locus-tag class description J4N37_00005 PF00308 Bacterial dnaA protein J4N37_00005 PF08299 Bacterial dnaA protein helix-turn-helix J4N37_00005 PF11638 DnaA N-terminal domain J4N37_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4N37_00010 PF02767 DNA polymerase III beta subunit, central domain J4N37_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4N37_00015 PF02463 RecF/RecN/SMC N terminal domain J4N37_00020 PF00204 DNA gyrase B J4N37_00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4N37_00020 PF18053 DNA gyrase B subunit insert domain J4N37_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_00020 PF01751 Toprim domain J4N37_00025 PF00011 Hsp20/alpha crystallin family J4N37_00030 PF00155 Aminotransferase class I and II J4N37_00035 PF00128 Alpha amylase, catalytic domain J4N37_00040 PF05746 DALR anticodon binding domain J4N37_00040 PF02092 Glycyl-tRNA synthetase beta subunit J4N37_00045 PF02091 Glycyl-tRNA synthetase alpha subunit J4N37_00050 PF01169 Uncharacterized protein family UPF0016 J4N37_00060 PF01206 Sulfurtransferase TusA J4N37_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_00070 PF03466 LysR substrate binding domain J4N37_00075 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_00075 PF00107 Zinc-binding dehydrogenase J4N37_00080 PF02803 Thiolase, C-terminal domain J4N37_00080 PF00108 Thiolase, N-terminal domain J4N37_00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N37_00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N37_00085 PF00378 Enoyl-CoA hydratase/isomerase J4N37_00090 PF09186 Domain of unknown function (DUF1949) J4N37_00090 PF01205 Uncharacterized protein family UPF0029 J4N37_00095 PF02386 Cation transport protein J4N37_00100 PF12724 Flavodoxin domain J4N37_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_00150 PF03466 LysR substrate binding domain J4N37_00155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4N37_00155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4N37_00160 PF04380 Membrane fusogenic activity J4N37_00165 PF00873 AcrB/AcrD/AcrF family J4N37_00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_00175 PF08359 YsiA-like protein, C-terminal region J4N37_00175 PF00440 Bacterial regulatory proteins, tetR family J4N37_00180 PF00580 UvrD/REP helicase N-terminal domain J4N37_00180 PF13361 UvrD-like helicase C-terminal domain J4N37_00185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N37_00215 PF13419 Haloacid dehalogenase-like hydrolase J4N37_00220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_00220 PF00005 ABC transporter J4N37_00225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_00230 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_00235 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_00235 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_00245 PF00356 Bacterial regulatory proteins, lacI family J4N37_00245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N37_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_00250 PF03466 LysR substrate binding domain J4N37_00255 PF00893 Small Multidrug Resistance protein J4N37_00260 PF00893 Small Multidrug Resistance protein J4N37_00265 PF00920 Dehydratase family J4N37_00270 PF01202 Shikimate kinase J4N37_00275 PF02447 GntP family permease J4N37_00280 PF01081 KDPG and KHG aldolase J4N37_00285 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_00285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N37_00295 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4N37_00300 PF01432 Peptidase family M3 J4N37_00305 PF01037 Lrp/AsnC ligand binding domain J4N37_00310 PF00563 EAL domain J4N37_00310 PF00990 Diguanylate cyclase, GGDEF domain J4N37_00310 PF08448 PAS fold J4N37_00315 PF04445 Putative SAM-dependent methyltransferase J4N37_00325 PF00892 EamA-like transporter family J4N37_00330 PF00582 Universal stress protein family J4N37_00335 PF00210 Ferritin-like domain J4N37_00340 PF10625 Universal stress protein B (UspB) J4N37_00350 PF00563 EAL domain J4N37_00350 PF00990 Diguanylate cyclase, GGDEF domain J4N37_00350 PF03707 Bacterial signalling protein N terminal repeat J4N37_00360 PF02646 RmuC family J4N37_00365 PF01209 ubiE/COQ5 methyltransferase family J4N37_00370 PF02036 SCP-2 sterol transfer family J4N37_00375 PF03109 ABC1 family J4N37_00380 PF02416 mttA/Hcf106 family J4N37_00385 PF02416 mttA/Hcf106 family J4N37_00390 PF00902 Sec-independent protein translocase protein (TatC) J4N37_00400 PF01026 TatD related DNase J4N37_00405 PF00490 Delta-aminolevulinic acid dehydratase J4N37_00415 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N37_00415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N37_00415 PF01612 3'-5' exonuclease J4N37_00415 PF00476 DNA polymerase family A J4N37_00420 PF01926 50S ribosome-binding GTPase J4N37_00425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N37_00435 PF04220 Der GTPase activator (YihI) J4N37_00440 PF10675 Protein of unknown function (DUF2489) J4N37_00445 PF04055 Radical SAM superfamily J4N37_00445 PF06969 HemN C-terminal domain J4N37_00450 PF00962 Adenosine/AMP deaminase J4N37_00455 PF00563 EAL domain J4N37_00455 PF00990 Diguanylate cyclase, GGDEF domain J4N37_00455 PF03707 Bacterial signalling protein N terminal repeat J4N37_00460 PF00158 Sigma-54 interaction domain J4N37_00460 PF02954 Bacterial regulatory protein, Fis family J4N37_00460 PF00072 Response regulator receiver domain J4N37_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_00465 PF00512 His Kinase A (phospho-acceptor) domain J4N37_00465 PF00989 PAS fold J4N37_00475 PF00120 Glutamine synthetase, catalytic domain J4N37_00475 PF03951 Glutamine synthetase, beta-Grasp domain J4N37_00480 PF03144 Elongation factor Tu domain 2 J4N37_00480 PF00679 Elongation factor G C-terminus J4N37_00480 PF00009 Elongation factor Tu GTP binding domain J4N37_00495 PF03631 Virulence factor BrkB J4N37_00500 PF02580 D-Tyr-tRNA(Tyr) deacylase J4N37_00505 PF09500 Putative thioesterase (yiiD_Cterm) J4N37_00505 PF00583 Acetyltransferase (GNAT) family J4N37_00515 PF01293 Phosphoenolpyruvate carboxykinase J4N37_00520 PF01430 Hsp33 protein J4N37_00525 PF01479 S4 domain J4N37_00530 PF11356 Type II secretion system protein C J4N37_00535 PF00263 Bacterial type II and III secretion system protein J4N37_00535 PF03958 Bacterial type II/III secretion system short domain J4N37_00540 PF00437 Type II/IV secretion system protein J4N37_00545 PF00482 Type II secretion system (T2SS), protein F J4N37_00550 PF08334 Type II secretion system (T2SS), protein G J4N37_00550 PF07963 Prokaryotic N-terminal methylation motif J4N37_00555 PF12019 Type II transport protein GspH J4N37_00560 PF07963 Prokaryotic N-terminal methylation motif J4N37_00560 PF02501 Type II secretion system (T2SS), protein I J4N37_00565 PF07963 Prokaryotic N-terminal methylation motif J4N37_00565 PF11612 Type II secretion system (T2SS), protein J J4N37_00570 PF03934 Type II secretion system (T2SS), protein K J4N37_00575 PF12693 GspL periplasmic domain J4N37_00575 PF05134 Type II secretion system (T2SS), protein L J4N37_00580 PF04612 Type II secretion system (T2SS), protein M J4N37_00585 PF01203 Type II secretion system (T2SS), protein N J4N37_00590 PF00459 Inositol monophosphatase family J4N37_00595 PF00293 NUDIX domain J4N37_00600 PF01521 Iron-sulphur cluster biosynthesis J4N37_00600 PF01106 NifU-like domain J4N37_00605 PF00156 Phosphoribosyl transferase domain J4N37_00610 PF00561 alpha/beta hydrolase fold J4N37_00620 PF17674 HHH domain J4N37_00620 PF09371 Tex-like protein N-terminal domain J4N37_00620 PF16921 Tex protein YqgF-like domain J4N37_00620 PF00575 S1 RNA binding domain J4N37_00630 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N37_00630 PF03449 Transcription elongation factor, N-terminal J4N37_00635 PF00672 HAMP domain J4N37_00635 PF16591 Helical bimodular sensor domain J4N37_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_00640 PF00072 Response regulator receiver domain J4N37_00640 PF00486 Transcriptional regulatory protein, C terminal J4N37_00645 PF00672 HAMP domain J4N37_00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_00645 PF00512 His Kinase A (phospho-acceptor) domain J4N37_00650 PF00860 Permease family J4N37_00655 PF00270 DEAD/DEAH box helicase J4N37_00655 PF17191 RecG wedge domain J4N37_00655 PF00271 Helicase conserved C-terminal domain J4N37_00660 PF12105 SpoU, rRNA methylase, C-terminal J4N37_00660 PF00588 SpoU rRNA Methylase family J4N37_00665 PF13291 ACT domain J4N37_00665 PF04607 Region found in RelA / SpoT proteins J4N37_00665 PF02824 TGS domain J4N37_00670 PF01192 RNA polymerase Rpb6 J4N37_00675 PF00625 Guanylate kinase J4N37_00690 PF02472 Biopolymer transport protein ExbD/TolR J4N37_00695 PF01618 MotA/TolQ/ExbB proton channel family J4N37_00710 PF07715 TonB-dependent Receptor Plug Domain J4N37_00710 PF00593 TonB dependent receptor J4N37_00715 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_00720 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_00720 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_00725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_00730 PF00005 ABC transporter J4N37_00730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_00735 PF00005 ABC transporter J4N37_00735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_00750 PF00892 EamA-like transporter family J4N37_00755 PF03755 YicC-like family, N-terminal region J4N37_00755 PF08340 Domain of unknown function (DUF1732) J4N37_00760 PF01138 3' exoribonuclease family, domain 1 J4N37_00760 PF03725 3' exoribonuclease family, domain 2 J4N37_00765 PF00156 Phosphoribosyl transferase domain J4N37_00770 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N37_00775 PF00535 Glycosyl transferase family 2 J4N37_00780 PF00440 Bacterial regulatory proteins, tetR family J4N37_00785 PF04127 DNA / pantothenate metabolism flavoprotein J4N37_00785 PF02441 Flavoprotein J4N37_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_00790 PF17200 Single Cache domain 2 J4N37_00790 PF00672 HAMP domain J4N37_00795 PF04002 RadC-like JAB domain J4N37_00800 PF00830 Ribosomal L28 family J4N37_00805 PF00471 Ribosomal protein L33 J4N37_00815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4N37_00815 PF06827 Zinc finger found in FPG and IleRS J4N37_00815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4N37_00825 PF01467 Cytidylyltransferase-like J4N37_00830 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N37_00835 PF00535 Glycosyl transferase family 2 J4N37_00840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N37_00845 PF01219 Prokaryotic diacylglycerol kinase J4N37_00855 PF11893 Domain of unknown function (DUF3413) J4N37_00855 PF00884 Sulfatase J4N37_00870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N37_00880 PF02719 Polysaccharide biosynthesis protein J4N37_00885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N37_00890 PF02348 Cytidylyltransferase J4N37_00910 PF08666 SAF domain J4N37_00910 PF03102 NeuB family J4N37_00925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4N37_00930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N37_00935 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N37_00940 PF01370 NAD dependent epimerase/dehydratase family J4N37_00945 PF00953 Glycosyl transferase family 4 J4N37_00980 PF16363 GDP-mannose 4,6 dehydratase J4N37_00985 PF04321 RmlD substrate binding domain J4N37_00990 PF00483 Nucleotidyl transferase J4N37_00995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4N37_01000 PF01061 ABC-2 type transporter J4N37_01005 PF00437 Type II/IV secretion system protein J4N37_01005 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N37_01010 PF00482 Type II secretion system (T2SS), protein F J4N37_01015 PF08334 Type II secretion system (T2SS), protein G J4N37_01015 PF07963 Prokaryotic N-terminal methylation motif J4N37_01025 PF07963 Prokaryotic N-terminal methylation motif J4N37_01025 PF02501 Type II secretion system (T2SS), protein I J4N37_01055 PF03958 Bacterial type II/III secretion system short domain J4N37_01055 PF00263 Bacterial type II and III secretion system protein J4N37_01065 PF00005 ABC transporter J4N37_01075 PF00535 Glycosyl transferase family 2 J4N37_01080 PF00753 Metallo-beta-lactamase superfamily J4N37_01080 PF10996 Beta-Casp domain J4N37_01080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4N37_01085 PF01507 Phosphoadenosine phosphosulfate reductase family J4N37_01090 PF03600 Citrate transporter J4N37_01090 PF02080 TrkA-C domain J4N37_01100 PF00009 Elongation factor Tu GTP binding domain J4N37_01130 PF00534 Glycosyl transferases group 1 J4N37_01130 PF13477 Glycosyl transferase 4-like J4N37_01135 PF02397 Bacterial sugar transferase J4N37_01140 PF17836 PglD N-terminal domain J4N37_01140 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_01145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N37_01150 PF02719 Polysaccharide biosynthesis protein J4N37_01155 PF00121 Triosephosphate isomerase J4N37_01175 PF08220 DeoR-like helix-turn-helix domain J4N37_01175 PF00455 DeoR C terminal sensor domain J4N37_01180 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4N37_01185 PF06005 Cell division protein ZapB J4N37_01190 PF03737 Aldolase/RraA J4N37_01195 PF01040 UbiA prenyltransferase family J4N37_01200 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_01200 PF07724 AAA domain (Cdc48 subfamily) J4N37_01205 PF00227 Proteasome subunit J4N37_01215 PF00356 Bacterial regulatory proteins, lacI family J4N37_01220 PF00270 DEAD/DEAH box helicase J4N37_01220 PF00271 Helicase conserved C-terminal domain J4N37_01220 PF17764 3′ DNA-binding domain (3′BD) J4N37_01220 PF18074 Primosomal protein N C-terminal domain J4N37_01220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4N37_01225 PF01197 Ribosomal protein L31 J4N37_01230 PF00338 Ribosomal protein S10p/S20e J4N37_01235 PF00297 Ribosomal protein L3 J4N37_01240 PF00573 Ribosomal protein L4/L1 family J4N37_01245 PF00276 Ribosomal protein L23 J4N37_01250 PF00181 Ribosomal Proteins L2, RNA binding domain J4N37_01250 PF03947 Ribosomal Proteins L2, C-terminal domain J4N37_01255 PF00203 Ribosomal protein S19 J4N37_01260 PF00237 Ribosomal protein L22p/L17e J4N37_01265 PF00189 Ribosomal protein S3, C-terminal domain J4N37_01265 PF07650 KH domain J4N37_01270 PF00252 Ribosomal protein L16p/L10e J4N37_01275 PF00831 Ribosomal L29 protein J4N37_01280 PF00366 Ribosomal protein S17 J4N37_01285 PF00238 Ribosomal protein L14p/L23e J4N37_01290 PF00467 KOW motif J4N37_01290 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4N37_01295 PF00281 Ribosomal protein L5 J4N37_01295 PF00673 ribosomal L5P family C-terminus J4N37_01300 PF00253 Ribosomal protein S14p/S29e J4N37_01305 PF00410 Ribosomal protein S8 J4N37_01310 PF00347 Ribosomal protein L6 J4N37_01315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4N37_01320 PF00333 Ribosomal protein S5, N-terminal domain J4N37_01320 PF03719 Ribosomal protein S5, C-terminal domain J4N37_01325 PF00327 Ribosomal protein L30p/L7e J4N37_01330 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4N37_01335 PF00344 SecY translocase J4N37_01340 PF00444 Ribosomal protein L36 J4N37_01345 PF00416 Ribosomal protein S13/S18 J4N37_01350 PF00411 Ribosomal protein S11 J4N37_01355 PF00163 Ribosomal protein S4/S9 N-terminal domain J4N37_01355 PF01479 S4 domain J4N37_01360 PF01000 RNA polymerase Rpb3/RpoA insert domain J4N37_01360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4N37_01360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4N37_01365 PF01196 Ribosomal protein L17 J4N37_01375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_01375 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N37_01390 PF13673 Acetyltransferase (GNAT) domain J4N37_01395 PF00271 Helicase conserved C-terminal domain J4N37_01395 PF00270 DEAD/DEAH box helicase J4N37_01395 PF03880 DbpA RNA binding domain J4N37_01405 PF00149 Calcineurin-like phosphoesterase J4N37_01405 PF02872 5'-nucleotidase, C-terminal domain J4N37_01410 PF14824 Sirohaem biosynthesis protein central J4N37_01410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N37_01410 PF10414 Sirohaem synthase dimerisation region J4N37_01415 PF01507 Phosphoadenosine phosphosulfate reductase family J4N37_01420 PF00009 Elongation factor Tu GTP binding domain J4N37_01425 PF02080 TrkA-C domain J4N37_01425 PF03600 Citrate transporter J4N37_01450 PF00005 ABC transporter J4N37_01460 PF10795 Protein of unknown function (DUF2607) J4N37_01465 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J4N37_01475 PF01625 Peptide methionine sulfoxide reductase J4N37_01480 PF17243 POTRA domain TamA domain 1 J4N37_01480 PF07244 Surface antigen variable number repeat J4N37_01480 PF01103 Surface antigen J4N37_01485 PF04357 TamB, inner membrane protein subunit of TAM complex J4N37_01490 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4N37_01500 PF00719 Inorganic pyrophosphatase J4N37_01505 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4N37_01510 PF01225 Mur ligase family, catalytic domain J4N37_01510 PF02875 Mur ligase family, glutamate ligase domain J4N37_01510 PF08245 Mur ligase middle domain J4N37_01515 PF02441 Flavoprotein J4N37_01525 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_01530 PF00005 ABC transporter J4N37_01545 PF16868 NMT1-like family J4N37_01550 PF01316 Arginine repressor, DNA binding domain J4N37_01550 PF02863 Arginine repressor, C-terminal domain J4N37_01555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N37_01555 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N37_01565 PF00348 Polyprenyl synthetase J4N37_01570 PF00829 Ribosomal prokaryotic L21 protein J4N37_01575 PF01016 Ribosomal L27 protein J4N37_01580 PF01018 GTP1/OBG J4N37_01580 PF01926 50S ribosome-binding GTPase J4N37_01585 PF06738 Putative threonine/serine exporter J4N37_01590 PF12821 Threonine/Serine exporter, ThrE J4N37_01595 PF00186 Dihydrofolate reductase J4N37_01600 PF00149 Calcineurin-like phosphoesterase J4N37_01605 PF04379 ApaG domain J4N37_01610 PF00398 Ribosomal RNA adenine dimethylase J4N37_01615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4N37_01620 PF09312 SurA N-terminal domain J4N37_01625 PF03968 OstA-like protein J4N37_01625 PF04453 LPS transport system D J4N37_01630 PF00226 DnaJ domain J4N37_01630 PF05099 Tellurite resistance protein TerB J4N37_01640 PF00694 Aconitase C-terminal domain J4N37_01645 PF00330 Aconitase family (aconitate hydratase) J4N37_01650 PF00180 Isocitrate/isopropylmalate dehydrogenase J4N37_01655 PF00682 HMGL-like J4N37_01655 PF08502 LeuA allosteric (dimerisation) domain J4N37_01665 PF01569 PAP2 superfamily J4N37_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_01675 PF03466 LysR substrate binding domain J4N37_01680 PF00501 AMP-binding enzyme J4N37_01685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N37_01685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N37_01685 PF00205 Thiamine pyrophosphate enzyme, central domain J4N37_01690 PF10369 Small subunit of acetolactate synthase J4N37_01695 PF00990 Diguanylate cyclase, GGDEF domain J4N37_01695 PF07694 5TMR of 5TMR-LYT J4N37_01705 PF00224 Pyruvate kinase, barrel domain J4N37_01705 PF02887 Pyruvate kinase, alpha/beta domain J4N37_01710 PF00455 DeoR C terminal sensor domain J4N37_01710 PF08220 DeoR-like helix-turn-helix domain J4N37_01715 PF01380 SIS domain J4N37_01725 PF13419 Haloacid dehalogenase-like hydrolase J4N37_01730 PF05068 Mannitol repressor J4N37_01735 PF01232 Mannitol dehydrogenase Rossmann domain J4N37_01735 PF08125 Mannitol dehydrogenase C-terminal domain J4N37_01740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N37_01740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N37_01740 PF02378 Phosphotransferase system, EIIC J4N37_01770 PF03979 Sigma-70 factor, region 1.1 J4N37_01770 PF00140 Sigma-70 factor, region 1.2 J4N37_01770 PF04539 Sigma-70 region 3 J4N37_01770 PF04542 Sigma-70 region 2 J4N37_01770 PF04545 Sigma-70, region 4 J4N37_01770 PF04546 Sigma-70, non-essential region J4N37_01775 PF08275 DNA primase catalytic core, N-terminal domain J4N37_01775 PF01807 CHC2 zinc finger J4N37_01775 PF10410 DnaB-helicase binding domain of primase J4N37_01775 PF08278 DNA primase DnaG DnaB-binding J4N37_01780 PF09424 Yqey-like protein J4N37_01785 PF01165 Ribosomal protein S21 J4N37_01790 PF00814 Glycoprotease family J4N37_01795 PF00561 alpha/beta hydrolase fold J4N37_01800 PF02660 Glycerol-3-phosphate acyltransferase J4N37_01805 PF02152 Dihydroneopterin aldolase J4N37_01810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N37_01815 PF02673 Bacitracin resistance protein BacA J4N37_01820 PF01743 Poly A polymerase head domain J4N37_01820 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N37_01820 PF01966 HD domain J4N37_01825 PF01471 Putative peptidoglycan binding domain J4N37_01825 PF13401 AAA domain J4N37_01835 PF08239 Bacterial SH3 domain J4N37_01840 PF01384 Phosphate transporter family J4N37_01845 PF01865 Protein of unknown function DUF47 J4N37_01850 PF01928 CYTH domain J4N37_01855 PF07885 Ion channel J4N37_01860 PF02743 Cache domain J4N37_01860 PF00672 HAMP domain J4N37_01860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_01865 PF08335 GlnD PII-uridylyltransferase J4N37_01865 PF03710 Glutamate-ammonia ligase adenylyltransferase J4N37_01870 PF01467 Cytidylyltransferase-like J4N37_01870 PF00294 pfkB family carbohydrate kinase J4N37_01875 PF02321 Outer membrane efflux protein J4N37_01880 PF00293 NUDIX domain J4N37_01885 PF06853 Protein of unknown function (DUF1249) J4N37_01890 PF00149 Calcineurin-like phosphoesterase J4N37_01895 PF05728 Uncharacterised protein family (UPF0227) J4N37_01900 PF00986 DNA gyrase B subunit, carboxyl terminus J4N37_01900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_01900 PF01751 Toprim domain J4N37_01900 PF00204 DNA gyrase B J4N37_01905 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N37_01905 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N37_01910 PF13180 PDZ domain J4N37_01915 PF00595 PDZ domain J4N37_01920 PF06295 Protein of unknown function (DUF1043) J4N37_01925 PF03969 AFG1-like ATPase J4N37_01930 PF00572 Ribosomal protein L13 J4N37_01935 PF00380 Ribosomal protein S9/S16 J4N37_01940 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4N37_01940 PF00355 Rieske [2Fe-2S] domain J4N37_01945 PF00033 Cytochrome b/b6/petB J4N37_01945 PF00032 Cytochrome b(C-terminal)/b6/petD J4N37_01950 PF02167 Cytochrome C1 family J4N37_01955 PF00043 Glutathione S-transferase, C-terminal domain J4N37_01955 PF02798 Glutathione S-transferase, N-terminal domain J4N37_01960 PF04386 Stringent starvation protein B J4N37_01965 PF04972 BON domain J4N37_01970 PF13580 SIS domain J4N37_01975 PF02021 Uncharacterised protein family UPF0102 J4N37_01980 PF04348 LppC putative lipoprotein J4N37_01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N37_01995 PF01795 MraW methylase family J4N37_02000 PF04999 Cell division protein FtsL J4N37_02005 PF03717 Penicillin-binding Protein dimerisation domain J4N37_02005 PF00905 Penicillin binding protein transpeptidase domain J4N37_02010 PF01225 Mur ligase family, catalytic domain J4N37_02010 PF02875 Mur ligase family, glutamate ligase domain J4N37_02010 PF08245 Mur ligase middle domain J4N37_02015 PF01225 Mur ligase family, catalytic domain J4N37_02015 PF02875 Mur ligase family, glutamate ligase domain J4N37_02015 PF08245 Mur ligase middle domain J4N37_02020 PF00953 Glycosyl transferase family 4 J4N37_02020 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4N37_02025 PF08245 Mur ligase middle domain J4N37_02025 PF02875 Mur ligase family, glutamate ligase domain J4N37_02030 PF01098 Cell cycle protein J4N37_02035 PF03033 Glycosyltransferase family 28 N-terminal domain J4N37_02035 PF04101 Glycosyltransferase family 28 C-terminal domain J4N37_02040 PF08245 Mur ligase middle domain J4N37_02040 PF02875 Mur ligase family, glutamate ligase domain J4N37_02040 PF01225 Mur ligase family, catalytic domain J4N37_02045 PF08478 POTRA domain, FtsQ-type J4N37_02045 PF03799 Cell division protein FtsQ J4N37_02050 PF02491 SHS2 domain inserted in FTSA J4N37_02055 PF12327 FtsZ family, C-terminal domain J4N37_02055 PF00091 Tubulin/FtsZ family, GTPase domain J4N37_02060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4N37_02070 PF02810 SEC-C motif J4N37_02070 PF07517 SecA DEAD-like domain J4N37_02070 PF07516 SecA Wing and Scaffold domain J4N37_02070 PF01043 SecA preprotein cross-linking domain J4N37_02075 PF00293 NUDIX domain J4N37_02080 PF01113 Dihydrodipicolinate reductase, N-terminus J4N37_02080 PF05173 Dihydrodipicolinate reductase, C-terminus J4N37_02085 PF00117 Glutamine amidotransferase class-I J4N37_02085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4N37_02090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N37_02090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4N37_02090 PF02142 MGS-like domain J4N37_02105 PF01925 Sulfite exporter TauE/SafE J4N37_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02110 PF03466 LysR substrate binding domain J4N37_02115 PF03458 UPF0126 domain J4N37_02120 PF01497 Periplasmic binding protein J4N37_02130 PF01048 Phosphorylase superfamily J4N37_02140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N37_02140 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_02145 PF00310 Glutamine amidotransferases class-II J4N37_02145 PF01645 Conserved region in glutamate synthase J4N37_02145 PF01493 GXGXG motif J4N37_02145 PF04898 Glutamate synthase central domain J4N37_02150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N37_02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_02155 PF01493 GXGXG motif J4N37_02155 PF01645 Conserved region in glutamate synthase J4N37_02155 PF00310 Glutamine amidotransferases class-II J4N37_02155 PF04898 Glutamate synthase central domain J4N37_02160 PF04055 Radical SAM superfamily J4N37_02160 PF16199 Radical_SAM C-terminal domain J4N37_02165 PF01590 GAF domain J4N37_02165 PF00990 Diguanylate cyclase, GGDEF domain J4N37_02165 PF00360 Phytochrome region J4N37_02165 PF00563 EAL domain J4N37_02170 PF00072 Response regulator receiver domain J4N37_02170 PF00989 PAS fold J4N37_02170 PF01627 Hpt domain J4N37_02170 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4N37_02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_02170 PF00512 His Kinase A (phospho-acceptor) domain J4N37_02180 PF00072 Response regulator receiver domain J4N37_02180 PF00486 Transcriptional regulatory protein, C terminal J4N37_02190 PF03737 Aldolase/RraA J4N37_02200 PF00696 Amino acid kinase family J4N37_02200 PF03447 Homoserine dehydrogenase, NAD binding domain J4N37_02200 PF01842 ACT domain J4N37_02200 PF13840 ACT domain J4N37_02200 PF00742 Homoserine dehydrogenase J4N37_02205 PF00288 GHMP kinases N terminal domain J4N37_02205 PF08544 GHMP kinases C terminal J4N37_02210 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_02210 PF14821 Threonine synthase N terminus J4N37_02220 PF01228 Glycine radical J4N37_02225 PF01261 Xylose isomerase-like TIM barrel J4N37_02230 PF03167 Uracil DNA glycosylase superfamily J4N37_02245 PF01235 Sodium:alanine symporter family J4N37_02250 PF03883 Peroxide stress protein YaaA J4N37_02260 PF00270 DEAD/DEAH box helicase J4N37_02260 PF00271 Helicase conserved C-terminal domain J4N37_02265 PF05175 Methyltransferase small domain J4N37_02270 PF05525 Branched-chain amino acid transport protein J4N37_02275 PF00258 Flavodoxin J4N37_02280 PF00589 Phage integrase family J4N37_02280 PF02899 Phage integrase, N-terminal SAM-like domain J4N37_02285 PF13098 Thioredoxin-like domain J4N37_02285 PF10411 Disulfide bond isomerase protein N-terminus J4N37_02290 PF17768 RecJ OB domain J4N37_02290 PF01368 DHH family J4N37_02290 PF02272 DHHA1 domain J4N37_02300 PF00152 tRNA synthetases class II (D, K and N) J4N37_02300 PF01336 OB-fold nucleic acid binding domain J4N37_02305 PF02954 Bacterial regulatory protein, Fis family J4N37_02305 PF00072 Response regulator receiver domain J4N37_02305 PF00158 Sigma-54 interaction domain J4N37_02315 PF00248 Aldo/keto reductase family J4N37_02325 PF02976 DNA mismatch repair enzyme MutH J4N37_02330 PF00293 NUDIX domain J4N37_02335 PF02896 PEP-utilising enzyme, TIM barrel domain J4N37_02335 PF00391 PEP-utilising enzyme, mobile domain J4N37_02335 PF05524 PEP-utilising enzyme, N-terminal J4N37_02335 PF01590 GAF domain J4N37_02340 PF01925 Sulfite exporter TauE/SafE J4N37_02345 PF01790 Prolipoprotein diacylglyceryl transferase J4N37_02350 PF00303 Thymidylate synthase J4N37_02355 PF02690 Na+/Pi-cotransporter J4N37_02360 PF03466 LysR substrate binding domain J4N37_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02365 PF01022 Bacterial regulatory protein, arsR family J4N37_02370 PF01649 Ribosomal protein S20 J4N37_02375 PF03023 Lipid II flippase MurJ J4N37_02380 PF06574 FAD synthetase J4N37_02380 PF01687 Riboflavin kinase J4N37_02385 PF00133 tRNA synthetases class I (I, L, M and V) J4N37_02385 PF08264 Anticodon-binding domain of tRNA J4N37_02385 PF06827 Zinc finger found in FPG and IleRS J4N37_02390 PF01252 Signal peptidase (SPase) II J4N37_02395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_02400 PF02401 LytB protein J4N37_02405 PF00072 Response regulator receiver domain J4N37_02405 PF04397 LytTr DNA-binding domain J4N37_02410 PF07694 5TMR of 5TMR-LYT J4N37_02410 PF06580 Histidine kinase J4N37_02415 PF02554 Carbon starvation protein CstA J4N37_02430 PF01380 SIS domain J4N37_02435 PF03702 Anhydro-N-acetylmuramic acid kinase J4N37_02440 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N37_02445 PF00793 DAHP synthetase I family J4N37_02450 PF01817 Chorismate mutase type II J4N37_02450 PF02153 Prephenate dehydrogenase J4N37_02455 PF04225 Opacity-associated protein A LysM-like domain J4N37_02455 PF01551 Peptidase family M23 J4N37_02460 PF07238 PilZ domain J4N37_02465 PF00005 ABC transporter J4N37_02465 PF12848 ABC transporter J4N37_02470 PF01464 Transglycosylase SLT domain J4N37_02470 PF14718 Soluble lytic murein transglycosylase L domain J4N37_02475 PF01371 Trp repressor protein J4N37_02480 PF01931 Protein of unknown function DUF84 J4N37_02485 PF01817 Chorismate mutase type II J4N37_02485 PF00800 Prephenate dehydratase J4N37_02490 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N37_02495 PF01464 Transglycosylase SLT domain J4N37_02500 PF13525 Outer membrane lipoprotein J4N37_02505 PF00849 RNA pseudouridylate synthase J4N37_02505 PF01479 S4 domain J4N37_02510 PF02578 Multi-copper polyphenol oxidoreductase laccase J4N37_02515 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_02515 PF17871 AAA lid domain J4N37_02515 PF07724 AAA domain (Cdc48 subfamily) J4N37_02515 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_02515 PF02861 Clp amino terminal domain, pathogenicity island component J4N37_02560 PF03411 Penicillin-insensitive murein endopeptidase J4N37_02570 PF00037 4Fe-4S binding domain J4N37_02575 PF01136 Peptidase family U32 J4N37_02575 PF16325 Peptidase family U32 C-terminal domain J4N37_02580 PF04381 Putative exonuclease, RdgC J4N37_02585 PF00072 Response regulator receiver domain J4N37_02585 PF00486 Transcriptional regulatory protein, C terminal J4N37_02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_02590 PF00512 His Kinase A (phospho-acceptor) domain J4N37_02590 PF00989 PAS fold J4N37_02590 PF11808 Phosphate regulon sensor protein PhoR J4N37_02595 PF12849 PBP superfamily domain J4N37_02600 PF02541 Ppx/GppA phosphatase family J4N37_02605 PF17941 Polyphosphate kinase C-terminal domain 1 J4N37_02605 PF13089 Polyphosphate kinase N-terminal domain J4N37_02605 PF02503 Polyphosphate kinase middle domain J4N37_02605 PF13090 Polyphosphate kinase C-terminal domain 2 J4N37_02610 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_02615 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_02620 PF00005 ABC transporter J4N37_02625 PF01895 PhoU domain J4N37_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02640 PF03466 LysR substrate binding domain J4N37_02645 PF03976 Polyphosphate kinase 2 (PPK2) J4N37_02650 PF03932 CutC family J4N37_02655 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N37_02655 PF00578 AhpC/TSA family J4N37_02660 PF03466 LysR substrate binding domain J4N37_02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02665 PF01274 Malate synthase J4N37_02670 PF00463 Isocitrate lyase family J4N37_02675 PF00571 CBS domain J4N37_02690 PF02547 Queuosine biosynthesis protein J4N37_02695 PF01702 Queuine tRNA-ribosyltransferase J4N37_02700 PF02699 Preprotein translocase subunit J4N37_02705 PF07549 SecD/SecF GG Motif J4N37_02705 PF13721 SecD export protein N-terminal TM region J4N37_02705 PF02355 Protein export membrane protein J4N37_02710 PF02355 Protein export membrane protein J4N37_02710 PF07549 SecD/SecF GG Motif J4N37_02715 PF00459 Inositol monophosphatase family J4N37_02720 PF00588 SpoU rRNA Methylase family J4N37_02725 PF02082 Transcriptional regulator J4N37_02730 PF00266 Aminotransferase class-V J4N37_02735 PF01592 NifU-like N terminal domain J4N37_02740 PF01521 Iron-sulphur cluster biosynthesis J4N37_02745 PF00226 DnaJ domain J4N37_02745 PF07743 HSCB C-terminal oligomerisation domain J4N37_02750 PF00012 Hsp70 protein J4N37_02755 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_02760 PF04384 Iron-sulphur cluster assembly J4N37_02765 PF12404 Peptidase J4N37_02765 PF00883 Cytosol aminopeptidase family, catalytic domain J4N37_02770 PF00334 Nucleoside diphosphate kinase J4N37_02775 PF04055 Radical SAM superfamily J4N37_02780 PF13464 Domain of unknown function (DUF4115) J4N37_02785 PF04551 GcpE protein J4N37_02790 PF03129 Anticodon binding domain J4N37_02790 PF13393 Histidyl-tRNA synthetase J4N37_02795 PF09976 Tetratricopeptide repeat-like domain J4N37_02800 PF13360 PQQ-like domain J4N37_02805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4N37_02805 PF01926 50S ribosome-binding GTPase J4N37_02815 PF00990 Diguanylate cyclase, GGDEF domain J4N37_02815 PF13185 GAF domain J4N37_02825 PF02601 Exonuclease VII, large subunit J4N37_02825 PF13742 OB-fold nucleic acid binding domain J4N37_02830 PF00478 IMP dehydrogenase / GMP reductase domain J4N37_02830 PF00571 CBS domain J4N37_02835 PF00958 GMP synthase C terminal domain J4N37_02835 PF02540 NAD synthase J4N37_02835 PF00117 Glutamine amidotransferase class-I J4N37_02840 PF03553 Na+/H+ antiporter family J4N37_02845 PF06483 Chitinase C J4N37_02845 PF00704 Glycosyl hydrolases family 18 J4N37_02850 PF01184 GPR1/FUN34/yaaH family J4N37_02855 PF01235 Sodium:alanine symporter family J4N37_02860 PF01266 FAD dependent oxidoreductase J4N37_02865 PF03466 LysR substrate binding domain J4N37_02865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02870 PF12729 Four helix bundle sensory module for signal transduction J4N37_02870 PF00672 HAMP domain J4N37_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_02885 PF01610 Transposase J4N37_02885 PF13542 Helix-turn-helix domain of transposase family ISL3 J4N37_02885 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J4N37_02895 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N37_02900 PF00202 Aminotransferase class-III J4N37_02920 PF12805 FUSC-like inner membrane protein yccS J4N37_02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_02925 PF03466 LysR substrate binding domain J4N37_02935 PF01668 SmpB protein J4N37_02940 PF03364 Polyketide cyclase / dehydrase and lipid transport J4N37_02945 PF03658 RnfH family Ubiquitin J4N37_02950 PF04355 SmpA / OmlA family J4N37_02960 PF02463 RecF/RecN/SMC N terminal domain J4N37_02970 PF01513 ATP-NAD kinase J4N37_02975 PF01025 GrpE J4N37_02980 PF00375 Sodium:dicarboxylate symporter family J4N37_02985 PF00012 Hsp70 protein J4N37_02990 PF00226 DnaJ domain J4N37_02990 PF01556 DnaJ C terminal domain J4N37_02990 PF00684 DnaJ central domain J4N37_02995 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor J4N37_02995 PF07963 Prokaryotic N-terminal methylation motif J4N37_03000 PF00114 Pilin (bacterial filament) J4N37_03000 PF07963 Prokaryotic N-terminal methylation motif J4N37_03020 PF03806 AbgT putative transporter family J4N37_03025 PF14437 MafB19-like deaminase J4N37_03030 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_03030 PF01464 Transglycosylase SLT domain J4N37_03035 PF02769 AIR synthase related protein, C-terminal domain J4N37_03035 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4N37_03035 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4N37_03055 PF01546 Peptidase family M20/M25/M40 J4N37_03055 PF07687 Peptidase dimerisation domain J4N37_03060 PF00860 Permease family J4N37_03065 PF00156 Phosphoribosyl transferase domain J4N37_03070 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J4N37_03075 PF07417 Sigma factor-binding transcriptional regulator Crl J4N37_03080 PF00696 Amino acid kinase family J4N37_03080 PF01472 PUA domain J4N37_03085 PF00171 Aldehyde dehydrogenase family J4N37_03090 PF03477 ATP cone domain J4N37_03095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N37_03095 PF01872 RibD C-terminal domain J4N37_03100 PF00677 Lumazine binding domain J4N37_03105 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N37_03105 PF00925 GTP cyclohydrolase II J4N37_03110 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4N37_03115 PF01029 NusB family J4N37_03120 PF00586 AIR synthase related protein, N-terminal domain J4N37_03120 PF02769 AIR synthase related protein, C-terminal domain J4N37_03125 PF04608 Phosphatidylglycerophosphatase A J4N37_03130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4N37_03130 PF02779 Transketolase, pyrimidine binding domain J4N37_03130 PF02780 Transketolase, C-terminal domain J4N37_03135 PF00348 Polyprenyl synthetase J4N37_03140 PF02609 Exonuclease VII small subunit J4N37_03145 PF01618 MotA/TolQ/ExbB proton channel family J4N37_03150 PF00691 OmpA family J4N37_03150 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N37_03155 PF02568 Thiamine biosynthesis protein (ThiI) J4N37_03155 PF02926 THUMP domain J4N37_03160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_03160 PF03466 LysR substrate binding domain J4N37_03170 PF04241 Protein of unknown function (DUF423) J4N37_03175 PF01728 FtsJ-like methyltransferase J4N37_03175 PF18125 RlmM ferredoxin-like domain J4N37_03185 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N37_03185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N37_03190 PF03641 Possible lysine decarboxylase J4N37_03190 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4N37_03190 PF11892 Domain of unknown function (DUF3412) J4N37_03195 PF00990 Diguanylate cyclase, GGDEF domain J4N37_03205 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N37_03205 PF14489 QueF-like protein J4N37_03210 PF07348 Syd protein (SUKH-2) J4N37_03215 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J4N37_03220 PF02872 5'-nucleotidase, C-terminal domain J4N37_03220 PF00149 Calcineurin-like phosphoesterase J4N37_03230 PF03180 NLPA lipoprotein J4N37_03235 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_03240 PF00005 ABC transporter J4N37_03240 PF09383 NIL domain J4N37_03250 PF00356 Bacterial regulatory proteins, lacI family J4N37_03255 PF00367 phosphotransferase system, EIIB J4N37_03255 PF02378 Phosphotransferase system, EIIC J4N37_03260 PF00128 Alpha amylase, catalytic domain J4N37_03260 PF16657 Maltogenic Amylase, C-terminal domain J4N37_03275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N37_03275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4N37_03280 PF00464 Serine hydroxymethyltransferase J4N37_03285 PF04055 Radical SAM superfamily J4N37_03285 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4N37_03290 PF03099 Biotin/lipoate A/B protein ligase family J4N37_03295 PF04359 Protein of unknown function (DUF493) J4N37_03300 PF00768 D-alanyl-D-alanine carboxypeptidase J4N37_03300 PF07943 Penicillin-binding protein 5, C-terminal domain J4N37_03305 PF03330 Lytic transglycolase J4N37_03305 PF05036 Sporulation related domain J4N37_03310 PF01098 Cell cycle protein J4N37_03315 PF00905 Penicillin binding protein transpeptidase domain J4N37_03315 PF03717 Penicillin-binding Protein dimerisation domain J4N37_03320 PF02590 Predicted SPOUT methyltransferase J4N37_03330 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J4N37_03330 PF06144 DNA polymerase III, delta subunit J4N37_03335 PF04390 Lipopolysaccharide-assembly J4N37_03340 PF08264 Anticodon-binding domain of tRNA J4N37_03340 PF13603 Leucyl-tRNA synthetase, Domain 2 J4N37_03340 PF00133 tRNA synthetases class I (I, L, M and V) J4N37_03345 PF07295 Zinc-ribbon containing domain J4N37_03350 PF00795 Carbon-nitrogen hydrolase J4N37_03355 PF00571 CBS domain J4N37_03355 PF03471 Transporter associated domain J4N37_03360 PF02130 Uncharacterized protein family UPF0054 J4N37_03365 PF02562 PhoH-like protein J4N37_03370 PF00919 Uncharacterized protein family UPF0004 J4N37_03370 PF01938 TRAM domain J4N37_03370 PF04055 Radical SAM superfamily J4N37_03375 PF01494 FAD binding domain J4N37_03485 PF01926 50S ribosome-binding GTPase J4N37_03485 PF06071 Protein of unknown function (DUF933) J4N37_03490 PF01195 Peptidyl-tRNA hydrolase J4N37_03495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4N37_03495 PF14572 Phosphoribosyl synthetase-associated domain J4N37_03500 PF00288 GHMP kinases N terminal domain J4N37_03500 PF08544 GHMP kinases C terminal J4N37_03505 PF03550 Outer membrane lipoprotein LolB J4N37_03510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4N37_03510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4N37_03510 PF01488 Shikimate / quinate 5-dehydrogenase J4N37_03515 PF00472 RF-1 domain J4N37_03515 PF03462 PCRF domain J4N37_03520 PF13847 Methyltransferase domain J4N37_03520 PF17827 PrmC N-terminal domain J4N37_03525 PF04247 Invasion gene expression up-regulator, SirB J4N37_03530 PF13369 Transglutaminase-like superfamily J4N37_03535 PF00793 DAHP synthetase I family J4N37_03540 PF00149 Calcineurin-like phosphoesterase J4N37_03540 PF02872 5'-nucleotidase, C-terminal domain J4N37_03545 PF04073 Aminoacyl-tRNA editing domain J4N37_03550 PF00849 RNA pseudouridylate synthase J4N37_03550 PF01479 S4 domain J4N37_03555 PF01713 Smr domain J4N37_03580 PF03173 Putative carbohydrate binding domain J4N37_03580 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J4N37_03580 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N37_03580 PF02838 Glycosyl hydrolase family 20, domain 2 J4N37_03600 PF00403 Heavy-metal-associated domain J4N37_03605 PF03573 outer membrane porin, OprD family J4N37_03610 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N37_03615 PF01389 OmpA-like transmembrane domain J4N37_03615 PF00691 OmpA family J4N37_03650 PF04316 Anti-sigma-28 factor, FlgM J4N37_03660 PF01584 CheW-like domain J4N37_03660 PF00072 Response regulator receiver domain J4N37_03665 PF01739 CheR methyltransferase, SAM binding domain J4N37_03665 PF03705 CheR methyltransferase, all-alpha domain J4N37_03670 PF00460 Flagella basal body rod protein J4N37_03675 PF00460 Flagella basal body rod protein J4N37_03675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_03680 PF13860 FlgD Ig-like domain J4N37_03680 PF03963 Flagellar hook capping protein - N-terminal region J4N37_03680 PF13861 FlgD Tudor-like domain J4N37_03685 PF07559 Flagellar basal body protein FlaE J4N37_03685 PF00460 Flagella basal body rod protein J4N37_03685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_03690 PF00460 Flagella basal body rod protein J4N37_03690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_03695 PF00460 Flagella basal body rod protein J4N37_03695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_03700 PF02107 Flagellar L-ring protein J4N37_03705 PF02119 Flagellar P-ring protein J4N37_03710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N37_03710 PF10135 Rod binding protein J4N37_03715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_03715 PF07196 Flagellin hook IN motif J4N37_03720 PF00669 Bacterial flagellin N-terminal helical region J4N37_03725 PF00700 Bacterial flagellin C-terminal helical region J4N37_03725 PF07196 Flagellin hook IN motif J4N37_03725 PF00669 Bacterial flagellin N-terminal helical region J4N37_03730 PF00669 Bacterial flagellin N-terminal helical region J4N37_03730 PF00700 Bacterial flagellin C-terminal helical region J4N37_03730 PF07196 Flagellin hook IN motif J4N37_03735 PF00700 Bacterial flagellin C-terminal helical region J4N37_03735 PF00669 Bacterial flagellin N-terminal helical region J4N37_03735 PF07196 Flagellin hook IN motif J4N37_03740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N37_03745 PF05524 PEP-utilising enzyme, N-terminal J4N37_03745 PF02896 PEP-utilising enzyme, TIM barrel domain J4N37_03745 PF00391 PEP-utilising enzyme, mobile domain J4N37_03750 PF00381 PTS HPr component phosphorylation site J4N37_03755 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_03765 PF04354 ZipA, C-terminal FtsZ-binding domain J4N37_03770 PF03120 NAD-dependent DNA ligase OB-fold domain J4N37_03770 PF00533 BRCA1 C Terminus (BRCT) domain J4N37_03770 PF01653 NAD-dependent DNA ligase adenylation domain J4N37_03770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4N37_03770 PF12826 Helix-hairpin-helix motif J4N37_03790 PF16200 C-terminal region of band_7 J4N37_03790 PF01145 SPFH domain / Band 7 family J4N37_03795 PF00085 Thioredoxin J4N37_03805 PF00106 short chain dehydrogenase J4N37_03810 PF08338 Domain of unknown function (DUF1731) J4N37_03810 PF01370 NAD dependent epimerase/dehydratase family J4N37_03815 PF07556 Protein of unknown function (DUF1538) J4N37_03820 PF07556 Protein of unknown function (DUF1538) J4N37_03840 PF12850 Calcineurin-like phosphoesterase superfamily domain J4N37_03855 PF17323 Trans-membrane regulatory protein ToxS J4N37_03860 PF00486 Transcriptional regulatory protein, C terminal J4N37_03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_03865 PF00183 Hsp90 protein J4N37_03870 PF05191 Adenylate kinase, active site lid J4N37_03875 PF00762 Ferrochelatase J4N37_03880 PF00854 POT family J4N37_03885 PF02357 Transcription termination factor nusG J4N37_03890 PF13537 Glutamine amidotransferase domain J4N37_03890 PF00733 Asparagine synthase J4N37_03895 PF02254 TrkA-N domain J4N37_03895 PF00999 Sodium/hydrogen exchanger family J4N37_03900 PF01047 MarR family J4N37_03900 PF00480 ROK family J4N37_03905 PF01979 Amidohydrolase family J4N37_03910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N37_03910 PF00367 phosphotransferase system, EIIB J4N37_03910 PF02378 Phosphotransferase system, EIIC J4N37_03915 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N37_03915 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4N37_03920 PF00114 Pilin (bacterial filament) J4N37_03920 PF07963 Prokaryotic N-terminal methylation motif J4N37_03925 PF01475 Ferric uptake regulator family J4N37_03935 PF00258 Flavodoxin J4N37_03945 PF12697 Alpha/beta hydrolase family J4N37_03950 PF17206 SeqA protein N-terminal domain J4N37_03950 PF03925 SeqA protein C-terminal domain J4N37_03955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N37_03955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N37_03955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N37_03955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N37_03965 PF01784 NIF3 (NGG1p interacting factor 3) J4N37_03970 PF00285 Citrate synthase, C-terminal domain J4N37_03975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N37_03980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N37_03985 PF02910 Fumarate reductase flavoprotein C-term J4N37_03985 PF00890 FAD binding domain J4N37_03990 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N37_03995 PF16078 2-oxoglutarate dehydrogenase N-terminus J4N37_03995 PF00676 Dehydrogenase E1 component J4N37_03995 PF02779 Transketolase, pyrimidine binding domain J4N37_03995 PF16870 2-oxoglutarate dehydrogenase C-terminal J4N37_04000 PF02817 e3 binding domain J4N37_04000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N37_04000 PF00364 Biotin-requiring enzyme J4N37_04005 PF00549 CoA-ligase J4N37_04005 PF08442 ATP-grasp domain J4N37_04010 PF02629 CoA binding domain J4N37_04010 PF00549 CoA-ligase J4N37_04015 PF00950 ABC 3 transport family J4N37_04020 PF00005 ABC transporter J4N37_04025 PF01297 Zinc-uptake complex component A periplasmic J4N37_04030 PF12833 Helix-turn-helix domain J4N37_04035 PF04023 FeoA domain J4N37_04040 PF07664 Ferrous iron transport protein B C terminus J4N37_04040 PF17910 FeoB cytosolic helical domain J4N37_04040 PF07670 Nucleoside recognition J4N37_04040 PF02421 Ferrous iron transport protein B J4N37_04060 PF00750 tRNA synthetases class I (R) J4N37_04060 PF05746 DALR anticodon binding domain J4N37_04060 PF03485 Arginyl tRNA synthetase N terminal domain J4N37_04065 PF06185 YecM protein J4N37_04070 PF01842 ACT domain J4N37_04070 PF00551 Formyl transferase J4N37_04080 PF04851 Type III restriction enzyme, res subunit J4N37_04080 PF13307 Helicase C-terminal domain J4N37_04085 PF00814 Glycoprotease family J4N37_04100 PF00561 alpha/beta hydrolase fold J4N37_04105 PF00501 AMP-binding enzyme J4N37_04105 PF13193 AMP-binding enzyme C-terminal domain J4N37_04110 PF01612 3'-5' exonuclease J4N37_04110 PF00570 HRDC domain J4N37_04115 PF03776 Septum formation topological specificity factor MinE J4N37_04120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N37_04125 PF03775 Septum formation inhibitor MinC, C-terminal domain J4N37_04125 PF05209 Septum formation inhibitor MinC, N-terminal domain J4N37_04130 PF05166 YcgL domain J4N37_04135 PF13406 Transglycosylase SLT domain J4N37_04140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_04140 PF03466 LysR substrate binding domain J4N37_04145 PF07670 Nucleoside recognition J4N37_04145 PF07662 Na+ dependent nucleoside transporter C-terminus J4N37_04145 PF01773 Na+ dependent nucleoside transporter N-terminus J4N37_04150 PF04480 Protein of unknown function (DUF559) J4N37_04155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4N37_04155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4N37_04220 PF00266 Aminotransferase class-V J4N37_04285 PF06715 Gp5 C-terminal repeat (3 copies) J4N37_04285 PF04717 Type VI secretion system, phage-baseplate injector J4N37_04305 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_04330 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_04330 PF07724 AAA domain (Cdc48 subfamily) J4N37_04330 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_04330 PF17871 AAA lid domain J4N37_04335 PF07478 D-ala D-ala ligase C-terminus J4N37_04355 PF16697 Inner membrane component of T3SS, cytoplasmic domain J4N37_04365 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N37_04380 PF00069 Protein kinase domain J4N37_04380 PF08239 Bacterial SH3 domain J4N37_04390 PF02805 Metal binding domain of Ada J4N37_04390 PF12833 Helix-turn-helix domain J4N37_04395 PF00571 CBS domain J4N37_04395 PF03471 Transporter associated domain J4N37_04395 PF01595 Cyclin M transmembrane N-terminal domain J4N37_04400 PF00270 DEAD/DEAH box helicase J4N37_04400 PF00271 Helicase conserved C-terminal domain J4N37_04405 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_04410 PF02254 TrkA-N domain J4N37_04410 PF02080 TrkA-C domain J4N37_04415 PF02386 Cation transport protein J4N37_04425 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4N37_04430 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N37_04435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N37_04440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N37_04445 PF00072 Response regulator receiver domain J4N37_04445 PF02954 Bacterial regulatory protein, Fis family J4N37_04445 PF00158 Sigma-54 interaction domain J4N37_04450 PF00512 His Kinase A (phospho-acceptor) domain J4N37_04450 PF02743 Cache domain J4N37_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_04455 PF05698 Bacterial trigger factor protein (TF) C-terminus J4N37_04455 PF05697 Bacterial trigger factor protein (TF) J4N37_04455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_04460 PF00574 Clp protease J4N37_04465 PF07724 AAA domain (Cdc48 subfamily) J4N37_04465 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_04465 PF06689 ClpX C4-type zinc finger J4N37_04470 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_04470 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N37_04470 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4N37_04475 PF00216 Bacterial DNA-binding protein J4N37_04480 PF13145 PPIC-type PPIASE domain J4N37_04500 PF13286 Phosphohydrolase-associated domain J4N37_04500 PF01966 HD domain J4N37_04510 PF00155 Aminotransferase class I and II J4N37_04515 PF00425 chorismate binding enzyme J4N37_04520 PF16582 Middle domain of thiamine pyrophosphate J4N37_04520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N37_04520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N37_04525 PF12697 Alpha/beta hydrolase family J4N37_04530 PF00378 Enoyl-CoA hydratase/isomerase J4N37_04535 PF13378 Enolase C-terminal domain-like J4N37_04540 PF13193 AMP-binding enzyme C-terminal domain J4N37_04540 PF00501 AMP-binding enzyme J4N37_04545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N37_04545 PF00367 phosphotransferase system, EIIB J4N37_04545 PF02378 Phosphotransferase system, EIIC J4N37_04550 PF03466 LysR substrate binding domain J4N37_04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_04560 PF03601 Conserved hypothetical protein 698 J4N37_04565 PF07690 Major Facilitator Superfamily J4N37_04610 PF13533 Biotin-lipoyl like J4N37_04615 PF00873 AcrB/AcrD/AcrF family J4N37_04625 PF13006 Insertion element 4 transposase N-terminal J4N37_04625 PF01609 Transposase DDE domain J4N37_04630 PF01610 Transposase J4N37_04630 PF13542 Helix-turn-helix domain of transposase family ISL3 J4N37_04630 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J4N37_04645 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_04650 PF01037 Lrp/AsnC ligand binding domain J4N37_04650 PF13404 AsnC-type helix-turn-helix domain J4N37_04665 PF09619 Type III secretion system lipoprotein chaperone (YscW) J4N37_04670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N37_04680 PF00990 Diguanylate cyclase, GGDEF domain J4N37_04690 PF00690 Cation transporter/ATPase, N-terminus J4N37_04690 PF00689 Cation transporting ATPase, C-terminus J4N37_04695 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N37_04695 PF00588 SpoU rRNA Methylase family J4N37_04700 PF00037 4Fe-4S binding domain J4N37_04700 PF11953 Domain of unknown function (DUF3470) J4N37_04710 PF01548 Transposase J4N37_04710 PF02371 Transposase IS116/IS110/IS902 family J4N37_04715 PF00571 CBS domain J4N37_04715 PF01743 Poly A polymerase head domain J4N37_04720 PF01554 MatE J4N37_04725 PF00403 Heavy-metal-associated domain J4N37_04730 PF01048 Phosphorylase superfamily J4N37_04740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_04740 PF00672 HAMP domain J4N37_04740 PF12729 Four helix bundle sensory module for signal transduction J4N37_04745 PF01230 HIT domain J4N37_04760 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4N37_04760 PF13036 Peptidoglycan-synthase activator LpoB J4N37_04770 PF05728 Uncharacterised protein family (UPF0227) J4N37_04775 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_04790 PF17757 UvrB interaction domain J4N37_04790 PF02559 CarD-like/TRCF domain J4N37_04790 PF00270 DEAD/DEAH box helicase J4N37_04790 PF00271 Helicase conserved C-terminal domain J4N37_04790 PF03461 TRCF domain J4N37_04800 PF02687 FtsX-like permease family J4N37_04800 PF12704 MacB-like periplasmic core domain J4N37_04805 PF00005 ABC transporter J4N37_04810 PF12704 MacB-like periplasmic core domain J4N37_04810 PF02687 FtsX-like permease family J4N37_04820 PF00753 Metallo-beta-lactamase superfamily J4N37_04820 PF13567 Domain of unknown function (DUF4131) J4N37_04820 PF03772 Competence protein J4N37_04825 PF00664 ABC transporter transmembrane region J4N37_04825 PF00005 ABC transporter J4N37_04830 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4N37_04835 PF03966 Trm112p-like protein J4N37_04840 PF02348 Cytidylyltransferase J4N37_04845 PF04293 SpoVR like protein J4N37_04850 PF04285 Protein of unknown function (DUF444) J4N37_04855 PF08298 PrkA AAA domain J4N37_04855 PF06798 PrkA serine protein kinase C-terminal domain J4N37_04865 PF03887 YfbU domain J4N37_04875 PF04055 Radical SAM superfamily J4N37_04885 PF01228 Glycine radical J4N37_04885 PF02901 Pyruvate formate lyase-like J4N37_04895 PF00005 ABC transporter J4N37_04900 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_04905 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_04910 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_04915 PF03372 Endonuclease/Exonuclease/phosphatase family J4N37_04920 PF00672 HAMP domain J4N37_04920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_04925 PF10689 Protein of unknown function (DUF2496) J4N37_04930 PF07445 Primosomal replication protein priC J4N37_04935 PF01925 Sulfite exporter TauE/SafE J4N37_04940 PF13307 Helicase C-terminal domain J4N37_04940 PF06733 DEAD_2 J4N37_04950 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N37_04955 PF00849 RNA pseudouridylate synthase J4N37_04960 PF03971 Monomeric isocitrate dehydrogenase J4N37_04965 PF00313 'Cold-shock' DNA-binding domain J4N37_04970 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4N37_04975 PF07724 AAA domain (Cdc48 subfamily) J4N37_04975 PF17871 AAA lid domain J4N37_04975 PF02861 Clp amino terminal domain, pathogenicity island component J4N37_04975 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_04975 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_04985 PF01176 Translation initiation factor 1A / IF-1 J4N37_04990 PF04376 Arginine-tRNA-protein transferase, N terminus J4N37_04990 PF04377 Arginine-tRNA-protein transferase, C terminus J4N37_04995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4N37_05005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N37_05010 PF10692 Protein of unknown function (DUF2498) J4N37_05015 PF01131 DNA topoisomerase J4N37_05015 PF01751 Toprim domain J4N37_05015 PF08272 Topoisomerase I zinc-ribbon-like J4N37_05015 PF01396 Topoisomerase DNA binding C4 zinc finger J4N37_05020 PF00483 Nucleotidyl transferase J4N37_05025 PF00534 Glycosyl transferases group 1 J4N37_05025 PF08323 Starch synthase catalytic domain J4N37_05045 PF04993 TfoX N-terminal domain J4N37_05045 PF04994 TfoX C-terminal domain J4N37_05050 PF00356 Bacterial regulatory proteins, lacI family J4N37_05055 PF02613 Nitrate reductase delta subunit J4N37_05060 PF00072 Response regulator receiver domain J4N37_05060 PF00486 Transcriptional regulatory protein, C terminal J4N37_05065 PF02698 DUF218 domain J4N37_05070 PF13847 Methyltransferase domain J4N37_05075 PF17192 MukF middle domain J4N37_05075 PF17193 MukF C-terminal domain J4N37_05075 PF03882 MukF winged-helix domain J4N37_05080 PF04288 MukE-like family J4N37_05085 PF16330 MukB hinge domain J4N37_05085 PF04310 MukB N-terminal J4N37_05095 PF08443 RimK-like ATP-grasp domain J4N37_05095 PF18030 RimK PreATP-grasp domain J4N37_05105 PF08443 RimK-like ATP-grasp domain J4N37_05105 PF18030 RimK PreATP-grasp domain J4N37_05110 PF08003 Protein of unknown function (DUF1698) J4N37_05115 PF13649 Methyltransferase domain J4N37_05120 PF01904 Protein of unknown function DUF72 J4N37_05125 PF01336 OB-fold nucleic acid binding domain J4N37_05125 PF02938 GAD domain J4N37_05125 PF00152 tRNA synthetases class II (D, K and N) J4N37_05130 PF02075 Crossover junction endodeoxyribonuclease RuvC J4N37_05135 PF00672 HAMP domain J4N37_05135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_05135 PF02203 Tar ligand binding domain homologue J4N37_05140 PF07499 RuvA, C-terminal domain J4N37_05140 PF01330 RuvA N terminal domain J4N37_05145 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4N37_05145 PF05491 RuvB C-terminal winged helix domain J4N37_05145 PF17864 RuvB AAA lid domain J4N37_05150 PF01654 Cytochrome bd terminal oxidase subunit I J4N37_05155 PF02322 Cytochrome bd terminal oxidase subunit II J4N37_05160 PF08173 Membrane bound YbgT-like protein J4N37_05170 PF03061 Thioesterase superfamily J4N37_05175 PF01618 MotA/TolQ/ExbB proton channel family J4N37_05180 PF02472 Biopolymer transport protein ExbD/TolR J4N37_05190 PF07676 WD40-like Beta Propeller Repeat J4N37_05190 PF04052 TolB amino-terminal domain J4N37_05195 PF00691 OmpA family J4N37_05200 PF16331 TolA binding protein trimerisation J4N37_05200 PF13174 Tetratricopeptide repeat J4N37_05205 PF02445 Quinolinate synthetase A protein J4N37_05215 PF03994 Domain of Unknown Function (DUF350) J4N37_05225 PF03738 Glutathionylspermidine synthase preATP-grasp J4N37_05240 PF00034 Cytochrome c J4N37_05240 PF03150 Di-haem cytochrome c peroxidase J4N37_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_05260 PF00512 His Kinase A (phospho-acceptor) domain J4N37_05260 PF09308 LuxQ, periplasmic J4N37_05260 PF00072 Response regulator receiver domain J4N37_05265 PF06610 L-alanine exporter J4N37_05290 PF13411 MerR HTH family regulatory protein J4N37_05295 PF02627 Carboxymuconolactone decarboxylase family J4N37_05300 PF03831 PhnA domain J4N37_05300 PF08274 PhnA Zinc-Ribbon J4N37_05310 PF00690 Cation transporter/ATPase, N-terminus J4N37_05310 PF00689 Cation transporting ATPase, C-terminus J4N37_05320 PF00893 Small Multidrug Resistance protein J4N37_05325 PF00893 Small Multidrug Resistance protein J4N37_05345 PF00672 HAMP domain J4N37_05345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_05345 PF02743 Cache domain J4N37_05350 PF00529 HlyD membrane-fusion protein of T1SS J4N37_05350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_05355 PF00873 AcrB/AcrD/AcrF family J4N37_05380 PF00474 Sodium:solute symporter family J4N37_05400 PF00929 Exonuclease J4N37_05400 PF14579 Helix-hairpin-helix motif J4N37_05400 PF02811 PHP domain J4N37_05400 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N37_05400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N37_05405 PF00571 CBS domain J4N37_05410 PF07729 FCD domain J4N37_05410 PF00392 Bacterial regulatory proteins, gntR family J4N37_05420 PF07729 FCD domain J4N37_05420 PF00392 Bacterial regulatory proteins, gntR family J4N37_05455 PF03372 Endonuclease/Exonuclease/phosphatase family J4N37_05470 PF01752 Collagenase J4N37_05470 PF08453 Peptidase family M9 N-terminal J4N37_05470 PF04151 Bacterial pre-peptidase C-terminal domain J4N37_05485 PF05426 Alginate lyase J4N37_05485 PF07940 Heparinase II/III-like protein J4N37_05490 PF05426 Alginate lyase J4N37_05490 PF07940 Heparinase II/III-like protein J4N37_05495 PF07883 Cupin domain J4N37_05500 PF00294 pfkB family carbohydrate kinase J4N37_05505 PF01081 KDPG and KHG aldolase J4N37_05510 PF00474 Sodium:solute symporter family J4N37_05520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N37_05520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N37_05525 PF00141 Peroxidase J4N37_05535 PF00579 tRNA synthetases class I (W and Y) J4N37_05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_05540 PF02743 Cache domain J4N37_05540 PF00672 HAMP domain J4N37_05555 PF00672 HAMP domain J4N37_05555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_05560 PF03886 ABC-type transport auxiliary lipoprotein component J4N37_05565 PF02470 MlaD protein J4N37_05570 PF04403 Paraquat-inducible protein A J4N37_05575 PF01966 HD domain J4N37_05580 PF03466 LysR substrate binding domain J4N37_05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_05590 PF11412 Disulphide bond corrector protein DsbC J4N37_05590 PF02683 Cytochrome C biogenesis protein transmembrane region J4N37_05595 PF00085 Thioredoxin J4N37_05600 PF01938 TRAM domain J4N37_05600 PF05958 tRNA (Uracil-5-)-methyltransferase J4N37_05605 PF00583 Acetyltransferase (GNAT) family J4N37_05610 PF13302 Acetyltransferase (GNAT) domain J4N37_05625 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_05625 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_05625 PF12464 Maltose acetyltransferase J4N37_05630 PF00583 Acetyltransferase (GNAT) family J4N37_05640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_05650 PF12704 MacB-like periplasmic core domain J4N37_05650 PF00005 ABC transporter J4N37_05650 PF02687 FtsX-like permease family J4N37_05655 PF00005 ABC transporter J4N37_05655 PF02687 FtsX-like permease family J4N37_05655 PF12704 MacB-like periplasmic core domain J4N37_05660 PF00005 ABC transporter J4N37_05660 PF02687 FtsX-like permease family J4N37_05660 PF12704 MacB-like periplasmic core domain J4N37_05665 PF00356 Bacterial regulatory proteins, lacI family J4N37_05670 PF00128 Alpha amylase, catalytic domain J4N37_05670 PF11896 Domain of unknown function (DUF3416) J4N37_05675 PF01547 Bacterial extracellular solute-binding protein J4N37_05680 PF11490 DNA polymerase III polC-type N-terminus II J4N37_05680 PF00929 Exonuclease J4N37_05680 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N37_05680 PF14579 Helix-hairpin-helix motif J4N37_05680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N37_05680 PF02811 PHP domain J4N37_05695 PF01810 LysE type translocator J4N37_05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_05700 PF03466 LysR substrate binding domain J4N37_05710 PF08267 Cobalamin-independent synthase, N-terminal domain J4N37_05710 PF01717 Cobalamin-independent synthase, Catalytic domain J4N37_05730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4N37_05730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4N37_05735 PF02653 Branched-chain amino acid transport system / permease component J4N37_05740 PF02653 Branched-chain amino acid transport system / permease component J4N37_05745 PF00005 ABC transporter J4N37_05760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_05760 PF00529 HlyD membrane-fusion protein of T1SS J4N37_05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_05765 PF03466 LysR substrate binding domain J4N37_05785 PF00672 HAMP domain J4N37_05785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_05785 PF00512 His Kinase A (phospho-acceptor) domain J4N37_05790 PF00072 Response regulator receiver domain J4N37_05790 PF00486 Transcriptional regulatory protein, C terminal J4N37_05795 PF00535 Glycosyl transferase family 2 J4N37_05800 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase J4N37_05810 PF13309 HTH domain J4N37_05810 PF08348 YheO-like PAS domain J4N37_05815 PF01042 Endoribonuclease L-PSP J4N37_05820 PF00375 Sodium:dicarboxylate symporter family J4N37_05825 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_05825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N37_05830 PF11842 Domain of unknown function (DUF3362) J4N37_05830 PF04055 Radical SAM superfamily J4N37_05830 PF08497 Radical SAM N-terminal J4N37_05835 PF00563 EAL domain J4N37_05835 PF01590 GAF domain J4N37_05835 PF00990 Diguanylate cyclase, GGDEF domain J4N37_05835 PF00360 Phytochrome region J4N37_05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_05850 PF03466 LysR substrate binding domain J4N37_05855 PF01717 Cobalamin-independent synthase, Catalytic domain J4N37_05855 PF08267 Cobalamin-independent synthase, N-terminal domain J4N37_05865 PF03795 YCII-related domain J4N37_05870 PF03061 Thioesterase superfamily J4N37_05875 PF04279 Intracellular septation protein A J4N37_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_05885 PF00072 Response regulator receiver domain J4N37_05890 PF17327 Acyl homoserine lactone synthase J4N37_05895 PF00375 Sodium:dicarboxylate symporter family J4N37_05900 PF00290 Tryptophan synthase alpha chain J4N37_05905 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_05910 PF00218 Indole-3-glycerol phosphate synthase J4N37_05910 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4N37_05915 PF02885 Glycosyl transferase family, helical bundle domain J4N37_05915 PF00591 Glycosyl transferase family, a/b domain J4N37_05920 PF00117 Glutamine amidotransferase class-I J4N37_05925 PF04715 Anthranilate synthase component I, N terminal region J4N37_05925 PF00425 chorismate binding enzyme J4N37_05930 PF08056 Tryptophan operon leader peptide J4N37_05935 PF02811 PHP domain J4N37_05940 PF01300 Telomere recombination J4N37_05950 PF00849 RNA pseudouridylate synthase J4N37_05950 PF01479 S4 domain J4N37_05955 PF04269 Protein of unknown function, DUF440 J4N37_05960 PF01132 Elongation factor P (EF-P) OB domain J4N37_05960 PF08207 Elongation factor P (EF-P) KOW-like domain J4N37_05960 PF09285 Elongation factor P, C-terminal J4N37_05970 PF00136 DNA polymerase family B J4N37_05970 PF03104 DNA polymerase family B, exonuclease domain J4N37_05985 PF00072 Response regulator receiver domain J4N37_05985 PF00196 Bacterial regulatory proteins, luxR family J4N37_05990 PF01541 GIY-YIG catalytic domain J4N37_05990 PF02151 UvrB/uvrC motif J4N37_05990 PF08459 UvrC Helix-hairpin-helix N-terminal J4N37_05995 PF01066 CDP-alcohol phosphatidyltransferase J4N37_06020 PF00202 Aminotransferase class-III J4N37_06025 PF16653 Saccharopine dehydrogenase C-terminal domain J4N37_06025 PF03435 Saccharopine dehydrogenase NADP binding domain J4N37_06030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N37_06045 PF00994 Probable molybdopterin binding domain J4N37_06055 PF00268 Ribonucleotide reductase, small chain J4N37_06060 PF03477 ATP cone domain J4N37_06060 PF02867 Ribonucleotide reductase, barrel domain J4N37_06060 PF00317 Ribonucleotide reductase, all-alpha domain J4N37_06070 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N37_06070 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N37_06085 PF02335 Cytochrome c552 J4N37_06095 PF13247 4Fe-4S dicluster domain J4N37_06100 PF03916 Polysulphide reductase, NrfD J4N37_06105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N37_06105 PF01578 Cytochrome C assembly protein J4N37_06110 PF08534 Redoxin J4N37_06115 PF03918 Cytochrome C biogenesis protein J4N37_06125 PF00925 GTP cyclohydrolase II J4N37_06150 PF03734 L,D-transpeptidase catalytic domain J4N37_06150 PF01471 Putative peptidoglycan binding domain J4N37_06155 PF05951 Bacterial protein of unknown function (DUF882) J4N37_06160 PF00753 Metallo-beta-lactamase superfamily J4N37_06175 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N37_06185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N37_06190 PF07730 Histidine kinase J4N37_06190 PF17200 Single Cache domain 2 J4N37_06195 PF00196 Bacterial regulatory proteins, luxR family J4N37_06195 PF00072 Response regulator receiver domain J4N37_06200 PF01047 MarR family J4N37_06205 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_06210 PF00672 HAMP domain J4N37_06230 PF00155 Aminotransferase class I and II J4N37_06235 PF01966 HD domain J4N37_06235 PF00672 HAMP domain J4N37_06250 PF00392 Bacterial regulatory proteins, gntR family J4N37_06250 PF00155 Aminotransferase class I and II J4N37_06265 PF00152 tRNA synthetases class II (D, K and N) J4N37_06265 PF01336 OB-fold nucleic acid binding domain J4N37_06270 PF02743 Cache domain J4N37_06270 PF00672 HAMP domain J4N37_06270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_06275 PF01242 6-pyruvoyl tetrahydropterin synthase J4N37_06280 PF13520 Amino acid permease J4N37_06285 PF01810 LysE type translocator J4N37_06290 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N37_06295 PF00939 Sodium:sulfate symporter transmembrane region J4N37_06300 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_06300 PF00512 His Kinase A (phospho-acceptor) domain J4N37_06305 PF02954 Bacterial regulatory protein, Fis family J4N37_06305 PF00072 Response regulator receiver domain J4N37_06305 PF00158 Sigma-54 interaction domain J4N37_06310 PF17158 Membrane-associated sensor, integral membrane domain J4N37_06310 PF00990 Diguanylate cyclase, GGDEF domain J4N37_06315 PF00990 Diguanylate cyclase, GGDEF domain J4N37_06315 PF00563 EAL domain J4N37_06320 PF11871 Domain of unknown function (DUF3391) J4N37_06320 PF01966 HD domain J4N37_06325 PF01810 LysE type translocator J4N37_06330 PF11230 Protein of unknown function (DUF3029) J4N37_06335 PF04055 Radical SAM superfamily J4N37_06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_06340 PF03466 LysR substrate binding domain J4N37_06345 PF03741 Integral membrane protein TerC family J4N37_06355 PF01966 HD domain J4N37_06360 PF00106 short chain dehydrogenase J4N37_06365 PF00990 Diguanylate cyclase, GGDEF domain J4N37_06375 PF00465 Iron-containing alcohol dehydrogenase J4N37_06380 PF03222 Tryptophan/tyrosine permease family J4N37_06395 PF00005 ABC transporter J4N37_06400 PF01497 Periplasmic binding protein J4N37_06405 PF01032 FecCD transport family J4N37_06410 PF07715 TonB-dependent Receptor Plug Domain J4N37_06410 PF00593 TonB dependent receptor J4N37_06420 PF00005 ABC transporter J4N37_06420 PF00664 ABC transporter transmembrane region J4N37_06425 PF00664 ABC transporter transmembrane region J4N37_06425 PF00005 ABC transporter J4N37_06460 PF00293 NUDIX domain J4N37_06470 PF03691 Uncharacterised protein family (UPF0167) J4N37_06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_06505 PF03466 LysR substrate binding domain J4N37_06515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N37_06515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N37_06530 PF00012 Hsp70 protein J4N37_06535 PF00012 Hsp70 protein J4N37_06545 PF17156 Gammaproteobacterial periplasmic sensor domain J4N37_06545 PF00990 Diguanylate cyclase, GGDEF domain J4N37_06585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N37_06585 PF00384 Molybdopterin oxidoreductase J4N37_06585 PF01568 Molydopterin dinucleotide binding domain J4N37_06590 PF13247 4Fe-4S dicluster domain J4N37_06590 PF12800 4Fe-4S binding domain J4N37_06595 PF04976 DMSO reductase anchor subunit (DmsC) J4N37_06600 PF02613 Nitrate reductase delta subunit J4N37_06610 PF02525 Flavodoxin-like fold J4N37_06615 PF00270 DEAD/DEAH box helicase J4N37_06615 PF11898 Domain of unknown function (DUF3418) J4N37_06615 PF04408 Helicase associated domain (HA2) J4N37_06615 PF00271 Helicase conserved C-terminal domain J4N37_06615 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N37_06630 PF01048 Phosphorylase superfamily J4N37_06655 PF01546 Peptidase family M20/M25/M40 J4N37_06655 PF07687 Peptidase dimerisation domain J4N37_06660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_06660 PF00529 HlyD membrane-fusion protein of T1SS J4N37_06665 PF00873 AcrB/AcrD/AcrF family J4N37_06670 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4N37_06675 PF00196 Bacterial regulatory proteins, luxR family J4N37_06675 PF17874 MalT-like TPR region J4N37_06710 PF01810 LysE type translocator J4N37_06720 PF01235 Sodium:alanine symporter family J4N37_06740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_06745 PF04209 homogentisate 1,2-dioxygenase J4N37_06755 PF02798 Glutathione S-transferase, N-terminal domain J4N37_06755 PF14497 Glutathione S-transferase, C-terminal domain J4N37_06800 PF00582 Universal stress protein family J4N37_06805 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family J4N37_06810 PF00924 Mechanosensitive ion channel J4N37_06815 PF03729 Short repeat of unknown function (DUF308) J4N37_06830 PF01047 MarR family J4N37_06840 PF01928 CYTH domain J4N37_06850 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_06850 PF12464 Maltose acetyltransferase J4N37_06870 PF00672 HAMP domain J4N37_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_06870 PF00512 His Kinase A (phospho-acceptor) domain J4N37_06870 PF01627 Hpt domain J4N37_06870 PF00072 Response regulator receiver domain J4N37_06870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N37_06880 PF02397 Bacterial sugar transferase J4N37_06890 PF13439 Glycosyltransferase Family 4 J4N37_06890 PF00534 Glycosyl transferases group 1 J4N37_06920 PF00534 Glycosyl transferases group 1 J4N37_06930 PF00072 Response regulator receiver domain J4N37_06930 PF02954 Bacterial regulatory protein, Fis family J4N37_06930 PF00158 Sigma-54 interaction domain J4N37_06945 PF02563 Polysaccharide biosynthesis/export protein J4N37_06945 PF10531 SLBB domain J4N37_06950 PF00691 OmpA family J4N37_06955 PF01740 STAS domain J4N37_06960 PF14743 DNA ligase OB-like domain J4N37_06960 PF01068 ATP dependent DNA ligase domain J4N37_06970 PF01554 MatE J4N37_06975 PF00677 Lumazine binding domain J4N37_06985 PF03881 Fructosamine kinase J4N37_06990 PF00072 Response regulator receiver domain J4N37_06995 PF00990 Diguanylate cyclase, GGDEF domain J4N37_06995 PF05230 MASE2 domain J4N37_07005 PF00877 NlpC/P60 family J4N37_07010 PF00672 HAMP domain J4N37_07010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_07020 PF00069 Protein kinase domain J4N37_07020 PF03793 PASTA domain J4N37_07035 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N37_07055 PF17871 AAA lid domain J4N37_07055 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_07055 PF07724 AAA domain (Cdc48 subfamily) J4N37_07055 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_07075 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_07080 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_07110 PF04717 Type VI secretion system, phage-baseplate injector J4N37_07110 PF06715 Gp5 C-terminal repeat (3 copies) J4N37_07130 PF00285 Citrate synthase, C-terminal domain J4N37_07135 PF00330 Aconitase family (aconitate hydratase) J4N37_07135 PF00694 Aconitase C-terminal domain J4N37_07140 PF04303 PrpF protein J4N37_07145 PF13193 AMP-binding enzyme C-terminal domain J4N37_07145 PF00501 AMP-binding enzyme J4N37_07145 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N37_07155 PF01544 CorA-like Mg2+ transporter protein J4N37_07175 PF04055 Radical SAM superfamily J4N37_07180 PF06508 Queuosine biosynthesis protein QueC J4N37_07185 PF00990 Diguanylate cyclase, GGDEF domain J4N37_07185 PF17158 Membrane-associated sensor, integral membrane domain J4N37_07215 PF00691 OmpA family J4N37_07215 PF05736 OprF membrane domain J4N37_07230 PF10672 S-adenosylmethionine-dependent methyltransferase J4N37_07230 PF17785 PUA-like domain J4N37_07235 PF02743 Cache domain J4N37_07235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_07235 PF00672 HAMP domain J4N37_07240 PF00708 Acylphosphatase J4N37_07245 PF04358 DsrC like protein J4N37_07255 PF01027 Inhibitor of apoptosis-promoting Bax1 J4N37_07260 PF00005 ABC transporter J4N37_07265 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_07270 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_07275 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_07280 PF10414 Sirohaem synthase dimerisation region J4N37_07280 PF14824 Sirohaem biosynthesis protein central J4N37_07280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N37_07285 PF04461 Protein of unknown function (DUF520) J4N37_07290 PF00793 DAHP synthetase I family J4N37_07310 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J4N37_07310 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J4N37_07310 PF01189 16S rRNA methyltransferase RsmB/F J4N37_07315 PF02470 MlaD protein J4N37_07320 PF04403 Paraquat-inducible protein A J4N37_07325 PF00005 ABC transporter J4N37_07325 PF00664 ABC transporter transmembrane region J4N37_07330 PF13185 GAF domain J4N37_07335 PF04352 ProQ/FINO family J4N37_07335 PF17516 ProQ C-terminal domain J4N37_07340 PF03572 Peptidase family S41 J4N37_07340 PF11818 C-terminal domain of tail specific protease (DUF3340) J4N37_07340 PF00595 PDZ domain J4N37_07340 PF17804 Tail specific protease N-terminal domain J4N37_07350 PF01433 Peptidase family M1 domain J4N37_07350 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4N37_07350 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4N37_07360 PF05088 Bacterial NAD-glutamate dehydrogenase J4N37_07365 PF01180 Dihydroorotate dehydrogenase J4N37_07370 PF07126 Cell-division protein ZapC J4N37_07375 PF10672 S-adenosylmethionine-dependent methyltransferase J4N37_07375 PF02926 THUMP domain J4N37_07375 PF01170 Putative RNA methylase family UPF0020 J4N37_07385 PF16326 ABC transporter C-terminal domain J4N37_07385 PF00005 ABC transporter J4N37_07385 PF12848 ABC transporter J4N37_07395 PF04957 Ribosome modulation factor J4N37_07405 PF07977 FabA-like domain J4N37_07410 PF13654 AAA domain J4N37_07410 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N37_07415 PF06303 MatP N-terminal domain J4N37_07415 PF17414 MatP C-terminal ribbon-helix-helix domain J4N37_07440 PF00512 His Kinase A (phospho-acceptor) domain J4N37_07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_07440 PF09308 LuxQ, periplasmic J4N37_07440 PF00072 Response regulator receiver domain J4N37_07455 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N37_07470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N37_07470 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4N37_07480 PF00403 Heavy-metal-associated domain J4N37_07495 PF00027 Cyclic nucleotide-binding domain J4N37_07495 PF13545 Crp-like helix-turn-helix domain J4N37_07500 PF00582 Universal stress protein family J4N37_07505 PF01171 PP-loop family J4N37_07525 PF00005 ABC transporter J4N37_07525 PF08402 TOBE domain J4N37_07530 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_07535 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_07540 PF13416 Bacterial extracellular solute-binding protein J4N37_07545 PF13416 Bacterial extracellular solute-binding protein J4N37_07550 PF02146 Sir2 family J4N37_07570 PF05593 RHS Repeat J4N37_07570 PF03527 RHS protein J4N37_07585 PF13247 4Fe-4S dicluster domain J4N37_07590 PF01568 Molydopterin dinucleotide binding domain J4N37_07590 PF00384 Molybdopterin oxidoreductase J4N37_07590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N37_07600 PF02613 Nitrate reductase delta subunit J4N37_07620 PF02634 FdhD/NarQ family J4N37_07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_07625 PF02743 Cache domain J4N37_07625 PF00672 HAMP domain J4N37_07630 PF12848 ABC transporter J4N37_07630 PF00005 ABC transporter J4N37_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_07645 PF00512 His Kinase A (phospho-acceptor) domain J4N37_07650 PF02954 Bacterial regulatory protein, Fis family J4N37_07650 PF00158 Sigma-54 interaction domain J4N37_07650 PF00072 Response regulator receiver domain J4N37_07655 PF12849 PBP superfamily domain J4N37_07660 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_07665 PF00005 ABC transporter J4N37_07665 PF08402 TOBE domain J4N37_07670 PF12804 MobA-like NTP transferase domain J4N37_07675 PF03453 MoeA N-terminal region (domain I and II) J4N37_07675 PF03454 MoeA C-terminal region (domain IV) J4N37_07675 PF00994 Probable molybdopterin binding domain J4N37_07690 PF00480 ROK family J4N37_07695 PF03942 DTW domain J4N37_07755 PF01970 Tripartite tricarboxylate transporter TctA family J4N37_07760 PF01925 Sulfite exporter TauE/SafE J4N37_07765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_07765 PF02743 Cache domain J4N37_07765 PF00672 HAMP domain J4N37_07770 PF16868 NMT1-like family J4N37_07775 PF00072 Response regulator receiver domain J4N37_07780 PF00171 Aldehyde dehydrogenase family J4N37_07785 PF00158 Sigma-54 interaction domain J4N37_07785 PF02954 Bacterial regulatory protein, Fis family J4N37_07785 PF01590 GAF domain J4N37_07810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N37_07810 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N37_07815 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N37_07820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4N37_07820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4N37_07825 PF12833 Helix-turn-helix domain J4N37_07830 PF07715 TonB-dependent Receptor Plug Domain J4N37_07830 PF00593 TonB dependent receptor J4N37_07835 PF12431 Transcriptional regulator J4N37_07835 PF00072 Response regulator receiver domain J4N37_07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_07840 PF00989 PAS fold J4N37_07840 PF17203 Single cache domain 3 J4N37_07840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4N37_07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_07875 PF03466 LysR substrate binding domain J4N37_07895 PF16363 GDP-mannose 4,6 dehydratase J4N37_07900 PF03466 LysR substrate binding domain J4N37_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_07910 PF01794 Ferric reductase like transmembrane component J4N37_07915 PF00174 Oxidoreductase molybdopterin binding domain J4N37_07920 PF00892 EamA-like transporter family J4N37_07925 PF12833 Helix-turn-helix domain J4N37_07925 PF12852 Cupin J4N37_07940 PF00893 Small Multidrug Resistance protein J4N37_07945 PF00144 Beta-lactamase J4N37_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_07960 PF03466 LysR substrate binding domain J4N37_07965 PF07690 Major Facilitator Superfamily J4N37_07975 PF05368 NmrA-like family J4N37_07980 PF03466 LysR substrate binding domain J4N37_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_07985 PF05922 Peptidase inhibitor I9 J4N37_07985 PF00082 Subtilase family J4N37_07985 PF04151 Bacterial pre-peptidase C-terminal domain J4N37_07990 PF03150 Di-haem cytochrome c peroxidase J4N37_07990 PF00034 Cytochrome c J4N37_08000 PF02371 Transposase IS116/IS110/IS902 family J4N37_08000 PF01548 Transposase J4N37_08005 PF00696 Amino acid kinase family J4N37_08005 PF13840 ACT domain J4N37_08010 PF06339 Ectoine synthase J4N37_08015 PF00202 Aminotransferase class-III J4N37_08020 PF00583 Acetyltransferase (GNAT) family J4N37_08025 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_08035 PF00571 CBS domain J4N37_08040 PF01554 MatE J4N37_08045 PF01406 tRNA synthetases class I (C) catalytic domain J4N37_08050 PF00884 Sulfatase J4N37_08060 PF02311 AraC-like ligand binding domain J4N37_08060 PF12833 Helix-turn-helix domain J4N37_08085 PF13276 HTH-like domain J4N37_08085 PF13333 Integrase core domain J4N37_08085 PF00665 Integrase core domain J4N37_08100 PF13333 Integrase core domain J4N37_08100 PF00665 Integrase core domain J4N37_08100 PF13276 HTH-like domain J4N37_08200 PF00665 Integrase core domain J4N37_08200 PF13333 Integrase core domain J4N37_08200 PF13276 HTH-like domain J4N37_08260 PF13419 Haloacid dehalogenase-like hydrolase J4N37_08430 PF04229 GrpB protein J4N37_08445 PF13676 TIR domain J4N37_08470 PF00665 Integrase core domain J4N37_08470 PF13276 HTH-like domain J4N37_08470 PF13333 Integrase core domain J4N37_08560 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_08835 PF01810 LysE type translocator J4N37_08890 PF08378 Nuclease-related domain J4N37_08960 PF13649 Methyltransferase domain J4N37_08975 PF04229 GrpB protein J4N37_09140 PF08378 Nuclease-related domain J4N37_09235 PF00589 Phage integrase family J4N37_09235 PF13495 Phage integrase, N-terminal SAM-like domain J4N37_09250 PF13302 Acetyltransferase (GNAT) domain J4N37_09255 PF18024 Helix-turn-helix domain J4N37_09255 PF00158 Sigma-54 interaction domain J4N37_09260 PF05128 Domain of unknown function (DUF697) J4N37_09265 PF04317 YcjX-like family, DUF463 J4N37_09280 PF04715 Anthranilate synthase component I, N terminal region J4N37_09280 PF00425 chorismate binding enzyme J4N37_09285 PF00072 Response regulator receiver domain J4N37_09285 PF00512 His Kinase A (phospho-acceptor) domain J4N37_09285 PF09308 LuxQ, periplasmic J4N37_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_09295 PF00293 NUDIX domain J4N37_09300 PF03222 Tryptophan/tyrosine permease family J4N37_09305 PF03315 Serine dehydratase beta chain J4N37_09305 PF03313 Serine dehydratase alpha chain J4N37_09310 PF13188 PAS domain J4N37_09310 PF00990 Diguanylate cyclase, GGDEF domain J4N37_09310 PF00563 EAL domain J4N37_09310 PF03707 Bacterial signalling protein N terminal repeat J4N37_09325 PF00196 Bacterial regulatory proteins, luxR family J4N37_09325 PF00072 Response regulator receiver domain J4N37_09330 PF00893 Small Multidrug Resistance protein J4N37_09340 PF04204 Homoserine O-succinyltransferase J4N37_09360 PF05971 RNA methyltransferase J4N37_09365 PF01863 Protein of unknown function DUF45 J4N37_09370 PF04991 LicD family J4N37_09375 PF16363 GDP-mannose 4,6 dehydratase J4N37_09380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4N37_09410 PF03466 LysR substrate binding domain J4N37_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_09415 PF07690 Major Facilitator Superfamily J4N37_09435 PF00005 ABC transporter J4N37_09440 PF01032 FecCD transport family J4N37_09445 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N37_09460 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4N37_09465 PF02654 Cobalamin-5-phosphate synthase J4N37_09470 PF02277 Phosphoribosyltransferase J4N37_09475 PF01613 Flavin reductase like domain J4N37_09480 PF13460 NAD(P)H-binding J4N37_09485 PF08411 Exonuclease C-terminal J4N37_09485 PF00929 Exonuclease J4N37_09490 PF03788 LrgA family J4N37_09495 PF04172 LrgB-like family J4N37_09500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N37_09500 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J4N37_09505 PF02371 Transposase IS116/IS110/IS902 family J4N37_09505 PF01548 Transposase J4N37_09510 PF02222 ATP-grasp domain J4N37_09515 PF05724 Thiopurine S-methyltransferase (TPMT) J4N37_09525 PF00216 Bacterial DNA-binding protein J4N37_09540 PF03147 Ferredoxin-fold anticodon binding domain J4N37_09540 PF03483 B3/4 domain J4N37_09540 PF03484 tRNA synthetase B5 domain J4N37_09540 PF01588 Putative tRNA binding domain J4N37_09540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4N37_09545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4N37_09545 PF01409 tRNA synthetases class II core domain (F) J4N37_09550 PF00990 Diguanylate cyclase, GGDEF domain J4N37_09550 PF00072 Response regulator receiver domain J4N37_09565 PF01906 Putative heavy-metal-binding J4N37_09570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_09575 PF01042 Endoribonuclease L-PSP J4N37_09590 PF00453 Ribosomal protein L20 J4N37_09595 PF01632 Ribosomal protein L35 J4N37_09600 PF00707 Translation initiation factor IF-3, C-terminal domain J4N37_09600 PF05198 Translation initiation factor IF-3, N-terminal domain J4N37_09605 PF03129 Anticodon binding domain J4N37_09605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N37_09605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N37_09605 PF02824 TGS domain J4N37_09620 PF07702 UTRA domain J4N37_09620 PF00392 Bacterial regulatory proteins, gntR family J4N37_09625 PF01979 Amidohydrolase family J4N37_09630 PF00491 Arginase family J4N37_09635 PF01175 Urocanase Rossmann-like domain J4N37_09635 PF17392 Urocanase C-terminal domain J4N37_09635 PF17391 Urocanase N-terminal domain J4N37_09640 PF00221 Aromatic amino acid lyase J4N37_09655 PF02913 FAD linked oxidases, C-terminal domain J4N37_09655 PF01565 FAD binding domain J4N37_09655 PF13183 4Fe-4S dicluster domain J4N37_09670 PF05736 OprF membrane domain J4N37_09670 PF00691 OmpA family J4N37_09690 PF01259 SAICAR synthetase J4N37_09705 PF16655 PhoD-like phosphatase, N-terminal domain J4N37_09705 PF09423 PhoD-like phosphatase J4N37_09715 PF02253 Phospholipase A1 J4N37_09720 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N37_09720 PF00270 DEAD/DEAH box helicase J4N37_09720 PF11898 Domain of unknown function (DUF3418) J4N37_09720 PF00271 Helicase conserved C-terminal domain J4N37_09720 PF04408 Helicase associated domain (HA2) J4N37_09725 PF00390 Malic enzyme, N-terminal domain J4N37_09725 PF03949 Malic enzyme, NAD binding domain J4N37_09730 PF02698 DUF218 domain J4N37_09735 PF00939 Sodium:sulfate symporter transmembrane region J4N37_09740 PF00072 Response regulator receiver domain J4N37_09740 PF00990 Diguanylate cyclase, GGDEF domain J4N37_09750 PF00266 Aminotransferase class-V J4N37_09760 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_09765 PF00664 ABC transporter transmembrane region J4N37_09765 PF00005 ABC transporter J4N37_09770 PF00664 ABC transporter transmembrane region J4N37_09770 PF00005 ABC transporter J4N37_09775 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_09780 PF02447 GntP family permease J4N37_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_09785 PF03466 LysR substrate binding domain J4N37_09790 PF00990 Diguanylate cyclase, GGDEF domain J4N37_09800 PF00266 Aminotransferase class-V J4N37_09810 PF00512 His Kinase A (phospho-acceptor) domain J4N37_09810 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_09825 PF04993 TfoX N-terminal domain J4N37_09825 PF04994 TfoX C-terminal domain J4N37_09835 PF03956 Lysine exporter LysO J4N37_09845 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4N37_09850 PF01418 Helix-turn-helix domain, rpiR family J4N37_09850 PF01380 SIS domain J4N37_09855 PF00465 Iron-containing alcohol dehydrogenase J4N37_09860 PF00462 Glutaredoxin J4N37_09865 PF06826 Predicted Permease Membrane Region J4N37_09865 PF02080 TrkA-C domain J4N37_09870 PF07055 Enoyl reductase FAD binding domain J4N37_09870 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N37_09870 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N37_09875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N37_09875 PF02770 Acyl-CoA dehydrogenase, middle domain J4N37_09875 PF09317 Domain of unknown function (DUF1974) J4N37_09875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N37_09880 PF16295 Tetracyclin repressor-like, C-terminal domain J4N37_09880 PF00440 Bacterial regulatory proteins, tetR family J4N37_09885 PF06965 Na+/H+ antiporter 1 J4N37_09900 PF00005 ABC transporter J4N37_09905 PF01554 MatE J4N37_09910 PF13460 NAD(P)H-binding J4N37_09910 PF11066 Protein of unknown function (DUF2867) J4N37_09915 PF00356 Bacterial regulatory proteins, lacI family J4N37_09920 PF16875 Glycosyl hydrolase family 36 N-terminal domain J4N37_09920 PF16874 Glycosyl hydrolase family 36 C-terminal domain J4N37_09925 PF00474 Sodium:solute symporter family J4N37_09935 PF07690 Major Facilitator Superfamily J4N37_09940 PF01479 S4 domain J4N37_09940 PF00849 RNA pseudouridylate synthase J4N37_09945 PF00271 Helicase conserved C-terminal domain J4N37_09945 PF04851 Type III restriction enzyme, res subunit J4N37_09955 PF00072 Response regulator receiver domain J4N37_09955 PF00486 Transcriptional regulatory protein, C terminal J4N37_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_09970 PF00535 Glycosyl transferase family 2 J4N37_09975 PF01386 Ribosomal L25p family J4N37_09990 PF00149 Calcineurin-like phosphoesterase J4N37_09990 PF02872 5'-nucleotidase, C-terminal domain J4N37_10000 PF06945 Protein of unknown function (DUF1289) J4N37_10010 PF01740 STAS domain J4N37_10010 PF00916 Sulfate permease family J4N37_10020 PF00196 Bacterial regulatory proteins, luxR family J4N37_10020 PF00072 Response regulator receiver domain J4N37_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_10025 PF00512 His Kinase A (phospho-acceptor) domain J4N37_10035 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_10035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N37_10045 PF09335 SNARE associated Golgi protein J4N37_10050 PF13416 Bacterial extracellular solute-binding protein J4N37_10055 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_10060 PF00005 ABC transporter J4N37_10065 PF01066 CDP-alcohol phosphatidyltransferase J4N37_10075 PF00158 Sigma-54 interaction domain J4N37_10075 PF01590 GAF domain J4N37_10080 PF03063 Prismane/CO dehydrogenase family J4N37_10085 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_10085 PF00175 Oxidoreductase NAD-binding domain J4N37_10085 PF00970 Oxidoreductase FAD-binding domain J4N37_10095 PF00849 RNA pseudouridylate synthase J4N37_10100 PF00672 HAMP domain J4N37_10100 PF12729 Four helix bundle sensory module for signal transduction J4N37_10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_10105 PF00209 Sodium:neurotransmitter symporter family J4N37_10110 PF13091 PLD-like domain J4N37_10110 PF13396 Phospholipase_D-nuclease N-terminal J4N37_10115 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N37_10120 PF00561 alpha/beta hydrolase fold J4N37_10125 PF03280 Proteobacterial lipase chaperone protein J4N37_10130 PF03352 Methyladenine glycosylase J4N37_10135 PF00873 AcrB/AcrD/AcrF family J4N37_10140 PF13533 Biotin-lipoyl like J4N37_10145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_10155 PF06667 Phage shock protein B J4N37_10160 PF04012 PspA/IM30 family J4N37_10165 PF02954 Bacterial regulatory protein, Fis family J4N37_10165 PF00158 Sigma-54 interaction domain J4N37_10170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_10175 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_10180 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_10180 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_10185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_10185 PF00005 ABC transporter J4N37_10190 PF00005 ABC transporter J4N37_10200 PF02833 DHHA2 domain J4N37_10200 PF01368 DHH family J4N37_10210 PF16874 Glycosyl hydrolase family 36 C-terminal domain J4N37_10210 PF16875 Glycosyl hydrolase family 36 N-terminal domain J4N37_10215 PF01568 Molydopterin dinucleotide binding domain J4N37_10215 PF18364 Molybdopterin oxidoreductase N-terminal domain J4N37_10215 PF00384 Molybdopterin oxidoreductase J4N37_10220 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N37_10225 PF06796 Periplasmic nitrate reductase protein NapE J4N37_10230 PF03649 Uncharacterised protein family (UPF0014) J4N37_10240 PF01226 Formate/nitrite transporter J4N37_10265 PF02698 DUF218 domain J4N37_10270 PF00265 Thymidine kinase J4N37_10275 PF09190 DALR domain J4N37_10275 PF01406 tRNA synthetases class I (C) catalytic domain J4N37_10280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N37_10285 PF00149 Calcineurin-like phosphoesterase J4N37_10290 PF08668 HDOD domain J4N37_10290 PF00563 EAL domain J4N37_10295 PF02810 SEC-C motif J4N37_10300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4N37_10300 PF01502 Phosphoribosyl-AMP cyclohydrolase J4N37_10305 PF00977 Histidine biosynthesis protein J4N37_10310 PF00977 Histidine biosynthesis protein J4N37_10315 PF00117 Glutamine amidotransferase class-I J4N37_10320 PF08645 Polynucleotide kinase 3 phosphatase J4N37_10320 PF00475 Imidazoleglycerol-phosphate dehydratase J4N37_10325 PF00155 Aminotransferase class I and II J4N37_10330 PF00815 Histidinol dehydrogenase J4N37_10335 PF01634 ATP phosphoribosyltransferase J4N37_10335 PF08029 HisG, C-terminal domain J4N37_10340 PF00072 Response regulator receiver domain J4N37_10340 PF00158 Sigma-54 interaction domain J4N37_10340 PF02954 Bacterial regulatory protein, Fis family J4N37_10345 PF03553 Na+/H+ antiporter family J4N37_10350 PF00816 H-NS histone family J4N37_10355 PF00294 pfkB family carbohydrate kinase J4N37_10370 PF04356 Protein of unknown function (DUF489) J4N37_10375 PF08328 Adenylosuccinate lyase C-terminal J4N37_10375 PF00206 Lyase J4N37_10410 PF00106 short chain dehydrogenase J4N37_10420 PF01435 Peptidase family M48 J4N37_10435 PF08241 Methyltransferase domain J4N37_10440 PF00155 Aminotransferase class I and II J4N37_10445 PF04055 Radical SAM superfamily J4N37_10445 PF06968 Biotin and Thiamin Synthesis associated domain J4N37_10450 PF00202 Aminotransferase class-III J4N37_10455 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N37_10470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N37_10470 PF02403 Seryl-tRNA synthetase N-terminal domain J4N37_10475 PF16193 AAA C-terminal domain J4N37_10475 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_10475 PF12002 MgsA AAA+ ATPase C terminal J4N37_10480 PF03548 Outer membrane lipoprotein carrier protein LolA J4N37_10485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4N37_10485 PF17854 FtsK alpha domain J4N37_10485 PF09397 Ftsk gamma domain J4N37_10485 PF01580 FtsK/SpoIIIE family J4N37_10490 PF01037 Lrp/AsnC ligand binding domain J4N37_10495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N37_10495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N37_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_10505 PF03466 LysR substrate binding domain J4N37_10515 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4N37_10520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_10525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4N37_10530 PF18073 Rubredoxin metal binding domain J4N37_10535 PF06305 Lipopolysaccharide assembly protein A domain J4N37_10540 PF00216 Bacterial DNA-binding protein J4N37_10545 PF00575 S1 RNA binding domain J4N37_10550 PF02224 Cytidylate kinase J4N37_10555 PF08496 Peptidase family S49 N-terminal J4N37_10555 PF01343 Peptidase family S49 J4N37_10560 PF00106 short chain dehydrogenase J4N37_10575 PF01336 OB-fold nucleic acid binding domain J4N37_10575 PF02811 PHP domain J4N37_10575 PF14579 Helix-hairpin-helix motif J4N37_10575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N37_10575 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N37_10580 PF00072 Response regulator receiver domain J4N37_10580 PF01584 CheW-like domain J4N37_10585 PF00480 ROK family J4N37_10590 PF02887 Pyruvate kinase, alpha/beta domain J4N37_10590 PF00224 Pyruvate kinase, barrel domain J4N37_10595 PF01734 Patatin-like phospholipase J4N37_10610 PF00209 Sodium:neurotransmitter symporter family J4N37_10625 PF02378 Phosphotransferase system, EIIC J4N37_10625 PF00367 phosphotransferase system, EIIB J4N37_10630 PF01026 TatD related DNase J4N37_10635 PF09115 DNA polymerase III, delta subunit, C terminal J4N37_10640 PF02223 Thymidylate kinase J4N37_10645 PF02618 YceG-like family J4N37_10650 PF01063 Amino-transferase class IV J4N37_10655 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N37_10655 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N37_10660 PF00550 Phosphopantetheine attachment site J4N37_10670 PF00698 Acyl transferase domain J4N37_10675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N37_10675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N37_10680 PF02504 Fatty acid synthesis protein J4N37_10685 PF01783 Ribosomal L32p protein family J4N37_10690 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4N37_10695 PF02545 Maf-like protein J4N37_10700 PF00849 RNA pseudouridylate synthase J4N37_10700 PF01479 S4 domain J4N37_10710 PF12111 Polyribonucleotide phosphorylase C terminal J4N37_10710 PF00575 S1 RNA binding domain J4N37_10710 PF10150 Ribonuclease E/G family J4N37_10715 PF01740 STAS domain J4N37_10715 PF00916 Sulfate permease family J4N37_10720 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N37_10725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4N37_10725 PF12557 Cob(I)alamin adenosyltransferase N terminal J4N37_10735 PF00485 Phosphoribulokinase / Uridine kinase family J4N37_10740 PF10609 NUBPL iron-transfer P-loop NTPase J4N37_10745 PF09334 tRNA synthetases class I (M) J4N37_10745 PF01588 Putative tRNA binding domain J4N37_10755 PF07840 FadR C-terminal domain J4N37_10755 PF00392 Bacterial regulatory proteins, gntR family J4N37_10760 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J4N37_10765 PF02600 Disulfide bond formation protein DsbB J4N37_10770 PF07516 SecA Wing and Scaffold domain J4N37_10770 PF02810 SEC-C motif J4N37_10770 PF01043 SecA preprotein cross-linking domain J4N37_10770 PF07517 SecA DEAD-like domain J4N37_10775 PF01207 Dihydrouridine synthase (Dus) J4N37_10780 PF05230 MASE2 domain J4N37_10780 PF00990 Diguanylate cyclase, GGDEF domain J4N37_10785 PF00128 Alpha amylase, catalytic domain J4N37_10785 PF02903 Alpha amylase, N-terminal ig-like domain J4N37_10790 PF00005 ABC transporter J4N37_10795 PF02653 Branched-chain amino acid transport system / permease component J4N37_10805 PF04217 Protein of unknown function, DUF412 J4N37_10810 PF00871 Acetokinase family J4N37_10815 PF07085 DRTGG domain J4N37_10815 PF01515 Phosphate acetyl/butaryl transferase J4N37_10820 PF13194 Domain of unknown function (DUF4010) J4N37_10825 PF13409 Glutathione S-transferase, N-terminal domain J4N37_10830 PF00005 ABC transporter J4N37_10830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_10835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_10835 PF00005 ABC transporter J4N37_10840 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_10840 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_10845 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_10850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_10855 PF02391 MoaE protein J4N37_10860 PF02597 ThiS family J4N37_10865 PF01967 MoaC family J4N37_10870 PF00994 Probable molybdopterin binding domain J4N37_10875 PF04055 Radical SAM superfamily J4N37_10875 PF06463 Molybdenum Cofactor Synthesis C J4N37_10880 PF01933 Uncharacterised protein family UPF0052 J4N37_10885 PF01627 Hpt domain J4N37_10890 PF02954 Bacterial regulatory protein, Fis family J4N37_10890 PF00072 Response regulator receiver domain J4N37_10890 PF00158 Sigma-54 interaction domain J4N37_10895 PF04851 Type III restriction enzyme, res subunit J4N37_10895 PF00271 Helicase conserved C-terminal domain J4N37_10895 PF02151 UvrB/uvrC motif J4N37_10895 PF12344 Ultra-violet resistance protein B J4N37_10895 PF17757 UvrB interaction domain J4N37_10905 PF02508 Rnf-Nqr subunit, membrane protein J4N37_10910 PF04060 Putative Fe-S cluster J4N37_10915 PF10531 SLBB domain J4N37_10915 PF13375 RnfC Barrel sandwich hybrid domain J4N37_10915 PF12838 4Fe-4S dicluster domain J4N37_10915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4N37_10920 PF03116 NQR2, RnfD, RnfE family J4N37_10925 PF04205 FMN-binding domain J4N37_10930 PF02508 Rnf-Nqr subunit, membrane protein J4N37_10935 PF10576 Iron-sulfur binding domain of endonuclease III J4N37_10935 PF00633 Helix-hairpin-helix motif J4N37_10935 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N37_10940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_10945 PF10952 Protein of unknown function (DUF2753) J4N37_10950 PF00691 OmpA family J4N37_10950 PF18393 MotY N-terminal domain J4N37_10955 PF00929 Exonuclease J4N37_10960 PF13726 Na+-H+ antiporter family J4N37_10960 PF03553 Na+/H+ antiporter family J4N37_10970 PF00462 Glutaredoxin J4N37_10975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N37_10975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N37_10990 PF00465 Iron-containing alcohol dehydrogenase J4N37_10990 PF00171 Aldehyde dehydrogenase family J4N37_10995 PF01914 MarC family integral membrane protein J4N37_11000 PF00520 Ion transport protein J4N37_11000 PF00027 Cyclic nucleotide-binding domain J4N37_11005 PF07963 Prokaryotic N-terminal methylation motif J4N37_11010 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N37_11010 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N37_11015 PF03553 Na+/H+ antiporter family J4N37_11030 PF04245 37-kD nucleoid-associated bacterial protein J4N37_11035 PF07208 Protein of unknown function (DUF1414) J4N37_11040 PF11893 Domain of unknown function (DUF3413) J4N37_11040 PF00884 Sulfatase J4N37_11060 PF00012 Hsp70 protein J4N37_11065 PF00850 Histone deacetylase domain J4N37_11070 PF00106 short chain dehydrogenase J4N37_11080 PF01131 DNA topoisomerase J4N37_11080 PF01751 Toprim domain J4N37_11085 PF00881 Nitroreductase family J4N37_11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_11090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N37_11095 PF01343 Peptidase family S49 J4N37_11100 PF00710 Asparaginase, N-terminal J4N37_11100 PF17763 Glutaminase/Asparaginase C-terminal domain J4N37_11105 PF07023 Protein of unknown function (DUF1315) J4N37_11115 PF01641 SelR domain J4N37_11120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N37_11120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N37_11125 PF01263 Aldose 1-epimerase J4N37_11135 PF01156 Inosine-uridine preferring nucleoside hydrolase J4N37_11140 PF13426 PAS domain J4N37_11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_11140 PF08447 PAS fold J4N37_11145 PF13847 Methyltransferase domain J4N37_11160 PF00245 Alkaline phosphatase J4N37_11170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_11180 PF00924 Mechanosensitive ion channel J4N37_11180 PF05552 Conserved TM helix J4N37_11185 PF04226 Transglycosylase associated protein J4N37_11190 PF05638 Type VI secretion system effector, Hcp J4N37_11195 PF04717 Type VI secretion system, phage-baseplate injector J4N37_11215 PF13665 Domain of unknown function (DUF4150) J4N37_11215 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 J4N37_11245 PF03692 Putative zinc- or iron-chelating domain J4N37_11250 PF03692 Putative zinc- or iron-chelating domain J4N37_11255 PF13309 HTH domain J4N37_11255 PF08348 YheO-like PAS domain J4N37_11260 PF03313 Serine dehydratase alpha chain J4N37_11265 PF01042 Endoribonuclease L-PSP J4N37_11275 PF00230 Major intrinsic protein J4N37_11280 PF13662 Toprim domain J4N37_11280 PF02132 RecR protein J4N37_11285 PF02575 YbaB/EbfC DNA-binding family J4N37_11290 PF12170 DNA polymerase III tau subunit V interacting with alpha J4N37_11290 PF12169 DNA polymerase III subunits gamma and tau domain III J4N37_11295 PF00156 Phosphoribosyl transferase domain J4N37_11300 PF04304 Protein of unknown function (DUF454) J4N37_11305 PF00072 Response regulator receiver domain J4N37_11310 PF03466 LysR substrate binding domain J4N37_11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_11315 PF00156 Phosphoribosyl transferase domain J4N37_11320 PF02674 Colicin V production protein J4N37_11325 PF05036 Sporulation related domain J4N37_11330 PF08245 Mur ligase middle domain J4N37_11330 PF02875 Mur ligase family, glutamate ligase domain J4N37_11335 PF01039 Carboxyl transferase domain J4N37_11335 PF17848 Acetyl-coA carboxylase zinc finger domain J4N37_11340 PF01416 tRNA pseudouridine synthase J4N37_11350 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N37_11350 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N37_11355 PF11890 Domain of unknown function (DUF3410) J4N37_11355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N37_11355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N37_11360 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N37_11360 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N37_11365 PF01266 FAD dependent oxidoreductase J4N37_11365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4N37_11375 PF08891 YfcL protein J4N37_11380 PF04315 Elongation factor P hydroxylase J4N37_11385 PF03458 UPF0126 domain J4N37_11395 PF03466 LysR substrate binding domain J4N37_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_11400 PF01264 Chorismate synthase J4N37_11405 PF05175 Methyltransferase small domain J4N37_11410 PF01713 Smr domain J4N37_11415 PF00300 Histidine phosphatase superfamily (branch 1) J4N37_11420 PF00675 Insulinase (Peptidase family M16) J4N37_11420 PF05193 Peptidase M16 inactive domain J4N37_11420 PF16187 Middle or third domain of peptidase_M16 J4N37_11430 PF00378 Enoyl-CoA hydratase/isomerase J4N37_11430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N37_11430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N37_11435 PF00108 Thiolase, N-terminal domain J4N37_11435 PF02803 Thiolase, C-terminal domain J4N37_11440 PF04542 Sigma-70 region 2 J4N37_11440 PF08281 Sigma-70, region 4 J4N37_11450 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N37_11455 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N37_11460 PF04333 MlaA lipoprotein J4N37_11470 PF03918 Cytochrome C biogenesis protein J4N37_11475 PF08534 Redoxin J4N37_11480 PF01578 Cytochrome C assembly protein J4N37_11480 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N37_11485 PF03100 CcmE J4N37_11495 PF01578 Cytochrome C assembly protein J4N37_11500 PF03379 CcmB protein J4N37_11505 PF00005 ABC transporter J4N37_11515 PF01584 CheW-like domain J4N37_11525 PF13614 AAA domain J4N37_11530 PF01339 CheB methylesterase J4N37_11530 PF00072 Response regulator receiver domain J4N37_11535 PF00072 Response regulator receiver domain J4N37_11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_11535 PF02895 Signal transducing histidine kinase, homodimeric domain J4N37_11535 PF01627 Hpt domain J4N37_11535 PF01584 CheW-like domain J4N37_11540 PF04344 Chemotaxis phosphatase, CheZ J4N37_11545 PF00072 Response regulator receiver domain J4N37_11550 PF04542 Sigma-70 region 2 J4N37_11550 PF04539 Sigma-70 region 3 J4N37_11550 PF04545 Sigma-70, region 4 J4N37_11555 PF10609 NUBPL iron-transfer P-loop NTPase J4N37_11560 PF00448 SRP54-type protein, GTPase domain J4N37_11565 PF00771 FHIPEP family J4N37_11570 PF01312 FlhB HrpN YscU SpaS Family J4N37_11575 PF01311 Bacterial export proteins, family 1 J4N37_11580 PF01313 Bacterial export proteins, family 3 J4N37_11585 PF00813 FliP family J4N37_11590 PF04347 Flagellar biosynthesis protein, FliO J4N37_11595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N37_11600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N37_11600 PF02154 Flagellar motor switch protein FliM J4N37_11605 PF03748 Flagellar basal body-associated protein FliL J4N37_11620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N37_11620 PF18269 T3SS EscN ATPase C-terminal domain J4N37_11630 PF01706 FliG C-terminal domain J4N37_11630 PF14841 FliG middle domain J4N37_11630 PF14842 FliG N-terminal domain J4N37_11635 PF01514 Secretory protein of YscJ/FliF family J4N37_11635 PF08345 Flagellar M-ring protein C-terminal J4N37_11640 PF02049 Flagellar hook-basal body complex protein FliE J4N37_11645 PF00158 Sigma-54 interaction domain J4N37_11645 PF02954 Bacterial regulatory protein, Fis family J4N37_11645 PF00072 Response regulator receiver domain J4N37_11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_11650 PF00512 His Kinase A (phospho-acceptor) domain J4N37_11650 PF13188 PAS domain J4N37_11655 PF06490 Flagellar regulatory protein FleQ J4N37_11655 PF02954 Bacterial regulatory protein, Fis family J4N37_11655 PF00158 Sigma-54 interaction domain J4N37_11660 PF02561 Flagellar protein FliS J4N37_11670 PF07196 Flagellin hook IN motif J4N37_11670 PF07195 Flagellar hook-associated protein 2 C-terminus J4N37_11670 PF02465 Flagellar hook-associated protein 2 N-terminus J4N37_11675 PF03646 FlaG protein J4N37_11680 PF00669 Bacterial flagellin N-terminal helical region J4N37_11680 PF00700 Bacterial flagellin C-terminal helical region J4N37_11680 PF07196 Flagellin hook IN motif J4N37_11685 PF07196 Flagellin hook IN motif J4N37_11685 PF00700 Bacterial flagellin C-terminal helical region J4N37_11685 PF00669 Bacterial flagellin N-terminal helical region J4N37_11690 PF00700 Bacterial flagellin C-terminal helical region J4N37_11690 PF07196 Flagellin hook IN motif J4N37_11690 PF00669 Bacterial flagellin N-terminal helical region J4N37_11700 PF02056 Family 4 glycosyl hydrolase J4N37_11700 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N37_11705 PF12833 Helix-turn-helix domain J4N37_11710 PF04261 Dyp-type peroxidase family J4N37_11715 PF11143 Protein of unknown function (DUF2919) J4N37_11735 PF03960 ArsC family J4N37_11740 PF01546 Peptidase family M20/M25/M40 J4N37_11740 PF07687 Peptidase dimerisation domain J4N37_11755 PF06804 NlpB/DapX lipoprotein J4N37_11760 PF00701 Dihydrodipicolinate synthetase family J4N37_11765 PF01842 ACT domain J4N37_11770 PF00578 AhpC/TSA family J4N37_11775 PF01594 AI-2E family transporter J4N37_11785 PF01435 Peptidase family M48 J4N37_11785 PF13181 Tetratricopeptide repeat J4N37_11790 PF03960 ArsC family J4N37_11795 PF03358 NADPH-dependent FMN reductase J4N37_11810 PF00860 Permease family J4N37_11820 PF00586 AIR synthase related protein, N-terminal domain J4N37_11820 PF02769 AIR synthase related protein, C-terminal domain J4N37_11825 PF00551 Formyl transferase J4N37_11830 PF13230 Glutamine amidotransferases class-II J4N37_11835 PF13580 SIS domain J4N37_11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N37_11840 PF02770 Acyl-CoA dehydrogenase, middle domain J4N37_11840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N37_11840 PF09317 Domain of unknown function (DUF1974) J4N37_11855 PF00929 Exonuclease J4N37_11860 PF00075 RNase H J4N37_11865 PF08241 Methyltransferase domain J4N37_11870 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4N37_11870 PF00753 Metallo-beta-lactamase superfamily J4N37_11875 PF01476 LysM domain J4N37_11875 PF01464 Transglycosylase SLT domain J4N37_11890 PF00543 Nitrogen regulatory protein P-II J4N37_11895 PF00034 Cytochrome c J4N37_11900 PF01171 PP-loop family J4N37_11900 PF09179 TilS substrate binding domain J4N37_11900 PF11734 TilS substrate C-terminal domain J4N37_11905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4N37_11910 PF02811 PHP domain J4N37_11910 PF01336 OB-fold nucleic acid binding domain J4N37_11910 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N37_11910 PF14579 Helix-hairpin-helix motif J4N37_11910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N37_11915 PF01351 Ribonuclease HII J4N37_11920 PF02684 Lipid-A-disaccharide synthetase J4N37_11925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4N37_11925 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_11930 PF07977 FabA-like domain J4N37_11935 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_11935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4N37_11940 PF03938 Outer membrane protein (OmpH-like) J4N37_11945 PF07244 Surface antigen variable number repeat J4N37_11945 PF01103 Surface antigen J4N37_11950 PF17820 PDZ domain J4N37_11950 PF02163 Peptidase family M50 J4N37_11955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4N37_11955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4N37_11955 PF13288 DXP reductoisomerase C-terminal domain J4N37_11965 PF01255 Putative undecaprenyl diphosphate synthase J4N37_11970 PF01765 Ribosome recycling factor J4N37_11975 PF00696 Amino acid kinase family J4N37_11980 PF00889 Elongation factor TS J4N37_11985 PF00318 Ribosomal protein S2 J4N37_11990 PF00557 Metallopeptidase family M24 J4N37_11995 PF08335 GlnD PII-uridylyltransferase J4N37_11995 PF01842 ACT domain J4N37_11995 PF01909 Nucleotidyltransferase domain J4N37_11995 PF01966 HD domain J4N37_12000 PF11944 Protein of unknown function (DUF3461) J4N37_12005 PF00849 RNA pseudouridylate synthase J4N37_12010 PF04287 tRNA pseudouridine synthase C J4N37_12035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4N37_12045 PF03806 AbgT putative transporter family J4N37_12050 PF00444 Ribosomal protein L36 J4N37_12055 PF01197 Ribosomal protein L31 J4N37_12060 PF01980 tRNA-methyltransferase O J4N37_12060 PF18389 TrmO C-terminal domain J4N37_12065 PF04073 Aminoacyl-tRNA editing domain J4N37_12065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N37_12065 PF03129 Anticodon binding domain J4N37_12075 PF06786 Uncharacterised protein family (UPF0253) J4N37_12085 PF00209 Sodium:neurotransmitter symporter family J4N37_12095 PF03449 Transcription elongation factor, N-terminal J4N37_12095 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N37_12100 PF00270 DEAD/DEAH box helicase J4N37_12100 PF00570 HRDC domain J4N37_12100 PF16124 RecQ zinc-binding J4N37_12100 PF09382 RQC domain J4N37_12100 PF00271 Helicase conserved C-terminal domain J4N37_12105 PF00817 impB/mucB/samB family J4N37_12105 PF11799 impB/mucB/samB family C-terminal domain J4N37_12105 PF11798 IMS family HHH motif J4N37_12110 PF00990 Diguanylate cyclase, GGDEF domain J4N37_12110 PF00072 Response regulator receiver domain J4N37_12120 PF02424 ApbE family J4N37_12125 PF00175 Oxidoreductase NAD-binding domain J4N37_12125 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_12125 PF00970 Oxidoreductase FAD-binding domain J4N37_12130 PF02508 Rnf-Nqr subunit, membrane protein J4N37_12135 PF02508 Rnf-Nqr subunit, membrane protein J4N37_12140 PF04205 FMN-binding domain J4N37_12145 PF03116 NQR2, RnfD, RnfE family J4N37_12150 PF11973 NQRA C-terminal domain J4N37_12150 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J4N37_12155 PF01722 BolA-like protein J4N37_12160 PF05175 Methyltransferase small domain J4N37_12170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N37_12175 PF07690 Major Facilitator Superfamily J4N37_12185 PF04542 Sigma-70 region 2 J4N37_12185 PF04545 Sigma-70, region 4 J4N37_12200 PF03502 Nucleoside-specific channel-forming protein, Tsx J4N37_12205 PF02558 Ketopantoate reductase PanE/ApbA J4N37_12205 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4N37_12210 PF01965 DJ-1/PfpI family J4N37_12215 PF00266 Aminotransferase class-V J4N37_12220 PF02657 Fe-S metabolism associated domain J4N37_12225 PF00899 ThiF family J4N37_12230 PF06725 3D domain J4N37_12230 PF03562 MltA specific insert domain J4N37_12240 PF00583 Acetyltransferase (GNAT) family J4N37_12240 PF00696 Amino acid kinase family J4N37_12255 PF13538 UvrD-like helicase C-terminal domain J4N37_12260 PF00580 UvrD/REP helicase N-terminal domain J4N37_12260 PF13361 UvrD-like helicase C-terminal domain J4N37_12260 PF12705 PD-(D/E)XK nuclease superfamily J4N37_12265 PF17946 RecC C-terminal domain J4N37_12270 PF11893 Domain of unknown function (DUF3413) J4N37_12270 PF00884 Sulfatase J4N37_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_12280 PF03466 LysR substrate binding domain J4N37_12285 PF07130 YebG protein J4N37_12300 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_12300 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle J4N37_12305 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N37_12310 PF07690 Major Facilitator Superfamily J4N37_12315 PF00230 Major intrinsic protein J4N37_12320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4N37_12320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4N37_12325 PF00455 DeoR C terminal sensor domain J4N37_12325 PF08220 DeoR-like helix-turn-helix domain J4N37_12330 PF01266 FAD dependent oxidoreductase J4N37_12330 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N37_12335 PF13322 Domain of unknown function (DUF4092) J4N37_12335 PF17291 N-terminal domain of M60-like peptidases J4N37_12335 PF13402 Peptidase M60, enhancin and enhancin-like J4N37_12340 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N37_12340 PF01464 Transglycosylase SLT domain J4N37_12360 PF01588 Putative tRNA binding domain J4N37_12365 PF00356 Bacterial regulatory proteins, lacI family J4N37_12370 PF01263 Aldose 1-epimerase J4N37_12375 PF10509 Galactokinase galactose-binding signature J4N37_12375 PF08544 GHMP kinases C terminal J4N37_12375 PF00288 GHMP kinases N terminal domain J4N37_12380 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4N37_12380 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4N37_12385 PF16363 GDP-mannose 4,6 dehydratase J4N37_12390 PF00905 Penicillin binding protein transpeptidase domain J4N37_12390 PF03717 Penicillin-binding Protein dimerisation domain J4N37_12395 PF00356 Bacterial regulatory proteins, lacI family J4N37_12400 PF16353 Domain of unknown function(DUF4981) J4N37_12400 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4N37_12400 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4N37_12400 PF02929 Beta galactosidase small chain J4N37_12400 PF00703 Glycosyl hydrolases family 2 J4N37_12405 PF04074 YhcH/YjgK/YiaL J4N37_12410 PF13520 Amino acid permease J4N37_12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_12415 PF03466 LysR substrate binding domain J4N37_12445 PF00437 Type II/IV secretion system protein J4N37_12475 PF04972 BON domain J4N37_12475 PF00263 Bacterial type II and III secretion system protein J4N37_12475 PF13629 Pilus formation protein N terminal region J4N37_12500 PF12833 Helix-turn-helix domain J4N37_12500 PF02805 Metal binding domain of Ada J4N37_12505 PF00501 AMP-binding enzyme J4N37_12515 PF03466 LysR substrate binding domain J4N37_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_12520 PF03144 Elongation factor Tu domain 2 J4N37_12520 PF00009 Elongation factor Tu GTP binding domain J4N37_12520 PF03764 Elongation factor G, domain IV J4N37_12520 PF14492 Elongation Factor G, domain II J4N37_12520 PF00679 Elongation factor G C-terminus J4N37_12525 PF18073 Rubredoxin metal binding domain J4N37_12535 PF18429 Domain of unknown function (DUF5609) J4N37_12545 PF01048 Phosphorylase superfamily J4N37_12550 PF01676 Metalloenzyme superfamily J4N37_12555 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4N37_12555 PF00591 Glycosyl transferase family, a/b domain J4N37_12555 PF02885 Glycosyl transferase family, helical bundle domain J4N37_12560 PF01791 DeoC/LacD family aldolase J4N37_12565 PF01773 Na+ dependent nucleoside transporter N-terminus J4N37_12565 PF07662 Na+ dependent nucleoside transporter C-terminus J4N37_12565 PF07670 Nucleoside recognition J4N37_12570 PF01026 TatD related DNase J4N37_12580 PF16658 Class II release factor RF3, C-terminal domain J4N37_12580 PF00009 Elongation factor Tu GTP binding domain J4N37_12580 PF03144 Elongation factor Tu domain 2 J4N37_12585 PF00990 Diguanylate cyclase, GGDEF domain J4N37_12585 PF05230 MASE2 domain J4N37_12605 PF13508 Acetyltransferase (GNAT) domain J4N37_12610 PF02036 SCP-2 sterol transfer family J4N37_12615 PF00990 Diguanylate cyclase, GGDEF domain J4N37_12615 PF00563 EAL domain J4N37_12615 PF03707 Bacterial signalling protein N terminal repeat J4N37_12620 PF01136 Peptidase family U32 J4N37_12625 PF01136 Peptidase family U32 J4N37_12630 PF01554 MatE J4N37_12640 PF07719 Tetratricopeptide repeat J4N37_12640 PF13181 Tetratricopeptide repeat J4N37_12645 PF00013 KH domain J4N37_12645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4N37_12645 PF01138 3' exoribonuclease family, domain 1 J4N37_12645 PF03725 3' exoribonuclease family, domain 2 J4N37_12645 PF00575 S1 RNA binding domain J4N37_12650 PF00312 Ribosomal protein S15 J4N37_12655 PF09157 Pseudouridine synthase II TruB, C-terminal J4N37_12655 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4N37_12655 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4N37_12660 PF02033 Ribosome-binding factor A J4N37_12665 PF00009 Elongation factor Tu GTP binding domain J4N37_12665 PF04760 Translation initiation factor IF-2, N-terminal region J4N37_12665 PF08364 Bacterial translation initiation factor IF-2 associated region J4N37_12665 PF11987 Translation-initiation factor 2 J4N37_12670 PF00575 S1 RNA binding domain J4N37_12670 PF08529 NusA N-terminal domain J4N37_12670 PF13184 NusA-like KH domain J4N37_12675 PF17384 RimP C-terminal SH3 domain J4N37_12675 PF02576 RimP N-terminal domain J4N37_12690 PF03840 Preprotein translocase SecG subunit J4N37_12695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N37_12695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N37_12695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N37_12695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N37_12700 PF00809 Pterin binding enzyme J4N37_12705 PF01434 Peptidase family M41 J4N37_12705 PF06480 FtsH Extracellular J4N37_12705 PF17862 AAA+ lid domain J4N37_12705 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_12710 PF01728 FtsJ-like methyltransferase J4N37_12715 PF01985 CRS1 / YhbY (CRM) domain J4N37_12720 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N37_12720 PF03449 Transcription elongation factor, N-terminal J4N37_12725 PF13609 Gram-negative porin J4N37_12730 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4N37_12745 PF00579 tRNA synthetases class I (W and Y) J4N37_12750 PF01551 Peptidase family M23 J4N37_12750 PF08525 Opacity-associated protein A N-terminal motif J4N37_12750 PF01476 LysM domain J4N37_12755 PF00873 AcrB/AcrD/AcrF family J4N37_12760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_12765 PF01521 Iron-sulphur cluster biosynthesis J4N37_12770 PF00202 Aminotransferase class-III J4N37_12775 PF01594 AI-2E family transporter J4N37_12780 PF05175 Methyltransferase small domain J4N37_12780 PF08468 Methyltransferase small domain N-terminal J4N37_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_12785 PF00512 His Kinase A (phospho-acceptor) domain J4N37_12785 PF00072 Response regulator receiver domain J4N37_12785 PF09308 LuxQ, periplasmic J4N37_12790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_12795 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_12800 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_12800 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_12805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_12805 PF00005 ABC transporter J4N37_12810 PF00005 ABC transporter J4N37_12810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_12820 PF01869 BadF/BadG/BcrA/BcrD ATPase family J4N37_12825 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N37_12825 PF02838 Glycosyl hydrolase family 20, domain 2 J4N37_12830 PF06165 Glycosyltransferase family 36 J4N37_12830 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J4N37_12835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N37_12835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N37_12835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N37_12835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N37_12840 PF08402 TOBE domain J4N37_12840 PF00005 ABC transporter J4N37_12850 PF13416 Bacterial extracellular solute-binding protein J4N37_12855 PF00909 Ammonium Transporter Family J4N37_12860 PF00543 Nitrogen regulatory protein P-II J4N37_12865 PF06062 Uncharacterised protein family (UPF0231) J4N37_12870 PF11791 Aconitate B N-terminal domain J4N37_12870 PF06434 Aconitate hydratase 2 N-terminus J4N37_12870 PF00330 Aconitase family (aconitate hydratase) J4N37_12875 PF01734 Patatin-like phospholipase J4N37_12880 PF00912 Transglycosylase J4N37_12880 PF00905 Penicillin binding protein transpeptidase domain J4N37_12880 PF14814 Bifunctional transglycosylase second domain J4N37_12885 PF08482 ATP-dependent helicase C-terminal J4N37_12885 PF00270 DEAD/DEAH box helicase J4N37_12885 PF04408 Helicase associated domain (HA2) J4N37_12885 PF00271 Helicase conserved C-terminal domain J4N37_12890 PF17746 SfsA N-terminal OB domain J4N37_12890 PF03749 Sugar fermentation stimulation protein RE domain J4N37_12895 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N37_12900 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N37_12905 PF12626 Polymerase A arginine-rich C-terminus J4N37_12905 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N37_12905 PF01743 Poly A polymerase head domain J4N37_12910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N37_12915 PF02548 Ketopantoate hydroxymethyltransferase J4N37_12920 PF02569 Pantoate-beta-alanine ligase J4N37_12925 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N37_12930 PF01061 ABC-2 type transporter J4N37_12935 PF00005 ABC transporter J4N37_12940 PF01740 STAS domain J4N37_12940 PF00916 Sulfate permease family J4N37_12945 PF00484 Carbonic anhydrase J4N37_12950 PF00156 Phosphoribosyl transferase domain J4N37_12955 PF00440 Bacterial regulatory proteins, tetR family J4N37_12960 PF02371 Transposase IS116/IS110/IS902 family J4N37_12960 PF01548 Transposase J4N37_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_12965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N37_12970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N37_12970 PF02817 e3 binding domain J4N37_12970 PF00364 Biotin-requiring enzyme J4N37_12975 PF00456 Transketolase, thiamine diphosphate binding domain J4N37_12975 PF17831 Pyruvate dehydrogenase E1 component middle domain J4N37_12980 PF00392 Bacterial regulatory proteins, gntR family J4N37_12980 PF07729 FCD domain J4N37_12985 PF01510 N-acetylmuramoyl-L-alanine amidase J4N37_12990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4N37_12990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4N37_12995 PF07963 Prokaryotic N-terminal methylation motif J4N37_13000 PF00437 Type II/IV secretion system protein J4N37_13000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N37_13005 PF00482 Type II secretion system (T2SS), protein F J4N37_13010 PF06750 Bacterial Peptidase A24 N-terminal domain J4N37_13010 PF01478 Type IV leader peptidase family J4N37_13015 PF01121 Dephospho-CoA kinase J4N37_13020 PF07072 Cell division protein J4N37_13025 PF03884 DNA gyrase inhibitor YacG J4N37_13030 PF01245 Ribosomal protein L19 J4N37_13035 PF01746 tRNA (Guanine-1)-methyltransferase J4N37_13040 PF05239 PRC-barrel domain J4N37_13040 PF01782 RimM N-terminal domain J4N37_13045 PF00886 Ribosomal protein S16 J4N37_13050 PF00448 SRP54-type protein, GTPase domain J4N37_13050 PF02881 SRP54-type protein, helical bundle domain J4N37_13050 PF02978 Signal peptide binding domain J4N37_13055 PF01578 Cytochrome C assembly protein J4N37_13060 PF03471 Transporter associated domain J4N37_13060 PF00571 CBS domain J4N37_13060 PF01595 Cyclin M transmembrane N-terminal domain J4N37_13065 PF02664 S-Ribosylhomocysteinase (LuxS) J4N37_13075 PF04262 Glutamate-cysteine ligase J4N37_13080 PF00675 Insulinase (Peptidase family M16) J4N37_13080 PF05193 Peptidase M16 inactive domain J4N37_13085 PF09335 SNARE associated Golgi protein J4N37_13090 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_13090 PF00107 Zinc-binding dehydrogenase J4N37_13095 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4N37_13100 PF00364 Biotin-requiring enzyme J4N37_13100 PF00682 HMGL-like J4N37_13100 PF02436 Conserved carboxylase domain J4N37_13105 PF04277 Oxaloacetate decarboxylase, gamma chain J4N37_13165 PF02599 Global regulator protein family J4N37_13170 PF00696 Amino acid kinase family J4N37_13170 PF13840 ACT domain J4N37_13170 PF01842 ACT domain J4N37_13175 PF01411 tRNA synthetases class II (A) J4N37_13175 PF02272 DHHA1 domain J4N37_13175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N37_13180 PF02631 RecX family J4N37_13185 PF00154 recA bacterial DNA recombination protein J4N37_13190 PF02464 Competence-damaged protein J4N37_13195 PF01624 MutS domain I J4N37_13195 PF05188 MutS domain II J4N37_13195 PF05190 MutS family domain IV J4N37_13195 PF00488 MutS domain V J4N37_13195 PF05192 MutS domain III J4N37_13200 PF00140 Sigma-70 factor, region 1.2 J4N37_13200 PF04545 Sigma-70, region 4 J4N37_13200 PF04539 Sigma-70 region 3 J4N37_13200 PF04542 Sigma-70 region 2 J4N37_13205 PF01476 LysM domain J4N37_13205 PF01551 Peptidase family M23 J4N37_13215 PF01975 Survival protein SurE J4N37_13220 PF01142 tRNA pseudouridine synthase D (TruD) J4N37_13225 PF02542 YgbB family J4N37_13230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4N37_13235 PF04977 Septum formation initiator J4N37_13240 PF03952 Enolase, N-terminal domain J4N37_13240 PF00113 Enolase, C-terminal TIM barrel domain J4N37_13245 PF00117 Glutamine amidotransferase class-I J4N37_13245 PF06418 CTP synthase N-terminus J4N37_13250 PF03819 MazG nucleotide pyrophosphohydrolase domain J4N37_13255 PF13291 ACT domain J4N37_13255 PF02824 TGS domain J4N37_13255 PF04607 Region found in RelA / SpoT proteins J4N37_13260 PF01938 TRAM domain J4N37_13260 PF05958 tRNA (Uracil-5-)-methyltransferase J4N37_13265 PF00672 HAMP domain J4N37_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_13265 PF00512 His Kinase A (phospho-acceptor) domain J4N37_13265 PF01627 Hpt domain J4N37_13265 PF00072 Response regulator receiver domain J4N37_13265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N37_13270 PF01648 4'-phosphopantetheinyl transferase superfamily J4N37_13275 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4N37_13280 PF11967 Recombination protein O N terminal J4N37_13280 PF02565 Recombination protein O C terminal J4N37_13285 PF07650 KH domain J4N37_13285 PF01926 50S ribosome-binding GTPase J4N37_13290 PF00035 Double-stranded RNA binding motif J4N37_13290 PF14622 Ribonuclease-III-like J4N37_13295 PF10502 Signal peptidase, peptidase S26 J4N37_13300 PF06421 GTP-binding protein LepA C-terminus J4N37_13300 PF03144 Elongation factor Tu domain 2 J4N37_13300 PF00009 Elongation factor Tu GTP binding domain J4N37_13300 PF00679 Elongation factor G C-terminus J4N37_13310 PF03888 MucB/RseB N-terminal domain J4N37_13310 PF17188 MucB/RseB C-terminal domain J4N37_13315 PF03872 Anti sigma-E protein RseA, N-terminal domain J4N37_13315 PF03873 Anti sigma-E protein RseA, C-terminal domain J4N37_13320 PF04542 Sigma-70 region 2 J4N37_13320 PF08281 Sigma-70, region 4 J4N37_13325 PF00890 FAD binding domain J4N37_13325 PF02910 Fumarate reductase flavoprotein C-term J4N37_13330 PF03937 Flavinator of succinate dehydrogenase J4N37_13350 PF01494 FAD binding domain J4N37_13355 PF01494 FAD binding domain J4N37_13360 PF03695 Uncharacterised protein family (UPF0149) J4N37_13365 PF05164 Cell division protein ZapA J4N37_13375 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4N37_13380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4N37_13385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N37_13385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N37_13385 PF01842 ACT domain J4N37_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_13395 PF03466 LysR substrate binding domain J4N37_13400 PF01810 LysE type translocator J4N37_13410 PF00924 Mechanosensitive ion channel J4N37_13410 PF05552 Conserved TM helix J4N37_13415 PF01116 Fructose-bisphosphate aldolase class-II J4N37_13420 PF00162 Phosphoglycerate kinase J4N37_13425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N37_13425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N37_13435 PF00456 Transketolase, thiamine diphosphate binding domain J4N37_13435 PF02779 Transketolase, pyrimidine binding domain J4N37_13435 PF02780 Transketolase, C-terminal domain J4N37_13440 PF02772 S-adenosylmethionine synthetase, central domain J4N37_13440 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4N37_13440 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4N37_13450 PF10263 SprT-like family J4N37_13450 PF17283 SprT-like zinc ribbon domain J4N37_13455 PF04231 Endonuclease I J4N37_13460 PF04452 RNA methyltransferase J4N37_13465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4N37_13465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4N37_13470 PF02622 Uncharacterized ACR, COG1678 J4N37_13475 PF03652 Holliday junction resolvase J4N37_13480 PF00437 Type II/IV secretion system protein J4N37_13485 PF00437 Type II/IV secretion system protein J4N37_13490 PF01168 Alanine racemase, N-terminal domain J4N37_13495 PF03807 NADP oxidoreductase coenzyme F420-dependent J4N37_13495 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4N37_13500 PF02325 YGGT family J4N37_13505 PF02594 Uncharacterised ACR, YggU family COG1872 J4N37_13515 PF01725 Ham1 family J4N37_13520 PF06969 HemN C-terminal domain J4N37_13520 PF04055 Radical SAM superfamily J4N37_13525 PF04960 Glutaminase J4N37_13530 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N37_13535 PF02390 Putative methyltransferase J4N37_13540 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N37_13540 PF14815 NUDIX domain J4N37_13540 PF00633 Helix-hairpin-helix motif J4N37_13545 PF04362 Bacterial Fe(2+) trafficking J4N37_13550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N37_13550 PF01464 Transglycosylase SLT domain J4N37_13590 PF00672 HAMP domain J4N37_13590 PF17200 Single Cache domain 2 J4N37_13590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_13620 PF00171 Aldehyde dehydrogenase family J4N37_13660 PF00356 Bacterial regulatory proteins, lacI family J4N37_13665 PF04794 YdjC-like protein J4N37_13670 PF02056 Family 4 glycosyl hydrolase J4N37_13670 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N37_13675 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4N37_13680 PF02378 Phosphotransferase system, EIIC J4N37_13685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N37_13700 PF00106 short chain dehydrogenase J4N37_13710 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N37_13715 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N37_13720 PF00883 Cytosol aminopeptidase family, catalytic domain J4N37_13720 PF02789 Cytosol aminopeptidase family, N-terminal domain J4N37_13725 PF04364 DNA polymerase III chi subunit, HolC J4N37_13730 PF10458 Valyl tRNA synthetase tRNA binding arm J4N37_13730 PF00133 tRNA synthetases class I (I, L, M and V) J4N37_13730 PF08264 Anticodon-binding domain of tRNA J4N37_13740 PF00583 Acetyltransferase (GNAT) family J4N37_13750 PF06877 Regulator of ribonuclease activity B J4N37_13760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N37_13760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N37_13770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N37_13770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N37_13775 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N37_13775 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N37_13780 PF01042 Endoribonuclease L-PSP J4N37_13785 PF01553 Acyltransferase J4N37_13790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N37_13795 PF01722 BolA-like protein J4N37_13805 PF05494 MlaC protein J4N37_13810 PF02470 MlaD protein J4N37_13815 PF02405 Permease MlaE J4N37_13820 PF00005 ABC transporter J4N37_13825 PF01699 Sodium/calcium exchanger protein J4N37_13830 PF00571 CBS domain J4N37_13830 PF01380 SIS domain J4N37_13840 PF03968 OstA-like protein J4N37_13845 PF00005 ABC transporter J4N37_13845 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4N37_13850 PF04552 Sigma-54, DNA binding domain J4N37_13850 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4N37_13850 PF04963 Sigma-54 factor, core binding domain J4N37_13855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N37_13860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N37_13865 PF03668 P-loop ATPase protein family J4N37_13870 PF00381 PTS HPr component phosphorylation site J4N37_13875 PF00571 CBS domain J4N37_13875 PF01769 Divalent cation transporter J4N37_13875 PF03448 MgtE intracellular N domain J4N37_13880 PF01523 Putative modulator of DNA gyrase J4N37_13885 PF04751 Protein of unknown function (DUF615) J4N37_13890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N37_13890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N37_13895 PF00849 RNA pseudouridylate synthase J4N37_13905 PF12137 RNA polymerase recycling family C-terminal J4N37_13905 PF00176 SNF2 family N-terminal domain J4N37_13905 PF18339 RapA N-terminal Tudor like domain 1 J4N37_13905 PF18337 RapA N-terminal Tudor like domain J4N37_13905 PF00271 Helicase conserved C-terminal domain J4N37_13910 PF02562 PhoH-like protein J4N37_13910 PF13638 PIN domain J4N37_13915 PF01523 Putative modulator of DNA gyrase J4N37_13920 PF00795 Carbon-nitrogen hydrolase J4N37_13925 PF13116 Protein of unknown function J4N37_13925 PF13502 AsmA-like C-terminal region J4N37_13930 PF10150 Ribonuclease E/G family J4N37_13930 PF00575 S1 RNA binding domain J4N37_13935 PF02545 Maf-like protein J4N37_13940 PF04093 rod shape-determining protein MreD J4N37_13945 PF04085 rod shape-determining protein MreC J4N37_13985 PF07963 Prokaryotic N-terminal methylation motif J4N37_13995 PF00482 Type II secretion system (T2SS), protein F J4N37_14000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N37_14000 PF00437 Type II/IV secretion system protein J4N37_14010 PF01471 Putative peptidoglycan binding domain J4N37_14010 PF13401 AAA domain J4N37_14015 PF00263 Bacterial type II and III secretion system protein J4N37_14015 PF03958 Bacterial type II/III secretion system short domain J4N37_14035 PF00990 Diguanylate cyclase, GGDEF domain J4N37_14035 PF17157 Gammaproteobacterial periplasmic sensor domain J4N37_14035 PF00563 EAL domain J4N37_14040 PF00436 Single-strand binding protein family J4N37_14045 PF00196 Bacterial regulatory proteins, luxR family J4N37_14050 PF00483 Nucleotidyl transferase J4N37_14055 PF17755 UvrA DNA-binding domain J4N37_14055 PF00005 ABC transporter J4N37_14055 PF17760 UvrA interaction domain J4N37_14065 PF00266 Aminotransferase class-V J4N37_14070 PF00696 Amino acid kinase family J4N37_14070 PF01842 ACT domain J4N37_14075 PF02310 B12 binding domain J4N37_14075 PF02607 B12 binding domain J4N37_14075 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N37_14075 PF02574 Homocysteine S-methyltransferase J4N37_14075 PF00809 Pterin binding enzyme J4N37_14080 PF00999 Sodium/hydrogen exchanger family J4N37_14135 PF01507 Phosphoadenosine phosphosulfate reductase family J4N37_14140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N37_14140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N37_14145 PF00667 FAD binding domain J4N37_14145 PF00258 Flavodoxin J4N37_14145 PF00175 Oxidoreductase NAD-binding domain J4N37_14165 PF01207 Dihydrouridine synthase (Dus) J4N37_14170 PF01475 Ferric uptake regulator family J4N37_14180 PF00342 Phosphoglucose isomerase J4N37_14185 PF01894 Uncharacterised protein family UPF0047 J4N37_14195 PF00842 Alanine racemase, C-terminal domain J4N37_14195 PF01168 Alanine racemase, N-terminal domain J4N37_14200 PF03796 DnaB-like helicase C terminal domain J4N37_14200 PF00772 DnaB-like helicase N terminal domain J4N37_14210 PF03948 Ribosomal protein L9, C-terminal domain J4N37_14210 PF01281 Ribosomal protein L9, N-terminal domain J4N37_14215 PF01084 Ribosomal protein S18 J4N37_14220 PF00436 Single-strand binding protein family J4N37_14225 PF01250 Ribosomal protein S6 J4N37_14230 PF00834 Ribulose-phosphate 3 epimerase family J4N37_14235 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N37_14245 PF01761 3-dehydroquinate synthase J4N37_14250 PF01202 Shikimate kinase J4N37_14255 PF03958 Bacterial type II/III secretion system short domain J4N37_14255 PF07660 Secretin and TonB N terminus short domain J4N37_14255 PF11741 AMIN domain J4N37_14255 PF00263 Bacterial type II and III secretion system protein J4N37_14280 PF17092 Penicillin-binding protein OB-like domain J4N37_14280 PF00912 Transglycosylase J4N37_14280 PF00905 Penicillin binding protein transpeptidase domain J4N37_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_14285 PF03466 LysR substrate binding domain J4N37_14290 PF00462 Glutaredoxin J4N37_14290 PF08534 Redoxin J4N37_14300 PF14698 Argininosuccinate lyase C-terminal J4N37_14300 PF00583 Acetyltransferase (GNAT) family J4N37_14300 PF00206 Lyase J4N37_14305 PF00764 Arginosuccinate synthase J4N37_14310 PF00696 Amino acid kinase family J4N37_14315 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N37_14315 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N37_14320 PF01546 Peptidase family M20/M25/M40 J4N37_14320 PF07687 Peptidase dimerisation domain J4N37_14325 PF00311 Phosphoenolpyruvate carboxylase J4N37_14335 PF02219 Methylenetetrahydrofolate reductase J4N37_14340 PF00696 Amino acid kinase family J4N37_14340 PF00742 Homoserine dehydrogenase J4N37_14340 PF03447 Homoserine dehydrogenase, NAD binding domain J4N37_14345 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N37_14350 PF01340 Met Apo-repressor, MetJ J4N37_14355 PF03949 Malic enzyme, NAD binding domain J4N37_14355 PF00390 Malic enzyme, N-terminal domain J4N37_14360 PF00210 Ferritin-like domain J4N37_14365 PF04324 BFD-like [2Fe-2S] binding domain J4N37_14375 PF00009 Elongation factor Tu GTP binding domain J4N37_14375 PF03144 Elongation factor Tu domain 2 J4N37_14375 PF14492 Elongation Factor G, domain II J4N37_14375 PF03764 Elongation factor G, domain IV J4N37_14375 PF00679 Elongation factor G C-terminus J4N37_14380 PF00177 Ribosomal protein S7p/S5e J4N37_14385 PF00164 Ribosomal protein S12/S23 J4N37_14390 PF04077 DsrH like protein J4N37_14395 PF02635 DsrE/DsrF-like family J4N37_14400 PF02635 DsrE/DsrF-like family J4N37_14405 PF13309 HTH domain J4N37_14405 PF08348 YheO-like PAS domain J4N37_14410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_14410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N37_14420 PF04102 SlyX J4N37_14425 PF01112 Asparaginase J4N37_14430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_14440 PF00999 Sodium/hydrogen exchanger family J4N37_14440 PF02254 TrkA-N domain J4N37_14445 PF02525 Flavodoxin-like fold J4N37_14450 PF00005 ABC transporter J4N37_14450 PF12848 ABC transporter J4N37_14460 PF00561 alpha/beta hydrolase fold J4N37_14465 PF06794 Uncharacterised protein family (UPF0270) J4N37_14470 PF00485 Phosphoribulokinase / Uridine kinase family J4N37_14475 PF00027 Cyclic nucleotide-binding domain J4N37_14475 PF13545 Crp-like helix-turn-helix domain J4N37_14485 PF00171 Aldehyde dehydrogenase family J4N37_14490 PF04958 Arginine N-succinyltransferase beta subunit J4N37_14495 PF00202 Aminotransferase class-III J4N37_14505 PF00117 Glutamine amidotransferase class-I J4N37_14515 PF00579 tRNA synthetases class I (W and Y) J4N37_14520 PF13419 Haloacid dehalogenase-like hydrolase J4N37_14525 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N37_14525 PF00588 SpoU rRNA Methylase family J4N37_14530 PF08206 Ribonuclease B OB domain J4N37_14530 PF00575 S1 RNA binding domain J4N37_14530 PF08461 Ribonuclease R winged-helix domain J4N37_14530 PF00773 RNB domain J4N37_14530 PF17876 Cold shock domain J4N37_14535 PF02082 Transcriptional regulator J4N37_14540 PF00042 Globin J4N37_14540 PF00175 Oxidoreductase NAD-binding domain J4N37_14540 PF00970 Oxidoreductase FAD-binding domain J4N37_14545 PF08238 Sel1 repeat J4N37_14550 PF00709 Adenylosuccinate synthetase J4N37_14555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J4N37_14560 PF01145 SPFH domain / Band 7 family J4N37_14565 PF01145 SPFH domain / Band 7 family J4N37_14565 PF12221 Bacterial membrane protein N terminal J4N37_14570 PF01926 50S ribosome-binding GTPase J4N37_14570 PF16360 GTP-binding GTPase Middle Region J4N37_14570 PF13167 GTP-binding GTPase N-terminal J4N37_14575 PF17209 Hfq protein J4N37_14585 PF08676 MutL C terminal dimerisation domain J4N37_14585 PF01119 DNA mismatch repair protein, C-terminal domain J4N37_14590 PF01520 N-acetylmuramoyl-L-alanine amidase J4N37_14595 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4N37_14600 PF08331 Domain of unknown function (DUF1730) J4N37_14670 PF00929 Exonuclease J4N37_14675 PF03193 RsgA GTPase J4N37_14680 PF02666 Phosphatidylserine decarboxylase J4N37_14685 PF00939 Sodium:sulfate symporter transmembrane region J4N37_14690 PF00672 HAMP domain J4N37_14690 PF02743 Cache domain J4N37_14690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_14700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4N37_14700 PF01676 Metalloenzyme superfamily J4N37_14705 PF00581 Rhodanese-like domain J4N37_14710 PF02556 Preprotein translocase subunit SecB J4N37_14715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4N37_14715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4N37_14720 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_14720 PF06426 Serine acetyltransferase, N-terminal J4N37_14725 PF01551 Peptidase family M23 J4N37_14735 PF08360 QacR-like protein, C-terminal region J4N37_14735 PF00440 Bacterial regulatory proteins, tetR family J4N37_14740 PF00152 tRNA synthetases class II (D, K and N) J4N37_14745 PF00890 FAD binding domain J4N37_14745 PF02910 Fumarate reductase flavoprotein C-term J4N37_14750 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N37_14750 PF13183 4Fe-4S dicluster domain J4N37_14755 PF02300 Fumarate reductase subunit C J4N37_14760 PF02313 Fumarate reductase subunit D J4N37_14775 PF09285 Elongation factor P, C-terminal J4N37_14775 PF08207 Elongation factor P (EF-P) KOW-like domain J4N37_14775 PF01132 Elongation factor P (EF-P) OB domain J4N37_14780 PF04055 Radical SAM superfamily J4N37_14785 PF02308 MgtC family J4N37_14795 PF00118 TCP-1/cpn60 chaperonin family J4N37_14800 PF00166 Chaperonin 10 Kd subunit J4N37_14805 PF01554 MatE J4N37_14810 PF00365 Phosphofructokinase J4N37_14815 PF01545 Cation efflux family J4N37_14815 PF16916 Dimerisation domain of Zinc Transporter J4N37_14820 PF07813 LTXXQ motif family protein J4N37_14825 PF00486 Transcriptional regulatory protein, C terminal J4N37_14825 PF00072 Response regulator receiver domain J4N37_14830 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N37_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_14830 PF00512 His Kinase A (phospho-acceptor) domain J4N37_14830 PF00672 HAMP domain J4N37_14835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N37_14835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N37_14840 PF00588 SpoU rRNA Methylase family J4N37_14845 PF04186 FxsA cytoplasmic membrane protein J4N37_14850 PF10415 Fumarase C C-terminus J4N37_14850 PF00206 Lyase J4N37_14855 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N37_14860 PF02683 Cytochrome C biogenesis protein transmembrane region J4N37_14860 PF11412 Disulphide bond corrector protein DsbC J4N37_14865 PF00196 Bacterial regulatory proteins, luxR family J4N37_14865 PF00072 Response regulator receiver domain J4N37_14870 PF01914 MarC family integral membrane protein J4N37_14880 PF00474 Sodium:solute symporter family J4N37_14895 PF10415 Fumarase C C-terminus J4N37_14895 PF00206 Lyase J4N37_14900 PF00072 Response regulator receiver domain J4N37_14900 PF01627 Hpt domain J4N37_14900 PF00512 His Kinase A (phospho-acceptor) domain J4N37_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_14900 PF00672 HAMP domain J4N37_14905 PF12832 MFS_1 like family J4N37_14920 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N37_14920 PF00501 AMP-binding enzyme J4N37_14920 PF13193 AMP-binding enzyme C-terminal domain J4N37_14925 PF01220 Dehydroquinase class II J4N37_14930 PF00364 Biotin-requiring enzyme J4N37_14935 PF02785 Biotin carboxylase C-terminal domain J4N37_14935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N37_14935 PF00289 Biotin carboxylase, N-terminal domain J4N37_14945 PF01207 Dihydrouridine synthase (Dus) J4N37_14950 PF02954 Bacterial regulatory protein, Fis family J4N37_14955 PF00563 EAL domain J4N37_14955 PF00990 Diguanylate cyclase, GGDEF domain J4N37_14955 PF13188 PAS domain J4N37_14955 PF03707 Bacterial signalling protein N terminal repeat J4N37_15000 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J4N37_15000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4N37_15000 PF01276 Orn/Lys/Arg decarboxylase, major domain J4N37_15005 PF13520 Amino acid permease J4N37_15010 PF18500 CadC C-terminal domain 1 J4N37_15010 PF00486 Transcriptional regulatory protein, C terminal J4N37_15015 PF13411 MerR HTH family regulatory protein J4N37_15025 PF01808 AICARFT/IMPCHase bienzyme J4N37_15025 PF02142 MGS-like domain J4N37_15030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4N37_15030 PF02843 Phosphoribosylglycinamide synthetase, C domain J4N37_15030 PF02844 Phosphoribosylglycinamide synthetase, N domain J4N37_15040 PF00216 Bacterial DNA-binding protein J4N37_15045 PF00571 CBS domain J4N37_15045 PF01595 Cyclin M transmembrane N-terminal domain J4N37_15050 PF04222 Protein of unknown function (DUF416) J4N37_15055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N37_15060 PF03167 Uracil DNA glycosylase superfamily J4N37_15065 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4N37_15070 PF00293 NUDIX domain J4N37_15070 PF09297 NADH pyrophosphatase zinc ribbon domain J4N37_15075 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J4N37_15080 PF04983 RNA polymerase Rpb1, domain 3 J4N37_15080 PF05000 RNA polymerase Rpb1, domain 4 J4N37_15080 PF04998 RNA polymerase Rpb1, domain 5 J4N37_15080 PF04997 RNA polymerase Rpb1, domain 1 J4N37_15080 PF00623 RNA polymerase Rpb1, domain 2 J4N37_15085 PF04563 RNA polymerase beta subunit J4N37_15085 PF04561 RNA polymerase Rpb2, domain 2 J4N37_15085 PF04565 RNA polymerase Rpb2, domain 3 J4N37_15085 PF10385 RNA polymerase beta subunit external 1 domain J4N37_15085 PF00562 RNA polymerase Rpb2, domain 6 J4N37_15085 PF04560 RNA polymerase Rpb2, domain 7 J4N37_15090 PF00542 Ribosomal protein L7/L12 C-terminal domain J4N37_15090 PF16320 Ribosomal protein L7/L12 dimerisation domain J4N37_15095 PF00466 Ribosomal protein L10 J4N37_15100 PF00687 Ribosomal protein L1p/L10e family J4N37_15105 PF03946 Ribosomal protein L11, N-terminal domain J4N37_15105 PF00298 Ribosomal protein L11, RNA binding domain J4N37_15110 PF02357 Transcription termination factor nusG J4N37_15110 PF00467 KOW motif J4N37_15115 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4N37_15120 PF00009 Elongation factor Tu GTP binding domain J4N37_15120 PF03144 Elongation factor Tu domain 2 J4N37_15120 PF03143 Elongation factor Tu C-terminal domain J4N37_15145 PF00485 Phosphoribulokinase / Uridine kinase family J4N37_15150 PF08279 HTH domain J4N37_15150 PF02237 Biotin protein ligase C terminal domain J4N37_15150 PF03099 Biotin/lipoate A/B protein ligase family J4N37_15155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4N37_15155 PF01565 FAD binding domain J4N37_15165 PF13091 PLD-like domain J4N37_15250 PF01177 Asp/Glu/Hydantoin racemase J4N37_15260 PF07715 TonB-dependent Receptor Plug Domain J4N37_15260 PF00593 TonB dependent receptor J4N37_15265 PF05958 tRNA (Uracil-5-)-methyltransferase J4N37_15270 PF13542 Helix-turn-helix domain of transposase family ISL3 J4N37_15270 PF01610 Transposase J4N37_15270 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J4N37_15280 PF00440 Bacterial regulatory proteins, tetR family J4N37_15285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N37_15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_15290 PF01554 MatE J4N37_15300 PF01726 LexA DNA binding domain J4N37_15300 PF00717 Peptidase S24-like J4N37_15305 PF01553 Acyltransferase J4N37_15310 PF01040 UbiA prenyltransferase family J4N37_15315 PF04345 Chorismate lyase J4N37_15320 PF03748 Flagellar basal body-associated protein FliL J4N37_15325 PF01694 Rhomboid family J4N37_15325 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J4N37_15330 PF00581 Rhodanese-like domain J4N37_15335 PF04542 Sigma-70 region 2 J4N37_15335 PF04545 Sigma-70, region 4 J4N37_15335 PF00140 Sigma-70 factor, region 1.2 J4N37_15340 PF18075 FtsX extracellular domain J4N37_15345 PF00005 ABC transporter J4N37_15350 PF02881 SRP54-type protein, helical bundle domain J4N37_15350 PF00448 SRP54-type protein, GTPase domain J4N37_15365 PF01914 MarC family integral membrane protein J4N37_15410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N37_15410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N37_15415 PF01022 Bacterial regulatory protein, arsR family J4N37_15420 PF00563 EAL domain J4N37_15420 PF08668 HDOD domain J4N37_15425 PF01810 LysE type translocator J4N37_15430 PF12146 Serine aminopeptidase, S33 J4N37_15450 PF03942 DTW domain J4N37_15455 PF08495 FIST N domain J4N37_15455 PF10442 FIST C domain J4N37_15455 PF00990 Diguanylate cyclase, GGDEF domain J4N37_15455 PF00563 EAL domain J4N37_15460 PF13419 Haloacid dehalogenase-like hydrolase J4N37_15465 PF02899 Phage integrase, N-terminal SAM-like domain J4N37_15465 PF00589 Phage integrase family J4N37_15475 PF01678 Diaminopimelate epimerase J4N37_15480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N37_15480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N37_15490 PF01491 Frataxin-like domain J4N37_15495 PF12633 Adenylate cyclase NT domain J4N37_15495 PF01295 Adenylate cyclase, class-I J4N37_15500 PF03900 Porphobilinogen deaminase, C-terminal domain J4N37_15500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4N37_15505 PF02602 Uroporphyrinogen-III synthase HemD J4N37_15510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J4N37_15515 PF07219 HemY protein N-terminus J4N37_15550 PF00175 Oxidoreductase NAD-binding domain J4N37_15555 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_15560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4N37_15570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N37_15570 PF07498 Rho termination factor, N-terminal domain J4N37_15570 PF07497 Rho termination factor, RNA-binding domain J4N37_15575 PF00085 Thioredoxin J4N37_15580 PF00270 DEAD/DEAH box helicase J4N37_15580 PF00271 Helicase conserved C-terminal domain J4N37_15585 PF02541 Ppx/GppA phosphatase family J4N37_15590 PF02592 Putative vitamin uptake transporter J4N37_15600 PF00270 DEAD/DEAH box helicase J4N37_15600 PF00271 Helicase conserved C-terminal domain J4N37_15600 PF16124 RecQ zinc-binding J4N37_15600 PF09382 RQC domain J4N37_15600 PF00570 HRDC domain J4N37_15605 PF00892 EamA-like transporter family J4N37_15615 PF01810 LysE type translocator J4N37_15625 PF00580 UvrD/REP helicase N-terminal domain J4N37_15625 PF13361 UvrD-like helicase C-terminal domain J4N37_15635 PF05114 Protein of unknown function (DUF692) J4N37_15655 PF07690 Major Facilitator Superfamily J4N37_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_15660 PF03466 LysR substrate binding domain J4N37_15665 PF01321 Creatinase/Prolidase N-terminal domain J4N37_15665 PF00557 Metallopeptidase family M24 J4N37_15665 PF01321 Creatinase/Prolidase N-terminal domain J4N37_15665 PF00557 Metallopeptidase family M24 J4N37_15670 PF06968 Biotin and Thiamin Synthesis associated domain J4N37_15670 PF04055 Radical SAM superfamily J4N37_15675 PF05690 Thiazole biosynthesis protein ThiG J4N37_15680 PF02597 ThiS family J4N37_15685 PF00899 ThiF family J4N37_15690 PF02581 Thiamine monophosphate synthase J4N37_15695 PF01964 Radical SAM ThiC family J4N37_15695 PF13667 ThiC-associated domain J4N37_15700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4N37_15705 PF07732 Multicopper oxidase J4N37_15705 PF07731 Multicopper oxidase J4N37_15705 PF00394 Multicopper oxidase J4N37_15745 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_15750 PF07369 Protein of unknown function (DUF1488) J4N37_15755 PF08501 Shikimate dehydrogenase substrate binding domain J4N37_15755 PF01488 Shikimate / quinate 5-dehydrogenase J4N37_15755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4N37_15760 PF01218 Coproporphyrinogen III oxidase J4N37_15765 PF01300 Telomere recombination J4N37_15770 PF00731 AIR carboxylase J4N37_15775 PF02222 ATP-grasp domain J4N37_15775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4N37_15780 PF01396 Topoisomerase DNA binding C4 zinc finger J4N37_15785 PF04361 Protein of unknown function (DUF494) J4N37_15790 PF02481 DNA recombination-mediator protein A J4N37_15790 PF17782 DprA winged helix domain J4N37_15800 PF01327 Polypeptide deformylase J4N37_15805 PF02911 Formyl transferase, C-terminal domain J4N37_15805 PF00551 Formyl transferase J4N37_15810 PF01029 NusB family J4N37_15810 PF01189 16S rRNA methyltransferase RsmB/F J4N37_15815 PF02254 TrkA-N domain J4N37_15815 PF02080 TrkA-C domain J4N37_15820 PF02386 Cation transport protein J4N37_15830 PF03006 Haemolysin-III related J4N37_15835 PF07070 SpoOM protein J4N37_15845 PF06288 Protein of unknown function (DUF1040) J4N37_15850 PF13746 4Fe-4S dicluster domain J4N37_15850 PF12801 4Fe-4S binding domain J4N37_15850 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4N37_15855 PF01636 Phosphotransferase enzyme family J4N37_15860 PF01323 DSBA-like thioredoxin domain J4N37_15865 PF01553 Acyltransferase J4N37_15875 PF08448 PAS fold J4N37_15875 PF00990 Diguanylate cyclase, GGDEF domain J4N37_15880 PF13335 Magnesium chelatase, subunit ChlI C-terminal J4N37_15880 PF01078 Magnesium chelatase, subunit ChlI J4N37_15885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N37_15885 PF00205 Thiamine pyrophosphate enzyme, central domain J4N37_15885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N37_15895 PF01063 Amino-transferase class IV J4N37_15900 PF00920 Dehydratase family J4N37_15905 PF00291 Pyridoxal-phosphate dependent enzyme J4N37_15905 PF00585 C-terminal regulatory domain of Threonine dehydratase J4N37_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_15910 PF03466 LysR substrate binding domain J4N37_15915 PF07690 Major Facilitator Superfamily J4N37_15920 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_15925 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_15930 PF12804 MobA-like NTP transferase domain J4N37_15930 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_15935 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4N37_15935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4N37_15940 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N37_15940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N37_15945 PF00231 ATP synthase J4N37_15950 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N37_15950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N37_15950 PF00306 ATP synthase alpha/beta chain, C terminal domain J4N37_15955 PF00213 ATP synthase delta (OSCP) subunit J4N37_15960 PF00430 ATP synthase B/B' CF(0) J4N37_15965 PF00137 ATP synthase subunit C J4N37_15970 PF00119 ATP synthase A chain J4N37_15975 PF03899 ATP synthase I chain J4N37_15980 PF17762 HTH domain found in ParB protein J4N37_15980 PF02195 ParB-like nuclease domain J4N37_15985 PF13614 AAA domain J4N37_15990 PF02527 rRNA small subunit methyltransferase G J4N37_15995 PF01134 Glucose inhibited division protein A J4N37_15995 PF13932 GidA associated domain J4N37_16000 PF00258 Flavodoxin J4N37_16005 PF10396 GTP-binding protein TrmE N-terminus J4N37_16005 PF12631 MnmE helical domain J4N37_16005 PF01926 50S ribosome-binding GTPase J4N37_16010 PF02096 60Kd inner membrane protein J4N37_16010 PF14849 YidC periplasmic domain J4N37_16015 PF01809 Putative membrane protein insertion efficiency factor J4N37_16020 PF00825 Ribonuclease P J4N37_16025 PF00468 Ribosomal protein L34 J4N37_16030 PF00005 ABC transporter J4N37_16035 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_16040 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_16050 PF05840 Bacteriophage replication gene A protein (GPA) J4N37_16070 PF01253 Translation initiation factor SUI1 J4N37_16080 PF07478 D-ala D-ala ligase C-terminus J4N37_16080 PF01820 D-ala D-ala ligase N-terminus J4N37_16085 PF05036 Sporulation related domain J4N37_16090 PF13607 Succinyl-CoA ligase like flavodoxin domain J4N37_16090 PF13380 CoA binding domain J4N37_16090 PF00583 Acetyltransferase (GNAT) family J4N37_16095 PF03466 LysR substrate binding domain J4N37_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_16100 PF00593 TonB dependent receptor J4N37_16100 PF07715 TonB-dependent Receptor Plug Domain J4N37_16100 PF04886 PT repeat J4N37_16105 PF01610 Transposase J4N37_16105 PF13542 Helix-turn-helix domain of transposase family ISL3 J4N37_16105 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 J4N37_16110 PF16363 GDP-mannose 4,6 dehydratase J4N37_16115 PF13426 PAS domain J4N37_16115 PF08448 PAS fold J4N37_16115 PF08447 PAS fold J4N37_16115 PF05231 MASE1 J4N37_16115 PF00563 EAL domain J4N37_16115 PF00990 Diguanylate cyclase, GGDEF domain J4N37_16120 PF03746 LamB/YcsF family J4N37_16125 PF02682 Carboxyltransferase domain, subdomain C and D J4N37_16130 PF02626 Carboxyltransferase domain, subdomain A and B J4N37_16145 PF00005 ABC transporter J4N37_16150 PF13472 GDSL-like Lipase/Acylhydrolase family J4N37_16155 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N37_16155 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N37_16155 PF07055 Enoyl reductase FAD binding domain J4N37_16160 PF13188 PAS domain J4N37_16160 PF00990 Diguanylate cyclase, GGDEF domain J4N37_16160 PF03707 Bacterial signalling protein N terminal repeat J4N37_16160 PF00563 EAL domain J4N37_16170 PF00226 DnaJ domain J4N37_16170 PF01556 DnaJ C terminal domain J4N37_16170 PF00684 DnaJ central domain J4N37_16195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_16195 PF12793 Sugar transport-related sRNA regulator N-term J4N37_16205 PF03061 Thioesterase superfamily J4N37_16220 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N37_16225 PF12262 Bacterial virulence factor lipase N-terminal J4N37_16240 PF00809 Pterin binding enzyme J4N37_16240 PF02607 B12 binding domain J4N37_16240 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N37_16240 PF02574 Homocysteine S-methyltransferase J4N37_16240 PF02310 B12 binding domain J4N37_16250 PF03741 Integral membrane protein TerC family J4N37_16255 PF02872 5'-nucleotidase, C-terminal domain J4N37_16255 PF00149 Calcineurin-like phosphoesterase J4N37_16260 PF11398 Protein of unknown function (DUF2813) J4N37_16265 PF06496 Protein of unknown function (DUF1097) J4N37_16270 PF03466 LysR substrate binding domain J4N37_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_16275 PF01226 Formate/nitrite transporter J4N37_16280 PF04264 YceI-like domain J4N37_16285 PF01292 Prokaryotic cytochrome b561 J4N37_16300 PF00563 EAL domain J4N37_16300 PF12792 CSS motif domain associated with EAL J4N37_16305 PF00271 Helicase conserved C-terminal domain J4N37_16305 PF00270 DEAD/DEAH box helicase J4N37_16310 PF04336 Acyl carrier protein phosphodiesterase J4N37_16315 PF12729 Four helix bundle sensory module for signal transduction J4N37_16315 PF00672 HAMP domain J4N37_16315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_16320 PF13419 Haloacid dehalogenase-like hydrolase J4N37_16325 PF11849 Domain of unknown function (DUF3369) J4N37_16340 PF00294 pfkB family carbohydrate kinase J4N37_16345 PF01268 Formate--tetrahydrofolate ligase J4N37_16350 PF00483 Nucleotidyl transferase J4N37_16355 PF00704 Glycosyl hydrolases family 18 J4N37_16355 PF06483 Chitinase C J4N37_16360 PF12833 Helix-turn-helix domain J4N37_16360 PF06719 AraC-type transcriptional regulator N-terminus J4N37_16365 PF00465 Iron-containing alcohol dehydrogenase J4N37_16375 PF00072 Response regulator receiver domain J4N37_16375 PF02954 Bacterial regulatory protein, Fis family J4N37_16375 PF14532 Sigma-54 interaction domain J4N37_16380 PF00672 HAMP domain J4N37_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_16380 PF00512 His Kinase A (phospho-acceptor) domain J4N37_16390 PF07690 Major Facilitator Superfamily J4N37_16395 PF02887 Pyruvate kinase, alpha/beta domain J4N37_16395 PF00224 Pyruvate kinase, barrel domain J4N37_16400 PF00005 ABC transporter J4N37_16405 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_16410 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_16415 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_16420 PF00989 PAS fold J4N37_16420 PF01590 GAF domain J4N37_16420 PF00990 Diguanylate cyclase, GGDEF domain J4N37_16420 PF00563 EAL domain J4N37_16435 PF00356 Bacterial regulatory proteins, lacI family J4N37_16435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N37_16440 PF00381 PTS HPr component phosphorylation site J4N37_16440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N37_16445 PF00294 pfkB family carbohydrate kinase J4N37_16450 PF02378 Phosphotransferase system, EIIC J4N37_16450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N37_16460 PF00873 AcrB/AcrD/AcrF family J4N37_16465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_16470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_16480 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4N37_16480 PF01571 Aminomethyltransferase folate-binding domain J4N37_16490 PF00464 Serine hydroxymethyltransferase J4N37_16495 PF01597 Glycine cleavage H-protein J4N37_16500 PF02347 Glycine cleavage system P-protein J4N37_16530 PF07690 Major Facilitator Superfamily J4N37_16555 PF01039 Carboxyl transferase domain J4N37_16555 PF17848 Acetyl-coA carboxylase zinc finger domain J4N37_16560 PF03466 LysR substrate binding domain J4N37_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_16585 PF01638 HxlR-like helix-turn-helix J4N37_16595 PF00664 ABC transporter transmembrane region J4N37_16595 PF00005 ABC transporter J4N37_16615 PF00293 NUDIX domain J4N37_16630 PF01757 Acyltransferase family J4N37_16650 PF04266 ASCH domain J4N37_16670 PF00561 alpha/beta hydrolase fold J4N37_16670 PF00364 Biotin-requiring enzyme J4N37_16720 PF12833 Helix-turn-helix domain J4N37_16720 PF00072 Response regulator receiver domain J4N37_16745 PF00072 Response regulator receiver domain J4N37_16745 PF00990 Diguanylate cyclase, GGDEF domain J4N37_16755 PF03466 LysR substrate binding domain J4N37_16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_16770 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N37_16785 PF02630 SCO1/SenC J4N37_16790 PF08534 Redoxin J4N37_16805 PF01594 AI-2E family transporter J4N37_16810 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_16810 PF12464 Maltose acetyltransferase J4N37_16820 PF02743 Cache domain J4N37_16820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_16820 PF00672 HAMP domain J4N37_16825 PF02469 Fasciclin domain J4N37_16840 PF01476 LysM domain J4N37_16840 PF08525 Opacity-associated protein A N-terminal motif J4N37_16840 PF01551 Peptidase family M23 J4N37_16845 PF09339 IclR helix-turn-helix domain J4N37_16845 PF01614 Bacterial transcriptional regulator J4N37_16850 PF00106 short chain dehydrogenase J4N37_16855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N37_16880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_16885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N37_16895 PF01757 Acyltransferase family J4N37_16905 PF09722 Protein of unknown function (DUF2384) J4N37_16910 PF01645 Conserved region in glutamate synthase J4N37_16910 PF13187 4Fe-4S dicluster domain J4N37_16920 PF00753 Metallo-beta-lactamase superfamily J4N37_16925 PF00171 Aldehyde dehydrogenase family J4N37_16950 PF00892 EamA-like transporter family J4N37_16955 PF00893 Small Multidrug Resistance protein J4N37_16960 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N37_16960 PF03413 Peptidase propeptide and YPEB domain J4N37_16960 PF01447 Thermolysin metallopeptidase, catalytic domain J4N37_16960 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N37_16960 PF04151 Bacterial pre-peptidase C-terminal domain J4N37_16980 PF00892 EamA-like transporter family J4N37_16990 PF00072 Response regulator receiver domain J4N37_16990 PF01584 CheW-like domain J4N37_17005 PF00563 EAL domain J4N37_17005 PF00990 Diguanylate cyclase, GGDEF domain J4N37_17005 PF05231 MASE1 J4N37_17005 PF08447 PAS fold J4N37_17005 PF08448 PAS fold J4N37_17005 PF13426 PAS domain J4N37_17010 PF02195 ParB-like nuclease domain J4N37_17015 PF11922 Domain of unknown function (DUF3440) J4N37_17015 PF01507 Phosphoadenosine phosphosulfate reductase family J4N37_17040 PF08447 PAS fold J4N37_17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_17040 PF13426 PAS domain J4N37_17050 PF00816 H-NS histone family J4N37_17055 PF00072 Response regulator receiver domain J4N37_17055 PF00196 Bacterial regulatory proteins, luxR family J4N37_17065 PF00072 Response regulator receiver domain J4N37_17065 PF00196 Bacterial regulatory proteins, luxR family J4N37_17070 PF13188 PAS domain J4N37_17070 PF03707 Bacterial signalling protein N terminal repeat J4N37_17070 PF00563 EAL domain J4N37_17070 PF00990 Diguanylate cyclase, GGDEF domain J4N37_17075 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N37_17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_17075 PF00512 His Kinase A (phospho-acceptor) domain J4N37_17075 PF00072 Response regulator receiver domain J4N37_17080 PF01926 50S ribosome-binding GTPase J4N37_17085 PF00155 Aminotransferase class I and II J4N37_17090 PF00072 Response regulator receiver domain J4N37_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_17105 PF03606 C4-dicarboxylate anaerobic carrier J4N37_17110 PF04011 LemA family J4N37_17115 PF01435 Peptidase family M48 J4N37_17130 PF18081 Fanconi anemia-associated nuclease SAP domain J4N37_17130 PF08774 VRR-NUC domain J4N37_17140 PF13186 Iron-sulfur cluster-binding domain J4N37_17140 PF04055 Radical SAM superfamily J4N37_17145 PF03781 Sulfatase-modifying factor enzyme 1 J4N37_17160 PF04076 Bacterial OB fold (BOF) protein J4N37_17165 PF00781 Diacylglycerol kinase catalytic domain J4N37_17170 PF03466 LysR substrate binding domain J4N37_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_17175 PF01872 RibD C-terminal domain J4N37_17175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N37_17190 PF00092 von Willebrand factor type A domain J4N37_17205 PF17863 AAA lid domain J4N37_17205 PF07726 ATPase family associated with various cellular activities (AAA) J4N37_17210 PF04055 Radical SAM superfamily J4N37_17210 PF13186 Iron-sulfur cluster-binding domain J4N37_17215 PF00884 Sulfatase J4N37_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_17220 PF03466 LysR substrate binding domain J4N37_17230 PF00884 Sulfatase J4N37_17235 PF00884 Sulfatase J4N37_17240 PF00072 Response regulator receiver domain J4N37_17240 PF00486 Transcriptional regulatory protein, C terminal J4N37_17245 PF00672 HAMP domain J4N37_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_17245 PF00512 His Kinase A (phospho-acceptor) domain J4N37_17245 PF16750 Sensor domain of 2-component histidine kinase J4N37_17255 PF02374 Anion-transporting ATPase J4N37_17255 PF17886 HSP20-like domain found in ArsA J4N37_17260 PF00486 Transcriptional regulatory protein, C terminal J4N37_17260 PF00072 Response regulator receiver domain J4N37_17280 PF00012 Hsp70 protein J4N37_17295 PF01773 Na+ dependent nucleoside transporter N-terminus J4N37_17295 PF07670 Nucleoside recognition J4N37_17295 PF07662 Na+ dependent nucleoside transporter C-terminus J4N37_17300 PF02525 Flavodoxin-like fold J4N37_17305 PF00676 Dehydrogenase E1 component J4N37_17310 PF02779 Transketolase, pyrimidine binding domain J4N37_17310 PF02780 Transketolase, C-terminal domain J4N37_17315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N37_17315 PF00364 Biotin-requiring enzyme J4N37_17315 PF02817 e3 binding domain J4N37_17320 PF00766 Electron transfer flavoprotein FAD-binding domain J4N37_17320 PF01012 Electron transfer flavoprotein domain J4N37_17325 PF01012 Electron transfer flavoprotein domain J4N37_17335 PF03466 LysR substrate binding domain J4N37_17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_17355 PF02424 ApbE family J4N37_17360 PF03358 NADPH-dependent FMN reductase J4N37_17360 PF04205 FMN-binding domain J4N37_17360 PF00890 FAD binding domain J4N37_17370 PF02321 Outer membrane efflux protein J4N37_17385 PF00043 Glutathione S-transferase, C-terminal domain J4N37_17385 PF13417 Glutathione S-transferase, N-terminal domain J4N37_17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_17390 PF03466 LysR substrate binding domain J4N37_17400 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_17405 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_17410 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_17415 PF00005 ABC transporter J4N37_17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_17420 PF00672 HAMP domain J4N37_17420 PF02743 Cache domain J4N37_17450 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_17460 PF00171 Aldehyde dehydrogenase family J4N37_17475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N37_17475 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_17480 PF01040 UbiA prenyltransferase family J4N37_17485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4N37_17490 PF00510 Cytochrome c oxidase subunit III J4N37_17495 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N37_17500 PF06481 COX Aromatic Rich Motif J4N37_17500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N37_17510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N37_17510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N37_17515 PF00378 Enoyl-CoA hydratase/isomerase J4N37_17520 PF00378 Enoyl-CoA hydratase/isomerase J4N37_17525 PF02770 Acyl-CoA dehydrogenase, middle domain J4N37_17525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N37_17525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N37_17530 PF00171 Aldehyde dehydrogenase family J4N37_17535 PF02803 Thiolase, C-terminal domain J4N37_17535 PF00108 Thiolase, N-terminal domain J4N37_17540 PF09278 MerR, DNA binding J4N37_17540 PF00376 MerR family regulatory protein J4N37_17545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N37_17545 PF02770 Acyl-CoA dehydrogenase, middle domain J4N37_17545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N37_17550 PF01039 Carboxyl transferase domain J4N37_17555 PF00378 Enoyl-CoA hydratase/isomerase J4N37_17560 PF00682 HMGL-like J4N37_17580 PF00034 Cytochrome c J4N37_17585 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N37_17595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N37_17595 PF00034 Cytochrome c J4N37_17600 PF00871 Acetokinase family J4N37_17605 PF00271 Helicase conserved C-terminal domain J4N37_17605 PF00270 DEAD/DEAH box helicase J4N37_17605 PF03880 DbpA RNA binding domain J4N37_17610 PF00575 S1 RNA binding domain J4N37_17610 PF00773 RNB domain J4N37_17610 PF08206 Ribonuclease B OB domain J4N37_17615 PF12833 Helix-turn-helix domain J4N37_17625 PF12849 PBP superfamily domain J4N37_17630 PF01575 MaoC like domain J4N37_17640 PF00005 ABC transporter J4N37_17645 PF12792 CSS motif domain associated with EAL J4N37_17645 PF00563 EAL domain J4N37_17665 PF00270 DEAD/DEAH box helicase J4N37_17665 PF00271 Helicase conserved C-terminal domain J4N37_17675 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N37_17675 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N37_17685 PF01470 Pyroglutamyl peptidase J4N37_17710 PF12843 Putative quorum-sensing-regulated virulence factor J4N37_17735 PF01329 Pterin 4 alpha carbinolamine dehydratase J4N37_17740 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4N37_17745 PF13193 AMP-binding enzyme C-terminal domain J4N37_17745 PF00501 AMP-binding enzyme J4N37_17755 PF03466 LysR substrate binding domain J4N37_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_17770 PF00892 EamA-like transporter family J4N37_17785 PF00465 Iron-containing alcohol dehydrogenase J4N37_17790 PF07995 Glucose / Sorbosone dehydrogenase J4N37_17795 PF02016 LD-carboxypeptidase N-terminal domain J4N37_17795 PF17676 LD-carboxypeptidase C-terminal domain J4N37_17805 PF04116 Fatty acid hydroxylase superfamily J4N37_17820 PF00989 PAS fold J4N37_17820 PF01627 Hpt domain J4N37_17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_17820 PF00512 His Kinase A (phospho-acceptor) domain J4N37_17820 PF00072 Response regulator receiver domain J4N37_17820 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N37_17825 PF00360 Phytochrome region J4N37_17825 PF00990 Diguanylate cyclase, GGDEF domain J4N37_17825 PF01590 GAF domain J4N37_17825 PF00563 EAL domain J4N37_17840 PF16200 C-terminal region of band_7 J4N37_17840 PF01145 SPFH domain / Band 7 family J4N37_17850 PF00881 Nitroreductase family J4N37_17860 PF00571 CBS domain J4N37_17860 PF00005 ABC transporter J4N37_17865 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_17870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4N37_17875 PF00732 GMC oxidoreductase J4N37_17875 PF05199 GMC oxidoreductase J4N37_17880 PF00171 Aldehyde dehydrogenase family J4N37_17885 PF13977 BetI-type transcriptional repressor, C-terminal J4N37_17885 PF00440 Bacterial regulatory proteins, tetR family J4N37_17890 PF00171 Aldehyde dehydrogenase family J4N37_17895 PF12833 Helix-turn-helix domain J4N37_17895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4N37_17905 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4N37_17910 PF01797 Transposase IS200 like J4N37_17920 PF01979 Amidohydrolase family J4N37_17925 PF07963 Prokaryotic N-terminal methylation motif J4N37_17940 PF06940 Domain of unknown function (DUF1287) J4N37_17950 PF08241 Methyltransferase domain J4N37_17955 PF13419 Haloacid dehalogenase-like hydrolase J4N37_17975 PF00478 IMP dehydrogenase / GMP reductase domain J4N37_17985 PF03853 YjeF-related protein N-terminus J4N37_17985 PF01256 Carbohydrate kinase J4N37_17995 PF00072 Response regulator receiver domain J4N37_18000 PF00196 Bacterial regulatory proteins, luxR family J4N37_18000 PF00072 Response regulator receiver domain J4N37_18005 PF00672 HAMP domain J4N37_18005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18005 PF07730 Histidine kinase J4N37_18005 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4N37_18010 PF12838 4Fe-4S dicluster domain J4N37_18010 PF13187 4Fe-4S dicluster domain J4N37_18020 PF01568 Molydopterin dinucleotide binding domain J4N37_18020 PF00384 Molybdopterin oxidoreductase J4N37_18020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N37_18025 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J4N37_18030 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N37_18040 PF00561 alpha/beta hydrolase fold J4N37_18040 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J4N37_18050 PF00108 Thiolase, N-terminal domain J4N37_18050 PF02803 Thiolase, C-terminal domain J4N37_18055 PF00106 short chain dehydrogenase J4N37_18060 PF01810 LysE type translocator J4N37_18070 PF02355 Protein export membrane protein J4N37_18070 PF07549 SecD/SecF GG Motif J4N37_18075 PF02355 Protein export membrane protein J4N37_18075 PF07549 SecD/SecF GG Motif J4N37_18075 PF13721 SecD export protein N-terminal TM region J4N37_18100 PF01037 Lrp/AsnC ligand binding domain J4N37_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18115 PF00512 His Kinase A (phospho-acceptor) domain J4N37_18115 PF09308 LuxQ, periplasmic J4N37_18115 PF00072 Response regulator receiver domain J4N37_18120 PF13407 Periplasmic binding protein domain J4N37_18125 PF01541 GIY-YIG catalytic domain J4N37_18130 PF04337 Protein of unknown function, DUF480 J4N37_18140 PF04363 Protein of unknown function (DUF496) J4N37_18145 PF01554 MatE J4N37_18150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N37_18155 PF00672 HAMP domain J4N37_18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18155 PF00512 His Kinase A (phospho-acceptor) domain J4N37_18155 PF01627 Hpt domain J4N37_18155 PF00072 Response regulator receiver domain J4N37_18155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N37_18160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N37_18160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N37_18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18175 PF03466 LysR substrate binding domain J4N37_18190 PF13520 Amino acid permease J4N37_18200 PF00873 AcrB/AcrD/AcrF family J4N37_18205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_18210 PF00155 Aminotransferase class I and II J4N37_18210 PF00392 Bacterial regulatory proteins, gntR family J4N37_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18220 PF00512 His Kinase A (phospho-acceptor) domain J4N37_18220 PF00672 HAMP domain J4N37_18220 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N37_18225 PF00072 Response regulator receiver domain J4N37_18225 PF00486 Transcriptional regulatory protein, C terminal J4N37_18235 PF12833 Helix-turn-helix domain J4N37_18245 PF00529 HlyD membrane-fusion protein of T1SS J4N37_18245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_18250 PF03109 ABC1 family J4N37_18255 PF00571 CBS domain J4N37_18255 PF01769 Divalent cation transporter J4N37_18255 PF03448 MgtE intracellular N domain J4N37_18260 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4N37_18265 PF07969 Amidohydrolase family J4N37_18275 PF01966 HD domain J4N37_18290 PF07690 Major Facilitator Superfamily J4N37_18300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N37_18305 PF00255 Glutathione peroxidase J4N37_18320 PF01323 DSBA-like thioredoxin domain J4N37_18335 PF00106 short chain dehydrogenase J4N37_18345 PF00072 Response regulator receiver domain J4N37_18345 PF00486 Transcriptional regulatory protein, C terminal J4N37_18350 PF00512 His Kinase A (phospho-acceptor) domain J4N37_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18350 PF00672 HAMP domain J4N37_18360 PF01219 Prokaryotic diacylglycerol kinase J4N37_18365 PF08019 Phosphoethanolamine transferase EptA/EptB J4N37_18365 PF00884 Sulfatase J4N37_18370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N37_18380 PF00857 Isochorismatase family J4N37_18390 PF07690 Major Facilitator Superfamily J4N37_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18410 PF03466 LysR substrate binding domain J4N37_18415 PF02525 Flavodoxin-like fold J4N37_18420 PF00999 Sodium/hydrogen exchanger family J4N37_18420 PF02254 TrkA-N domain J4N37_18430 PF03466 LysR substrate binding domain J4N37_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18460 PF03466 LysR substrate binding domain J4N37_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18485 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N37_18485 PF08659 KR domain J4N37_18485 PF14765 Polyketide synthase dehydratase J4N37_18485 PF16197 Ketoacyl-synthetase C-terminal extension J4N37_18485 PF00550 Phosphopantetheine attachment site J4N37_18485 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N37_18485 PF00107 Zinc-binding dehydrogenase J4N37_18485 PF00698 Acyl transferase domain J4N37_18485 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_18505 PF00248 Aldo/keto reductase family J4N37_18510 PF03466 LysR substrate binding domain J4N37_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18525 PF01638 HxlR-like helix-turn-helix J4N37_18540 PF01758 Sodium Bile acid symporter family J4N37_18555 PF01161 Phosphatidylethanolamine-binding protein J4N37_18560 PF02567 Phenazine biosynthesis-like protein J4N37_18565 PF00375 Sodium:dicarboxylate symporter family J4N37_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_18580 PF00127 Copper binding proteins, plastocyanin/azurin family J4N37_18585 PF02378 Phosphotransferase system, EIIC J4N37_18600 PF00563 EAL domain J4N37_18600 PF00360 Phytochrome region J4N37_18600 PF00990 Diguanylate cyclase, GGDEF domain J4N37_18600 PF01590 GAF domain J4N37_18610 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_18610 PF12464 Maltose acetyltransferase J4N37_18615 PF00529 HlyD membrane-fusion protein of T1SS J4N37_18615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_18620 PF00664 ABC transporter transmembrane region J4N37_18620 PF00005 ABC transporter J4N37_18630 PF00196 Bacterial regulatory proteins, luxR family J4N37_18635 PF00196 Bacterial regulatory proteins, luxR family J4N37_18645 PF02743 Cache domain J4N37_18645 PF00672 HAMP domain J4N37_18645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_18650 PF07726 ATPase family associated with various cellular activities (AAA) J4N37_18650 PF17863 AAA lid domain J4N37_18655 PF01882 Protein of unknown function DUF58 J4N37_18665 PF13519 von Willebrand factor type A domain J4N37_18670 PF13519 von Willebrand factor type A domain J4N37_18680 PF00990 Diguanylate cyclase, GGDEF domain J4N37_18685 PF00005 ABC transporter J4N37_18690 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_18695 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_18700 PF12849 PBP superfamily domain J4N37_18705 PF02743 Cache domain J4N37_18705 PF00672 HAMP domain J4N37_18705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_18725 PF07715 TonB-dependent Receptor Plug Domain J4N37_18725 PF00593 TonB dependent receptor J4N37_18730 PF00326 Prolyl oligopeptidase family J4N37_18730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N37_18735 PF00271 Helicase conserved C-terminal domain J4N37_18735 PF00270 DEAD/DEAH box helicase J4N37_18745 PF17969 L,D-transpeptidase C-terminal domain J4N37_18745 PF03734 L,D-transpeptidase catalytic domain J4N37_18745 PF01476 LysM domain J4N37_18750 PF03441 FAD binding domain of DNA photolyase J4N37_18750 PF00875 DNA photolyase J4N37_18755 PF13411 MerR HTH family regulatory protein J4N37_18760 PF08349 Protein of unknown function (DUF1722) J4N37_18765 PF01048 Phosphorylase superfamily J4N37_18780 PF00990 Diguanylate cyclase, GGDEF domain J4N37_18790 PF11742 Protein of unknown function (DUF3302) J4N37_18795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_18795 PF00529 HlyD membrane-fusion protein of T1SS J4N37_18800 PF07155 ECF-type riboflavin transporter, S component J4N37_18805 PF00005 ABC transporter J4N37_18805 PF12558 ATP-binding cassette cobalt transporter J4N37_18820 PF12837 4Fe-4S binding domain J4N37_18820 PF12801 4Fe-4S binding domain J4N37_18825 PF12800 4Fe-4S binding domain J4N37_18825 PF12838 4Fe-4S dicluster domain J4N37_18830 PF13302 Acetyltransferase (GNAT) domain J4N37_18845 PF07238 PilZ domain J4N37_18845 PF12945 Flagellar protein YcgR J4N37_18850 PF00672 HAMP domain J4N37_18850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_18850 PF17200 Single Cache domain 2 J4N37_18855 PF00672 HAMP domain J4N37_18855 PF16591 Helical bimodular sensor domain J4N37_18855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_18860 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N37_18860 PF13654 AAA domain J4N37_18870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_18870 PF00005 ABC transporter J4N37_18875 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N37_18875 PF00326 Prolyl oligopeptidase family J4N37_18880 PF03466 LysR substrate binding domain J4N37_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18885 PF02652 L-lactate permease J4N37_18890 PF01070 FMN-dependent dehydrogenase J4N37_18905 PF00924 Mechanosensitive ion channel J4N37_18910 PF00194 Eukaryotic-type carbonic anhydrase J4N37_18920 PF05638 Type VI secretion system effector, Hcp J4N37_18925 PF00107 Zinc-binding dehydrogenase J4N37_18925 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_18930 PF00155 Aminotransferase class I and II J4N37_18935 PF13426 PAS domain J4N37_18935 PF08448 PAS fold J4N37_18935 PF00512 His Kinase A (phospho-acceptor) domain J4N37_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_18935 PF00072 Response regulator receiver domain J4N37_18940 PF00072 Response regulator receiver domain J4N37_18940 PF00486 Transcriptional regulatory protein, C terminal J4N37_18960 PF03466 LysR substrate binding domain J4N37_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_18980 PF03466 LysR substrate binding domain J4N37_19005 PF03466 LysR substrate binding domain J4N37_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_19015 PF00563 EAL domain J4N37_19015 PF05231 MASE1 J4N37_19025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N37_19025 PF18269 T3SS EscN ATPase C-terminal domain J4N37_19035 PF01706 FliG C-terminal domain J4N37_19035 PF14841 FliG middle domain J4N37_19035 PF14842 FliG N-terminal domain J4N37_19040 PF01514 Secretory protein of YscJ/FliF family J4N37_19040 PF08345 Flagellar M-ring protein C-terminal J4N37_19045 PF02049 Flagellar hook-basal body complex protein FliE J4N37_19050 PF00158 Sigma-54 interaction domain J4N37_19050 PF00072 Response regulator receiver domain J4N37_19050 PF02954 Bacterial regulatory protein, Fis family J4N37_19055 PF00691 OmpA family J4N37_19065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N37_19070 PF00813 FliP family J4N37_19075 PF01313 Bacterial export proteins, family 3 J4N37_19080 PF01311 Bacterial export proteins, family 1 J4N37_19085 PF01312 FlhB HrpN YscU SpaS Family J4N37_19090 PF00771 FHIPEP family J4N37_19100 PF00700 Bacterial flagellin C-terminal helical region J4N37_19100 PF00669 Bacterial flagellin N-terminal helical region J4N37_19105 PF07196 Flagellin hook IN motif J4N37_19105 PF07195 Flagellar hook-associated protein 2 C-terminus J4N37_19105 PF02465 Flagellar hook-associated protein 2 N-terminus J4N37_19110 PF02561 Flagellar protein FliS J4N37_19125 PF03748 Flagellar basal body-associated protein FliL J4N37_19130 PF04545 Sigma-70, region 4 J4N37_19130 PF04542 Sigma-70 region 2 J4N37_19135 PF01618 MotA/TolQ/ExbB proton channel family J4N37_19140 PF00691 OmpA family J4N37_19140 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N37_19145 PF08000 Bacterial PH domain J4N37_19175 PF08241 Methyltransferase domain J4N37_19190 PF00486 Transcriptional regulatory protein, C terminal J4N37_19190 PF18500 CadC C-terminal domain 1 J4N37_19195 PF03471 Transporter associated domain J4N37_19195 PF03741 Integral membrane protein TerC family J4N37_19210 PF01070 FMN-dependent dehydrogenase J4N37_19235 PF00460 Flagella basal body rod protein J4N37_19235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_19240 PF10135 Rod binding protein J4N37_19240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N37_19245 PF02119 Flagellar P-ring protein J4N37_19250 PF02107 Flagellar L-ring protein J4N37_19255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_19255 PF00460 Flagella basal body rod protein J4N37_19260 PF00460 Flagella basal body rod protein J4N37_19260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_19265 PF00460 Flagella basal body rod protein J4N37_19265 PF07559 Flagellar basal body protein FlaE J4N37_19265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_19270 PF03963 Flagellar hook capping protein - N-terminal region J4N37_19270 PF13860 FlgD Ig-like domain J4N37_19270 PF13861 FlgD Tudor-like domain J4N37_19275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N37_19275 PF00460 Flagella basal body rod protein J4N37_19280 PF00460 Flagella basal body rod protein J4N37_19300 PF01464 Transglycosylase SLT domain J4N37_19300 PF01476 LysM domain J4N37_19325 PF03313 Serine dehydratase alpha chain J4N37_19325 PF03315 Serine dehydratase beta chain J4N37_19330 PF00854 POT family J4N37_19335 PF01566 Natural resistance-associated macrophage protein J4N37_19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_19355 PF03466 LysR substrate binding domain J4N37_19360 PF00691 OmpA family J4N37_19360 PF01389 OmpA-like transmembrane domain J4N37_19365 PF00246 Zinc carboxypeptidase J4N37_19365 PF18027 Cytosolic carboxypeptidase N-terminal domain J4N37_19370 PF01266 FAD dependent oxidoreductase J4N37_19385 PF07702 UTRA domain J4N37_19385 PF00392 Bacterial regulatory proteins, gntR family J4N37_19390 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_19395 PF00005 ABC transporter J4N37_19405 PF00266 Aminotransferase class-V J4N37_19410 PF00202 Aminotransferase class-III J4N37_19415 PF13419 Haloacid dehalogenase-like hydrolase J4N37_19425 PF05922 Peptidase inhibitor I9 J4N37_19425 PF00082 Subtilase family J4N37_19430 PF00657 GDSL-like Lipase/Acylhydrolase J4N37_19460 PF13419 Haloacid dehalogenase-like hydrolase J4N37_19465 PF03466 LysR substrate binding domain J4N37_19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_19500 PF12464 Maltose acetyltransferase J4N37_19500 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_19505 PF02566 OsmC-like protein J4N37_19510 PF01625 Peptide methionine sulfoxide reductase J4N37_19510 PF01641 SelR domain J4N37_19525 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4N37_19530 PF00875 DNA photolyase J4N37_19530 PF03441 FAD binding domain of DNA photolyase J4N37_19535 PF00990 Diguanylate cyclase, GGDEF domain J4N37_19550 PF02743 Cache domain J4N37_19550 PF00672 HAMP domain J4N37_19550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_19555 PF00990 Diguanylate cyclase, GGDEF domain J4N37_19555 PF05230 MASE2 domain J4N37_19575 PF00483 Nucleotidyl transferase J4N37_19580 PF00483 Nucleotidyl transferase J4N37_19590 PF00175 Oxidoreductase NAD-binding domain J4N37_19590 PF00970 Oxidoreductase FAD-binding domain J4N37_19600 PF09905 DNA-binding protein VF530 J4N37_19605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_19605 PF03466 LysR substrate binding domain J4N37_19615 PF00881 Nitroreductase family J4N37_19625 PF00686 Starch binding domain J4N37_19625 PF00128 Alpha amylase, catalytic domain J4N37_19630 PF00768 D-alanyl-D-alanine carboxypeptidase J4N37_19630 PF07943 Penicillin-binding protein 5, C-terminal domain J4N37_19635 PF00561 alpha/beta hydrolase fold J4N37_19645 PF01809 Putative membrane protein insertion efficiency factor J4N37_19665 PF00268 Ribonucleotide reductase, small chain J4N37_19670 PF03477 ATP cone domain J4N37_19670 PF02867 Ribonucleotide reductase, barrel domain J4N37_19670 PF00317 Ribonucleotide reductase, all-alpha domain J4N37_19675 PF00581 Rhodanese-like domain J4N37_19675 PF17773 UPF0176 acylphosphatase like domain J4N37_19685 PF03441 FAD binding domain of DNA photolyase J4N37_19685 PF00875 DNA photolyase J4N37_19695 PF01734 Patatin-like phospholipase J4N37_19700 PF00672 HAMP domain J4N37_19700 PF02743 Cache domain J4N37_19700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_19705 PF01914 MarC family integral membrane protein J4N37_19710 PF00881 Nitroreductase family J4N37_19725 PF08803 Putative mono-oxygenase ydhR J4N37_19730 PF03466 LysR substrate binding domain J4N37_19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_19760 PF00375 Sodium:dicarboxylate symporter family J4N37_19770 PF06803 Protein of unknown function (DUF1232) J4N37_19775 PF07687 Peptidase dimerisation domain J4N37_19775 PF01546 Peptidase family M20/M25/M40 J4N37_19780 PF07670 Nucleoside recognition J4N37_19785 PF07670 Nucleoside recognition J4N37_19800 PF00128 Alpha amylase, catalytic domain J4N37_19805 PF00912 Transglycosylase J4N37_19810 PF00128 Alpha amylase, catalytic domain J4N37_19810 PF02806 Alpha amylase, C-terminal all-beta domain J4N37_19810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N37_19815 PF02446 4-alpha-glucanotransferase J4N37_19820 PF00343 Carbohydrate phosphorylase J4N37_19825 PF17874 MalT-like TPR region J4N37_19825 PF00196 Bacterial regulatory proteins, luxR family J4N37_19840 PF02630 SCO1/SenC J4N37_19850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N37_19850 PF02378 Phosphotransferase system, EIIC J4N37_19850 PF00367 phosphotransferase system, EIIB J4N37_19855 PF03193 RsgA GTPase J4N37_19860 PF00375 Sodium:dicarboxylate symporter family J4N37_19865 PF08543 Phosphomethylpyrimidine kinase J4N37_19875 PF13520 Amino acid permease J4N37_19880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J4N37_19880 PF01276 Orn/Lys/Arg decarboxylase, major domain J4N37_19880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4N37_19895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N37_19895 PF11852 Domain of unknown function (DUF3372) J4N37_19895 PF03714 Bacterial pullanase-associated domain J4N37_19895 PF18494 Pullulanase Ins domain J4N37_19895 PF17967 Pullulanase N2 domain J4N37_19900 PF04231 Endonuclease I J4N37_19905 PF02903 Alpha amylase, N-terminal ig-like domain J4N37_19905 PF00128 Alpha amylase, catalytic domain J4N37_19905 PF16657 Maltogenic Amylase, C-terminal domain J4N37_19920 PF02264 LamB porin J4N37_19925 PF00128 Alpha amylase, catalytic domain J4N37_19925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N37_19930 PF00990 Diguanylate cyclase, GGDEF domain J4N37_19940 PF03315 Serine dehydratase beta chain J4N37_19940 PF03313 Serine dehydratase alpha chain J4N37_19945 PF00474 Sodium:solute symporter family J4N37_19950 PF07690 Major Facilitator Superfamily J4N37_19965 PF00356 Bacterial regulatory proteins, lacI family J4N37_19970 PF02796 Helix-turn-helix domain of resolvase J4N37_19970 PF00239 Resolvase, N terminal domain J4N37_19975 PF07690 Major Facilitator Superfamily J4N37_19980 PF06224 Winged helix DNA-binding domain J4N37_19985 PF00892 EamA-like transporter family J4N37_19990 PF00593 TonB dependent receptor J4N37_19990 PF07715 TonB-dependent Receptor Plug Domain J4N37_19995 PF03466 LysR substrate binding domain J4N37_19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_20000 PF01497 Periplasmic binding protein J4N37_20005 PF01032 FecCD transport family J4N37_20010 PF01032 FecCD transport family J4N37_20015 PF00005 ABC transporter J4N37_20030 PF13533 Biotin-lipoyl like J4N37_20040 PF04225 Opacity-associated protein A LysM-like domain J4N37_20040 PF01551 Peptidase family M23 J4N37_20055 PF00675 Insulinase (Peptidase family M16) J4N37_20055 PF05193 Peptidase M16 inactive domain J4N37_20060 PF00672 HAMP domain J4N37_20060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_20065 PF00005 ABC transporter J4N37_20070 PF01032 FecCD transport family J4N37_20075 PF01032 FecCD transport family J4N37_20080 PF01497 Periplasmic binding protein J4N37_20085 PF07660 Secretin and TonB N terminus short domain J4N37_20085 PF00593 TonB dependent receptor J4N37_20085 PF07715 TonB-dependent Receptor Plug Domain J4N37_20090 PF07715 TonB-dependent Receptor Plug Domain J4N37_20090 PF00593 TonB dependent receptor J4N37_20095 PF00206 Lyase J4N37_20095 PF02655 ATP-grasp domain J4N37_20100 PF06276 Ferric iron reductase FhuF-like transporter J4N37_20100 PF04183 IucA / IucC family J4N37_20110 PF06276 Ferric iron reductase FhuF-like transporter J4N37_20110 PF04183 IucA / IucC family J4N37_20115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N37_20115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N37_20120 PF01136 Peptidase family U32 J4N37_20120 PF16325 Peptidase family U32 C-terminal domain J4N37_20140 PF01875 Memo-like protein J4N37_20150 PF00005 ABC transporter J4N37_20155 PF12704 MacB-like periplasmic core domain J4N37_20155 PF02687 FtsX-like permease family J4N37_20180 PF02566 OsmC-like protein J4N37_20185 PF01047 MarR family J4N37_20190 PF00578 AhpC/TSA family J4N37_20190 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N37_20195 PF13192 Thioredoxin domain J4N37_20195 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_20225 PF06445 GyrI-like small molecule binding domain J4N37_20230 PF01810 LysE type translocator J4N37_20235 PF01037 Lrp/AsnC ligand binding domain J4N37_20235 PF13404 AsnC-type helix-turn-helix domain J4N37_20250 PF03473 MOSC domain J4N37_20250 PF03475 3-alpha domain J4N37_20260 PF06629 MltA-interacting protein MipA J4N37_20265 PF00271 Helicase conserved C-terminal domain J4N37_20265 PF00270 DEAD/DEAH box helicase J4N37_20270 PF04542 Sigma-70 region 2 J4N37_20270 PF08281 Sigma-70, region 4 J4N37_20280 PF00155 Aminotransferase class I and II J4N37_20285 PF03786 D-mannonate dehydratase (UxuA) J4N37_20290 PF07729 FCD domain J4N37_20290 PF00392 Bacterial regulatory proteins, gntR family J4N37_20295 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N37_20300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N37_20305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N37_20310 PF08125 Mannitol dehydrogenase C-terminal domain J4N37_20310 PF01232 Mannitol dehydrogenase Rossmann domain J4N37_20315 PF02614 Glucuronate isomerase J4N37_20320 PF00294 pfkB family carbohydrate kinase J4N37_20325 PF01081 KDPG and KHG aldolase J4N37_20330 PF10688 Bacterial inner membrane protein J4N37_20345 PF00005 ABC transporter J4N37_20345 PF00664 ABC transporter transmembrane region J4N37_20350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4N37_20350 PF01243 Pyridoxamine 5'-phosphate oxidase J4N37_20355 PF00512 His Kinase A (phospho-acceptor) domain J4N37_20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_20355 PF02743 Cache domain J4N37_20360 PF00158 Sigma-54 interaction domain J4N37_20360 PF02954 Bacterial regulatory protein, Fis family J4N37_20360 PF00072 Response regulator receiver domain J4N37_20365 PF00529 HlyD membrane-fusion protein of T1SS J4N37_20380 PF00664 ABC transporter transmembrane region J4N37_20380 PF03412 Peptidase C39 family J4N37_20380 PF00005 ABC transporter J4N37_20390 PF03358 NADPH-dependent FMN reductase J4N37_20405 PF03466 LysR substrate binding domain J4N37_20405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_20410 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_20420 PF05127 Helicase J4N37_20420 PF13718 GNAT acetyltransferase 2 J4N37_20425 PF02195 ParB-like nuclease domain J4N37_20425 PF08775 ParB family J4N37_20430 PF13614 AAA domain J4N37_20430 PF18607 ParA helix turn helix domain J4N37_20445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_20445 PF00005 ABC transporter J4N37_20450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_20450 PF00005 ABC transporter J4N37_20460 PF08719 Domain of unknown function (DUF1768) J4N37_20460 PF00925 GTP cyclohydrolase II J4N37_20470 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N37_20470 PF00512 His Kinase A (phospho-acceptor) domain J4N37_20470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_20470 PF01627 Hpt domain J4N37_20470 PF00672 HAMP domain J4N37_20470 PF00072 Response regulator receiver domain J4N37_20480 PF01709 Transcriptional regulator J4N37_20485 PF01098 Cell cycle protein J4N37_20500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_20505 PF03466 LysR substrate binding domain J4N37_20505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_20515 PF00005 ABC transporter J4N37_20535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_20535 PF07694 5TMR of 5TMR-LYT J4N37_20535 PF13492 GAF domain J4N37_20535 PF06580 Histidine kinase J4N37_20540 PF04397 LytTr DNA-binding domain J4N37_20540 PF00072 Response regulator receiver domain J4N37_20550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N37_20555 PF00672 HAMP domain J4N37_20555 PF17200 Single Cache domain 2 J4N37_20555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_20570 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_20575 PF03616 Sodium/glutamate symporter J4N37_20590 PF00005 ABC transporter J4N37_20595 PF00392 Bacterial regulatory proteins, gntR family J4N37_20595 PF00155 Aminotransferase class I and II J4N37_20600 PF03616 Sodium/glutamate symporter J4N37_20610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N37_20625 PF03466 LysR substrate binding domain J4N37_20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_20635 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N37_20635 PF06029 AlkA N-terminal domain J4N37_20640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N37_20640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4N37_20650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N37_20660 PF03600 Citrate transporter J4N37_20680 PF08329 Chitinase A, N-terminal domain J4N37_20680 PF00704 Glycosyl hydrolases family 18 J4N37_20690 PF06865 Pyrimidine/purine nucleoside phosphorylase J4N37_20700 PF00990 Diguanylate cyclase, GGDEF domain J4N37_20700 PF00563 EAL domain J4N37_20710 PF00356 Bacterial regulatory proteins, lacI family J4N37_20720 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_20725 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_20730 PF00232 Glycosyl hydrolase family 1 J4N37_20735 PF17912 MalK OB fold domain J4N37_20735 PF00005 ABC transporter J4N37_20740 PF00356 Bacterial regulatory proteins, lacI family J4N37_20750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N37_20755 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_20760 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N37_20760 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_20765 PF00005 ABC transporter J4N37_20765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_20770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N37_20770 PF00005 ABC transporter J4N37_20780 PF00356 Bacterial regulatory proteins, lacI family J4N37_20795 PF12833 Helix-turn-helix domain J4N37_20800 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4N37_20800 PF14310 Fibronectin type III-like domain J4N37_20800 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N37_20805 PF01554 MatE J4N37_20820 PF12833 Helix-turn-helix domain J4N37_20825 PF01619 Proline dehydrogenase J4N37_20825 PF14850 DNA-binding domain of Proline dehydrogenase J4N37_20825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4N37_20825 PF00171 Aldehyde dehydrogenase family J4N37_20835 PF00474 Sodium:solute symporter family J4N37_20870 PF13302 Acetyltransferase (GNAT) domain J4N37_20875 PF00300 Histidine phosphatase superfamily (branch 1) J4N37_20890 PF01037 Lrp/AsnC ligand binding domain J4N37_20895 PF00849 RNA pseudouridylate synthase J4N37_20910 PF00990 Diguanylate cyclase, GGDEF domain J4N37_20910 PF03707 Bacterial signalling protein N terminal repeat J4N37_20910 PF00563 EAL domain J4N37_20920 PF05656 Protein of unknown function (DUF805) J4N37_20930 PF00756 Putative esterase J4N37_20935 PF00107 Zinc-binding dehydrogenase J4N37_20935 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_20940 PF00797 N-acetyltransferase J4N37_20950 PF03466 LysR substrate binding domain J4N37_20950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_20955 PF08021 Siderophore-interacting FAD-binding domain J4N37_20955 PF04954 Siderophore-interacting protein J4N37_20960 PF00326 Prolyl oligopeptidase family J4N37_20965 PF01810 LysE type translocator J4N37_20970 PF01037 Lrp/AsnC ligand binding domain J4N37_20975 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4N37_20975 PF18416 N-acetylglucosamine binding protein domain 2 J4N37_20985 PF00893 Small Multidrug Resistance protein J4N37_21000 PF13599 Pentapeptide repeats (9 copies) J4N37_21005 PF03922 OmpW family J4N37_21010 PF16868 NMT1-like family J4N37_21020 PF13533 Biotin-lipoyl like J4N37_21025 PF07690 Major Facilitator Superfamily J4N37_21040 PF01204 Trehalase J4N37_21060 PF01810 LysE type translocator J4N37_21065 PF03974 Ecotin J4N37_21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21085 PF03466 LysR substrate binding domain J4N37_21095 PF13419 Haloacid dehalogenase-like hydrolase J4N37_21120 PF02595 Glycerate kinase family J4N37_21125 PF00392 Bacterial regulatory proteins, gntR family J4N37_21125 PF00155 Aminotransferase class I and II J4N37_21170 PF00583 Acetyltransferase (GNAT) family J4N37_21200 PF01569 PAP2 superfamily J4N37_21205 PF02581 Thiamine monophosphate synthase J4N37_21210 PF02110 Hydroxyethylthiazole kinase family J4N37_21215 PF03070 TENA/THI-4/PQQC family J4N37_21220 PF09084 NMT1/THI5 like J4N37_21225 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_21230 PF00005 ABC transporter J4N37_21235 PF08543 Phosphomethylpyrimidine kinase J4N37_21240 PF01523 Putative modulator of DNA gyrase J4N37_21245 PF01523 Putative modulator of DNA gyrase J4N37_21250 PF04013 Putative SAM-dependent RNA methyltransferase J4N37_21300 PF10928 Protein of unknown function (DUF2810) J4N37_21305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N37_21305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N37_21315 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N37_21320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N37_21320 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N37_21325 PF00072 Response regulator receiver domain J4N37_21325 PF00486 Transcriptional regulatory protein, C terminal J4N37_21330 PF16750 Sensor domain of 2-component histidine kinase J4N37_21330 PF00512 His Kinase A (phospho-acceptor) domain J4N37_21330 PF00672 HAMP domain J4N37_21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_21335 PF07715 TonB-dependent Receptor Plug Domain J4N37_21335 PF00593 TonB dependent receptor J4N37_21345 PF01618 MotA/TolQ/ExbB proton channel family J4N37_21350 PF01618 MotA/TolQ/ExbB proton channel family J4N37_21355 PF02472 Biopolymer transport protein ExbD/TolR J4N37_21400 PF01297 Zinc-uptake complex component A periplasmic J4N37_21405 PF00005 ABC transporter J4N37_21410 PF00950 ABC 3 transport family J4N37_21425 PF00326 Prolyl oligopeptidase family J4N37_21425 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N37_21430 PF07690 Major Facilitator Superfamily J4N37_21435 PF00491 Arginase family J4N37_21440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N37_21440 PF17944 Arginine decarboxylase C-terminal helical extension J4N37_21440 PF17810 Arginine decarboxylase helical bundle domain J4N37_21445 PF00753 Metallo-beta-lactamase superfamily J4N37_21450 PF08443 RimK-like ATP-grasp domain J4N37_21450 PF18030 RimK PreATP-grasp domain J4N37_21455 PF18030 RimK PreATP-grasp domain J4N37_21455 PF08443 RimK-like ATP-grasp domain J4N37_21465 PF12706 Beta-lactamase superfamily domain J4N37_21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21475 PF03466 LysR substrate binding domain J4N37_21500 PF00232 Glycosyl hydrolase family 1 J4N37_21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_21510 PF00512 His Kinase A (phospho-acceptor) domain J4N37_21515 PF02954 Bacterial regulatory protein, Fis family J4N37_21515 PF00158 Sigma-54 interaction domain J4N37_21515 PF00072 Response regulator receiver domain J4N37_21520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_21520 PF00672 HAMP domain J4N37_21520 PF02743 Cache domain J4N37_21530 PF05525 Branched-chain amino acid transport protein J4N37_21545 PF01266 FAD dependent oxidoreductase J4N37_21550 PF00182 Chitinase class I J4N37_21565 PF03116 NQR2, RnfD, RnfE family J4N37_21570 PF01212 Beta-eliminating lyase J4N37_21585 PF01773 Na+ dependent nucleoside transporter N-terminus J4N37_21585 PF07662 Na+ dependent nucleoside transporter C-terminus J4N37_21585 PF07670 Nucleoside recognition J4N37_21590 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N37_21595 PF01594 AI-2E family transporter J4N37_21605 PF13533 Biotin-lipoyl like J4N37_21625 PF00892 EamA-like transporter family J4N37_21635 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N37_21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21645 PF03466 LysR substrate binding domain J4N37_21650 PF07690 Major Facilitator Superfamily J4N37_21660 PF00583 Acetyltransferase (GNAT) family J4N37_21675 PF00990 Diguanylate cyclase, GGDEF domain J4N37_21675 PF08448 PAS fold J4N37_21680 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N37_21685 PF04055 Radical SAM superfamily J4N37_21690 PF01228 Glycine radical J4N37_21690 PF02901 Pyruvate formate lyase-like J4N37_21700 PF01638 HxlR-like helix-turn-helix J4N37_21705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_21705 PF08447 PAS fold J4N37_21710 PF12833 Helix-turn-helix domain J4N37_21710 PF12852 Cupin J4N37_21715 PF00561 alpha/beta hydrolase fold J4N37_21735 PF02567 Phenazine biosynthesis-like protein J4N37_21740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_21745 PF12848 ABC transporter J4N37_21745 PF00005 ABC transporter J4N37_21750 PF09905 DNA-binding protein VF530 J4N37_21755 PF03466 LysR substrate binding domain J4N37_21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21760 PF03358 NADPH-dependent FMN reductase J4N37_21765 PF13409 Glutathione S-transferase, N-terminal domain J4N37_21770 PF00005 ABC transporter J4N37_21770 PF12848 ABC transporter J4N37_21785 PF03466 LysR substrate binding domain J4N37_21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21795 PF13977 BetI-type transcriptional repressor, C-terminal J4N37_21795 PF00440 Bacterial regulatory proteins, tetR family J4N37_21815 PF00581 Rhodanese-like domain J4N37_21820 PF01810 LysE type translocator J4N37_21825 PF03466 LysR substrate binding domain J4N37_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21835 PF12833 Helix-turn-helix domain J4N37_21840 PF11806 Domain of unknown function (DUF3327) J4N37_21840 PF00756 Putative esterase J4N37_21845 PF07715 TonB-dependent Receptor Plug Domain J4N37_21845 PF00593 TonB dependent receptor J4N37_21850 PF12833 Helix-turn-helix domain J4N37_21855 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J4N37_21860 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J4N37_21865 PF13520 Amino acid permease J4N37_21870 PF03060 Nitronate monooxygenase J4N37_21885 PF01625 Peptide methionine sulfoxide reductase J4N37_21885 PF01641 SelR domain J4N37_21890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N37_21895 PF00455 DeoR C terminal sensor domain J4N37_21895 PF08220 DeoR-like helix-turn-helix domain J4N37_21915 PF00857 Isochorismatase family J4N37_21925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4N37_21925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4N37_21935 PF06942 GlpM protein J4N37_21965 PF03466 LysR substrate binding domain J4N37_21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_21990 PF00571 CBS domain J4N37_21990 PF00005 ABC transporter J4N37_21995 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_22005 PF02001 Protein of unknown function DUF134 J4N37_22025 PF12464 Maltose acetyltransferase J4N37_22025 PF14602 Hexapeptide repeat of succinyl-transferase J4N37_22025 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_22035 PF03764 Elongation factor G, domain IV J4N37_22035 PF00009 Elongation factor Tu GTP binding domain J4N37_22035 PF03144 Elongation factor Tu domain 2 J4N37_22035 PF00679 Elongation factor G C-terminus J4N37_22035 PF14492 Elongation Factor G, domain II J4N37_22040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N37_22040 PF13378 Enolase C-terminal domain-like J4N37_22050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22050 PF03466 LysR substrate binding domain J4N37_22060 PF00376 MerR family regulatory protein J4N37_22060 PF09278 MerR, DNA binding J4N37_22080 PF00486 Transcriptional regulatory protein, C terminal J4N37_22080 PF18500 CadC C-terminal domain 1 J4N37_22130 PF13091 PLD-like domain J4N37_22135 PF13533 Biotin-lipoyl like J4N37_22140 PF00873 AcrB/AcrD/AcrF family J4N37_22155 PF00873 AcrB/AcrD/AcrF family J4N37_22195 PF00501 AMP-binding enzyme J4N37_22195 PF13193 AMP-binding enzyme C-terminal domain J4N37_22200 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_22205 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4N37_22205 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J4N37_22205 PF00703 Glycosyl hydrolases family 2 J4N37_22205 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4N37_22215 PF00563 EAL domain J4N37_22215 PF00990 Diguanylate cyclase, GGDEF domain J4N37_22215 PF03707 Bacterial signalling protein N terminal repeat J4N37_22225 PF03616 Sodium/glutamate symporter J4N37_22230 PF02321 Outer membrane efflux protein J4N37_22235 PF00873 AcrB/AcrD/AcrF family J4N37_22240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_22245 PF03466 LysR substrate binding domain J4N37_22245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22260 PF00579 tRNA synthetases class I (W and Y) J4N37_22265 PF00196 Bacterial regulatory proteins, luxR family J4N37_22265 PF00072 Response regulator receiver domain J4N37_22275 PF02371 Transposase IS116/IS110/IS902 family J4N37_22275 PF01548 Transposase J4N37_22280 PF00391 PEP-utilising enzyme, mobile domain J4N37_22280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4N37_22280 PF02896 PEP-utilising enzyme, TIM barrel domain J4N37_22285 PF03618 Kinase/pyrophosphorylase J4N37_22290 PF03707 Bacterial signalling protein N terminal repeat J4N37_22290 PF00990 Diguanylate cyclase, GGDEF domain J4N37_22290 PF00563 EAL domain J4N37_22295 PF00709 Adenylosuccinate synthetase J4N37_22300 PF03466 LysR substrate binding domain J4N37_22300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22325 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4N37_22340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N37_22350 PF07690 Major Facilitator Superfamily J4N37_22360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22360 PF03466 LysR substrate binding domain J4N37_22380 PF03466 LysR substrate binding domain J4N37_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22390 PF03466 LysR substrate binding domain J4N37_22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22400 PF00270 DEAD/DEAH box helicase J4N37_22400 PF00271 Helicase conserved C-terminal domain J4N37_22415 PF00535 Glycosyl transferase family 2 J4N37_22425 PF03099 Biotin/lipoate A/B protein ligase family J4N37_22440 PF00155 Aminotransferase class I and II J4N37_22445 PF01497 Periplasmic binding protein J4N37_22445 PF12833 Helix-turn-helix domain J4N37_22450 PF03466 LysR substrate binding domain J4N37_22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22460 PF00106 short chain dehydrogenase J4N37_22520 PF01872 RibD C-terminal domain J4N37_22525 PF02909 Tetracyclin repressor-like, C-terminal domain J4N37_22525 PF00440 Bacterial regulatory proteins, tetR family J4N37_22530 PF02798 Glutathione S-transferase, N-terminal domain J4N37_22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22535 PF03466 LysR substrate binding domain J4N37_22540 PF02525 Flavodoxin-like fold J4N37_22545 PF02028 BCCT, betaine/carnitine/choline family transporter J4N37_22550 PF07943 Penicillin-binding protein 5, C-terminal domain J4N37_22550 PF00768 D-alanyl-D-alanine carboxypeptidase J4N37_22555 PF00990 Diguanylate cyclase, GGDEF domain J4N37_22555 PF17158 Membrane-associated sensor, integral membrane domain J4N37_22565 PF08241 Methyltransferase domain J4N37_22570 PF08534 Redoxin J4N37_22570 PF00462 Glutaredoxin J4N37_22590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22590 PF03466 LysR substrate binding domain J4N37_22595 PF00990 Diguanylate cyclase, GGDEF domain J4N37_22595 PF08448 PAS fold J4N37_22600 PF00962 Adenosine/AMP deaminase J4N37_22615 PF00313 'Cold-shock' DNA-binding domain J4N37_22620 PF02678 Pirin J4N37_22620 PF05726 Pirin C-terminal cupin domain J4N37_22625 PF01734 Patatin-like phospholipase J4N37_22635 PF01979 Amidohydrolase family J4N37_22640 PF00132 Bacterial transferase hexapeptide (six repeats) J4N37_22645 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N37_22645 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N37_22665 PF01047 MarR family J4N37_22685 PF00005 ABC transporter J4N37_22685 PF17912 MalK OB fold domain J4N37_22690 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_22695 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_22700 PF13416 Bacterial extracellular solute-binding protein J4N37_22705 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N37_22710 PF08220 DeoR-like helix-turn-helix domain J4N37_22710 PF00455 DeoR C terminal sensor domain J4N37_22720 PF00582 Universal stress protein family J4N37_22740 PF01980 tRNA-methyltransferase O J4N37_22745 PF00005 ABC transporter J4N37_22745 PF16326 ABC transporter C-terminal domain J4N37_22745 PF12848 ABC transporter J4N37_22750 PF00326 Prolyl oligopeptidase family J4N37_22750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N37_22755 PF13302 Acetyltransferase (GNAT) domain J4N37_22765 PF14376 Haem-binding domain J4N37_22765 PF03150 Di-haem cytochrome c peroxidase J4N37_22765 PF00034 Cytochrome c J4N37_22780 PF00293 NUDIX domain J4N37_22795 PF13673 Acetyltransferase (GNAT) domain J4N37_22795 PF00583 Acetyltransferase (GNAT) family J4N37_22800 PF00698 Acyl transferase domain J4N37_22800 PF08240 Alcohol dehydrogenase GroES-like domain J4N37_22800 PF16197 Ketoacyl-synthetase C-terminal extension J4N37_22800 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N37_22800 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N37_22800 PF08659 KR domain J4N37_22800 PF00550 Phosphopantetheine attachment site J4N37_22800 PF14765 Polyketide synthase dehydratase J4N37_22840 PF00873 AcrB/AcrD/AcrF family J4N37_22845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_22860 PF12838 4Fe-4S dicluster domain J4N37_22860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N37_22860 PF00384 Molybdopterin oxidoreductase J4N37_22860 PF01568 Molydopterin dinucleotide binding domain J4N37_22860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4N37_22880 PF00005 ABC transporter J4N37_22890 PF00672 HAMP domain J4N37_22890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_22905 PF13419 Haloacid dehalogenase-like hydrolase J4N37_22910 PF01590 GAF domain J4N37_22910 PF00158 Sigma-54 interaction domain J4N37_22915 PF00258 Flavodoxin J4N37_22915 PF00301 Rubredoxin J4N37_22915 PF00753 Metallo-beta-lactamase superfamily J4N37_22920 PF18113 Rubredoxin binding C-terminal domain J4N37_22920 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_22935 PF01238 Phosphomannose isomerase type I J4N37_22940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N37_22940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N37_22945 PF12833 Helix-turn-helix domain J4N37_22955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N37_22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_22965 PF03466 LysR substrate binding domain J4N37_22975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N37_22975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N37_22980 PF06628 Catalase-related immune-responsive J4N37_22980 PF00199 Catalase J4N37_22990 PF16884 N-terminal domain of oxidoreductase J4N37_22990 PF00107 Zinc-binding dehydrogenase J4N37_22995 PF16925 Tetracyclin repressor-like, C-terminal domain J4N37_22995 PF00440 Bacterial regulatory proteins, tetR family J4N37_23000 PF04266 ASCH domain J4N37_23025 PF00534 Glycosyl transferases group 1 J4N37_23025 PF13439 Glycosyltransferase Family 4 J4N37_23030 PF02706 Chain length determinant protein J4N37_23030 PF13807 G-rich domain on putative tyrosine kinase J4N37_23030 PF13614 AAA domain J4N37_23045 PF02397 Bacterial sugar transferase J4N37_23050 PF00005 ABC transporter J4N37_23050 PF08402 TOBE domain J4N37_23055 PF01547 Bacterial extracellular solute-binding protein J4N37_23060 PF14785 Maltose transport system permease protein MalF P2 domain J4N37_23060 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_23065 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_23095 PF05661 Protein of unknown function (DUF808) J4N37_23100 PF01979 Amidohydrolase family J4N37_23105 PF01679 Proteolipid membrane potential modulator J4N37_23110 PF03473 MOSC domain J4N37_23110 PF03476 MOSC N-terminal beta barrel domain J4N37_23110 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_23110 PF03473 MOSC domain J4N37_23110 PF03476 MOSC N-terminal beta barrel domain J4N37_23110 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N37_23115 PF02540 NAD synthase J4N37_23120 PF01467 Cytidylyltransferase-like J4N37_23160 PF00005 ABC transporter J4N37_23165 PF01032 FecCD transport family J4N37_23175 PF02472 Biopolymer transport protein ExbD/TolR J4N37_23180 PF01618 MotA/TolQ/ExbB proton channel family J4N37_23185 PF03544 Gram-negative bacterial TonB protein C-terminal J4N37_23190 PF04055 Radical SAM superfamily J4N37_23195 PF06228 Haem utilisation ChuX/HutX J4N37_23200 PF01243 Pyridoxamine 5'-phosphate oxidase J4N37_23215 PF00072 Response regulator receiver domain J4N37_23215 PF01584 CheW-like domain J4N37_23225 PF00128 Alpha amylase, catalytic domain J4N37_23230 PF00672 HAMP domain J4N37_23230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_23235 PF03222 Tryptophan/tyrosine permease family J4N37_23240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_23240 PF00672 HAMP domain J4N37_23240 PF02743 Cache domain J4N37_23245 PF07670 Nucleoside recognition J4N37_23265 PF01551 Peptidase family M23 J4N37_23265 PF01476 LysM domain J4N37_23265 PF08525 Opacity-associated protein A N-terminal motif J4N37_23270 PF08447 PAS fold J4N37_23270 PF08448 PAS fold J4N37_23270 PF00563 EAL domain J4N37_23270 PF00990 Diguanylate cyclase, GGDEF domain J4N37_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_23275 PF03466 LysR substrate binding domain J4N37_23280 PF07690 Major Facilitator Superfamily J4N37_23290 PF00462 Glutaredoxin J4N37_23295 PF00892 EamA-like transporter family J4N37_23300 PF13609 Gram-negative porin J4N37_23310 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4N37_23330 PF01810 LysE type translocator J4N37_23340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N37_23340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N37_23340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N37_23340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N37_23345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N37_23345 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4N37_23350 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N37_23355 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4N37_23360 PF00510 Cytochrome c oxidase subunit III J4N37_23380 PF02628 Cytochrome oxidase assembly protein J4N37_23385 PF01040 UbiA prenyltransferase family J4N37_23390 PF01389 OmpA-like transmembrane domain J4N37_23390 PF00691 OmpA family J4N37_23395 PF00793 DAHP synthetase I family J4N37_23400 PF07690 Major Facilitator Superfamily J4N37_23405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_23405 PF08447 PAS fold J4N37_23410 PF02779 Transketolase, pyrimidine binding domain J4N37_23410 PF02780 Transketolase, C-terminal domain J4N37_23410 PF00456 Transketolase, thiamine diphosphate binding domain J4N37_23415 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N37_23425 PF08329 Chitinase A, N-terminal domain J4N37_23425 PF00704 Glycosyl hydrolases family 18 J4N37_23430 PF03707 Bacterial signalling protein N terminal repeat J4N37_23430 PF00990 Diguanylate cyclase, GGDEF domain J4N37_23430 PF00563 EAL domain J4N37_23435 PF00581 Rhodanese-like domain J4N37_23450 PF00899 ThiF family J4N37_23455 PF00994 Probable molybdopterin binding domain J4N37_23455 PF03453 MoeA N-terminal region (domain I and II) J4N37_23455 PF03454 MoeA C-terminal region (domain IV) J4N37_23460 PF01227 GTP cyclohydrolase I J4N37_23465 PF01566 Natural resistance-associated macrophage protein J4N37_23475 PF00654 Voltage gated chloride channel J4N37_23490 PF00248 Aldo/keto reductase family J4N37_23505 PF01546 Peptidase family M20/M25/M40 J4N37_23505 PF07687 Peptidase dimerisation domain J4N37_23510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N37_23515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_23520 PF00873 AcrB/AcrD/AcrF family J4N37_23525 PF17200 Single Cache domain 2 J4N37_23525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_23525 PF00672 HAMP domain J4N37_23530 PF00472 RF-1 domain J4N37_23535 PF13419 Haloacid dehalogenase-like hydrolase J4N37_23540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N37_23540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N37_23550 PF00691 OmpA family J4N37_23570 PF00313 'Cold-shock' DNA-binding domain J4N37_23575 PF03889 Alternative ribosome-rescue factor A J4N37_23585 PF00990 Diguanylate cyclase, GGDEF domain J4N37_23600 PF00005 ABC transporter J4N37_23600 PF02687 FtsX-like permease family J4N37_23600 PF12704 MacB-like periplasmic core domain J4N37_23605 PF00005 ABC transporter J4N37_23605 PF02687 FtsX-like permease family J4N37_23605 PF12704 MacB-like periplasmic core domain J4N37_23615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_23615 PF00672 HAMP domain J4N37_23620 PF00210 Ferritin-like domain J4N37_23640 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_23650 PF05947 Type VI secretion system, TssF J4N37_23670 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N37_23680 PF17871 AAA lid domain J4N37_23680 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_23680 PF07724 AAA domain (Cdc48 subfamily) J4N37_23680 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_23685 PF00158 Sigma-54 interaction domain J4N37_23685 PF02954 Bacterial regulatory protein, Fis family J4N37_23700 PF06761 Intracellular multiplication and human macrophage-killing J4N37_23700 PF06744 Type VI secretion protein IcmF C-terminal J4N37_23700 PF14331 ImcF-related N-terminal domain J4N37_23740 PF05638 Type VI secretion system effector, Hcp J4N37_23745 PF04717 Type VI secretion system, phage-baseplate injector J4N37_23830 PF00005 ABC transporter J4N37_23830 PF00664 ABC transporter transmembrane region J4N37_23835 PF00529 HlyD membrane-fusion protein of T1SS J4N37_23835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_23850 PF13426 PAS domain J4N37_23850 PF07228 Stage II sporulation protein E (SpoIIE) J4N37_23855 PF01740 STAS domain J4N37_23860 PF00483 Nucleotidyl transferase J4N37_23895 PF00722 Glycosyl hydrolases family 16 J4N37_23940 PF00293 NUDIX domain J4N37_23945 PF01177 Asp/Glu/Hydantoin racemase J4N37_23955 PF01048 Phosphorylase superfamily J4N37_23960 PF00563 EAL domain J4N37_23960 PF00990 Diguanylate cyclase, GGDEF domain J4N37_23965 PF05025 RbsD / FucU transport protein family J4N37_23970 PF00005 ABC transporter J4N37_23975 PF02653 Branched-chain amino acid transport system / permease component J4N37_23980 PF13407 Periplasmic binding protein domain J4N37_23985 PF00294 pfkB family carbohydrate kinase J4N37_23990 PF00356 Bacterial regulatory proteins, lacI family J4N37_23995 PF01048 Phosphorylase superfamily J4N37_24010 PF01497 Periplasmic binding protein J4N37_24015 PF01032 FecCD transport family J4N37_24020 PF01032 FecCD transport family J4N37_24025 PF00005 ABC transporter J4N37_24030 PF13411 MerR HTH family regulatory protein J4N37_24035 PF02311 AraC-like ligand binding domain J4N37_24035 PF12833 Helix-turn-helix domain J4N37_24040 PF00593 TonB dependent receptor J4N37_24040 PF07715 TonB-dependent Receptor Plug Domain J4N37_24050 PF17803 Bacterial cadherin-like domain J4N37_24065 PF12805 FUSC-like inner membrane protein yccS J4N37_24070 PF00580 UvrD/REP helicase N-terminal domain J4N37_24070 PF12462 DNA helicase IV / RNA helicase N terminal J4N37_24070 PF13361 UvrD-like helicase C-terminal domain J4N37_24075 PF02142 MGS-like domain J4N37_24080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N37_24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_24085 PF00072 Response regulator receiver domain J4N37_24085 PF00512 His Kinase A (phospho-acceptor) domain J4N37_24085 PF01627 Hpt domain J4N37_24085 PF00672 HAMP domain J4N37_24105 PF00069 Protein kinase domain J4N37_24105 PF03781 Sulfatase-modifying factor enzyme 1 J4N37_24115 PF00245 Alkaline phosphatase J4N37_24125 PF00082 Subtilase family J4N37_24125 PF01483 Proprotein convertase P-domain J4N37_24135 PF00990 Diguanylate cyclase, GGDEF domain J4N37_24145 PF03222 Tryptophan/tyrosine permease family J4N37_24150 PF08448 PAS fold J4N37_24150 PF00990 Diguanylate cyclase, GGDEF domain J4N37_24150 PF00563 EAL domain J4N37_24160 PF01568 Molydopterin dinucleotide binding domain J4N37_24160 PF00384 Molybdopterin oxidoreductase J4N37_24160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N37_24165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N37_24165 PF14824 Sirohaem biosynthesis protein central J4N37_24165 PF10414 Sirohaem synthase dimerisation region J4N37_24170 PF02885 Glycosyl transferase family, helical bundle domain J4N37_24170 PF00591 Glycosyl transferase family, a/b domain J4N37_24175 PF01738 Dienelactone hydrolase family J4N37_24180 PF03861 ANTAR domain J4N37_24180 PF00072 Response regulator receiver domain J4N37_24185 PF00005 ABC transporter J4N37_24190 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_24195 PF00005 ABC transporter J4N37_24200 PF04324 BFD-like [2Fe-2S] binding domain J4N37_24200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N37_24200 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N37_24200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N37_24200 PF13806 Rieske-like [2Fe-2S] domain J4N37_24200 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_24230 PF00072 Response regulator receiver domain J4N37_24230 PF00211 Adenylate and Guanylate cyclase catalytic domain J4N37_24255 PF00069 Protein kinase domain J4N37_24255 PF03793 PASTA domain J4N37_24270 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N37_24275 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N37_24275 PF00691 OmpA family J4N37_24280 PF06761 Intracellular multiplication and human macrophage-killing J4N37_24280 PF14331 ImcF-related N-terminal domain J4N37_24280 PF06744 Type VI secretion protein IcmF C-terminal J4N37_24300 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J4N37_24305 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_24310 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N37_24325 PF05947 Type VI secretion system, TssF J4N37_24335 PF17871 AAA lid domain J4N37_24335 PF10431 C-terminal, D2-small domain, of ClpB protein J4N37_24335 PF00004 ATPase family associated with various cellular activities (AAA) J4N37_24335 PF07724 AAA domain (Cdc48 subfamily) J4N37_24345 PF04717 Type VI secretion system, phage-baseplate injector J4N37_24345 PF06715 Gp5 C-terminal repeat (3 copies) J4N37_24360 PF12320 Type 5 capsule protein repressor C-terminal domain J4N37_24360 PF00149 Calcineurin-like phosphoesterase J4N37_24365 PF13476 AAA domain J4N37_24375 PF00704 Glycosyl hydrolases family 18 J4N37_24405 PF08212 Lipocalin-like domain J4N37_24415 PF07690 Major Facilitator Superfamily J4N37_24425 PF03606 C4-dicarboxylate anaerobic carrier J4N37_24430 PF00034 Cytochrome c J4N37_24435 PF01212 Beta-eliminating lyase J4N37_24445 PF07728 AAA domain (dynein-related subfamily) J4N37_24445 PF17868 AAA lid domain J4N37_24445 PF12592 Protein of unknown function (DUF3763) J4N37_24450 PF05762 VWA domain containing CoxE-like protein J4N37_24465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N37_24465 PF03466 LysR substrate binding domain J4N37_24470 PF01565 FAD binding domain J4N37_24470 PF09330 D-lactate dehydrogenase, membrane binding J4N37_24480 PF13462 Thioredoxin J4N37_24500 PF09154 Domain of unknown function (DUF1939) J4N37_24500 PF00128 Alpha amylase, catalytic domain J4N37_24515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_24515 PF00672 HAMP domain J4N37_24515 PF02743 Cache domain J4N37_24545 PF08218 Citrate lyase ligase C-terminal domain J4N37_24545 PF00583 Acetyltransferase (GNAT) family J4N37_24560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_24560 PF00672 HAMP domain J4N37_24565 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N37_24565 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_24565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N37_24565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N37_24565 PF04324 BFD-like [2Fe-2S] binding domain J4N37_24570 PF13806 Rieske-like [2Fe-2S] domain J4N37_24575 PF01226 Formate/nitrite transporter J4N37_24580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N37_24580 PF10414 Sirohaem synthase dimerisation region J4N37_24580 PF14824 Sirohaem biosynthesis protein central J4N37_24595 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N37_24600 PF00672 HAMP domain J4N37_24600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N37_24600 PF17200 Single Cache domain 2 J4N37_24610 PF00593 TonB dependent receptor J4N37_24610 PF07715 TonB-dependent Receptor Plug Domain J4N37_24625 PF11756 Nitrous oxide-stimulated promoter J4N37_24630 PF07690 Major Facilitator Superfamily J4N37_24635 PF00085 Thioredoxin J4N37_24640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N37_24640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N37_24665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N37_24665 PF00529 HlyD membrane-fusion protein of T1SS J4N37_24675 PF01594 AI-2E family transporter J4N37_24685 PF01238 Phosphomannose isomerase type I J4N37_24690 PF07690 Major Facilitator Superfamily J4N37_24695 PF05231 MASE1 J4N37_24695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N37_24695 PF07730 Histidine kinase J4N37_24700 PF00072 Response regulator receiver domain J4N37_24700 PF00196 Bacterial regulatory proteins, luxR family J4N37_24705 PF07690 Major Facilitator Superfamily J4N37_24735 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N37_24735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N37_24745 PF04143 Sulphur transport J4N37_24760 PF03477 ATP cone domain J4N37_24760 PF13597 Anaerobic ribonucleoside-triphosphate reductase J4N37_24770 PF01554 MatE J4N37_24775 PF12833 Helix-turn-helix domain J4N37_24780 PF00155 Aminotransferase class I and II J4N37_24785 PF18030 RimK PreATP-grasp domain J4N37_24785 PF08443 RimK-like ATP-grasp domain J4N37_24795 PF04076 Bacterial OB fold (BOF) protein J4N37_24800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N37_24800 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4N37_24810 PF00528 Binding-protein-dependent transport system inner membrane component J4N37_24815 PF03459 TOBE domain J4N37_24815 PF00005 ABC transporter J4N37_24825 PF00360 Phytochrome region J4N37_24825 PF00990 Diguanylate cyclase, GGDEF domain J4N37_24825 PF01590 GAF domain J4N37_24825 PF00563 EAL domain J4N37_24840 PF00990 Diguanylate cyclase, GGDEF domain J4N37_24855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N37_24855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N37_24855 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4N37_24860 PF02233 NAD(P) transhydrogenase beta subunit J4N37_24870 PF00072 Response regulator receiver domain J4N37_24870 PF00486 Transcriptional regulatory protein, C terminal J4N37_24885 PF03701 Uncharacterised protein family (UPF0181) J4N37_24890 PF01575 MaoC like domain J4N37_24925 PF00263 Bacterial type II and III secretion system protein J4N37_24925 PF03958 Bacterial type II/III secretion system short domain