PF08245 Mur ligase middle domain J4N38_12555 PF02875 Mur ligase family, glutamate ligase domain J4N38_12555 PF01225 Mur ligase family, catalytic domain J4N38_12560 PF01225 Mur ligase family, catalytic domain J4N38_12560 PF08245 Mur ligase middle domain J4N38_12560 PF02875 Mur ligase family, glutamate ligase domain J4N38_12565 PF00905 Penicillin binding protein transpeptidase domain J4N38_12565 PF03717 Penicillin-binding Protein dimerisation domain J4N38_12570 PF04999 Cell division protein FtsL J4N38_12575 PF01795 MraW methylase family J4N38_12585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_12590 PF04348 LppC putative lipoprotein J4N38_12595 PF02021 Uncharacterised protein family UPF0102 J4N38_12600 PF13580 SIS domain J4N38_12605 PF04972 BON domain J4N38_12610 PF04386 Stringent starvation protein B J4N38_12615 PF02798 Glutathione S-transferase, N-terminal domain J4N38_12615 PF00043 Glutathione S-transferase, C-terminal domain J4N38_12620 PF02167 Cytochrome C1 family J4N38_12625 PF00032 Cytochrome b(C-terminal)/b6/petD J4N38_12625 PF00033 Cytochrome b/b6/petB J4N38_12630 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4N38_12630 PF00355 Rieske [2Fe-2S] domain J4N38_12635 PF00380 Ribosomal protein S9/S16 J4N38_12640 PF00572 Ribosomal protein L13 J4N38_12645 PF03969 AFG1-like ATPase J4N38_12650 PF06295 Protein of unknown function (DUF1043) J4N38_12655 PF00595 PDZ domain J4N38_12660 PF13180 PDZ domain J4N38_12665 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N38_12665 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N38_12670 PF01751 Toprim domain J4N38_12670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_12670 PF00204 DNA gyrase B J4N38_12670 PF00986 DNA gyrase B subunit, carboxyl terminus J4N38_12675 PF05728 Uncharacterised protein family (UPF0227) J4N38_12680 PF00149 Calcineurin-like phosphoesterase J4N38_12685 PF06853 Protein of unknown function (DUF1249) J4N38_12690 PF00293 NUDIX domain J4N38_12695 PF02321 Outer membrane efflux protein J4N38_12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_12705 PF00512 His Kinase A (phospho-acceptor) domain J4N38_12705 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4N38_12705 PF01627 Hpt domain J4N38_12705 PF00989 PAS fold J4N38_12705 PF00072 Response regulator receiver domain J4N38_12710 PF00360 Phytochrome region J4N38_12710 PF01590 GAF domain J4N38_12710 PF00990 Diguanylate cyclase, GGDEF domain J4N38_12710 PF00563 EAL domain J4N38_12715 PF04055 Radical SAM superfamily J4N38_12715 PF16199 Radical_SAM C-terminal domain J4N38_12720 PF01645 Conserved region in glutamate synthase J4N38_12720 PF01493 GXGXG motif J4N38_12720 PF00310 Glutamine amidotransferases class-II J4N38_12720 PF04898 Glutamate synthase central domain J4N38_12725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N38_12725 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_12730 PF00310 Glutamine amidotransferases class-II J4N38_12730 PF04898 Glutamate synthase central domain J4N38_12730 PF01645 Conserved region in glutamate synthase J4N38_12730 PF01493 GXGXG motif J4N38_12735 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_12735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N38_12745 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4N38_12745 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4N38_12745 PF09157 Pseudouridine synthase II TruB, C-terminal J4N38_12750 PF02033 Ribosome-binding factor A J4N38_12755 PF00009 Elongation factor Tu GTP binding domain J4N38_12755 PF11987 Translation-initiation factor 2 J4N38_12755 PF08364 Bacterial translation initiation factor IF-2 associated region J4N38_12755 PF04760 Translation initiation factor IF-2, N-terminal region J4N38_12760 PF00575 S1 RNA binding domain J4N38_12760 PF08529 NusA N-terminal domain J4N38_12760 PF13184 NusA-like KH domain J4N38_12765 PF02576 RimP N-terminal domain J4N38_12765 PF17384 RimP C-terminal SH3 domain J4N38_12840 PF03840 Preprotein translocase SecG subunit J4N38_12845 PF13508 Acetyltransferase (GNAT) domain J4N38_12850 PF02036 SCP-2 sterol transfer family J4N38_12855 PF00990 Diguanylate cyclase, GGDEF domain J4N38_12855 PF03707 Bacterial signalling protein N terminal repeat J4N38_12855 PF00563 EAL domain J4N38_12860 PF01136 Peptidase family U32 J4N38_12865 PF01136 Peptidase family U32 J4N38_12870 PF00152 tRNA synthetases class II (D, K and N) J4N38_12870 PF01336 OB-fold nucleic acid binding domain J4N38_12880 PF05525 Branched-chain amino acid transport protein J4N38_12885 PF05175 Methyltransferase small domain J4N38_12890 PF00271 Helicase conserved C-terminal domain J4N38_12890 PF00270 DEAD/DEAH box helicase J4N38_12895 PF16658 Class II release factor RF3, C-terminal domain J4N38_12895 PF03144 Elongation factor Tu domain 2 J4N38_12895 PF00009 Elongation factor Tu GTP binding domain J4N38_12900 PF00563 EAL domain J4N38_12900 PF00990 Diguanylate cyclase, GGDEF domain J4N38_12900 PF03707 Bacterial signalling protein N terminal repeat J4N38_12905 PF00583 Acetyltransferase (GNAT) family J4N38_12915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_12915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_12915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_12915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_12920 PF00809 Pterin binding enzyme J4N38_12925 PF17862 AAA+ lid domain J4N38_12925 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_12925 PF01434 Peptidase family M41 J4N38_12925 PF06480 FtsH Extracellular J4N38_12930 PF01728 FtsJ-like methyltransferase J4N38_12935 PF01985 CRS1 / YhbY (CRM) domain J4N38_12940 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_12940 PF03449 Transcription elongation factor, N-terminal J4N38_12945 PF13609 Gram-negative porin J4N38_12950 PF00873 AcrB/AcrD/AcrF family J4N38_12960 PF01521 Iron-sulphur cluster biosynthesis J4N38_12965 PF00202 Aminotransferase class-III J4N38_12970 PF01594 AI-2E family transporter J4N38_12975 PF08468 Methyltransferase small domain N-terminal J4N38_12975 PF05175 Methyltransferase small domain J4N38_12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_12980 PF00512 His Kinase A (phospho-acceptor) domain J4N38_12980 PF00072 Response regulator receiver domain J4N38_12980 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_12985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_12990 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_12995 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_12995 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_13000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_13000 PF00005 ABC transporter J4N38_13005 PF00005 ABC transporter J4N38_13005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_13015 PF01869 BadF/BadG/BcrA/BcrD ATPase family J4N38_13020 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N38_13020 PF02838 Glycosyl hydrolase family 20, domain 2 J4N38_13025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J4N38_13025 PF06165 Glycosyltransferase family 36 J4N38_13030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_13030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_13030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_13030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_13035 PF00005 ABC transporter J4N38_13035 PF08402 TOBE domain J4N38_13045 PF13416 Bacterial extracellular solute-binding protein J4N38_13050 PF00909 Ammonium Transporter Family J4N38_13055 PF00543 Nitrogen regulatory protein P-II J4N38_13060 PF06062 Uncharacterised protein family (UPF0231) J4N38_13065 PF00330 Aconitase family (aconitate hydratase) J4N38_13065 PF11791 Aconitate B N-terminal domain J4N38_13065 PF06434 Aconitate hydratase 2 N-terminus J4N38_13070 PF01734 Patatin-like phospholipase J4N38_13075 PF00912 Transglycosylase J4N38_13075 PF00905 Penicillin binding protein transpeptidase domain J4N38_13075 PF14814 Bifunctional transglycosylase second domain J4N38_13080 PF13737 Transposase DDE domain J4N38_13095 PF00171 Aldehyde dehydrogenase family J4N38_13105 PF01797 Transposase IS200 like J4N38_13125 PF13737 Transposase DDE domain J4N38_13135 PF13737 Transposase DDE domain J4N38_13145 PF13737 Transposase DDE domain J4N38_13150 PF00884 Sulfatase J4N38_13155 PF16925 Tetracyclin repressor-like, C-terminal domain J4N38_13155 PF00440 Bacterial regulatory proteins, tetR family J4N38_13185 PF08482 ATP-dependent helicase C-terminal J4N38_13185 PF04408 Helicase associated domain (HA2) J4N38_13185 PF00271 Helicase conserved C-terminal domain J4N38_13185 PF00270 DEAD/DEAH box helicase J4N38_13190 PF03749 Sugar fermentation stimulation protein RE domain J4N38_13190 PF17746 SfsA N-terminal OB domain J4N38_13195 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N38_13200 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_13205 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N38_13205 PF01743 Poly A polymerase head domain J4N38_13205 PF12626 Polymerase A arginine-rich C-terminus J4N38_13210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N38_13215 PF02548 Ketopantoate hydroxymethyltransferase J4N38_13220 PF02569 Pantoate-beta-alanine ligase J4N38_13225 PF01061 ABC-2 type transporter J4N38_13230 PF00005 ABC transporter J4N38_13235 PF01740 STAS domain J4N38_13235 PF00916 Sulfate permease family J4N38_13240 PF00484 Carbonic anhydrase J4N38_13245 PF00156 Phosphoribosyl transferase domain J4N38_13250 PF00440 Bacterial regulatory proteins, tetR family J4N38_13255 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_13255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_13260 PF02817 e3 binding domain J4N38_13260 PF00364 Biotin-requiring enzyme J4N38_13260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_13265 PF17831 Pyruvate dehydrogenase E1 component middle domain J4N38_13265 PF00456 Transketolase, thiamine diphosphate binding domain J4N38_13270 PF07729 FCD domain J4N38_13270 PF00392 Bacterial regulatory proteins, gntR family J4N38_13275 PF02272 DHHA1 domain J4N38_13275 PF17768 RecJ OB domain J4N38_13275 PF01368 DHH family J4N38_13280 PF13098 Thioredoxin-like domain J4N38_13280 PF10411 Disulfide bond isomerase protein N-terminus J4N38_13285 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_13285 PF00589 Phage integrase family J4N38_13290 PF00258 Flavodoxin J4N38_13295 PF01510 N-acetylmuramoyl-L-alanine amidase J4N38_13300 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4N38_13300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4N38_13305 PF00114 Pilin (bacterial filament) J4N38_13305 PF07963 Prokaryotic N-terminal methylation motif J4N38_13310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N38_13310 PF00437 Type II/IV secretion system protein J4N38_13315 PF00482 Type II secretion system (T2SS), protein F J4N38_13320 PF01478 Type IV leader peptidase family J4N38_13320 PF06750 Bacterial Peptidase A24 N-terminal domain J4N38_13325 PF01121 Dephospho-CoA kinase J4N38_13330 PF07072 Cell division protein J4N38_13335 PF03884 DNA gyrase inhibitor YacG J4N38_13340 PF01245 Ribosomal protein L19 J4N38_13345 PF01746 tRNA (Guanine-1)-methyltransferase J4N38_13350 PF01782 RimM N-terminal domain J4N38_13350 PF05239 PRC-barrel domain J4N38_13355 PF00886 Ribosomal protein S16 J4N38_13360 PF00448 SRP54-type protein, GTPase domain J4N38_13360 PF02881 SRP54-type protein, helical bundle domain J4N38_13360 PF02978 Signal peptide binding domain J4N38_13365 PF01578 Cytochrome C assembly protein J4N38_13370 PF03471 Transporter associated domain J4N38_13370 PF00571 CBS domain J4N38_13370 PF01595 Cyclin M transmembrane N-terminal domain J4N38_13375 PF00140 Sigma-70 factor, region 1.2 J4N38_13375 PF04545 Sigma-70, region 4 J4N38_13375 PF04539 Sigma-70 region 3 J4N38_13375 PF04542 Sigma-70 region 2 J4N38_13380 PF01551 Peptidase family M23 J4N38_13380 PF01476 LysM domain J4N38_13390 PF01975 Survival protein SurE J4N38_13395 PF01142 tRNA pseudouridine synthase D (TruD) J4N38_13400 PF02542 YgbB family J4N38_13405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4N38_13410 PF04977 Septum formation initiator J4N38_13415 PF02673 Bacitracin resistance protein BacA J4N38_13420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N38_13425 PF02152 Dihydroneopterin aldolase J4N38_13430 PF02660 Glycerol-3-phosphate acyltransferase J4N38_13435 PF00561 alpha/beta hydrolase fold J4N38_13440 PF01609 Transposase DDE domain J4N38_13440 PF13006 Insertion element 4 transposase N-terminal J4N38_13445 PF00814 Glycoprotease family J4N38_13450 PF01165 Ribosomal protein S21 J4N38_13455 PF09424 Yqey-like protein J4N38_13460 PF10410 DnaB-helicase binding domain of primase J4N38_13460 PF08278 DNA primase DnaG DnaB-binding J4N38_13460 PF01807 CHC2 zinc finger J4N38_13460 PF08275 DNA primase catalytic core, N-terminal domain J4N38_13465 PF04545 Sigma-70, region 4 J4N38_13465 PF04539 Sigma-70 region 3 J4N38_13465 PF04542 Sigma-70 region 2 J4N38_13465 PF00140 Sigma-70 factor, region 1.2 J4N38_13465 PF03979 Sigma-70 factor, region 1.1 J4N38_13465 PF04546 Sigma-70, non-essential region J4N38_13475 PF05099 Tellurite resistance protein TerB J4N38_13475 PF00226 DnaJ domain J4N38_13480 PF03968 OstA-like protein J4N38_13480 PF04453 LPS transport system D J4N38_13485 PF09312 SurA N-terminal domain J4N38_13490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4N38_13495 PF00398 Ribosomal RNA adenine dimethylase J4N38_13500 PF04379 ApaG domain J4N38_13505 PF00149 Calcineurin-like phosphoesterase J4N38_13510 PF00186 Dihydrofolate reductase J4N38_13515 PF12821 Threonine/Serine exporter, ThrE J4N38_13520 PF06738 Putative threonine/serine exporter J4N38_13525 PF01926 50S ribosome-binding GTPase J4N38_13525 PF01018 GTP1/OBG J4N38_13530 PF01016 Ribosomal L27 protein J4N38_13535 PF00829 Ribosomal prokaryotic L21 protein J4N38_13540 PF00348 Polyprenyl synthetase J4N38_13590 PF00072 Response regulator receiver domain J4N38_13605 PF00145 C-5 cytosine-specific DNA methylase J4N38_13640 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_13640 PF00589 Phage integrase family J4N38_13705 PF02664 S-Ribosylhomocysteinase (LuxS) J4N38_13715 PF04262 Glutamate-cysteine ligase J4N38_13720 PF00675 Insulinase (Peptidase family M16) J4N38_13720 PF05193 Peptidase M16 inactive domain J4N38_13725 PF09335 SNARE associated Golgi protein J4N38_13730 PF00107 Zinc-binding dehydrogenase J4N38_13730 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_13735 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4N38_13740 PF00682 HMGL-like J4N38_13740 PF00364 Biotin-requiring enzyme J4N38_13740 PF02436 Conserved carboxylase domain J4N38_13745 PF04277 Oxaloacetate decarboxylase, gamma chain J4N38_13790 PF02599 Global regulator protein family J4N38_13795 PF00696 Amino acid kinase family J4N38_13795 PF01842 ACT domain J4N38_13795 PF13840 ACT domain J4N38_13800 PF02272 DHHA1 domain J4N38_13800 PF01411 tRNA synthetases class II (A) J4N38_13800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_13805 PF02631 RecX family J4N38_13810 PF00154 recA bacterial DNA recombination protein J4N38_13815 PF02464 Competence-damaged protein J4N38_13820 PF05192 MutS domain III J4N38_13820 PF05188 MutS domain II J4N38_13820 PF01624 MutS domain I J4N38_13820 PF05190 MutS family domain IV J4N38_13820 PF00488 MutS domain V J4N38_13825 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N38_13830 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N38_13835 PF00883 Cytosol aminopeptidase family, catalytic domain J4N38_13835 PF02789 Cytosol aminopeptidase family, N-terminal domain J4N38_13840 PF04364 DNA polymerase III chi subunit, HolC J4N38_13845 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_13845 PF10458 Valyl tRNA synthetase tRNA binding arm J4N38_13845 PF08264 Anticodon-binding domain of tRNA J4N38_13855 PF05987 Bacterial protein of unknown function (DUF898) J4N38_13865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_13865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_13870 PF00849 RNA pseudouridylate synthase J4N38_13880 PF00271 Helicase conserved C-terminal domain J4N38_13880 PF18339 RapA N-terminal Tudor like domain 1 J4N38_13880 PF18337 RapA N-terminal Tudor like domain J4N38_13880 PF12137 RNA polymerase recycling family C-terminal J4N38_13880 PF00176 SNF2 family N-terminal domain J4N38_13885 PF13638 PIN domain J4N38_13885 PF02562 PhoH-like protein J4N38_13890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_13890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_13895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_13895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_13900 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N38_13900 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N38_13905 PF01042 Endoribonuclease L-PSP J4N38_13915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N38_13915 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N38_13920 PF02863 Arginine repressor, C-terminal domain J4N38_13920 PF01316 Arginine repressor, DNA binding domain J4N38_13925 PF16868 NMT1-like family J4N38_13935 PF00582 Universal stress protein family J4N38_13950 PF06877 Regulator of ribonuclease activity B J4N38_13960 PF00266 Aminotransferase class-V J4N38_13965 PF00696 Amino acid kinase family J4N38_13965 PF01842 ACT domain J4N38_13970 PF01523 Putative modulator of DNA gyrase J4N38_13975 PF04751 Protein of unknown function (DUF615) J4N38_13980 PF01553 Acyltransferase J4N38_13985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N38_13990 PF01722 BolA-like protein J4N38_14000 PF05494 MlaC protein J4N38_14005 PF02470 MlaD protein J4N38_14010 PF02405 Permease MlaE J4N38_14015 PF00005 ABC transporter J4N38_14020 PF01699 Sodium/calcium exchanger protein J4N38_14025 PF00571 CBS domain J4N38_14025 PF01380 SIS domain J4N38_14040 PF03968 OstA-like protein J4N38_14045 PF00005 ABC transporter J4N38_14045 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4N38_14050 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4N38_14050 PF04963 Sigma-54 factor, core binding domain J4N38_14050 PF04552 Sigma-54, DNA binding domain J4N38_14055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N38_14060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_14065 PF03668 P-loop ATPase protein family J4N38_14070 PF00381 PTS HPr component phosphorylation site J4N38_14075 PF01769 Divalent cation transporter J4N38_14075 PF00571 CBS domain J4N38_14075 PF03448 MgtE intracellular N domain J4N38_14080 PF02574 Homocysteine S-methyltransferase J4N38_14080 PF00809 Pterin binding enzyme J4N38_14080 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N38_14080 PF02607 B12 binding domain J4N38_14080 PF02310 B12 binding domain J4N38_14085 PF00999 Sodium/hydrogen exchanger family J4N38_14150 PF01507 Phosphoadenosine phosphosulfate reductase family J4N38_14155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_14155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_14160 PF00667 FAD binding domain J4N38_14160 PF00175 Oxidoreductase NAD-binding domain J4N38_14160 PF00258 Flavodoxin J4N38_14180 PF01207 Dihydrouridine synthase (Dus) J4N38_14185 PF00072 Response regulator receiver domain J4N38_14190 PF00672 HAMP domain J4N38_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_14190 PF00512 His Kinase A (phospho-acceptor) domain J4N38_14190 PF00072 Response regulator receiver domain J4N38_14190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_14190 PF01627 Hpt domain J4N38_14195 PF01475 Ferric uptake regulator family J4N38_14210 PF02080 TrkA-C domain J4N38_14210 PF03600 Citrate transporter J4N38_14215 PF00009 Elongation factor Tu GTP binding domain J4N38_14220 PF01507 Phosphoadenosine phosphosulfate reductase family J4N38_14225 PF14824 Sirohaem biosynthesis protein central J4N38_14225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_14225 PF10414 Sirohaem synthase dimerisation region J4N38_14230 PF00149 Calcineurin-like phosphoesterase J4N38_14230 PF02872 5'-nucleotidase, C-terminal domain J4N38_14240 PF13673 Acetyltransferase (GNAT) domain J4N38_14255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_14255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_14265 PF01196 Ribosomal protein L17 J4N38_14270 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4N38_14270 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4N38_14270 PF01000 RNA polymerase Rpb3/RpoA insert domain J4N38_14275 PF01479 S4 domain J4N38_14275 PF00163 Ribosomal protein S4/S9 N-terminal domain J4N38_14280 PF00411 Ribosomal protein S11 J4N38_14285 PF00416 Ribosomal protein S13/S18 J4N38_14290 PF00444 Ribosomal protein L36 J4N38_14295 PF00344 SecY translocase J4N38_14300 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4N38_14305 PF00327 Ribosomal protein L30p/L7e J4N38_14310 PF00333 Ribosomal protein S5, N-terminal domain J4N38_14310 PF03719 Ribosomal protein S5, C-terminal domain J4N38_14315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4N38_14320 PF00347 Ribosomal protein L6 J4N38_14325 PF00410 Ribosomal protein S8 J4N38_14330 PF00253 Ribosomal protein S14p/S29e J4N38_14335 PF00673 ribosomal L5P family C-terminus J4N38_14335 PF00281 Ribosomal protein L5 J4N38_14340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4N38_14340 PF00467 KOW motif J4N38_14345 PF00238 Ribosomal protein L14p/L23e J4N38_14350 PF00366 Ribosomal protein S17 J4N38_14355 PF00831 Ribosomal L29 protein J4N38_14360 PF00252 Ribosomal protein L16p/L10e J4N38_14365 PF07650 KH domain J4N38_14365 PF00189 Ribosomal protein S3, C-terminal domain J4N38_14370 PF00237 Ribosomal protein L22p/L17e J4N38_14375 PF00203 Ribosomal protein S19 J4N38_14380 PF00181 Ribosomal Proteins L2, RNA binding domain J4N38_14380 PF03947 Ribosomal Proteins L2, C-terminal domain J4N38_14385 PF00276 Ribosomal protein L23 J4N38_14390 PF00573 Ribosomal protein L4/L1 family J4N38_14395 PF00297 Ribosomal protein L3 J4N38_14400 PF00338 Ribosomal protein S10p/S20e J4N38_14405 PF00588 SpoU rRNA Methylase family J4N38_14405 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N38_14410 PF08206 Ribonuclease B OB domain J4N38_14410 PF17876 Cold shock domain J4N38_14410 PF08461 Ribonuclease R winged-helix domain J4N38_14410 PF00575 S1 RNA binding domain J4N38_14410 PF00773 RNB domain J4N38_14415 PF01979 Amidohydrolase family J4N38_14420 PF08238 Sel1 repeat J4N38_14425 PF00709 Adenylosuccinate synthetase J4N38_14430 PF01112 Asparaginase J4N38_14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_14445 PF02254 TrkA-N domain J4N38_14445 PF00999 Sodium/hydrogen exchanger family J4N38_14450 PF02525 Flavodoxin-like fold J4N38_14455 PF00005 ABC transporter J4N38_14455 PF12848 ABC transporter J4N38_14465 PF00561 alpha/beta hydrolase fold J4N38_14470 PF06794 Uncharacterised protein family (UPF0270) J4N38_14475 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_14480 PF00027 Cyclic nucleotide-binding domain J4N38_14480 PF13545 Crp-like helix-turn-helix domain J4N38_14485 PF03600 Citrate transporter J4N38_14485 PF02080 TrkA-C domain J4N38_14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_14490 PF00672 HAMP domain J4N38_14500 PF01676 Metalloenzyme superfamily J4N38_14500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4N38_14505 PF01551 Peptidase family M23 J4N38_14515 PF08360 QacR-like protein, C-terminal region J4N38_14515 PF00440 Bacterial regulatory proteins, tetR family J4N38_14520 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4N38_14525 PF00293 NUDIX domain J4N38_14525 PF09297 NADH pyrophosphatase zinc ribbon domain J4N38_14530 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J4N38_14535 PF03606 C4-dicarboxylate anaerobic carrier J4N38_14545 PF00696 Amino acid kinase family J4N38_14550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_14550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_14555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_14555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_14560 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N38_14560 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N38_14565 PF01316 Arginine repressor, DNA binding domain J4N38_14565 PF02863 Arginine repressor, C-terminal domain J4N38_14570 PF11412 Disulphide bond corrector protein DsbC J4N38_14570 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_14575 PF00196 Bacterial regulatory proteins, luxR family J4N38_14575 PF00072 Response regulator receiver domain J4N38_14580 PF01914 MarC family integral membrane protein J4N38_14590 PF00474 Sodium:solute symporter family J4N38_14610 PF00121 Triosephosphate isomerase J4N38_14615 PF01554 MatE J4N38_14620 PF03737 Aldolase/RraA J4N38_14625 PF01040 UbiA prenyltransferase family J4N38_14630 PF09285 Elongation factor P, C-terminal J4N38_14630 PF08207 Elongation factor P (EF-P) KOW-like domain J4N38_14630 PF01132 Elongation factor P (EF-P) OB domain J4N38_14635 PF04055 Radical SAM superfamily J4N38_14645 PF02308 MgtC family J4N38_14650 PF00365 Phosphofructokinase J4N38_14655 PF01545 Cation efflux family J4N38_14655 PF16916 Dimerisation domain of Zinc Transporter J4N38_14665 PF00072 Response regulator receiver domain J4N38_14665 PF00486 Transcriptional regulatory protein, C terminal J4N38_14670 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N38_14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_14670 PF00512 His Kinase A (phospho-acceptor) domain J4N38_14670 PF00672 HAMP domain J4N38_14675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N38_14675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N38_14680 PF00588 SpoU rRNA Methylase family J4N38_14685 PF00579 tRNA synthetases class I (W and Y) J4N38_14690 PF13419 Haloacid dehalogenase-like hydrolase J4N38_14695 PF00834 Ribulose-phosphate 3 epimerase family J4N38_14700 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N38_14710 PF01761 3-dehydroquinate synthase J4N38_14715 PF01202 Shikimate kinase J4N38_14720 PF03958 Bacterial type II/III secretion system short domain J4N38_14720 PF07660 Secretin and TonB N terminus short domain J4N38_14720 PF00263 Bacterial type II and III secretion system protein J4N38_14720 PF11741 AMIN domain J4N38_14735 PF05137 Fimbrial assembly protein (PilN) J4N38_14745 PF17092 Penicillin-binding protein OB-like domain J4N38_14745 PF00912 Transglycosylase J4N38_14745 PF00905 Penicillin binding protein transpeptidase domain J4N38_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_14750 PF03466 LysR substrate binding domain J4N38_14755 PF08534 Redoxin J4N38_14755 PF00462 Glutaredoxin J4N38_14760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_14760 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_14765 PF01042 Endoribonuclease L-PSP J4N38_14775 PF00206 Lyase J4N38_14775 PF14698 Argininosuccinate lyase C-terminal J4N38_14775 PF00583 Acetyltransferase (GNAT) family J4N38_14780 PF00764 Arginosuccinate synthase J4N38_14785 PF00696 Amino acid kinase family J4N38_14790 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_14790 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_14795 PF07687 Peptidase dimerisation domain J4N38_14795 PF01546 Peptidase family M20/M25/M40 J4N38_14860 PF01177 Asp/Glu/Hydantoin racemase J4N38_14870 PF00593 TonB dependent receptor J4N38_14870 PF07715 TonB-dependent Receptor Plug Domain J4N38_14875 PF05958 tRNA (Uracil-5-)-methyltransferase J4N38_14885 PF00440 Bacterial regulatory proteins, tetR family J4N38_14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_14890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_14895 PF01554 MatE J4N38_14905 PF01726 LexA DNA binding domain J4N38_14905 PF00717 Peptidase S24-like J4N38_14910 PF01219 Prokaryotic diacylglycerol kinase J4N38_14915 PF01553 Acyltransferase J4N38_14920 PF01040 UbiA prenyltransferase family J4N38_14925 PF04345 Chorismate lyase J4N38_14930 PF03748 Flagellar basal body-associated protein FliL J4N38_14935 PF01694 Rhomboid family J4N38_14935 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J4N38_14940 PF00581 Rhodanese-like domain J4N38_14945 PF04545 Sigma-70, region 4 J4N38_14945 PF04542 Sigma-70 region 2 J4N38_14945 PF00140 Sigma-70 factor, region 1.2 J4N38_14950 PF18075 FtsX extracellular domain J4N38_14955 PF00005 ABC transporter J4N38_14960 PF00448 SRP54-type protein, GTPase domain J4N38_14960 PF02881 SRP54-type protein, helical bundle domain J4N38_14975 PF01914 MarC family integral membrane protein J4N38_15020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_15020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_15025 PF01022 Bacterial regulatory protein, arsR family J4N38_15030 PF08668 HDOD domain J4N38_15030 PF00563 EAL domain J4N38_15035 PF01810 LysE type translocator J4N38_15040 PF12146 Serine aminopeptidase, S33 J4N38_15060 PF03942 DTW domain J4N38_15065 PF13419 Haloacid dehalogenase-like hydrolase J4N38_15070 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_15070 PF00589 Phage integrase family J4N38_15080 PF01678 Diaminopimelate epimerase J4N38_15085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_15085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N38_15095 PF01491 Frataxin-like domain J4N38_15100 PF01295 Adenylate cyclase, class-I J4N38_15100 PF12633 Adenylate cyclase NT domain J4N38_15105 PF03900 Porphobilinogen deaminase, C-terminal domain J4N38_15105 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4N38_15110 PF02602 Uroporphyrinogen-III synthase HemD J4N38_15115 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J4N38_15120 PF07219 HemY protein N-terminus J4N38_15145 PF00175 Oxidoreductase NAD-binding domain J4N38_15150 PF00970 Oxidoreductase FAD-binding domain J4N38_15150 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_15150 PF00175 Oxidoreductase NAD-binding domain J4N38_15155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4N38_15165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_15165 PF07498 Rho termination factor, N-terminal domain J4N38_15165 PF07497 Rho termination factor, RNA-binding domain J4N38_15170 PF00085 Thioredoxin J4N38_15175 PF00270 DEAD/DEAH box helicase J4N38_15175 PF00271 Helicase conserved C-terminal domain J4N38_15180 PF02541 Ppx/GppA phosphatase family J4N38_15185 PF02592 Putative vitamin uptake transporter J4N38_15195 PF00270 DEAD/DEAH box helicase J4N38_15195 PF00271 Helicase conserved C-terminal domain J4N38_15195 PF00570 HRDC domain J4N38_15195 PF16124 RecQ zinc-binding J4N38_15195 PF09382 RQC domain J4N38_15200 PF00892 EamA-like transporter family J4N38_15210 PF01810 LysE type translocator J4N38_15220 PF13361 UvrD-like helicase C-terminal domain J4N38_15220 PF00580 UvrD/REP helicase N-terminal domain J4N38_15230 PF05114 Protein of unknown function (DUF692) J4N38_15245 PF01432 Peptidase family M3 J4N38_15250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4N38_15255 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_15255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_15270 PF01494 FAD binding domain J4N38_15275 PF03466 LysR substrate binding domain J4N38_15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_15280 PF03306 Alpha-acetolactate decarboxylase J4N38_15285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_15285 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_15285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_15300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_15310 PF12833 Helix-turn-helix domain J4N38_15315 PF07971 Glycosyl hydrolase family 92 J4N38_15315 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N38_15325 PF07971 Glycosyl hydrolase family 92 J4N38_15325 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N38_15335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_15335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_15355 PF00083 Sugar (and other) transporter J4N38_15375 PF00196 Bacterial regulatory proteins, luxR family J4N38_15375 PF00072 Response regulator receiver domain J4N38_15390 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_15390 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_15395 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_15400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_15405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_15405 PF00005 ABC transporter J4N38_15435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N38_15440 PF00580 UvrD/REP helicase N-terminal domain J4N38_15440 PF13361 UvrD-like helicase C-terminal domain J4N38_15445 PF00440 Bacterial regulatory proteins, tetR family J4N38_15450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_15455 PF00873 AcrB/AcrD/AcrF family J4N38_15460 PF04380 Membrane fusogenic activity J4N38_15465 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4N38_15465 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4N38_15470 PF03466 LysR substrate binding domain J4N38_15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_15475 PF06969 HemN C-terminal domain J4N38_15475 PF04055 Radical SAM superfamily J4N38_15485 PF04220 Der GTPase activator (YihI) J4N38_15495 PF00034 Cytochrome c J4N38_15500 PF01926 50S ribosome-binding GTPase J4N38_15505 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N38_15505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N38_15505 PF00476 DNA polymerase family A J4N38_15505 PF01612 3'-5' exonuclease J4N38_15515 PF00490 Delta-aminolevulinic acid dehydratase J4N38_15520 PF01026 TatD related DNase J4N38_15525 PF00902 Sec-independent protein translocase protein (TatC) J4N38_15530 PF02416 mttA/Hcf106 family J4N38_15535 PF02416 mttA/Hcf106 family J4N38_15540 PF03109 ABC1 family J4N38_15545 PF02036 SCP-2 sterol transfer family J4N38_15550 PF01209 ubiE/COQ5 methyltransferase family J4N38_15555 PF02646 RmuC family J4N38_15565 PF08668 HDOD domain J4N38_15580 PF01117 Aerolysin toxin J4N38_15580 PF03440 Aerolysin/Pertussis toxin (APT) domain J4N38_15590 PF10625 Universal stress protein B (UspB) J4N38_15595 PF00210 Ferritin-like domain J4N38_15600 PF00582 Universal stress protein family J4N38_15605 PF00892 EamA-like transporter family J4N38_15615 PF04445 Putative SAM-dependent methyltransferase J4N38_15620 PF00563 EAL domain J4N38_15620 PF00990 Diguanylate cyclase, GGDEF domain J4N38_15620 PF08448 PAS fold J4N38_15625 PF01037 Lrp/AsnC ligand binding domain J4N38_15635 PF07690 Major Facilitator Superfamily J4N38_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_15640 PF03466 LysR substrate binding domain J4N38_15645 PF00557 Metallopeptidase family M24 J4N38_15645 PF00557 Metallopeptidase family M24 J4N38_15645 PF01321 Creatinase/Prolidase N-terminal domain J4N38_15645 PF01321 Creatinase/Prolidase N-terminal domain J4N38_15650 PF06968 Biotin and Thiamin Synthesis associated domain J4N38_15650 PF04055 Radical SAM superfamily J4N38_15655 PF05690 Thiazole biosynthesis protein ThiG J4N38_15665 PF00899 ThiF family J4N38_15670 PF02581 Thiamine monophosphate synthase J4N38_15675 PF13667 ThiC-associated domain J4N38_15675 PF01964 Radical SAM ThiC family J4N38_15680 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4N38_15685 PF07731 Multicopper oxidase J4N38_15685 PF07732 Multicopper oxidase J4N38_15685 PF00394 Multicopper oxidase J4N38_15725 PF12724 Flavodoxin domain J4N38_15730 PF02386 Cation transport protein J4N38_15735 PF09186 Domain of unknown function (DUF1949) J4N38_15735 PF01205 Uncharacterized protein family UPF0029 J4N38_15740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N38_15740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N38_15740 PF00378 Enoyl-CoA hydratase/isomerase J4N38_15745 PF02803 Thiolase, C-terminal domain J4N38_15745 PF00108 Thiolase, N-terminal domain J4N38_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_15750 PF03466 LysR substrate binding domain J4N38_15755 PF07690 Major Facilitator Superfamily J4N38_15760 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_15765 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_15770 PF12804 MobA-like NTP transferase domain J4N38_15770 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_15775 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4N38_15775 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4N38_15780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_15780 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N38_15785 PF00231 ATP synthase J4N38_15790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_15790 PF00306 ATP synthase alpha/beta chain, C terminal domain J4N38_15790 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N38_15795 PF00213 ATP synthase delta (OSCP) subunit J4N38_15800 PF00430 ATP synthase B/B' CF(0) J4N38_15805 PF00137 ATP synthase subunit C J4N38_15810 PF00119 ATP synthase A chain J4N38_15815 PF03899 ATP synthase I chain J4N38_15820 PF17762 HTH domain found in ParB protein J4N38_15820 PF02195 ParB-like nuclease domain J4N38_15825 PF13614 AAA domain J4N38_15830 PF02527 rRNA small subunit methyltransferase G J4N38_15835 PF01134 Glucose inhibited division protein A J4N38_15835 PF13932 GidA associated domain J4N38_15840 PF00258 Flavodoxin J4N38_15845 PF01926 50S ribosome-binding GTPase J4N38_15845 PF12631 MnmE helical domain J4N38_15845 PF10396 GTP-binding protein TrmE N-terminus J4N38_15850 PF14849 YidC periplasmic domain J4N38_15850 PF02096 60Kd inner membrane protein J4N38_15855 PF01809 Putative membrane protein insertion efficiency factor J4N38_15860 PF00825 Ribonuclease P J4N38_15865 PF00468 Ribosomal protein L34 J4N38_15870 PF00005 ABC transporter J4N38_15875 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_15880 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_15885 PF18607 ParA helix turn helix domain J4N38_15885 PF13614 AAA domain J4N38_15890 PF02195 ParB-like nuclease domain J4N38_15890 PF08775 ParB family J4N38_15895 PF05127 Helicase J4N38_15895 PF13718 GNAT acetyltransferase 2 J4N38_15905 PF00072 Response regulator receiver domain J4N38_15910 PF01627 Hpt domain J4N38_15910 PF09078 CheY binding J4N38_15910 PF02895 Signal transducing histidine kinase, homodimeric domain J4N38_15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_15910 PF01584 CheW-like domain J4N38_15915 PF01584 CheW-like domain J4N38_15920 PF01584 CheW-like domain J4N38_15925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_15925 PF02203 Tar ligand binding domain homologue J4N38_15925 PF00672 HAMP domain J4N38_15930 PF01739 CheR methyltransferase, SAM binding domain J4N38_15930 PF03705 CheR methyltransferase, all-alpha domain J4N38_15935 PF03975 CheD chemotactic sensory transduction J4N38_15940 PF01339 CheB methylesterase J4N38_15940 PF00072 Response regulator receiver domain J4N38_15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_15945 PF00672 HAMP domain J4N38_15945 PF02743 Cache domain J4N38_15955 PF00072 Response regulator receiver domain J4N38_15955 PF00990 Diguanylate cyclase, GGDEF domain J4N38_15965 PF07690 Major Facilitator Superfamily J4N38_15975 PF00893 Small Multidrug Resistance protein J4N38_15980 PF03466 LysR substrate binding domain J4N38_15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_15985 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_15990 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_16005 PF13419 Haloacid dehalogenase-like hydrolase J4N38_16010 PF03459 TOBE domain J4N38_16010 PF17912 MalK OB fold domain J4N38_16010 PF00005 ABC transporter J4N38_16015 PF00582 Universal stress protein family J4N38_16020 PF00232 Glycosyl hydrolase family 1 J4N38_16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16050 PF03466 LysR substrate binding domain J4N38_16065 PF08543 Phosphomethylpyrimidine kinase J4N38_16070 PF03070 TENA/THI-4/PQQC family J4N38_16085 PF12833 Helix-turn-helix domain J4N38_16085 PF01965 DJ-1/PfpI family J4N38_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16090 PF03466 LysR substrate binding domain J4N38_16100 PF01569 PAP2 superfamily J4N38_16120 PF03466 LysR substrate binding domain J4N38_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16130 PF03466 LysR substrate binding domain J4N38_16135 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_16135 PF00698 Acyl transferase domain J4N38_16135 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_16135 PF08990 Erythronolide synthase docking J4N38_16135 PF09277 Erythronolide synthase, docking J4N38_16135 PF16197 Ketoacyl-synthetase C-terminal extension J4N38_16135 PF08659 KR domain J4N38_16135 PF00550 Phosphopantetheine attachment site J4N38_16135 PF14765 Polyketide synthase dehydratase J4N38_16135 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_16140 PF01042 Endoribonuclease L-PSP J4N38_16145 PF00892 EamA-like transporter family J4N38_16180 PF00939 Sodium:sulfate symporter transmembrane region J4N38_16190 PF07690 Major Facilitator Superfamily J4N38_16195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4N38_16195 PF05221 S-adenosyl-L-homocysteine hydrolase J4N38_16220 PF03466 LysR substrate binding domain J4N38_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16225 PF13006 Insertion element 4 transposase N-terminal J4N38_16225 PF01609 Transposase DDE domain J4N38_16235 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_16235 PF06029 AlkA N-terminal domain J4N38_16240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4N38_16240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N38_16250 PF03600 Citrate transporter J4N38_16260 PF12833 Helix-turn-helix domain J4N38_16265 PF07715 TonB-dependent Receptor Plug Domain J4N38_16265 PF00593 TonB dependent receptor J4N38_16275 PF00672 HAMP domain J4N38_16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_16275 PF00512 His Kinase A (phospho-acceptor) domain J4N38_16275 PF01627 Hpt domain J4N38_16275 PF00072 Response regulator receiver domain J4N38_16275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_16280 PF01979 Amidohydrolase family J4N38_16290 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4N38_16290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4N38_16295 PF03450 CO dehydrogenase flavoprotein C-terminal domain J4N38_16295 PF00941 FAD binding domain in molybdopterin dehydrogenase J4N38_16300 PF07729 FCD domain J4N38_16300 PF00392 Bacterial regulatory proteins, gntR family J4N38_16310 PF01979 Amidohydrolase family J4N38_16315 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_16315 PF05922 Peptidase inhibitor I9 J4N38_16315 PF00082 Subtilase family J4N38_16320 PF00672 HAMP domain J4N38_16320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_16320 PF17200 Single Cache domain 2 J4N38_16335 PF10928 Protein of unknown function (DUF2810) J4N38_16345 PF00583 Acetyltransferase (GNAT) family J4N38_16350 PF03466 LysR substrate binding domain J4N38_16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16355 PF01609 Transposase DDE domain J4N38_16355 PF13006 Insertion element 4 transposase N-terminal J4N38_16360 PF17874 MalT-like TPR region J4N38_16360 PF00196 Bacterial regulatory proteins, luxR family J4N38_16365 PF00343 Carbohydrate phosphorylase J4N38_16370 PF02446 4-alpha-glucanotransferase J4N38_16375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_16375 PF02806 Alpha amylase, C-terminal all-beta domain J4N38_16375 PF00128 Alpha amylase, catalytic domain J4N38_16395 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_16395 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4N38_16400 PF07075 Protein of unknown function (DUF1343) J4N38_16415 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_16420 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_16485 PF00005 ABC transporter J4N38_16485 PF12848 ABC transporter J4N38_16490 PF08267 Cobalamin-independent synthase, N-terminal domain J4N38_16490 PF01717 Cobalamin-independent synthase, Catalytic domain J4N38_16510 PF01638 HxlR-like helix-turn-helix J4N38_16515 PF00583 Acetyltransferase (GNAT) family J4N38_16520 PF00202 Aminotransferase class-III J4N38_16525 PF06339 Ectoine synthase J4N38_16530 PF00696 Amino acid kinase family J4N38_16530 PF13840 ACT domain J4N38_16540 PF00881 Nitroreductase family J4N38_16545 PF01418 Helix-turn-helix domain, rpiR family J4N38_16545 PF01380 SIS domain J4N38_16550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_16555 PF09261 Alpha mannosidase middle domain J4N38_16555 PF07748 Glycosyl hydrolases family 38 C-terminal domain J4N38_16555 PF01074 Glycosyl hydrolases family 38 N-terminal domain J4N38_16560 PF00128 Alpha amylase, catalytic domain J4N38_16565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_16565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_16565 PF02378 Phosphotransferase system, EIIC J4N38_16590 PF00490 Delta-aminolevulinic acid dehydratase J4N38_16595 PF02803 Thiolase, C-terminal domain J4N38_16595 PF00108 Thiolase, N-terminal domain J4N38_16605 PF05853 beta-keto acid cleavage enzyme J4N38_16615 PF01758 Sodium Bile acid symporter family J4N38_16620 PF13006 Insertion element 4 transposase N-terminal J4N38_16620 PF01609 Transposase DDE domain J4N38_16635 PF03466 LysR substrate binding domain J4N38_16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16640 PF01039 Carboxyl transferase domain J4N38_16640 PF17848 Acetyl-coA carboxylase zinc finger domain J4N38_16650 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_16655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_16655 PF00072 Response regulator receiver domain J4N38_16655 PF01627 Hpt domain J4N38_16655 PF00512 His Kinase A (phospho-acceptor) domain J4N38_16655 PF00672 HAMP domain J4N38_16665 PF00795 Carbon-nitrogen hydrolase J4N38_16670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_16675 PF08241 Methyltransferase domain J4N38_16695 PF07859 alpha/beta hydrolase fold J4N38_16705 PF00571 CBS domain J4N38_16705 PF00005 ABC transporter J4N38_16710 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_16720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_16720 PF12793 Sugar transport-related sRNA regulator N-term J4N38_16725 PF00881 Nitroreductase family J4N38_16730 PF01914 MarC family integral membrane protein J4N38_16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16740 PF03466 LysR substrate binding domain J4N38_16765 PF00263 Bacterial type II and III secretion system protein J4N38_16765 PF13629 Pilus formation protein N terminal region J4N38_16765 PF04972 BON domain J4N38_16775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_16780 PF00437 Type II/IV secretion system protein J4N38_16830 PF02424 ApbE family J4N38_16835 PF11412 Disulphide bond corrector protein DsbC J4N38_16835 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_16840 PF00171 Aldehyde dehydrogenase family J4N38_16845 PF00672 HAMP domain J4N38_16845 PF17200 Single Cache domain 2 J4N38_16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_16850 PF12849 PBP superfamily domain J4N38_16855 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_16860 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_16865 PF00005 ABC transporter J4N38_16870 PF00563 EAL domain J4N38_16870 PF00990 Diguanylate cyclase, GGDEF domain J4N38_16870 PF03707 Bacterial signalling protein N terminal repeat J4N38_16880 PF00375 Sodium:dicarboxylate symporter family J4N38_16885 PF03193 RsgA GTPase J4N38_16890 PF12945 Flagellar protein YcgR J4N38_16890 PF07238 PilZ domain J4N38_16895 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N38_16915 PF00583 Acetyltransferase (GNAT) family J4N38_16925 PF07238 PilZ domain J4N38_16925 PF12945 Flagellar protein YcgR J4N38_16940 PF13302 Acetyltransferase (GNAT) domain J4N38_16950 PF00588 SpoU rRNA Methylase family J4N38_16950 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N38_16955 PF11953 Domain of unknown function (DUF3470) J4N38_16955 PF00037 4Fe-4S binding domain J4N38_16975 PF13443 Cro/C1-type HTH DNA-binding domain J4N38_16980 PF03466 LysR substrate binding domain J4N38_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_16985 PF00764 Arginosuccinate synthase J4N38_17000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_17020 PF00873 AcrB/AcrD/AcrF family J4N38_17030 PF07670 Nucleoside recognition J4N38_17035 PF00970 Oxidoreductase FAD-binding domain J4N38_17035 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_17035 PF00175 Oxidoreductase NAD-binding domain J4N38_17040 PF03063 Prismane/CO dehydrogenase family J4N38_17050 PF03466 LysR substrate binding domain J4N38_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_17065 PF00158 Sigma-54 interaction domain J4N38_17065 PF01590 GAF domain J4N38_17070 PF12833 Helix-turn-helix domain J4N38_17070 PF02311 AraC-like ligand binding domain J4N38_17095 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4N38_17105 PF03992 Antibiotic biosynthesis monooxygenase J4N38_17110 PF03733 Inner membrane component domain J4N38_17120 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_17125 PF00155 Aminotransferase class I and II J4N38_17130 PF03466 LysR substrate binding domain J4N38_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_17135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_17145 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_17145 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_17145 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_17145 PF03413 Peptidase propeptide and YPEB domain J4N38_17145 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_17150 PF04389 Peptidase family M28 J4N38_17150 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_17175 PF00909 Ammonium Transporter Family J4N38_17180 PF00072 Response regulator receiver domain J4N38_17190 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_17190 PF04324 BFD-like [2Fe-2S] binding domain J4N38_17195 PF01266 FAD dependent oxidoreductase J4N38_17215 PF01551 Peptidase family M23 J4N38_17215 PF08525 Opacity-associated protein A N-terminal motif J4N38_17215 PF01476 LysM domain J4N38_17220 PF03922 OmpW family J4N38_17230 PF00082 Subtilase family J4N38_17235 PF00672 HAMP domain J4N38_17235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_17235 PF12729 Four helix bundle sensory module for signal transduction J4N38_17245 PF00376 MerR family regulatory protein J4N38_17245 PF09278 MerR, DNA binding J4N38_17260 PF07690 Major Facilitator Superfamily J4N38_17265 PF00474 Sodium:solute symporter family J4N38_17285 PF03358 NADPH-dependent FMN reductase J4N38_17290 PF00892 EamA-like transporter family J4N38_17300 PF18494 Pullulanase Ins domain J4N38_17300 PF03714 Bacterial pullanase-associated domain J4N38_17300 PF11852 Domain of unknown function (DUF3372) J4N38_17300 PF17967 Pullulanase N2 domain J4N38_17300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_17315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N38_17315 PF14489 QueF-like protein J4N38_17320 PF01497 Periplasmic binding protein J4N38_17320 PF12833 Helix-turn-helix domain J4N38_17325 PF00155 Aminotransferase class I and II J4N38_17330 PF00155 Aminotransferase class I and II J4N38_17330 PF00392 Bacterial regulatory proteins, gntR family J4N38_17340 PF01037 Lrp/AsnC ligand binding domain J4N38_17350 PF00672 HAMP domain J4N38_17350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_17355 PF01625 Peptide methionine sulfoxide reductase J4N38_17355 PF01641 SelR domain J4N38_17360 PF13599 Pentapeptide repeats (9 copies) J4N38_17375 PF00563 EAL domain J4N38_17375 PF00990 Diguanylate cyclase, GGDEF domain J4N38_17375 PF03707 Bacterial signalling protein N terminal repeat J4N38_17380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N38_17390 PF00873 AcrB/AcrD/AcrF family J4N38_17395 PF00873 AcrB/AcrD/AcrF family J4N38_17405 PF13977 BetI-type transcriptional repressor, C-terminal J4N38_17405 PF00440 Bacterial regulatory proteins, tetR family J4N38_17420 PF00486 Transcriptional regulatory protein, C terminal J4N38_17420 PF00072 Response regulator receiver domain J4N38_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_17425 PF13426 PAS domain J4N38_17425 PF00512 His Kinase A (phospho-acceptor) domain J4N38_17425 PF00672 HAMP domain J4N38_17430 PF13673 Acetyltransferase (GNAT) domain J4N38_17445 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N38_17445 PF00072 Response regulator receiver domain J4N38_17445 PF01627 Hpt domain J4N38_17445 PF00512 His Kinase A (phospho-acceptor) domain J4N38_17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_17445 PF00672 HAMP domain J4N38_17460 PF10415 Fumarase C C-terminus J4N38_17460 PF00206 Lyase J4N38_17485 PF00581 Rhodanese-like domain J4N38_17485 PF17773 UPF0176 acylphosphatase like domain J4N38_17510 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_17520 PF00491 Arginase family J4N38_17525 PF00392 Bacterial regulatory proteins, gntR family J4N38_17525 PF00155 Aminotransferase class I and II J4N38_17535 PF07885 Ion channel J4N38_17555 PF01323 DSBA-like thioredoxin domain J4N38_17565 PF01638 HxlR-like helix-turn-helix J4N38_17580 PF03795 YCII-related domain J4N38_17585 PF04542 Sigma-70 region 2 J4N38_17585 PF08281 Sigma-70, region 4 J4N38_17590 PF02798 Glutathione S-transferase, N-terminal domain J4N38_17595 PF13419 Haloacid dehalogenase-like hydrolase J4N38_17600 PF00128 Alpha amylase, catalytic domain J4N38_17620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_17620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_17625 PF00141 Peroxidase J4N38_17635 PF00107 Zinc-binding dehydrogenase J4N38_17635 PF16884 N-terminal domain of oxidoreductase J4N38_17640 PF00440 Bacterial regulatory proteins, tetR family J4N38_17640 PF16925 Tetracyclin repressor-like, C-terminal domain J4N38_17645 PF00990 Diguanylate cyclase, GGDEF domain J4N38_17655 PF04266 ASCH domain J4N38_17660 PF00270 DEAD/DEAH box helicase J4N38_17660 PF00271 Helicase conserved C-terminal domain J4N38_17670 PF01979 Amidohydrolase family J4N38_17685 PF00356 Bacterial regulatory proteins, lacI family J4N38_17695 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_17700 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_17705 PF03633 Glycosyl hydrolase family 65, C-terminal domain J4N38_17705 PF03632 Glycosyl hydrolase family 65 central catalytic domain J4N38_17705 PF03636 Glycosyl hydrolase family 65, N-terminal domain J4N38_17710 PF13419 Haloacid dehalogenase-like hydrolase J4N38_17715 PF00005 ABC transporter J4N38_17715 PF08402 TOBE domain J4N38_17725 PF08244 Glycosyl hydrolases family 32 C terminal J4N38_17725 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4N38_17730 PF00128 Alpha amylase, catalytic domain J4N38_17735 PF00356 Bacterial regulatory proteins, lacI family J4N38_17750 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_17755 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_17760 PF00005 ABC transporter J4N38_17760 PF17912 MalK OB fold domain J4N38_17760 PF03459 TOBE domain J4N38_17765 PF14310 Fibronectin type III-like domain J4N38_17765 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_17765 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4N38_17775 PF00128 Alpha amylase, catalytic domain J4N38_17780 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_17780 PF12464 Maltose acetyltransferase J4N38_17805 PF04231 Endonuclease I J4N38_17820 PF00849 RNA pseudouridylate synthase J4N38_17830 PF00756 Putative esterase J4N38_17835 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_17835 PF00107 Zinc-binding dehydrogenase J4N38_17840 PF03466 LysR substrate binding domain J4N38_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_17845 PF07690 Major Facilitator Superfamily J4N38_17860 PF01810 LysE type translocator J4N38_17865 PF01037 Lrp/AsnC ligand binding domain J4N38_17870 PF02824 TGS domain J4N38_17870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_17870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_17870 PF03129 Anticodon binding domain J4N38_17875 PF00707 Translation initiation factor IF-3, C-terminal domain J4N38_17875 PF05198 Translation initiation factor IF-3, N-terminal domain J4N38_17880 PF01632 Ribosomal protein L35 J4N38_17885 PF00453 Ribosomal protein L20 J4N38_17890 PF01266 FAD dependent oxidoreductase J4N38_17910 PF00171 Aldehyde dehydrogenase family J4N38_17915 PF00158 Sigma-54 interaction domain J4N38_17915 PF02954 Bacterial regulatory protein, Fis family J4N38_17915 PF01590 GAF domain J4N38_17940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N38_17940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_17945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N38_17950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4N38_17950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4N38_17955 PF01966 HD domain J4N38_17975 PF07690 Major Facilitator Superfamily J4N38_17980 PF05231 MASE1 J4N38_17980 PF07730 Histidine kinase J4N38_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_17985 PF00072 Response regulator receiver domain J4N38_17985 PF00196 Bacterial regulatory proteins, luxR family J4N38_17990 PF07690 Major Facilitator Superfamily J4N38_18005 PF01979 Amidohydrolase family J4N38_18010 PF03476 MOSC N-terminal beta barrel domain J4N38_18010 PF03476 MOSC N-terminal beta barrel domain J4N38_18010 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_18010 PF03473 MOSC domain J4N38_18010 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_18010 PF03473 MOSC domain J4N38_18015 PF03472 Autoinducer binding domain J4N38_18015 PF00196 Bacterial regulatory proteins, luxR family J4N38_18020 PF00455 DeoR C terminal sensor domain J4N38_18020 PF08220 DeoR-like helix-turn-helix domain J4N38_18040 PF05661 Protein of unknown function (DUF808) J4N38_18050 PF00128 Alpha amylase, catalytic domain J4N38_18055 PF00672 HAMP domain J4N38_18055 PF02743 Cache domain J4N38_18055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_18075 PF12849 PBP superfamily domain J4N38_18080 PF01575 MaoC like domain J4N38_18090 PF08525 Opacity-associated protein A N-terminal motif J4N38_18090 PF01551 Peptidase family M23 J4N38_18090 PF01476 LysM domain J4N38_18100 PF07690 Major Facilitator Superfamily J4N38_18105 PF00005 ABC transporter J4N38_18110 PF01032 FecCD transport family J4N38_18120 PF02472 Biopolymer transport protein ExbD/TolR J4N38_18125 PF01618 MotA/TolQ/ExbB proton channel family J4N38_18130 PF03544 Gram-negative bacterial TonB protein C-terminal J4N38_18135 PF04055 Radical SAM superfamily J4N38_18140 PF06228 Haem utilisation ChuX/HutX J4N38_18145 PF01243 Pyridoxamine 5'-phosphate oxidase J4N38_18150 PF01923 Cobalamin adenosyltransferase J4N38_18155 PF08402 TOBE domain J4N38_18155 PF00005 ABC transporter J4N38_18160 PF01547 Bacterial extracellular solute-binding protein J4N38_18165 PF14785 Maltose transport system permease protein MalF P2 domain J4N38_18165 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_18170 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_18180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_18180 PF12793 Sugar transport-related sRNA regulator N-term J4N38_18205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_18205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_18220 PF00672 HAMP domain J4N38_18220 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18220 PF00072 Response regulator receiver domain J4N38_18220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18220 PF01627 Hpt domain J4N38_18225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_18230 PF03741 Integral membrane protein TerC family J4N38_18235 PF07969 Amidohydrolase family J4N38_18240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4N38_18245 PF00529 HlyD membrane-fusion protein of T1SS J4N38_18245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_18270 PF00072 Response regulator receiver domain J4N38_18270 PF00486 Transcriptional regulatory protein, C terminal J4N38_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18275 PF00672 HAMP domain J4N38_18275 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18285 PF00155 Aminotransferase class I and II J4N38_18285 PF00392 Bacterial regulatory proteins, gntR family J4N38_18290 PF13230 Glutamine amidotransferases class-II J4N38_18295 PF13520 Amino acid permease J4N38_18305 PF03466 LysR substrate binding domain J4N38_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_18315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N38_18320 PF02566 OsmC-like protein J4N38_18325 PF13006 Insertion element 4 transposase N-terminal J4N38_18325 PF01609 Transposase DDE domain J4N38_18330 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_18330 PF12464 Maltose acetyltransferase J4N38_18335 PF00892 EamA-like transporter family J4N38_18355 PF13519 von Willebrand factor type A domain J4N38_18355 PF07584 Aerotolerance regulator N-terminal J4N38_18360 PF07584 Aerotolerance regulator N-terminal J4N38_18360 PF00092 von Willebrand factor type A domain J4N38_18370 PF01882 Protein of unknown function DUF58 J4N38_18375 PF07726 ATPase family associated with various cellular activities (AAA) J4N38_18375 PF17863 AAA lid domain J4N38_18380 PF02743 Cache domain J4N38_18380 PF00672 HAMP domain J4N38_18380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18405 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18405 PF18719 ArlS sensor domain J4N38_18410 PF00486 Transcriptional regulatory protein, C terminal J4N38_18410 PF00072 Response regulator receiver domain J4N38_18415 PF03150 Di-haem cytochrome c peroxidase J4N38_18420 PF00072 Response regulator receiver domain J4N38_18420 PF00486 Transcriptional regulatory protein, C terminal J4N38_18425 PF00672 HAMP domain J4N38_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18425 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18430 PF06123 Inner membrane protein CreD J4N38_18435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_18440 PF03466 LysR substrate binding domain J4N38_18445 PF00155 Aminotransferase class I and II J4N38_18450 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_18450 PF00107 Zinc-binding dehydrogenase J4N38_18455 PF00194 Eukaryotic-type carbonic anhydrase J4N38_18465 PF07670 Nucleoside recognition J4N38_18465 PF01773 Na+ dependent nucleoside transporter N-terminus J4N38_18465 PF07662 Na+ dependent nucleoside transporter C-terminus J4N38_18470 PF01546 Peptidase family M20/M25/M40 J4N38_18470 PF07687 Peptidase dimerisation domain J4N38_18495 PF00072 Response regulator receiver domain J4N38_18495 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_18495 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18500 PF00072 Response regulator receiver domain J4N38_18500 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18500 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_18505 PF00672 HAMP domain J4N38_18505 PF00512 His Kinase A (phospho-acceptor) domain J4N38_18505 PF01627 Hpt domain J4N38_18505 PF00072 Response regulator receiver domain J4N38_18505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18515 PF03466 LysR substrate binding domain J4N38_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_18525 PF13193 AMP-binding enzyme C-terminal domain J4N38_18525 PF00501 AMP-binding enzyme J4N38_18530 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4N38_18535 PF01329 Pterin 4 alpha carbinolamine dehydratase J4N38_18570 PF07549 SecD/SecF GG Motif J4N38_18570 PF13721 SecD export protein N-terminal TM region J4N38_18570 PF02355 Protein export membrane protein J4N38_18575 PF02355 Protein export membrane protein J4N38_18575 PF07549 SecD/SecF GG Motif J4N38_18600 PF00465 Iron-containing alcohol dehydrogenase J4N38_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_18615 PF03466 LysR substrate binding domain J4N38_18620 PF13419 Haloacid dehalogenase-like hydrolase J4N38_18645 PF13419 Haloacid dehalogenase-like hydrolase J4N38_18650 PF00202 Aminotransferase class-III J4N38_18655 PF00266 Aminotransferase class-V J4N38_18665 PF00005 ABC transporter J4N38_18670 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_18675 PF07702 UTRA domain J4N38_18675 PF00392 Bacterial regulatory proteins, gntR family J4N38_18690 PF18027 Cytosolic carboxypeptidase N-terminal domain J4N38_18690 PF00246 Zinc carboxypeptidase J4N38_18695 PF01266 FAD dependent oxidoreductase J4N38_18700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_18700 PF03466 LysR substrate binding domain J4N38_18705 PF03315 Serine dehydratase beta chain J4N38_18705 PF03313 Serine dehydratase alpha chain J4N38_18725 PF00990 Diguanylate cyclase, GGDEF domain J4N38_18730 PF01584 CheW-like domain J4N38_18730 PF00072 Response regulator receiver domain J4N38_18745 PF08329 Chitinase A, N-terminal domain J4N38_18745 PF00704 Glycosyl hydrolases family 18 J4N38_18755 PF01212 Beta-eliminating lyase J4N38_18760 PF00293 NUDIX domain J4N38_18765 PF07728 AAA domain (dynein-related subfamily) J4N38_18765 PF12592 Protein of unknown function (DUF3763) J4N38_18765 PF17868 AAA lid domain J4N38_18770 PF05762 VWA domain containing CoxE-like protein J4N38_18785 PF01037 Lrp/AsnC ligand binding domain J4N38_18790 PF00990 Diguanylate cyclase, GGDEF domain J4N38_18790 PF08448 PAS fold J4N38_18795 PF01047 MarR family J4N38_18800 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_18815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_18820 PF00873 AcrB/AcrD/AcrF family J4N38_18825 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_18845 PF03222 Tryptophan/tyrosine permease family J4N38_18850 PF04336 Acyl carrier protein phosphodiesterase J4N38_18855 PF00270 DEAD/DEAH box helicase J4N38_18855 PF00271 Helicase conserved C-terminal domain J4N38_18860 PF12729 Four helix bundle sensory module for signal transduction J4N38_18860 PF00672 HAMP domain J4N38_18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_18865 PF13419 Haloacid dehalogenase-like hydrolase J4N38_18870 PF00294 pfkB family carbohydrate kinase J4N38_18885 PF13419 Haloacid dehalogenase-like hydrolase J4N38_18900 PF00384 Molybdopterin oxidoreductase J4N38_18900 PF01568 Molydopterin dinucleotide binding domain J4N38_18900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N38_18905 PF10414 Sirohaem synthase dimerisation region J4N38_18905 PF14824 Sirohaem biosynthesis protein central J4N38_18905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_18910 PF02885 Glycosyl transferase family, helical bundle domain J4N38_18910 PF00591 Glycosyl transferase family, a/b domain J4N38_18915 PF03861 ANTAR domain J4N38_18915 PF00072 Response regulator receiver domain J4N38_18920 PF00005 ABC transporter J4N38_18925 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_18930 PF00005 ABC transporter J4N38_18935 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_18935 PF13806 Rieske-like [2Fe-2S] domain J4N38_18935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_18935 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N38_18935 PF04324 BFD-like [2Fe-2S] binding domain J4N38_18935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_18940 PF00355 Rieske [2Fe-2S] domain J4N38_18945 PF03150 Di-haem cytochrome c peroxidase J4N38_18960 PF11756 Nitrous oxide-stimulated promoter J4N38_18965 PF07690 Major Facilitator Superfamily J4N38_18970 PF00085 Thioredoxin J4N38_18975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N38_18975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N38_18980 PF12320 Type 5 capsule protein repressor C-terminal domain J4N38_18980 PF00149 Calcineurin-like phosphoesterase J4N38_18985 PF13476 AAA domain J4N38_18990 PF00072 Response regulator receiver domain J4N38_18990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_18995 PF00155 Aminotransferase class I and II J4N38_19005 PF00654 Voltage gated chloride channel J4N38_19010 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N38_19010 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N38_19015 PF01926 50S ribosome-binding GTPase J4N38_19025 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_19030 PF00672 HAMP domain J4N38_19040 PF01037 Lrp/AsnC ligand binding domain J4N38_19040 PF13404 AsnC-type helix-turn-helix domain J4N38_19060 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_19060 PF00107 Zinc-binding dehydrogenase J4N38_19065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_19065 PF02378 Phosphotransferase system, EIIC J4N38_19070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_19075 PF02779 Transketolase, pyrimidine binding domain J4N38_19075 PF00456 Transketolase, thiamine diphosphate binding domain J4N38_19075 PF02780 Transketolase, C-terminal domain J4N38_19080 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N38_19090 PF03466 LysR substrate binding domain J4N38_19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_19105 PF00581 Rhodanese-like domain J4N38_19110 PF00899 ThiF family J4N38_19115 PF00994 Probable molybdopterin binding domain J4N38_19115 PF03454 MoeA C-terminal region (domain IV) J4N38_19115 PF03453 MoeA N-terminal region (domain I and II) J4N38_19120 PF01227 GTP cyclohydrolase I J4N38_19125 PF03880 DbpA RNA binding domain J4N38_19125 PF00271 Helicase conserved C-terminal domain J4N38_19125 PF00270 DEAD/DEAH box helicase J4N38_19130 PF01641 SelR domain J4N38_19130 PF01625 Peptide methionine sulfoxide reductase J4N38_19160 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_19165 PF01081 KDPG and KHG aldolase J4N38_19170 PF02142 MGS-like domain J4N38_19175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_19180 PF00672 HAMP domain J4N38_19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_19180 PF00512 His Kinase A (phospho-acceptor) domain J4N38_19180 PF00072 Response regulator receiver domain J4N38_19180 PF01627 Hpt domain J4N38_19190 PF00465 Iron-containing alcohol dehydrogenase J4N38_19195 PF12833 Helix-turn-helix domain J4N38_19195 PF06719 AraC-type transcriptional regulator N-terminus J4N38_19200 PF00483 Nucleotidyl transferase J4N38_19205 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_19210 PF02378 Phosphotransferase system, EIIC J4N38_19215 PF00294 pfkB family carbohydrate kinase J4N38_19220 PF00381 PTS HPr component phosphorylation site J4N38_19220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_19225 PF00356 Bacterial regulatory proteins, lacI family J4N38_19225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_19240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_19240 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4N38_19250 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_19255 PF00005 ABC transporter J4N38_19255 PF03459 TOBE domain J4N38_19265 PF00360 Phytochrome region J4N38_19265 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19265 PF00563 EAL domain J4N38_19265 PF01590 GAF domain J4N38_19270 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19270 PF07694 5TMR of 5TMR-LYT J4N38_19285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N38_19285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N38_19285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4N38_19290 PF02233 NAD(P) transhydrogenase beta subunit J4N38_19300 PF00072 Response regulator receiver domain J4N38_19300 PF00486 Transcriptional regulatory protein, C terminal J4N38_19315 PF03701 Uncharacterised protein family (UPF0181) J4N38_19335 PF02463 RecF/RecN/SMC N terminal domain J4N38_19375 PF01253 Translation initiation factor SUI1 J4N38_19390 PF07478 D-ala D-ala ligase C-terminus J4N38_19390 PF01820 D-ala D-ala ligase N-terminus J4N38_19395 PF05036 Sporulation related domain J4N38_19400 PF00583 Acetyltransferase (GNAT) family J4N38_19400 PF13380 CoA binding domain J4N38_19400 PF13607 Succinyl-CoA ligase like flavodoxin domain J4N38_19405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_19405 PF03466 LysR substrate binding domain J4N38_19410 PF00593 TonB dependent receptor J4N38_19410 PF07715 TonB-dependent Receptor Plug Domain J4N38_19415 PF00672 HAMP domain J4N38_19415 PF12729 Four helix bundle sensory module for signal transduction J4N38_19415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_19420 PF00676 Dehydrogenase E1 component J4N38_19425 PF02780 Transketolase, C-terminal domain J4N38_19425 PF02779 Transketolase, pyrimidine binding domain J4N38_19430 PF02817 e3 binding domain J4N38_19430 PF00364 Biotin-requiring enzyme J4N38_19430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_19435 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19440 PF00766 Electron transfer flavoprotein FAD-binding domain J4N38_19440 PF01012 Electron transfer flavoprotein domain J4N38_19445 PF01012 Electron transfer flavoprotein domain J4N38_19455 PF00127 Copper binding proteins, plastocyanin/azurin family J4N38_19465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_19465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_19470 PF00378 Enoyl-CoA hydratase/isomerase J4N38_19475 PF00378 Enoyl-CoA hydratase/isomerase J4N38_19480 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_19480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_19480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_19485 PF00171 Aldehyde dehydrogenase family J4N38_19490 PF02803 Thiolase, C-terminal domain J4N38_19490 PF00108 Thiolase, N-terminal domain J4N38_19495 PF00376 MerR family regulatory protein J4N38_19495 PF09278 MerR, DNA binding J4N38_19500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_19500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_19500 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_19505 PF01039 Carboxyl transferase domain J4N38_19510 PF00378 Enoyl-CoA hydratase/isomerase J4N38_19515 PF00682 HMGL-like J4N38_19535 PF01810 LysE type translocator J4N38_19540 PF07681 DoxX J4N38_19545 PF02678 Pirin J4N38_19545 PF17954 Quercetinase C-terminal cupin domain J4N38_19555 PF01235 Sodium:alanine symporter family J4N38_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_19560 PF03466 LysR substrate binding domain J4N38_19565 PF13460 NAD(P)H-binding J4N38_19575 PF18416 N-acetylglucosamine binding protein domain 2 J4N38_19575 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4N38_19595 PF00529 HlyD membrane-fusion protein of T1SS J4N38_19600 PF00005 ABC transporter J4N38_19600 PF00664 ABC transporter transmembrane region J4N38_19605 PF00005 ABC transporter J4N38_19630 PF00871 Acetokinase family J4N38_19635 PF03707 Bacterial signalling protein N terminal repeat J4N38_19635 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19635 PF00563 EAL domain J4N38_19640 PF13411 MerR HTH family regulatory protein J4N38_19650 PF14579 Helix-hairpin-helix motif J4N38_19650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N38_19650 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N38_19650 PF02811 PHP domain J4N38_19650 PF00929 Exonuclease J4N38_19660 PF12793 Sugar transport-related sRNA regulator N-term J4N38_19660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_19670 PF03061 Thioesterase superfamily J4N38_19675 PF01435 Peptidase family M48 J4N38_19705 PF03741 Integral membrane protein TerC family J4N38_19710 PF02872 5'-nucleotidase, C-terminal domain J4N38_19710 PF00149 Calcineurin-like phosphoesterase J4N38_19715 PF11398 Protein of unknown function (DUF2813) J4N38_19720 PF06496 Protein of unknown function (DUF1097) J4N38_19725 PF03466 LysR substrate binding domain J4N38_19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_19730 PF01226 Formate/nitrite transporter J4N38_19735 PF04264 YceI-like domain J4N38_19740 PF01292 Prokaryotic cytochrome b561 J4N38_19760 PF03606 C4-dicarboxylate anaerobic carrier J4N38_19765 PF00072 Response regulator receiver domain J4N38_19765 PF00196 Bacterial regulatory proteins, luxR family J4N38_19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_19770 PF07730 Histidine kinase J4N38_19770 PF00672 HAMP domain J4N38_19770 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4N38_19775 PF12838 4Fe-4S dicluster domain J4N38_19775 PF13187 4Fe-4S dicluster domain J4N38_19785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N38_19785 PF00384 Molybdopterin oxidoreductase J4N38_19785 PF01568 Molydopterin dinucleotide binding domain J4N38_19790 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J4N38_19795 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N38_19805 PF16363 GDP-mannose 4,6 dehydratase J4N38_19810 PF03746 LamB/YcsF family J4N38_19820 PF02626 Carboxyltransferase domain, subdomain A and B J4N38_19835 PF00005 ABC transporter J4N38_19840 PF13472 GDSL-like Lipase/Acylhydrolase family J4N38_19845 PF07055 Enoyl reductase FAD binding domain J4N38_19845 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N38_19845 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N38_19850 PF00563 EAL domain J4N38_19850 PF00498 FHA domain J4N38_19850 PF00990 Diguanylate cyclase, GGDEF domain J4N38_19860 PF00226 DnaJ domain J4N38_19860 PF01556 DnaJ C terminal domain J4N38_19860 PF00684 DnaJ central domain J4N38_19875 PF03091 CutA1 divalent ion tolerance protein J4N38_19880 PF00580 UvrD/REP helicase N-terminal domain J4N38_19880 PF13361 UvrD-like helicase C-terminal domain J4N38_19880 PF12462 DNA helicase IV / RNA helicase N terminal J4N38_19885 PF12805 FUSC-like inner membrane protein yccS J4N38_19905 PF01266 FAD dependent oxidoreductase J4N38_19905 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N38_19915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_19915 PF00512 His Kinase A (phospho-acceptor) domain J4N38_19915 PF09308 LuxQ, periplasmic J4N38_19915 PF00072 Response regulator receiver domain J4N38_19920 PF13407 Periplasmic binding protein domain J4N38_19930 PF01541 GIY-YIG catalytic domain J4N38_19935 PF04337 Protein of unknown function, DUF480 J4N38_19945 PF04363 Protein of unknown function (DUF496) J4N38_19955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4N38_19955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4N38_19960 PF00230 Major intrinsic protein J4N38_19965 PF01266 FAD dependent oxidoreductase J4N38_19965 PF04324 BFD-like [2Fe-2S] binding domain J4N38_19970 PF00890 FAD binding domain J4N38_19975 PF02754 Cysteine-rich domain J4N38_19975 PF13183 4Fe-4S dicluster domain J4N38_19995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_19995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_20005 PF08443 RimK-like ATP-grasp domain J4N38_20005 PF18030 RimK PreATP-grasp domain J4N38_20010 PF00155 Aminotransferase class I and II J4N38_20020 PF03477 ATP cone domain J4N38_20020 PF13597 Anaerobic ribonucleoside-triphosphate reductase J4N38_20030 PF04143 Sulphur transport J4N38_20050 PF05547 Immune inhibitor A peptidase M6 J4N38_20050 PF00801 PKD domain J4N38_20055 PF00657 GDSL-like Lipase/Acylhydrolase J4N38_20060 PF07690 Major Facilitator Superfamily J4N38_20065 PF01177 Asp/Glu/Hydantoin racemase J4N38_20070 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J4N38_20070 PF00561 alpha/beta hydrolase fold J4N38_20080 PF02803 Thiolase, C-terminal domain J4N38_20080 PF00108 Thiolase, N-terminal domain J4N38_20085 PF00106 short chain dehydrogenase J4N38_20090 PF08361 MAATS-type transcriptional repressor, C-terminal region J4N38_20090 PF00440 Bacterial regulatory proteins, tetR family J4N38_20100 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N38_20130 PF01037 Lrp/AsnC ligand binding domain J4N38_20140 PF05947 Type VI secretion system, TssF J4N38_20150 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N38_20165 PF03793 PASTA domain J4N38_20165 PF00069 Protein kinase domain J4N38_20190 PF04717 Type VI secretion system, phage-baseplate injector J4N38_20195 PF05638 Type VI secretion system effector, Hcp J4N38_20200 PF07724 AAA domain (Cdc48 subfamily) J4N38_20200 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_20200 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_20200 PF17871 AAA lid domain J4N38_20205 PF00158 Sigma-54 interaction domain J4N38_20205 PF01590 GAF domain J4N38_20205 PF02954 Bacterial regulatory protein, Fis family J4N38_20210 PF00691 OmpA family J4N38_20210 PF05736 OprF membrane domain J4N38_20230 PF01551 Peptidase family M23 J4N38_20230 PF01476 LysM domain J4N38_20230 PF08525 Opacity-associated protein A N-terminal motif J4N38_20240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_20240 PF00672 HAMP domain J4N38_20240 PF17200 Single Cache domain 2 J4N38_20250 PF18081 Fanconi anemia-associated nuclease SAP domain J4N38_20250 PF08774 VRR-NUC domain J4N38_20265 PF01268 Formate--tetrahydrofolate ligase J4N38_20285 PF03707 Bacterial signalling protein N terminal repeat J4N38_20285 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20285 PF00563 EAL domain J4N38_20290 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20290 PF00072 Response regulator receiver domain J4N38_20295 PF00005 ABC transporter J4N38_20295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_20300 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_20300 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_20305 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_20310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_20320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_20320 PF00672 HAMP domain J4N38_20320 PF17200 Single Cache domain 2 J4N38_20325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_20325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_20330 PF13654 AAA domain J4N38_20330 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_20340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_20340 PF00005 ABC transporter J4N38_20345 PF03466 LysR substrate binding domain J4N38_20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_20350 PF02652 L-lactate permease J4N38_20355 PF01070 FMN-dependent dehydrogenase J4N38_20370 PF00005 ABC transporter J4N38_20370 PF00571 CBS domain J4N38_20375 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_20380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4N38_20385 PF05199 GMC oxidoreductase J4N38_20385 PF00732 GMC oxidoreductase J4N38_20390 PF00171 Aldehyde dehydrogenase family J4N38_20395 PF13977 BetI-type transcriptional repressor, C-terminal J4N38_20395 PF00440 Bacterial regulatory proteins, tetR family J4N38_20405 PF02627 Carboxymuconolactone decarboxylase family J4N38_20410 PF02525 Flavodoxin-like fold J4N38_20415 PF00155 Aminotransferase class I and II J4N38_20415 PF00392 Bacterial regulatory proteins, gntR family J4N38_20425 PF12792 CSS motif domain associated with EAL J4N38_20425 PF00563 EAL domain J4N38_20430 PF12852 Cupin J4N38_20430 PF12833 Helix-turn-helix domain J4N38_20435 PF07690 Major Facilitator Superfamily J4N38_20440 PF03466 LysR substrate binding domain J4N38_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_20445 PF04794 YdjC-like protein J4N38_20450 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_20450 PF03476 MOSC N-terminal beta barrel domain J4N38_20450 PF03473 MOSC domain J4N38_20455 PF00512 His Kinase A (phospho-acceptor) domain J4N38_20455 PF01627 Hpt domain J4N38_20455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_20455 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_20455 PF00072 Response regulator receiver domain J4N38_20455 PF00989 PAS fold J4N38_20465 PF07859 alpha/beta hydrolase fold J4N38_20465 PF00934 PE family J4N38_20470 PF03466 LysR substrate binding domain J4N38_20470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_20475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J4N38_20475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J4N38_20475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J4N38_20480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_20485 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_20490 PF00144 Beta-lactamase J4N38_20505 PF00196 Bacterial regulatory proteins, luxR family J4N38_20505 PF00072 Response regulator receiver domain J4N38_20520 PF00478 IMP dehydrogenase / GMP reductase domain J4N38_20525 PF01256 Carbohydrate kinase J4N38_20525 PF03853 YjeF-related protein N-terminus J4N38_20540 PF00072 Response regulator receiver domain J4N38_20545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_20545 PF00072 Response regulator receiver domain J4N38_20545 PF00512 His Kinase A (phospho-acceptor) domain J4N38_20545 PF00672 HAMP domain J4N38_20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_20545 PF01627 Hpt domain J4N38_20555 PF13581 Histidine kinase-like ATPase domain J4N38_20565 PF08678 Rsbr N terminal J4N38_20565 PF01740 STAS domain J4N38_20570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_20570 PF08447 PAS fold J4N38_20590 PF00575 S1 RNA binding domain J4N38_20590 PF08206 Ribonuclease B OB domain J4N38_20590 PF00773 RNB domain J4N38_20595 PF03880 DbpA RNA binding domain J4N38_20595 PF00270 DEAD/DEAH box helicase J4N38_20595 PF00271 Helicase conserved C-terminal domain J4N38_20605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_20605 PF00512 His Kinase A (phospho-acceptor) domain J4N38_20605 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_20610 PF11849 Domain of unknown function (DUF3369) J4N38_20615 PF00356 Bacterial regulatory proteins, lacI family J4N38_20620 PF00294 pfkB family carbohydrate kinase J4N38_20625 PF13407 Periplasmic binding protein domain J4N38_20630 PF02653 Branched-chain amino acid transport system / permease component J4N38_20635 PF00005 ABC transporter J4N38_20640 PF05025 RbsD / FucU transport protein family J4N38_20655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_20655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_20655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_20660 PF00909 Ammonium Transporter Family J4N38_20685 PF00155 Aminotransferase class I and II J4N38_20685 PF00392 Bacterial regulatory proteins, gntR family J4N38_20720 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_20720 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_20720 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_20720 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_20720 PF03413 Peptidase propeptide and YPEB domain J4N38_20735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_20735 PF00356 Bacterial regulatory proteins, lacI family J4N38_20740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_20740 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N38_20745 PF01202 Shikimate kinase J4N38_20750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_20750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_20760 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_20770 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20770 PF00563 EAL domain J4N38_20770 PF03707 Bacterial signalling protein N terminal repeat J4N38_20785 PF03466 LysR substrate binding domain J4N38_20785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_20790 PF00563 EAL domain J4N38_20790 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20800 PF06865 Pyrimidine/purine nucleoside phosphorylase J4N38_20810 PF00924 Mechanosensitive ion channel J4N38_20820 PF12706 Beta-lactamase superfamily domain J4N38_20830 PF02397 Bacterial sugar transferase J4N38_20840 PF02563 Polysaccharide biosynthesis/export protein J4N38_20840 PF10531 SLBB domain J4N38_20840 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4N38_20845 PF13614 AAA domain J4N38_20845 PF13807 G-rich domain on putative tyrosine kinase J4N38_20845 PF02706 Chain length determinant protein J4N38_20870 PF00578 AhpC/TSA family J4N38_20875 PF11412 Disulphide bond corrector protein DsbC J4N38_20875 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_20885 PF00583 Acetyltransferase (GNAT) family J4N38_20890 PF01810 LysE type translocator J4N38_20910 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4N38_20920 PF00012 Hsp70 protein J4N38_20925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_20925 PF03466 LysR substrate binding domain J4N38_20935 PF13378 Enolase C-terminal domain-like J4N38_20935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N38_20945 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20945 PF00563 EAL domain J4N38_20950 PF13458 Periplasmic binding protein J4N38_20955 PF00990 Diguanylate cyclase, GGDEF domain J4N38_20955 PF17151 Periplasmic sensor domain J4N38_20965 PF04389 Peptidase family M28 J4N38_20965 PF02225 PA domain J4N38_20970 PF17999 Pullulanase N1-terminal domain J4N38_20970 PF00128 Alpha amylase, catalytic domain J4N38_20970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_20985 PF01810 LysE type translocator J4N38_20990 PF00072 Response regulator receiver domain J4N38_20990 PF04397 LytTr DNA-binding domain J4N38_20995 PF06580 Histidine kinase J4N38_20995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_20995 PF07694 5TMR of 5TMR-LYT J4N38_21010 PF02687 FtsX-like permease family J4N38_21010 PF12704 MacB-like periplasmic core domain J4N38_21015 PF00005 ABC transporter J4N38_21030 PF00171 Aldehyde dehydrogenase family J4N38_21040 PF03466 LysR substrate binding domain J4N38_21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_21045 PF00990 Diguanylate cyclase, GGDEF domain J4N38_21045 PF17151 Periplasmic sensor domain J4N38_21050 PF02525 Flavodoxin-like fold J4N38_21060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_21060 PF03466 LysR substrate binding domain J4N38_21070 PF12843 Putative quorum-sensing-regulated virulence factor J4N38_21085 PF07943 Penicillin-binding protein 5, C-terminal domain J4N38_21085 PF00768 D-alanyl-D-alanine carboxypeptidase J4N38_21100 PF03889 Alternative ribosome-rescue factor A J4N38_21105 PF00313 'Cold-shock' DNA-binding domain J4N38_21120 PF00175 Oxidoreductase NAD-binding domain J4N38_21120 PF00042 Globin J4N38_21120 PF00970 Oxidoreductase FAD-binding domain J4N38_21125 PF01590 GAF domain J4N38_21125 PF00158 Sigma-54 interaction domain J4N38_21140 PF02525 Flavodoxin-like fold J4N38_21145 PF02254 TrkA-N domain J4N38_21145 PF00999 Sodium/hydrogen exchanger family J4N38_21150 PF01554 MatE J4N38_21155 PF00892 EamA-like transporter family J4N38_21160 PF00462 Glutaredoxin J4N38_21175 PF03466 LysR substrate binding domain J4N38_21175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_21180 PF00990 Diguanylate cyclase, GGDEF domain J4N38_21180 PF00563 EAL domain J4N38_21180 PF08448 PAS fold J4N38_21180 PF08447 PAS fold J4N38_21195 PF02540 NAD synthase J4N38_21200 PF00196 Bacterial regulatory proteins, luxR family J4N38_21215 PF01571 Aminomethyltransferase folate-binding domain J4N38_21215 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4N38_21225 PF00464 Serine hydroxymethyltransferase J4N38_21230 PF01597 Glycine cleavage H-protein J4N38_21235 PF02347 Glycine cleavage system P-protein J4N38_21265 PF00664 ABC transporter transmembrane region J4N38_21265 PF00005 ABC transporter J4N38_21270 PF00582 Universal stress protein family J4N38_21275 PF13244 Domain of unknown function (DUF4040) J4N38_21275 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4N38_21275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4N38_21275 PF00361 Proton-conducting membrane transporter J4N38_21280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4N38_21285 PF00361 Proton-conducting membrane transporter J4N38_21290 PF01899 Na+/H+ ion antiporter subunit J4N38_21295 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4N38_21300 PF03334 Na+/H+ antiporter subunit J4N38_21325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N38_21325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N38_21330 PF01810 LysE type translocator J4N38_21340 PF05995 Cysteine dioxygenase type I J4N38_21345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_21345 PF12729 Four helix bundle sensory module for signal transduction J4N38_21345 PF00672 HAMP domain J4N38_21350 PF00672 HAMP domain J4N38_21350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_21350 PF17200 Single Cache domain 2 J4N38_21360 PF02264 LamB porin J4N38_21365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_21365 PF00128 Alpha amylase, catalytic domain J4N38_21375 PF17945 Beta/Gamma crystallin J4N38_21375 PF12561 ToxR activated gene A lipoprotein domain J4N38_21390 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4N38_21400 PF13579 Glycosyl transferase 4-like domain J4N38_21400 PF00534 Glycosyl transferases group 1 J4N38_21410 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_21425 PF13439 Glycosyltransferase Family 4 J4N38_21425 PF00534 Glycosyl transferases group 1 J4N38_21430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_21430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_21430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_21435 PF02350 UDP-N-acetylglucosamine 2-epimerase J4N38_21440 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N38_21445 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N38_21455 PF00248 Aldo/keto reductase family J4N38_21465 PF00128 Alpha amylase, catalytic domain J4N38_21475 PF00793 DAHP synthetase I family J4N38_21480 PF00005 ABC transporter J4N38_21485 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_21490 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_21495 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_21500 PF01040 UbiA prenyltransferase family J4N38_21505 PF02628 Cytochrome oxidase assembly protein J4N38_21525 PF00510 Cytochrome c oxidase subunit III J4N38_21530 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4N38_21535 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_21540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N38_21540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4N38_21545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_21545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_21545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_21545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_21550 PF00892 EamA-like transporter family J4N38_21560 PF03618 Kinase/pyrophosphorylase J4N38_21565 PF00391 PEP-utilising enzyme, mobile domain J4N38_21565 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_21565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4N38_21570 PF07670 Nucleoside recognition J4N38_21580 PF00175 Oxidoreductase NAD-binding domain J4N38_21580 PF00970 Oxidoreductase FAD-binding domain J4N38_21605 PF00873 AcrB/AcrD/AcrF family J4N38_21620 PF02678 Pirin J4N38_21620 PF05726 Pirin C-terminal cupin domain J4N38_21625 PF00561 alpha/beta hydrolase fold J4N38_21665 PF00512 His Kinase A (phospho-acceptor) domain J4N38_21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_21665 PF00672 HAMP domain J4N38_21670 PF00072 Response regulator receiver domain J4N38_21670 PF00486 Transcriptional regulatory protein, C terminal J4N38_21675 PF00472 RF-1 domain J4N38_21695 PF01979 Amidohydrolase family J4N38_21700 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_21705 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N38_21705 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N38_21710 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_21720 PF00701 Dihydrodipicolinate synthetase family J4N38_21725 PF02423 Ornithine cyclodeaminase/mu-crystallin family J4N38_21730 PF01266 FAD dependent oxidoreductase J4N38_21735 PF05544 Proline racemase J4N38_21740 PF00171 Aldehyde dehydrogenase family J4N38_21745 PF00392 Bacterial regulatory proteins, gntR family J4N38_21745 PF07729 FCD domain J4N38_21755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_21760 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_21765 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_21765 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_21770 PF00005 ABC transporter J4N38_21770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_21775 PF00005 ABC transporter J4N38_21775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_21780 PF00557 Metallopeptidase family M24 J4N38_21780 PF05195 Aminopeptidase P, N-terminal domain J4N38_21800 PF01752 Collagenase J4N38_21800 PF08453 Peptidase family M9 N-terminal J4N38_21800 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_21810 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_21820 PF01752 Collagenase J4N38_21820 PF08453 Peptidase family M9 N-terminal J4N38_21825 PF00270 DEAD/DEAH box helicase J4N38_21825 PF00271 Helicase conserved C-terminal domain J4N38_21835 PF03734 L,D-transpeptidase catalytic domain J4N38_21835 PF01476 LysM domain J4N38_21835 PF17969 L,D-transpeptidase C-terminal domain J4N38_21840 PF00875 DNA photolyase J4N38_21840 PF03441 FAD binding domain of DNA photolyase J4N38_21845 PF13411 MerR HTH family regulatory protein J4N38_21850 PF08349 Protein of unknown function (DUF1722) J4N38_21855 PF01048 Phosphorylase superfamily J4N38_21870 PF00990 Diguanylate cyclase, GGDEF domain J4N38_21880 PF11742 Protein of unknown function (DUF3302) J4N38_21885 PF00529 HlyD membrane-fusion protein of T1SS J4N38_21885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_21890 PF03616 Sodium/glutamate symporter J4N38_21905 PF00664 ABC transporter transmembrane region J4N38_21905 PF00005 ABC transporter J4N38_21915 PF01037 Lrp/AsnC ligand binding domain J4N38_21925 PF01609 Transposase DDE domain J4N38_21925 PF13006 Insertion element 4 transposase N-terminal J4N38_21930 PF00474 Sodium:solute symporter family J4N38_21940 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4N38_21940 PF00171 Aldehyde dehydrogenase family J4N38_21940 PF01619 Proline dehydrogenase J4N38_21940 PF14850 DNA-binding domain of Proline dehydrogenase J4N38_21945 PF12833 Helix-turn-helix domain J4N38_21955 PF03781 Sulfatase-modifying factor enzyme 1 J4N38_21965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4N38_21965 PF01243 Pyridoxamine 5'-phosphate oxidase J4N38_21970 PF00529 HlyD membrane-fusion protein of T1SS J4N38_21985 PF00664 ABC transporter transmembrane region J4N38_21985 PF03412 Peptidase C39 family J4N38_21985 PF00005 ABC transporter J4N38_21990 PF08329 Chitinase A, N-terminal domain J4N38_21990 PF00704 Glycosyl hydrolases family 18 J4N38_21995 PF01212 Beta-eliminating lyase J4N38_22000 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N38_22005 PF01966 HD domain J4N38_22010 PF13302 Acetyltransferase (GNAT) domain J4N38_22020 PF02630 SCO1/SenC J4N38_22030 PF03466 LysR substrate binding domain J4N38_22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_22035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4N38_22040 PF01906 Putative heavy-metal-binding J4N38_22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_22045 PF03466 LysR substrate binding domain J4N38_22050 PF07690 Major Facilitator Superfamily J4N38_22055 PF08220 DeoR-like helix-turn-helix domain J4N38_22055 PF00455 DeoR C terminal sensor domain J4N38_22060 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_22065 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_22075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_22100 PF03306 Alpha-acetolactate decarboxylase J4N38_22105 PF07690 Major Facilitator Superfamily J4N38_22110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_22110 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_22110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_22265 PF13185 GAF domain J4N38_22265 PF00158 Sigma-54 interaction domain J4N38_22265 PF02954 Bacterial regulatory protein, Fis family J4N38_22270 PF00375 Sodium:dicarboxylate symporter family J4N38_22275 PF00672 HAMP domain J4N38_22275 PF02743 Cache domain J4N38_22275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_22285 PF04115 Ureidoglycolate lyase J4N38_22290 PF03561 Allantoicase repeat J4N38_22295 PF09349 OHCU decarboxylase J4N38_22295 PF01014 Uricase J4N38_22305 PF00576 HIUase/Transthyretin family J4N38_22310 PF00860 Permease family J4N38_22315 PF00860 Permease family J4N38_22320 PF01979 Amidohydrolase family J4N38_22325 PF06224 Winged helix DNA-binding domain J4N38_22330 PF03928 Haem-degrading J4N38_22335 PF00072 Response regulator receiver domain J4N38_22335 PF00486 Transcriptional regulatory protein, C terminal J4N38_22340 PF00512 His Kinase A (phospho-acceptor) domain J4N38_22340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_22340 PF07689 KaiB domain J4N38_22345 PF00753 Metallo-beta-lactamase superfamily J4N38_22390 PF01040 UbiA prenyltransferase family J4N38_22400 PF00510 Cytochrome c oxidase subunit III J4N38_22405 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_22410 PF06481 COX Aromatic Rich Motif J4N38_22410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N38_22415 PF10282 Lactonase, 7-bladed beta-propeller J4N38_22435 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_22440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_22440 PF00672 HAMP domain J4N38_22440 PF02743 Cache domain J4N38_22445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_22450 PF00118 TCP-1/cpn60 chaperonin family J4N38_22455 PF00166 Chaperonin 10 Kd subunit J4N38_22460 PF00011 Hsp20/alpha crystallin family J4N38_22465 PF01594 AI-2E family transporter J4N38_22500 PF00924 Mechanosensitive ion channel J4N38_22505 PF00781 Diacylglycerol kinase catalytic domain J4N38_22505 PF02142 MGS-like domain J4N38_22530 PF01590 GAF domain J4N38_22530 PF02954 Bacterial regulatory protein, Fis family J4N38_22530 PF00158 Sigma-54 interaction domain J4N38_22535 PF08448 PAS fold J4N38_22535 PF00990 Diguanylate cyclase, GGDEF domain J4N38_22535 PF00563 EAL domain J4N38_22540 PF13581 Histidine kinase-like ATPase domain J4N38_22555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_22555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_22560 PF01261 Xylose isomerase-like TIM barrel J4N38_22565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_22565 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_22565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_22570 PF01274 Malate synthase J4N38_22580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_22580 PF03466 LysR substrate binding domain J4N38_22585 PF03606 C4-dicarboxylate anaerobic carrier J4N38_22590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4N38_22590 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J4N38_22595 PF01047 MarR family J4N38_22600 PF00892 EamA-like transporter family J4N38_22620 PF03610 PTS system fructose IIA component J4N38_22620 PF03830 PTS system sorbose subfamily IIB component J4N38_22625 PF01709 Transcriptional regulator