locus-tag class description FIV01_00005 PF11638 DnaA N-terminal domain FIV01_00005 PF08299 Bacterial dnaA protein helix-turn-helix FIV01_00005 PF00308 Bacterial dnaA protein FIV01_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FIV01_00010 PF02767 DNA polymerase III beta subunit, central domain FIV01_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FIV01_00015 PF02463 RecF/RecN/SMC N terminal domain FIV01_00020 PF00204 DNA gyrase B FIV01_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_00020 PF00986 DNA gyrase B subunit, carboxyl terminus FIV01_00020 PF01751 Toprim domain FIV01_00020 PF18053 DNA gyrase B subunit insert domain FIV01_00025 PF02719 Polysaccharide biosynthesis protein FIV01_00030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV01_00035 PF00551 Formyl transferase FIV01_00035 PF02911 Formyl transferase, C-terminal domain FIV01_00045 PF03102 NeuB family FIV01_00045 PF08666 SAF domain FIV01_00050 PF02348 Cytidylyltransferase FIV01_00055 PF00483 Nucleotidyl transferase FIV01_00065 PF01467 Cytidylyltransferase-like FIV01_00075 PF00550 Phosphopantetheine attachment site FIV01_00080 PF00501 AMP-binding enzyme FIV01_00080 PF13193 AMP-binding enzyme C-terminal domain FIV01_00085 PF00465 Iron-containing alcohol dehydrogenase FIV01_00100 PF09940 Domain of unknown function (DUF2172) FIV01_00100 PF16221 winged helix-turn-helix FIV01_00100 PF16254 Domain of unknown function (DUF4910) FIV01_00105 PF02719 Polysaccharide biosynthesis protein FIV01_00110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV01_00115 PF02348 Cytidylyltransferase FIV01_00125 PF08666 SAF domain FIV01_00125 PF03102 NeuB family FIV01_00140 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FIV01_00150 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FIV01_00160 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FIV01_00160 PF00535 Glycosyl transferase family 2 FIV01_00180 PF00011 Hsp20/alpha crystallin family FIV01_00185 PF00155 Aminotransferase class I and II FIV01_00190 PF05746 DALR anticodon binding domain FIV01_00190 PF02092 Glycyl-tRNA synthetase beta subunit FIV01_00195 PF02091 Glycyl-tRNA synthetase alpha subunit FIV01_00200 PF01169 Uncharacterized protein family UPF0016 FIV01_00210 PF01206 Sulfurtransferase TusA FIV01_00220 PF00107 Zinc-binding dehydrogenase FIV01_00220 PF08240 Alcohol dehydrogenase GroES-like domain FIV01_00225 PF00585 C-terminal regulatory domain of Threonine dehydratase FIV01_00225 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_00230 PF00920 Dehydratase family FIV01_00235 PF01063 Amino-transferase class IV FIV01_00245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV01_00245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV01_00245 PF00205 Thiamine pyrophosphate enzyme, central domain FIV01_00250 PF01078 Magnesium chelatase, subunit ChlI FIV01_00250 PF13335 Magnesium chelatase, subunit ChlI C-terminal FIV01_00260 PF01553 Acyltransferase FIV01_00265 PF01323 DSBA-like thioredoxin domain FIV01_00270 PF01636 Phosphotransferase enzyme family FIV01_00275 PF13746 4Fe-4S dicluster domain FIV01_00275 PF12801 4Fe-4S binding domain FIV01_00275 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FIV01_00280 PF06288 Protein of unknown function (DUF1040) FIV01_00285 PF07070 SpoOM protein FIV01_00290 PF03006 Haemolysin-III related FIV01_00300 PF02386 Cation transport protein FIV01_00305 PF02254 TrkA-N domain FIV01_00305 PF02080 TrkA-C domain FIV01_00310 PF01029 NusB family FIV01_00310 PF01189 16S rRNA methyltransferase RsmB/F FIV01_00315 PF00551 Formyl transferase FIV01_00315 PF02911 Formyl transferase, C-terminal domain FIV01_00320 PF01327 Polypeptide deformylase FIV01_00325 PF02481 DNA recombination-mediator protein A FIV01_00325 PF17782 DprA winged helix domain FIV01_00330 PF04361 Protein of unknown function (DUF494) FIV01_00340 PF02222 ATP-grasp domain FIV01_00340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FIV01_00345 PF00731 AIR carboxylase FIV01_00350 PF01300 Telomere recombination FIV01_00355 PF01218 Coproporphyrinogen III oxidase FIV01_00360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIV01_00360 PF01488 Shikimate / quinate 5-dehydrogenase FIV01_00360 PF08501 Shikimate dehydrogenase substrate binding domain FIV01_00370 PF00132 Bacterial transferase hexapeptide (six repeats) FIV01_00430 PF02954 Bacterial regulatory protein, Fis family FIV01_00430 PF00072 Response regulator receiver domain FIV01_00430 PF00158 Sigma-54 interaction domain FIV01_00435 PF00512 His Kinase A (phospho-acceptor) domain FIV01_00435 PF00989 PAS fold FIV01_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_00440 PF03951 Glutamine synthetase, beta-Grasp domain FIV01_00440 PF00120 Glutamine synthetase, catalytic domain FIV01_00450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_00455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_00455 PF00005 ABC transporter FIV01_00460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_00460 PF00005 ABC transporter FIV01_00465 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_00470 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_00470 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_00480 PF02580 D-Tyr-tRNA(Tyr) deacylase FIV01_00485 PF09500 Putative thioesterase (yiiD_Cterm) FIV01_00485 PF00583 Acetyltransferase (GNAT) family FIV01_00495 PF01293 Phosphoenolpyruvate carboxykinase FIV01_00500 PF01430 Hsp33 protein FIV01_00505 PF01479 S4 domain FIV01_00515 PF11356 Type II secretion system protein C FIV01_00520 PF03958 Bacterial type II/III secretion system short domain FIV01_00520 PF00263 Bacterial type II and III secretion system protein FIV01_00525 PF00437 Type II/IV secretion system protein FIV01_00530 PF00482 Type II secretion system (T2SS), protein F FIV01_00535 PF08334 Type II secretion system (T2SS), protein G FIV01_00535 PF07963 Prokaryotic N-terminal methylation motif FIV01_00540 PF12019 Type II transport protein GspH FIV01_00545 PF02501 Type II secretion system (T2SS), protein I FIV01_00545 PF07963 Prokaryotic N-terminal methylation motif FIV01_00550 PF11612 Type II secretion system (T2SS), protein J FIV01_00550 PF07963 Prokaryotic N-terminal methylation motif FIV01_00555 PF03934 Type II secretion system (T2SS), protein K FIV01_00560 PF12693 GspL periplasmic domain FIV01_00560 PF05134 Type II secretion system (T2SS), protein L FIV01_00565 PF04612 Type II secretion system (T2SS), protein M FIV01_00570 PF01203 Type II secretion system (T2SS), protein N FIV01_00575 PF00672 HAMP domain FIV01_00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_00575 PF00512 His Kinase A (phospho-acceptor) domain FIV01_00580 PF00072 Response regulator receiver domain FIV01_00580 PF00486 Transcriptional regulatory protein, C terminal FIV01_00585 PF03449 Transcription elongation factor, N-terminal FIV01_00585 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV01_00590 PF18030 RimK PreATP-grasp domain FIV01_00590 PF08443 RimK-like ATP-grasp domain FIV01_00595 PF09371 Tex-like protein N-terminal domain FIV01_00595 PF16921 Tex protein YqgF-like domain FIV01_00595 PF17674 HHH domain FIV01_00595 PF00575 S1 RNA binding domain FIV01_00605 PF00561 alpha/beta hydrolase fold FIV01_00610 PF00156 Phosphoribosyl transferase domain FIV01_00615 PF01106 NifU-like domain FIV01_00615 PF01521 Iron-sulphur cluster biosynthesis FIV01_00620 PF00293 NUDIX domain FIV01_00625 PF00459 Inositol monophosphatase family FIV01_00630 PF17191 RecG wedge domain FIV01_00630 PF00271 Helicase conserved C-terminal domain FIV01_00630 PF00270 DEAD/DEAH box helicase FIV01_00635 PF00588 SpoU rRNA Methylase family FIV01_00635 PF12105 SpoU, rRNA methylase, C-terminal FIV01_00640 PF13291 ACT domain FIV01_00640 PF04607 Region found in RelA / SpoT proteins FIV01_00640 PF02824 TGS domain FIV01_00645 PF01192 RNA polymerase Rpb6 FIV01_00650 PF00625 Guanylate kinase FIV01_00660 PF00145 C-5 cytosine-specific DNA methylase FIV01_00665 PF00512 His Kinase A (phospho-acceptor) domain FIV01_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_00665 PF02743 Cache domain FIV01_00685 PF03755 YicC-like family, N-terminal region FIV01_00685 PF08340 Domain of unknown function (DUF1732) FIV01_00690 PF03725 3' exoribonuclease family, domain 2 FIV01_00690 PF01138 3' exoribonuclease family, domain 1 FIV01_00695 PF00156 Phosphoribosyl transferase domain FIV01_00700 PF03279 Bacterial lipid A biosynthesis acyltransferase FIV01_00705 PF03279 Bacterial lipid A biosynthesis acyltransferase FIV01_00710 PF00440 Bacterial regulatory proteins, tetR family FIV01_00715 PF02441 Flavoprotein FIV01_00715 PF04127 DNA / pantothenate metabolism flavoprotein FIV01_00720 PF04002 RadC-like JAB domain FIV01_00730 PF00830 Ribosomal L28 family FIV01_00735 PF00471 Ribosomal protein L33 FIV01_00745 PF06827 Zinc finger found in FPG and IleRS FIV01_00745 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FIV01_00745 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FIV01_00750 PF01467 Cytidylyltransferase-like FIV01_00755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV01_00760 PF00535 Glycosyl transferase family 2 FIV01_00765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV01_00780 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FIV01_00785 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FIV01_00795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FIV01_00810 PF00534 Glycosyl transferases group 1 FIV01_00815 PF01370 NAD dependent epimerase/dehydratase family FIV01_00820 PF02397 Bacterial sugar transferase FIV01_00825 PF02719 Polysaccharide biosynthesis protein FIV01_00830 PF13091 PLD-like domain FIV01_00835 PF02237 Biotin protein ligase C terminal domain FIV01_00835 PF03099 Biotin/lipoate A/B protein ligase family FIV01_00835 PF08279 HTH domain FIV01_00840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FIV01_00840 PF01565 FAD binding domain FIV01_00850 PF06082 Exopolysaccharide biosynthesis protein YbjH FIV01_00855 PF06251 Capsule biosynthesis GfcC FIV01_00860 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FIV01_00870 PF02563 Polysaccharide biosynthesis/export protein FIV01_00870 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FIV01_00870 PF10531 SLBB domain FIV01_00875 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIV01_00880 PF13807 G-rich domain on putative tyrosine kinase FIV01_00880 PF02706 Chain length determinant protein FIV01_00880 PF13614 AAA domain FIV01_00895 PF05159 Capsule polysaccharide biosynthesis protein FIV01_00905 PF00793 DAHP synthetase I family FIV01_00915 PF02348 Cytidylyltransferase FIV01_00920 PF00571 CBS domain FIV01_00920 PF01380 SIS domain FIV01_00925 PF00535 Glycosyl transferase family 2 FIV01_00930 PF02397 Bacterial sugar transferase FIV01_00940 PF00166 Chaperonin 10 Kd subunit FIV01_00945 PF00118 TCP-1/cpn60 chaperonin family FIV01_00950 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FIV01_00965 PF02219 Methylenetetrahydrofolate reductase FIV01_00970 PF00742 Homoserine dehydrogenase FIV01_00970 PF03447 Homoserine dehydrogenase, NAD binding domain FIV01_00970 PF00696 Amino acid kinase family FIV01_00975 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV01_00985 PF00390 Malic enzyme, N-terminal domain FIV01_00985 PF03949 Malic enzyme, NAD binding domain FIV01_00995 PF18074 Primosomal protein N C-terminal domain FIV01_00995 PF17764 3′ DNA-binding domain (3′BD) FIV01_00995 PF00271 Helicase conserved C-terminal domain FIV01_00995 PF00270 DEAD/DEAH box helicase FIV01_00995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FIV01_01000 PF00356 Bacterial regulatory proteins, lacI family FIV01_01005 PF05036 Sporulation related domain FIV01_01015 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_01015 PF07724 AAA domain (Cdc48 subfamily) FIV01_01025 PF02313 Fumarate reductase subunit D FIV01_01030 PF02300 Fumarate reductase subunit C FIV01_01035 PF13085 2Fe-2S iron-sulfur cluster binding domain FIV01_01035 PF13183 4Fe-4S dicluster domain FIV01_01040 PF02910 Fumarate reductase flavoprotein C-term FIV01_01040 PF00890 FAD binding domain FIV01_01050 PF00581 Rhodanese-like domain FIV01_01055 PF02556 Preprotein translocase subunit SecB FIV01_01060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FIV01_01060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FIV01_01065 PF06426 Serine acetyltransferase, N-terminal FIV01_01065 PF00132 Bacterial transferase hexapeptide (six repeats) FIV01_01075 PF00311 Phosphoenolpyruvate carboxylase FIV01_01080 PF01546 Peptidase family M20/M25/M40 FIV01_01080 PF07687 Peptidase dimerisation domain FIV01_01085 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV01_01085 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV01_01090 PF00696 Amino acid kinase family FIV01_01095 PF00764 Arginosuccinate synthase FIV01_01100 PF14698 Argininosuccinate lyase C-terminal FIV01_01100 PF00583 Acetyltransferase (GNAT) family FIV01_01100 PF00206 Lyase FIV01_01105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV01_01105 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_01110 PF00462 Glutaredoxin FIV01_01110 PF08534 Redoxin FIV01_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_01115 PF03466 LysR substrate binding domain FIV01_01120 PF00905 Penicillin binding protein transpeptidase domain FIV01_01120 PF00912 Transglycosylase FIV01_01120 PF17092 Penicillin-binding protein OB-like domain FIV01_01145 PF00263 Bacterial type II and III secretion system protein FIV01_01145 PF11741 AMIN domain FIV01_01145 PF07660 Secretin and TonB N terminus short domain FIV01_01145 PF03958 Bacterial type II/III secretion system short domain FIV01_01150 PF01202 Shikimate kinase FIV01_01165 PF02086 D12 class N6 adenine-specific DNA methyltransferase FIV01_01170 PF00834 Ribulose-phosphate 3 epimerase family FIV01_01175 PF13419 Haloacid dehalogenase-like hydrolase FIV01_01180 PF00579 tRNA synthetases class I (W and Y) FIV01_01185 PF00588 SpoU rRNA Methylase family FIV01_01190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIV01_01190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIV01_01195 PF00512 His Kinase A (phospho-acceptor) domain FIV01_01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_01195 PF00672 HAMP domain FIV01_01195 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV01_01200 PF00486 Transcriptional regulatory protein, C terminal FIV01_01200 PF00072 Response regulator receiver domain FIV01_01210 PF01545 Cation efflux family FIV01_01210 PF16916 Dimerisation domain of Zinc Transporter FIV01_01215 PF00365 Phosphofructokinase FIV01_01220 PF03605 Anaerobic c4-dicarboxylate membrane transporter FIV01_01225 PF04055 Radical SAM superfamily FIV01_01230 PF08207 Elongation factor P (EF-P) KOW-like domain FIV01_01230 PF09285 Elongation factor P, C-terminal FIV01_01230 PF01132 Elongation factor P (EF-P) OB domain FIV01_01235 PF01040 UbiA prenyltransferase family FIV01_01240 PF03737 Aldolase/RraA FIV01_01245 PF01554 MatE FIV01_01250 PF00121 Triosephosphate isomerase FIV01_01260 PF00485 Phosphoribulokinase / Uridine kinase family FIV01_01285 PF03144 Elongation factor Tu domain 2 FIV01_01285 PF00009 Elongation factor Tu GTP binding domain FIV01_01285 PF03143 Elongation factor Tu C-terminal domain FIV01_01290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FIV01_01295 PF02357 Transcription termination factor nusG FIV01_01295 PF00467 KOW motif FIV01_01300 PF00298 Ribosomal protein L11, RNA binding domain FIV01_01300 PF03946 Ribosomal protein L11, N-terminal domain FIV01_01305 PF00687 Ribosomal protein L1p/L10e family FIV01_01310 PF00466 Ribosomal protein L10 FIV01_01315 PF00542 Ribosomal protein L7/L12 C-terminal domain FIV01_01315 PF16320 Ribosomal protein L7/L12 dimerisation domain FIV01_01320 PF04560 RNA polymerase Rpb2, domain 7 FIV01_01320 PF04563 RNA polymerase beta subunit FIV01_01320 PF04561 RNA polymerase Rpb2, domain 2 FIV01_01320 PF04565 RNA polymerase Rpb2, domain 3 FIV01_01320 PF00562 RNA polymerase Rpb2, domain 6 FIV01_01320 PF10385 RNA polymerase beta subunit external 1 domain FIV01_01325 PF05000 RNA polymerase Rpb1, domain 4 FIV01_01325 PF04998 RNA polymerase Rpb1, domain 5 FIV01_01325 PF04997 RNA polymerase Rpb1, domain 1 FIV01_01325 PF00623 RNA polymerase Rpb1, domain 2 FIV01_01325 PF04983 RNA polymerase Rpb1, domain 3 FIV01_01330 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FIV01_01335 PF09297 NADH pyrophosphatase zinc ribbon domain FIV01_01335 PF00293 NUDIX domain FIV01_01340 PF01208 Uroporphyrinogen decarboxylase (URO-D) FIV01_01345 PF00440 Bacterial regulatory proteins, tetR family FIV01_01345 PF08360 QacR-like protein, C-terminal region FIV01_01355 PF01551 Peptidase family M23 FIV01_01360 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FIV01_01360 PF01676 Metalloenzyme superfamily FIV01_01365 PF03600 Citrate transporter FIV01_01365 PF02080 TrkA-C domain FIV01_01370 PF02666 Phosphatidylserine decarboxylase FIV01_01375 PF03193 RsgA GTPase FIV01_01380 PF00929 Exonuclease FIV01_01420 PF08331 Domain of unknown function (DUF1730) FIV01_01425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FIV01_01430 PF01520 N-acetylmuramoyl-L-alanine amidase FIV01_01435 PF08676 MutL C terminal dimerisation domain FIV01_01435 PF01119 DNA mismatch repair protein, C-terminal domain FIV01_01445 PF17209 Hfq protein FIV01_01450 PF16360 GTP-binding GTPase Middle Region FIV01_01450 PF13167 GTP-binding GTPase N-terminal FIV01_01450 PF01926 50S ribosome-binding GTPase FIV01_01455 PF01145 SPFH domain / Band 7 family FIV01_01455 PF12221 Bacterial membrane protein N terminal FIV01_01460 PF01145 SPFH domain / Band 7 family FIV01_01465 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FIV01_01480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_01480 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV01_01485 PF08348 YheO-like PAS domain FIV01_01485 PF13309 HTH domain FIV01_01490 PF02635 DsrE/DsrF-like family FIV01_01495 PF02635 DsrE/DsrF-like family FIV01_01500 PF04077 DsrH like protein FIV01_01505 PF00164 Ribosomal protein S12/S23 FIV01_01510 PF00177 Ribosomal protein S7p/S5e FIV01_01515 PF03764 Elongation factor G, domain IV FIV01_01515 PF00679 Elongation factor G C-terminus FIV01_01515 PF14492 Elongation Factor G, domain II FIV01_01515 PF00009 Elongation factor Tu GTP binding domain FIV01_01515 PF03144 Elongation factor Tu domain 2 FIV01_01520 PF03144 Elongation factor Tu domain 2 FIV01_01520 PF00009 Elongation factor Tu GTP binding domain FIV01_01520 PF03143 Elongation factor Tu C-terminal domain FIV01_01525 PF04324 BFD-like [2Fe-2S] binding domain FIV01_01530 PF00210 Ferritin-like domain FIV01_01535 PF01250 Ribosomal protein S6 FIV01_01540 PF01084 Ribosomal protein S18 FIV01_01545 PF01281 Ribosomal protein L9, N-terminal domain FIV01_01545 PF03948 Ribosomal protein L9, C-terminal domain FIV01_01555 PF03796 DnaB-like helicase C terminal domain FIV01_01555 PF00772 DnaB-like helicase N terminal domain FIV01_01560 PF00842 Alanine racemase, C-terminal domain FIV01_01560 PF01168 Alanine racemase, N-terminal domain FIV01_01565 PF04403 Paraquat-inducible protein A FIV01_01570 PF02470 MlaD protein FIV01_01580 PF01894 Uncharacterised protein family UPF0047 FIV01_01585 PF00342 Phosphoglucose isomerase FIV01_01605 PF00005 ABC transporter FIV01_01615 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FIV01_01620 PF01625 Peptide methionine sulfoxide reductase FIV01_01625 PF17243 POTRA domain TamA domain 1 FIV01_01625 PF07244 Surface antigen variable number repeat FIV01_01625 PF01103 Surface antigen FIV01_01630 PF04357 TamB, inner membrane protein subunit of TAM complex FIV01_01635 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FIV01_01640 PF00719 Inorganic pyrophosphatase FIV01_01645 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FIV01_01650 PF08245 Mur ligase middle domain FIV01_01650 PF02875 Mur ligase family, glutamate ligase domain FIV01_01650 PF01225 Mur ligase family, catalytic domain FIV01_01655 PF02441 Flavoprotein FIV01_01665 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_01670 PF00005 ABC transporter FIV01_01675 PF04751 Protein of unknown function (DUF615) FIV01_01680 PF01523 Putative modulator of DNA gyrase FIV01_01685 PF00696 Amino acid kinase family FIV01_01685 PF01842 ACT domain FIV01_01690 PF00266 Aminotransferase class-V FIV01_01700 PF17755 UvrA DNA-binding domain FIV01_01700 PF17760 UvrA interaction domain FIV01_01700 PF00005 ABC transporter FIV01_01705 PF00483 Nucleotidyl transferase FIV01_01710 PF00196 Bacterial regulatory proteins, luxR family FIV01_01715 PF00436 Single-strand binding protein family FIV01_01720 PF00563 EAL domain FIV01_01720 PF00990 Diguanylate cyclase, GGDEF domain FIV01_01720 PF17157 Gammaproteobacterial periplasmic sensor domain FIV01_01740 PF11741 AMIN domain FIV01_01740 PF07660 Secretin and TonB N terminus short domain FIV01_01740 PF00263 Bacterial type II and III secretion system protein FIV01_01740 PF03958 Bacterial type II/III secretion system short domain FIV01_01745 PF01471 Putative peptidoglycan binding domain FIV01_01745 PF13401 AAA domain FIV01_01755 PF00437 Type II/IV secretion system protein FIV01_01760 PF00482 Type II secretion system (T2SS), protein F FIV01_01770 PF07963 Prokaryotic N-terminal methylation motif FIV01_01770 PF00114 Pilin (bacterial filament) FIV01_01775 PF07963 Prokaryotic N-terminal methylation motif FIV01_01775 PF00114 Pilin (bacterial filament) FIV01_01810 PF04085 rod shape-determining protein MreC FIV01_01815 PF04093 rod shape-determining protein MreD FIV01_01820 PF02545 Maf-like protein FIV01_01825 PF10150 Ribonuclease E/G family FIV01_01825 PF00575 S1 RNA binding domain FIV01_01830 PF13116 Protein of unknown function FIV01_01830 PF13502 AsmA-like C-terminal region FIV01_01835 PF00795 Carbon-nitrogen hydrolase FIV01_01840 PF01523 Putative modulator of DNA gyrase FIV01_01890 PF01464 Transglycosylase SLT domain FIV01_01890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FIV01_01895 PF04362 Bacterial Fe(2+) trafficking FIV01_01900 PF00633 Helix-hairpin-helix motif FIV01_01900 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV01_01900 PF14815 NUDIX domain FIV01_01905 PF02390 Putative methyltransferase FIV01_01910 PF04960 Glutaminase FIV01_01920 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_01930 PF06969 HemN C-terminal domain FIV01_01930 PF04055 Radical SAM superfamily FIV01_01935 PF01725 Ham1 family FIV01_01945 PF02325 YGGT family FIV01_01950 PF03807 NADP oxidoreductase coenzyme F420-dependent FIV01_01950 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIV01_01955 PF01168 Alanine racemase, N-terminal domain FIV01_01960 PF00437 Type II/IV secretion system protein FIV01_01965 PF00437 Type II/IV secretion system protein FIV01_01970 PF03652 Holliday junction resolvase FIV01_01980 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FIV01_01980 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FIV01_01985 PF04452 RNA methyltransferase FIV01_01990 PF01810 LysE type translocator FIV01_01995 PF10263 SprT-like family FIV01_01995 PF17283 SprT-like zinc ribbon domain FIV01_02005 PF02772 S-adenosylmethionine synthetase, central domain FIV01_02005 PF00438 S-adenosylmethionine synthetase, N-terminal domain FIV01_02005 PF02773 S-adenosylmethionine synthetase, C-terminal domain FIV01_02010 PF02780 Transketolase, C-terminal domain FIV01_02010 PF02779 Transketolase, pyrimidine binding domain FIV01_02010 PF00456 Transketolase, thiamine diphosphate binding domain FIV01_02015 PF03466 LysR substrate binding domain FIV01_02015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_02025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV01_02025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV01_02030 PF00162 Phosphoglycerate kinase FIV01_02035 PF01116 Fructose-bisphosphate aldolase class-II FIV01_02045 PF00924 Mechanosensitive ion channel FIV01_02045 PF05552 Conserved TM helix FIV01_02050 PF04402 Protein of unknown function (DUF541) FIV01_02060 PF00224 Pyruvate kinase, barrel domain FIV01_02060 PF02887 Pyruvate kinase, alpha/beta domain FIV01_02065 PF00455 DeoR C terminal sensor domain FIV01_02065 PF08220 DeoR-like helix-turn-helix domain FIV01_02070 PF01380 SIS domain FIV01_02080 PF01555 DNA methylase FIV01_02105 PF08722 TnsA endonuclease N terminal FIV01_02105 PF08721 TnsA endonuclease C terminal FIV01_02110 PF00665 Integrase core domain FIV01_02115 PF11426 Tn7 transposition regulator TnsC FIV01_02115 PF13401 AAA domain FIV01_02120 PF06527 TniQ FIV01_02120 PF15978 Tn7-like transposition protein D FIV01_02125 PF18623 TnsE C-terminal domain FIV01_02150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_02150 PF08447 PAS fold FIV01_02155 PF12729 Four helix bundle sensory module for signal transduction FIV01_02155 PF00672 HAMP domain FIV01_02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_02180 PF01593 Flavin containing amine oxidoreductase FIV01_02185 PF05860 haemagglutination activity domain FIV01_02185 PF13332 Hemagglutinin repeat FIV01_02190 PF17287 POTRA domain FIV01_02190 PF08479 POTRA domain, ShlB-type FIV01_02190 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FIV01_02200 PF00348 Polyprenyl synthetase FIV01_02205 PF00829 Ribosomal prokaryotic L21 protein FIV01_02210 PF01016 Ribosomal L27 protein FIV01_02215 PF01926 50S ribosome-binding GTPase FIV01_02215 PF01018 GTP1/OBG FIV01_02220 PF00186 Dihydrofolate reductase FIV01_02230 PF00694 Aconitase C-terminal domain FIV01_02235 PF00330 Aconitase family (aconitate hydratase) FIV01_02240 PF00180 Isocitrate/isopropylmalate dehydrogenase FIV01_02245 PF00682 HMGL-like FIV01_02245 PF08502 LeuA allosteric (dimerisation) domain FIV01_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_02250 PF03466 LysR substrate binding domain FIV01_02255 PF00501 AMP-binding enzyme FIV01_02265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV01_02265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV01_02265 PF00205 Thiamine pyrophosphate enzyme, central domain FIV01_02270 PF10369 Small subunit of acetolactate synthase FIV01_02275 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV01_02280 PF07690 Major Facilitator Superfamily FIV01_02285 PF01842 ACT domain FIV01_02285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV01_02285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV01_02290 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FIV01_02295 PF01812 5-formyltetrahydrofolate cyclo-ligase family FIV01_02315 PF01494 FAD binding domain FIV01_02320 PF01494 FAD binding domain FIV01_02335 PF01571 Aminomethyltransferase folate-binding domain FIV01_02340 PF03937 Flavinator of succinate dehydrogenase FIV01_02345 PF02910 Fumarate reductase flavoprotein C-term FIV01_02345 PF00890 FAD binding domain FIV01_02350 PF08281 Sigma-70, region 4 FIV01_02350 PF04542 Sigma-70 region 2 FIV01_02355 PF03872 Anti sigma-E protein RseA, N-terminal domain FIV01_02355 PF03873 Anti sigma-E protein RseA, C-terminal domain FIV01_02360 PF03888 MucB/RseB N-terminal domain FIV01_02360 PF17188 MucB/RseB C-terminal domain FIV01_02370 PF00009 Elongation factor Tu GTP binding domain FIV01_02370 PF00679 Elongation factor G C-terminus FIV01_02370 PF06421 GTP-binding protein LepA C-terminus FIV01_02370 PF03144 Elongation factor Tu domain 2 FIV01_02375 PF10502 Signal peptidase, peptidase S26 FIV01_02385 PF01926 50S ribosome-binding GTPase FIV01_02385 PF07650 KH domain FIV01_02390 PF11967 Recombination protein O N terminal FIV01_02390 PF02565 Recombination protein O C terminal FIV01_02395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FIV01_02400 PF01648 4'-phosphopantetheinyl transferase superfamily FIV01_02405 PF00072 Response regulator receiver domain FIV01_02405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_02405 PF01627 Hpt domain FIV01_02405 PF00672 HAMP domain FIV01_02405 PF00512 His Kinase A (phospho-acceptor) domain FIV01_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_02410 PF01938 TRAM domain FIV01_02410 PF05958 tRNA (Uracil-5-)-methyltransferase FIV01_02415 PF04607 Region found in RelA / SpoT proteins FIV01_02415 PF02824 TGS domain FIV01_02415 PF13291 ACT domain FIV01_02420 PF03819 MazG nucleotide pyrophosphohydrolase domain FIV01_02425 PF06418 CTP synthase N-terminus FIV01_02425 PF00117 Glutamine amidotransferase class-I FIV01_02430 PF03952 Enolase, N-terminal domain FIV01_02430 PF00113 Enolase, C-terminal TIM barrel domain FIV01_02440 PF01810 LysE type translocator FIV01_02445 PF12833 Helix-turn-helix domain FIV01_02450 PF01743 Poly A polymerase head domain FIV01_02450 PF12627 Probable RNA and SrmB- binding site of polymerase A FIV01_02450 PF01966 HD domain FIV01_02455 PF01471 Putative peptidoglycan binding domain FIV01_02455 PF13401 AAA domain FIV01_02460 PF16537 Type II secretion system protein B FIV01_02465 PF08239 Bacterial SH3 domain FIV01_02470 PF01384 Phosphate transporter family FIV01_02475 PF01865 Protein of unknown function DUF47 FIV01_02480 PF01928 CYTH domain FIV01_02485 PF00520 Ion transport protein FIV01_02485 PF00027 Cyclic nucleotide-binding domain FIV01_02490 PF08335 GlnD PII-uridylyltransferase FIV01_02490 PF03710 Glutamate-ammonia ligase adenylyltransferase FIV01_02500 PF00072 Response regulator receiver domain FIV01_02500 PF00486 Transcriptional regulatory protein, C terminal FIV01_02510 PF03737 Aldolase/RraA FIV01_02520 PF00696 Amino acid kinase family FIV01_02520 PF13840 ACT domain FIV01_02520 PF03447 Homoserine dehydrogenase, NAD binding domain FIV01_02520 PF01842 ACT domain FIV01_02520 PF00742 Homoserine dehydrogenase FIV01_02525 PF08544 GHMP kinases C terminal FIV01_02525 PF00288 GHMP kinases N terminal domain FIV01_02530 PF14821 Threonine synthase N terminus FIV01_02530 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_02535 PF01497 Periplasmic binding protein FIV01_02545 PF01048 Phosphorylase superfamily FIV01_02550 PF00312 Ribosomal protein S15 FIV01_02555 PF00013 KH domain FIV01_02555 PF03725 3' exoribonuclease family, domain 2 FIV01_02555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FIV01_02555 PF01138 3' exoribonuclease family, domain 1 FIV01_02555 PF00575 S1 RNA binding domain FIV01_02560 PF13181 Tetratricopeptide repeat FIV01_02560 PF07719 Tetratricopeptide repeat FIV01_02570 PF00072 Response regulator receiver domain FIV01_02570 PF02954 Bacterial regulatory protein, Fis family FIV01_02570 PF00158 Sigma-54 interaction domain FIV01_02585 PF00248 Aldo/keto reductase family FIV01_02595 PF02976 DNA mismatch repair enzyme MutH FIV01_02605 PF01590 GAF domain FIV01_02605 PF05524 PEP-utilising enzyme, N-terminal FIV01_02605 PF00391 PEP-utilising enzyme, mobile domain FIV01_02605 PF02896 PEP-utilising enzyme, TIM barrel domain FIV01_02610 PF01925 Sulfite exporter TauE/SafE FIV01_02620 PF00303 Thymidylate synthase FIV01_02625 PF02690 Na+/Pi-cotransporter FIV01_02630 PF03466 LysR substrate binding domain FIV01_02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_02635 PF01022 Bacterial regulatory protein, arsR family FIV01_02640 PF01649 Ribosomal protein S20 FIV01_02645 PF03023 Lipid II flippase MurJ FIV01_02650 PF06574 FAD synthetase FIV01_02650 PF01687 Riboflavin kinase FIV01_02655 PF08264 Anticodon-binding domain of tRNA FIV01_02655 PF06827 Zinc finger found in FPG and IleRS FIV01_02655 PF00133 tRNA synthetases class I (I, L, M and V) FIV01_02660 PF01252 Signal peptidase (SPase) II FIV01_02665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_02670 PF02401 LytB protein FIV01_02675 PF02554 Carbon starvation protein CstA FIV01_02690 PF01380 SIS domain FIV01_02695 PF03702 Anhydro-N-acetylmuramic acid kinase FIV01_02700 PF00933 Glycosyl hydrolase family 3 N terminal domain FIV01_02705 PF00793 DAHP synthetase I family FIV01_02710 PF01817 Chorismate mutase type II FIV01_02710 PF02153 Prephenate dehydrogenase FIV01_02715 PF07238 PilZ domain FIV01_02720 PF12848 ABC transporter FIV01_02720 PF00005 ABC transporter FIV01_02725 PF14718 Soluble lytic murein transglycosylase L domain FIV01_02725 PF01464 Transglycosylase SLT domain FIV01_02735 PF01931 Protein of unknown function DUF84 FIV01_02740 PF00990 Diguanylate cyclase, GGDEF domain FIV01_02740 PF00563 EAL domain FIV01_02745 PF13416 Bacterial extracellular solute-binding protein FIV01_02750 PF00800 Prephenate dehydratase FIV01_02750 PF01817 Chorismate mutase type II FIV01_02755 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIV01_02760 PF13525 Outer membrane lipoprotein FIV01_02765 PF01479 S4 domain FIV01_02765 PF00849 RNA pseudouridylate synthase FIV01_02775 PF07724 AAA domain (Cdc48 subfamily) FIV01_02775 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_02775 PF17871 AAA lid domain FIV01_02775 PF02861 Clp amino terminal domain, pathogenicity island component FIV01_02775 PF10431 C-terminal, D2-small domain, of ClpB protein FIV01_02815 PF13358 DDE superfamily endonuclease FIV01_02825 PF00459 Inositol monophosphatase family FIV01_02830 PF00588 SpoU rRNA Methylase family FIV01_02835 PF02082 Transcriptional regulator FIV01_02840 PF00266 Aminotransferase class-V FIV01_02845 PF01592 NifU-like N terminal domain FIV01_02850 PF01521 Iron-sulphur cluster biosynthesis FIV01_02855 PF07743 HSCB C-terminal oligomerisation domain FIV01_02855 PF00226 DnaJ domain FIV01_02860 PF00012 Hsp70 protein FIV01_02865 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV01_02870 PF04384 Iron-sulphur cluster assembly FIV01_02875 PF00883 Cytosol aminopeptidase family, catalytic domain FIV01_02875 PF12404 Peptidase FIV01_02880 PF00334 Nucleoside diphosphate kinase FIV01_02885 PF03144 Elongation factor Tu domain 2 FIV01_02885 PF14492 Elongation Factor G, domain II FIV01_02885 PF00009 Elongation factor Tu GTP binding domain FIV01_02885 PF03764 Elongation factor G, domain IV FIV01_02885 PF00679 Elongation factor G C-terminus FIV01_02890 PF03466 LysR substrate binding domain FIV01_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_02895 PF00501 AMP-binding enzyme FIV01_02905 PF02417 Chromate transporter FIV01_02930 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FIV01_02930 PF14602 Hexapeptide repeat of succinyl-transferase FIV01_02935 PF00578 AhpC/TSA family FIV01_02935 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIV01_02940 PF03466 LysR substrate binding domain FIV01_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_02945 PF01274 Malate synthase FIV01_02950 PF00463 Isocitrate lyase family FIV01_02955 PF00571 CBS domain FIV01_02960 PF02547 Queuosine biosynthesis protein FIV01_02965 PF01702 Queuine tRNA-ribosyltransferase FIV01_02970 PF02699 Preprotein translocase subunit FIV01_02975 PF02355 Protein export membrane protein FIV01_02975 PF13721 SecD export protein N-terminal TM region FIV01_02975 PF07549 SecD/SecF GG Motif FIV01_02980 PF07549 SecD/SecF GG Motif FIV01_02980 PF02355 Protein export membrane protein FIV01_02990 PF03411 Penicillin-insensitive murein endopeptidase FIV01_02995 PF12838 4Fe-4S dicluster domain FIV01_03005 PF04381 Putative exonuclease, RdgC FIV01_03010 PF00072 Response regulator receiver domain FIV01_03010 PF00486 Transcriptional regulatory protein, C terminal FIV01_03015 PF11808 Phosphate regulon sensor protein PhoR FIV01_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_03015 PF00512 His Kinase A (phospho-acceptor) domain FIV01_03015 PF00989 PAS fold FIV01_03020 PF12849 PBP superfamily domain FIV01_03025 PF02541 Ppx/GppA phosphatase family FIV01_03030 PF02503 Polyphosphate kinase middle domain FIV01_03030 PF17941 Polyphosphate kinase C-terminal domain 1 FIV01_03030 PF13090 Polyphosphate kinase C-terminal domain 2 FIV01_03030 PF13089 Polyphosphate kinase N-terminal domain FIV01_03035 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_03040 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_03045 PF00005 ABC transporter FIV01_03050 PF01895 PhoU domain FIV01_03055 PF03976 Polyphosphate kinase 2 (PPK2) FIV01_03060 PF03932 CutC family FIV01_03065 PF07130 YebG protein FIV01_03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_03070 PF03466 LysR substrate binding domain FIV01_03080 PF17946 RecC C-terminal domain FIV01_03085 PF00580 UvrD/REP helicase N-terminal domain FIV01_03085 PF13361 UvrD-like helicase C-terminal domain FIV01_03085 PF12705 PD-(D/E)XK nuclease superfamily FIV01_03090 PF13538 UvrD-like helicase C-terminal domain FIV01_03095 PF00696 Amino acid kinase family FIV01_03095 PF00583 Acetyltransferase (GNAT) family FIV01_03100 PF03562 MltA specific insert domain FIV01_03100 PF06725 3D domain FIV01_03105 PF00899 ThiF family FIV01_03110 PF02657 Fe-S metabolism associated domain FIV01_03115 PF04055 Radical SAM superfamily FIV01_03120 PF13464 Domain of unknown function (DUF4115) FIV01_03125 PF04551 GcpE protein FIV01_03130 PF03129 Anticodon binding domain FIV01_03130 PF13393 Histidyl-tRNA synthetase FIV01_03135 PF09976 Tetratricopeptide repeat-like domain FIV01_03140 PF13360 PQQ-like domain FIV01_03145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FIV01_03145 PF01926 50S ribosome-binding GTPase FIV01_03160 PF02601 Exonuclease VII, large subunit FIV01_03160 PF13742 OB-fold nucleic acid binding domain FIV01_03165 PF00478 IMP dehydrogenase / GMP reductase domain FIV01_03165 PF00571 CBS domain FIV01_03170 PF00117 Glutamine amidotransferase class-I FIV01_03170 PF00958 GMP synthase C terminal domain FIV01_03170 PF02540 NAD synthase FIV01_03175 PF06483 Chitinase C FIV01_03175 PF00704 Glycosyl hydrolases family 18 FIV01_03180 PF01235 Sodium:alanine symporter family FIV01_03185 PF01266 FAD dependent oxidoreductase FIV01_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_03190 PF03466 LysR substrate binding domain FIV01_03200 PF01584 CheW-like domain FIV01_03200 PF00072 Response regulator receiver domain FIV01_03205 PF01553 Acyltransferase FIV01_03210 PF00082 Subtilase family FIV01_03210 PF00082 Subtilase family FIV01_03225 PF13657 HipA N-terminal domain FIV01_03225 PF07804 HipA-like C-terminal domain FIV01_03240 PF02384 N-6 DNA Methylase FIV01_03260 PF07804 HipA-like C-terminal domain FIV01_03260 PF13657 HipA N-terminal domain FIV01_03265 PF01381 Helix-turn-helix FIV01_03270 PF01668 SmpB protein FIV01_03275 PF03364 Polyketide cyclase / dehydrase and lipid transport FIV01_03280 PF03658 RnfH family Ubiquitin FIV01_03285 PF04355 SmpA / OmlA family FIV01_03290 PF02463 RecF/RecN/SMC N terminal domain FIV01_03295 PF00080 Copper/zinc superoxide dismutase (SODC) FIV01_03300 PF01513 ATP-NAD kinase FIV01_03305 PF01025 GrpE FIV01_03310 PF00375 Sodium:dicarboxylate symporter family FIV01_03315 PF00012 Hsp70 protein FIV01_03320 PF00684 DnaJ central domain FIV01_03320 PF01556 DnaJ C terminal domain FIV01_03320 PF00226 DnaJ domain FIV01_03350 PF14437 MafB19-like deaminase FIV01_03360 PF01464 Transglycosylase SLT domain FIV01_03360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_03365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FIV01_03365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FIV01_03365 PF02769 AIR synthase related protein, C-terminal domain FIV01_03410 PF02350 UDP-N-acetylglucosamine 2-epimerase FIV01_03420 PF06786 Uncharacterised protein family (UPF0253) FIV01_03435 PF00551 Formyl transferase FIV01_03440 PF02769 AIR synthase related protein, C-terminal domain FIV01_03440 PF00586 AIR synthase related protein, N-terminal domain FIV01_03450 PF03180 NLPA lipoprotein FIV01_03455 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_03460 PF00005 ABC transporter FIV01_03460 PF09383 NIL domain FIV01_03475 PF00356 Bacterial regulatory proteins, lacI family FIV01_03480 PF02378 Phosphotransferase system, EIIC FIV01_03480 PF00367 phosphotransferase system, EIIB FIV01_03485 PF00128 Alpha amylase, catalytic domain FIV01_03485 PF16657 Maltogenic Amylase, C-terminal domain FIV01_03510 PF13533 Biotin-lipoyl like FIV01_03515 PF00873 AcrB/AcrD/AcrF family FIV01_03525 PF00464 Serine hydroxymethyltransferase FIV01_03535 PF04055 Radical SAM superfamily FIV01_03535 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FIV01_03540 PF03099 Biotin/lipoate A/B protein ligase family FIV01_03545 PF04359 Protein of unknown function (DUF493) FIV01_03550 PF07943 Penicillin-binding protein 5, C-terminal domain FIV01_03550 PF00768 D-alanyl-D-alanine carboxypeptidase FIV01_03555 PF03330 Lytic transglycolase FIV01_03555 PF05036 Sporulation related domain FIV01_03560 PF01098 Cell cycle protein FIV01_03565 PF03717 Penicillin-binding Protein dimerisation domain FIV01_03565 PF00905 Penicillin binding protein transpeptidase domain FIV01_03580 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FIV01_03580 PF06144 DNA polymerase III, delta subunit FIV01_03585 PF04390 Lipopolysaccharide-assembly FIV01_03590 PF13603 Leucyl-tRNA synthetase, Domain 2 FIV01_03590 PF00133 tRNA synthetases class I (I, L, M and V) FIV01_03590 PF08264 Anticodon-binding domain of tRNA FIV01_03600 PF00795 Carbon-nitrogen hydrolase FIV01_03605 PF03471 Transporter associated domain FIV01_03605 PF00571 CBS domain FIV01_03615 PF02562 PhoH-like protein FIV01_03620 PF04055 Radical SAM superfamily FIV01_03620 PF01938 TRAM domain FIV01_03620 PF00919 Uncharacterized protein family UPF0004 FIV01_03625 PF01494 FAD binding domain FIV01_03630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV01_03645 PF00381 PTS HPr component phosphorylation site FIV01_03650 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_03660 PF04354 ZipA, C-terminal FtsZ-binding domain FIV01_03685 PF01145 SPFH domain / Band 7 family FIV01_03685 PF16200 C-terminal region of band_7 FIV01_03690 PF00085 Thioredoxin FIV01_03695 PF00106 short chain dehydrogenase FIV01_03700 PF08338 Domain of unknown function (DUF1731) FIV01_03700 PF01370 NAD dependent epimerase/dehydratase family FIV01_03705 PF07556 Protein of unknown function (DUF1538) FIV01_03710 PF07556 Protein of unknown function (DUF1538) FIV01_03725 PF17323 Trans-membrane regulatory protein ToxS FIV01_03730 PF00486 Transcriptional regulatory protein, C terminal FIV01_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_03735 PF00183 Hsp90 protein FIV01_03745 PF05191 Adenylate kinase, active site lid FIV01_03750 PF00762 Ferrochelatase FIV01_03770 PF00403 Heavy-metal-associated domain FIV01_03775 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV01_03820 PF00072 Response regulator receiver domain FIV01_03820 PF01584 CheW-like domain FIV01_03825 PF03705 CheR methyltransferase, all-alpha domain FIV01_03825 PF01739 CheR methyltransferase, SAM binding domain FIV01_03830 PF00460 Flagella basal body rod protein FIV01_03835 PF00460 Flagella basal body rod protein FIV01_03835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_03840 PF13861 FlgD Tudor-like domain FIV01_03840 PF03963 Flagellar hook capping protein - N-terminal region FIV01_03840 PF13860 FlgD Ig-like domain FIV01_03845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_03845 PF07559 Flagellar basal body protein FlaE FIV01_03845 PF00460 Flagella basal body rod protein FIV01_03850 PF00460 Flagella basal body rod protein FIV01_03850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_03855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_03855 PF00460 Flagella basal body rod protein FIV01_03860 PF02107 Flagellar L-ring protein FIV01_03865 PF02119 Flagellar P-ring protein FIV01_03870 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FIV01_03870 PF10135 Rod binding protein FIV01_03875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_03875 PF07196 Flagellin hook IN motif FIV01_03885 PF07196 Flagellin hook IN motif FIV01_03885 PF00700 Bacterial flagellin C-terminal helical region FIV01_03885 PF00669 Bacterial flagellin N-terminal helical region FIV01_03890 PF00700 Bacterial flagellin C-terminal helical region FIV01_03890 PF07196 Flagellin hook IN motif FIV01_03890 PF00669 Bacterial flagellin N-terminal helical region FIV01_03990 PF01926 50S ribosome-binding GTPase FIV01_03990 PF06071 Protein of unknown function (DUF933) FIV01_03995 PF01195 Peptidyl-tRNA hydrolase FIV01_04000 PF14572 Phosphoribosyl synthetase-associated domain FIV01_04000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FIV01_04005 PF00288 GHMP kinases N terminal domain FIV01_04005 PF08544 GHMP kinases C terminal FIV01_04010 PF03550 Outer membrane lipoprotein LolB FIV01_04020 PF03462 PCRF domain FIV01_04020 PF00472 RF-1 domain FIV01_04025 PF17827 PrmC N-terminal domain FIV01_04025 PF13847 Methyltransferase domain FIV01_04035 PF13369 Transglutaminase-like superfamily FIV01_04045 PF00149 Calcineurin-like phosphoesterase FIV01_04045 PF02872 5'-nucleotidase, C-terminal domain FIV01_04050 PF04073 Aminoacyl-tRNA editing domain FIV01_04055 PF00860 Permease family FIV01_04070 PF03358 NADPH-dependent FMN reductase FIV01_04075 PF03960 ArsC family FIV01_04080 PF13181 Tetratricopeptide repeat FIV01_04080 PF01435 Peptidase family M48 FIV01_04085 PF01206 Sulfurtransferase TusA FIV01_04090 PF01594 AI-2E family transporter FIV01_04095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_04095 PF00672 HAMP domain FIV01_04095 PF02743 Cache domain FIV01_04100 PF01979 Amidohydrolase family FIV01_04105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIV01_04110 PF01546 Peptidase family M20/M25/M40 FIV01_04110 PF07687 Peptidase dimerisation domain FIV01_04115 PF00171 Aldehyde dehydrogenase family FIV01_04120 PF00202 Aminotransferase class-III FIV01_04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_04125 PF03466 LysR substrate binding domain FIV01_04130 PF00440 Bacterial regulatory proteins, tetR family FIV01_04130 PF08362 YcdC-like protein, C-terminal region FIV01_04135 PF04055 Radical SAM superfamily FIV01_04140 PF04055 Radical SAM superfamily FIV01_04155 PF00881 Nitroreductase family FIV01_04155 PF01996 F420-0:Gamma-glutamyl ligase FIV01_04170 PF00578 AhpC/TSA family FIV01_04175 PF01842 ACT domain FIV01_04180 PF00701 Dihydrodipicolinate synthetase family FIV01_04190 PF13726 Na+-H+ antiporter family FIV01_04190 PF03553 Na+/H+ antiporter family FIV01_04195 PF00929 Exonuclease FIV01_04200 PF18393 MotY N-terminal domain FIV01_04200 PF00691 OmpA family FIV01_04205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_04210 PF00633 Helix-hairpin-helix motif FIV01_04210 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV01_04210 PF10576 Iron-sulfur binding domain of endonuclease III FIV01_04225 PF03116 NQR2, RnfD, RnfE family FIV01_04230 PF10531 SLBB domain FIV01_04230 PF13375 RnfC Barrel sandwich hybrid domain FIV01_04230 PF12838 4Fe-4S dicluster domain FIV01_04230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV01_04235 PF04060 Putative Fe-S cluster FIV01_04240 PF02508 Rnf-Nqr subunit, membrane protein FIV01_04245 PF01464 Transglycosylase SLT domain FIV01_04245 PF01476 LysM domain FIV01_04260 PF07690 Major Facilitator Superfamily FIV01_04270 PF01638 HxlR-like helix-turn-helix FIV01_04280 PF00460 Flagella basal body rod protein FIV01_04285 PF00460 Flagella basal body rod protein FIV01_04285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_04290 PF13861 FlgD Tudor-like domain FIV01_04290 PF03963 Flagellar hook capping protein - N-terminal region FIV01_04290 PF13860 FlgD Ig-like domain FIV01_04295 PF00460 Flagella basal body rod protein FIV01_04295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_04295 PF07559 Flagellar basal body protein FlaE FIV01_04300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_04300 PF00460 Flagella basal body rod protein FIV01_04305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV01_04305 PF00460 Flagella basal body rod protein FIV01_04310 PF02107 Flagellar L-ring protein FIV01_04315 PF02119 Flagellar P-ring protein FIV01_04320 PF10135 Rod binding protein FIV01_04320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FIV01_04330 PF00669 Bacterial flagellin N-terminal helical region FIV01_04330 PF00700 Bacterial flagellin C-terminal helical region FIV01_04360 PF00199 Catalase FIV01_04370 PF00691 OmpA family FIV01_04370 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV01_04375 PF01618 MotA/TolQ/ExbB proton channel family FIV01_04380 PF04545 Sigma-70, region 4 FIV01_04380 PF04542 Sigma-70 region 2 FIV01_04385 PF03748 Flagellar basal body-associated protein FliL FIV01_04405 PF02465 Flagellar hook-associated protein 2 N-terminus FIV01_04405 PF07195 Flagellar hook-associated protein 2 C-terminus FIV01_04405 PF07196 Flagellin hook IN motif FIV01_04470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FIV01_04485 PF01810 LysE type translocator FIV01_04495 PF00765 Autoinducer synthase FIV01_04505 PF00083 Sugar (and other) transporter FIV01_04505 PF08946 Osmosensory transporter coiled coil FIV01_04530 PF01609 Transposase DDE domain FIV01_04530 PF13808 DDE_Tnp_1-associated FIV01_04555 PF00255 Glutathione peroxidase FIV01_04585 PF06628 Catalase-related immune-responsive FIV01_04585 PF00199 Catalase FIV01_04615 PF00669 Bacterial flagellin N-terminal helical region FIV01_04615 PF00700 Bacterial flagellin C-terminal helical region FIV01_04620 PF00771 FHIPEP family FIV01_04625 PF01312 FlhB HrpN YscU SpaS Family FIV01_04630 PF01311 Bacterial export proteins, family 1 FIV01_04635 PF01313 Bacterial export proteins, family 3 FIV01_04640 PF00813 FliP family FIV01_04645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV01_04655 PF05736 OprF membrane domain FIV01_04655 PF00691 OmpA family FIV01_04660 PF02954 Bacterial regulatory protein, Fis family FIV01_04660 PF00158 Sigma-54 interaction domain FIV01_04660 PF00072 Response regulator receiver domain FIV01_04665 PF02049 Flagellar hook-basal body complex protein FliE FIV01_04670 PF08345 Flagellar M-ring protein C-terminal FIV01_04670 PF01514 Secretory protein of YscJ/FliF family FIV01_04685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_04685 PF18269 T3SS EscN ATPase C-terminal domain FIV01_04695 PF01551 Peptidase family M23 FIV01_04695 PF04225 Opacity-associated protein A LysM-like domain FIV01_04730 PF00072 Response regulator receiver domain FIV01_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_04740 PF13426 PAS domain FIV01_04740 PF00989 PAS fold FIV01_04740 PF00512 His Kinase A (phospho-acceptor) domain FIV01_04740 PF13188 PAS domain FIV01_04750 PF00158 Sigma-54 interaction domain FIV01_04750 PF00072 Response regulator receiver domain FIV01_04750 PF02954 Bacterial regulatory protein, Fis family FIV01_04760 PF00512 His Kinase A (phospho-acceptor) domain FIV01_04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_04760 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_04775 PF00512 His Kinase A (phospho-acceptor) domain FIV01_04775 PF00072 Response regulator receiver domain FIV01_04775 PF13188 PAS domain FIV01_04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_04775 PF08448 PAS fold FIV01_04785 PF13188 PAS domain FIV01_04785 PF00072 Response regulator receiver domain FIV01_04785 PF08448 PAS fold FIV01_04785 PF00512 His Kinase A (phospho-acceptor) domain FIV01_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_04795 PF04851 Type III restriction enzyme, res subunit FIV01_04795 PF02151 UvrB/uvrC motif FIV01_04795 PF17757 UvrB interaction domain FIV01_04795 PF00271 Helicase conserved C-terminal domain FIV01_04795 PF12344 Ultra-violet resistance protein B FIV01_04810 PF00072 Response regulator receiver domain FIV01_04810 PF00158 Sigma-54 interaction domain FIV01_04810 PF02954 Bacterial regulatory protein, Fis family FIV01_04815 PF01627 Hpt domain FIV01_04820 PF01933 Uncharacterised protein family UPF0052 FIV01_04825 PF06463 Molybdenum Cofactor Synthesis C FIV01_04825 PF04055 Radical SAM superfamily FIV01_04830 PF00994 Probable molybdopterin binding domain FIV01_04835 PF01967 MoaC family FIV01_04840 PF02597 ThiS family FIV01_04845 PF02391 MoaE protein FIV01_04855 PF00392 Bacterial regulatory proteins, gntR family FIV01_04855 PF07085 DRTGG domain FIV01_04855 PF00571 CBS domain FIV01_04855 PF03061 Thioesterase superfamily FIV01_04860 PF01554 MatE FIV01_04865 PF00403 Heavy-metal-associated domain FIV01_04870 PF01048 Phosphorylase superfamily FIV01_04875 PF07690 Major Facilitator Superfamily FIV01_04885 PF01588 Putative tRNA binding domain FIV01_04885 PF09334 tRNA synthetases class I (M) FIV01_04895 PF10609 NUBPL iron-transfer P-loop NTPase FIV01_04900 PF00485 Phosphoribulokinase / Uridine kinase family FIV01_04905 PF05170 AsmA family FIV01_04910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FIV01_04910 PF12557 Cob(I)alamin adenosyltransferase N terminal FIV01_04915 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIV01_04930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIV01_04930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIV01_04935 PF00462 Glutaredoxin FIV01_04940 PF01751 Toprim domain FIV01_04940 PF01131 DNA topoisomerase FIV01_04945 PF00106 short chain dehydrogenase FIV01_04950 PF00850 Histone deacetylase domain FIV01_04955 PF00293 NUDIX domain FIV01_04955 PF13344 Haloacid dehalogenase-like hydrolase FIV01_05000 PF00158 Sigma-54 interaction domain FIV01_05000 PF00072 Response regulator receiver domain FIV01_05000 PF02954 Bacterial regulatory protein, Fis family FIV01_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_05005 PF00512 His Kinase A (phospho-acceptor) domain FIV01_05005 PF02743 Cache domain FIV01_05015 PF11893 Domain of unknown function (DUF3413) FIV01_05015 PF00884 Sulfatase FIV01_05020 PF07208 Protein of unknown function (DUF1414) FIV01_05025 PF04245 37-kD nucleoid-associated bacterial protein FIV01_05040 PF13649 Methyltransferase domain FIV01_05045 PF03553 Na+/H+ antiporter family FIV01_05050 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV01_05050 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV01_05055 PF00520 Ion transport protein FIV01_05055 PF00027 Cyclic nucleotide-binding domain FIV01_05060 PF01914 MarC family integral membrane protein FIV01_05065 PF00171 Aldehyde dehydrogenase family FIV01_05065 PF00465 Iron-containing alcohol dehydrogenase FIV01_05070 PF00133 tRNA synthetases class I (I, L, M and V) FIV01_05070 PF09334 tRNA synthetases class I (M) FIV01_05070 PF08264 Anticodon-binding domain of tRNA FIV01_05080 PF03776 Septum formation topological specificity factor MinE FIV01_05085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV01_05090 PF05209 Septum formation inhibitor MinC, N-terminal domain FIV01_05090 PF03775 Septum formation inhibitor MinC, C-terminal domain FIV01_05095 PF05166 YcgL domain FIV01_05100 PF13406 Transglycosylase SLT domain FIV01_05105 PF03692 Putative zinc- or iron-chelating domain FIV01_05115 PF03692 Putative zinc- or iron-chelating domain FIV01_05120 PF02899 Phage integrase, N-terminal SAM-like domain FIV01_05120 PF00589 Phage integrase family FIV01_05130 PF01757 Acyltransferase family FIV01_05135 PF14319 Transposase zinc-binding domain FIV01_05135 PF04986 Putative transposase FIV01_05165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV01_05165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV01_05170 PF04183 IucA / IucC family FIV01_05170 PF06276 Ferric iron reductase FhuF-like transporter FIV01_05180 PF04183 IucA / IucC family FIV01_05180 PF06276 Ferric iron reductase FhuF-like transporter FIV01_05185 PF00206 Lyase FIV01_05185 PF02655 ATP-grasp domain FIV01_05190 PF07715 TonB-dependent Receptor Plug Domain FIV01_05190 PF00593 TonB dependent receptor FIV01_05195 PF00593 TonB dependent receptor FIV01_05195 PF07715 TonB-dependent Receptor Plug Domain FIV01_05195 PF07660 Secretin and TonB N terminus short domain FIV01_05200 PF01497 Periplasmic binding protein FIV01_05205 PF01032 FecCD transport family FIV01_05210 PF01032 FecCD transport family FIV01_05215 PF00005 ABC transporter FIV01_05235 PF04231 Endonuclease I FIV01_05255 PF00107 Zinc-binding dehydrogenase FIV01_05255 PF08240 Alcohol dehydrogenase GroES-like domain FIV01_05270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_05280 PF00245 Alkaline phosphatase FIV01_05295 PF13847 Methyltransferase domain FIV01_05300 PF01263 Aldose 1-epimerase FIV01_05305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV01_05305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV01_05310 PF01641 SelR domain FIV01_05320 PF07023 Protein of unknown function (DUF1315) FIV01_05325 PF02810 SEC-C motif FIV01_05335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV01_05340 PF09190 DALR domain FIV01_05340 PF01406 tRNA synthetases class I (C) catalytic domain FIV01_05345 PF00265 Thymidine kinase FIV01_05350 PF01176 Translation initiation factor 1A / IF-1 FIV01_05355 PF04377 Arginine-tRNA-protein transferase, C terminus FIV01_05355 PF04376 Arginine-tRNA-protein transferase, N terminus FIV01_05360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FIV01_05370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV01_05380 PF01131 DNA topoisomerase FIV01_05380 PF01751 Toprim domain FIV01_05380 PF01396 Topoisomerase DNA binding C4 zinc finger FIV01_05380 PF08272 Topoisomerase I zinc-ribbon-like FIV01_05385 PF00483 Nucleotidyl transferase FIV01_05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_05425 PF04994 TfoX C-terminal domain FIV01_05425 PF04993 TfoX N-terminal domain FIV01_05430 PF00356 Bacterial regulatory proteins, lacI family FIV01_05435 PF02613 Nitrate reductase delta subunit FIV01_05440 PF00072 Response regulator receiver domain FIV01_05440 PF00486 Transcriptional regulatory protein, C terminal FIV01_05445 PF02698 DUF218 domain FIV01_05455 PF17192 MukF middle domain FIV01_05455 PF17193 MukF C-terminal domain FIV01_05455 PF03882 MukF winged-helix domain FIV01_05460 PF04288 MukE-like family FIV01_05465 PF16330 MukB hinge domain FIV01_05465 PF04310 MukB N-terminal FIV01_05480 PF18030 RimK PreATP-grasp domain FIV01_05480 PF08443 RimK-like ATP-grasp domain FIV01_05485 PF08003 Protein of unknown function (DUF1698) FIV01_05490 PF13649 Methyltransferase domain FIV01_05495 PF01904 Protein of unknown function DUF72 FIV01_05500 PF01336 OB-fold nucleic acid binding domain FIV01_05500 PF02938 GAD domain FIV01_05500 PF00152 tRNA synthetases class II (D, K and N) FIV01_05505 PF00849 RNA pseudouridylate synthase FIV01_05510 PF03971 Monomeric isocitrate dehydrogenase FIV01_05515 PF00313 'Cold-shock' DNA-binding domain FIV01_05520 PF02617 ATP-dependent Clp protease adaptor protein ClpS FIV01_05525 PF10431 C-terminal, D2-small domain, of ClpB protein FIV01_05525 PF02861 Clp amino terminal domain, pathogenicity island component FIV01_05525 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_05525 PF07724 AAA domain (Cdc48 subfamily) FIV01_05525 PF17871 AAA lid domain FIV01_05550 PF01226 Formate/nitrite transporter FIV01_05555 PF03649 Uncharacterised protein family (UPF0014) FIV01_05560 PF06796 Periplasmic nitrate reductase protein NapE FIV01_05565 PF03264 NapC/NirT cytochrome c family, N-terminal region FIV01_05570 PF18364 Molybdopterin oxidoreductase N-terminal domain FIV01_05570 PF01568 Molydopterin dinucleotide binding domain FIV01_05570 PF00384 Molybdopterin oxidoreductase FIV01_05585 PF02075 Crossover junction endodeoxyribonuclease RuvC FIV01_05590 PF01330 RuvA N terminal domain FIV01_05590 PF07499 RuvA, C-terminal domain FIV01_05595 PF17864 RuvB AAA lid domain FIV01_05595 PF05491 RuvB C-terminal winged helix domain FIV01_05595 PF05496 Holliday junction DNA helicase RuvB P-loop domain FIV01_05600 PF01654 Cytochrome bd terminal oxidase subunit I FIV01_05605 PF02322 Cytochrome bd terminal oxidase subunit II FIV01_05610 PF08173 Membrane bound YbgT-like protein FIV01_05615 PF03061 Thioesterase superfamily FIV01_05620 PF01618 MotA/TolQ/ExbB proton channel family FIV01_05625 PF02472 Biopolymer transport protein ExbD/TolR FIV01_05635 PF04052 TolB amino-terminal domain FIV01_05635 PF07676 WD40-like Beta Propeller Repeat FIV01_05640 PF00691 OmpA family FIV01_05645 PF13174 Tetratricopeptide repeat FIV01_05645 PF16331 TolA binding protein trimerisation FIV01_05650 PF02445 Quinolinate synthetase A protein FIV01_05655 PF02600 Disulfide bond formation protein DsbB FIV01_05665 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV01_05670 PF00857 Isochorismatase family FIV01_05670 PF00550 Phosphopantetheine attachment site FIV01_05690 PF00089 Trypsin FIV01_05700 PF00089 Trypsin FIV01_05710 PF00512 His Kinase A (phospho-acceptor) domain FIV01_05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_05710 PF00072 Response regulator receiver domain FIV01_05710 PF09308 LuxQ, periplasmic FIV01_05720 PF01238 Phosphomannose isomerase type I FIV01_05730 PF12833 Helix-turn-helix domain FIV01_05735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV01_05740 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV01_05750 PF04055 Radical SAM superfamily FIV01_05760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FIV01_05775 PF05524 PEP-utilising enzyme, N-terminal FIV01_05775 PF00391 PEP-utilising enzyme, mobile domain FIV01_05775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV01_05775 PF00381 PTS HPr component phosphorylation site FIV01_05775 PF02896 PEP-utilising enzyme, TIM barrel domain FIV01_05780 PF03928 Haem-degrading FIV01_05785 PF00294 pfkB family carbohydrate kinase FIV01_05795 PF13391 HNH endonuclease FIV01_05825 PF01867 CRISPR associated protein Cas1 FIV01_05830 PF09827 CRISPR associated protein Cas2 FIV01_05855 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FIV01_05885 PF00672 HAMP domain FIV01_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_05885 PF00512 His Kinase A (phospho-acceptor) domain FIV01_05890 PF00486 Transcriptional regulatory protein, C terminal FIV01_05890 PF00072 Response regulator receiver domain FIV01_05895 PF00535 Glycosyl transferase family 2 FIV01_05900 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FIV01_05910 PF00440 Bacterial regulatory proteins, tetR family FIV01_05910 PF16295 Tetracyclin repressor-like, C-terminal domain FIV01_05915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV01_05915 PF02770 Acyl-CoA dehydrogenase, middle domain FIV01_05915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV01_05915 PF09317 Domain of unknown function (DUF1974) FIV01_05920 PF07055 Enoyl reductase FAD binding domain FIV01_05920 PF12241 Trans-2-enoyl-CoA reductase catalytic region FIV01_05920 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FIV01_05925 PF03372 Endonuclease/Exonuclease/phosphatase family FIV01_05930 PF08007 Cupin superfamily protein FIV01_05935 PF10689 Protein of unknown function (DUF2496) FIV01_05945 PF01925 Sulfite exporter TauE/SafE FIV01_05950 PF13307 Helicase C-terminal domain FIV01_05950 PF06733 DEAD_2 FIV01_05955 PF13609 Gram-negative porin FIV01_05960 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FIV01_05965 PF00202 Aminotransferase class-III FIV01_05970 PF04055 Radical SAM superfamily FIV01_05970 PF06968 Biotin and Thiamin Synthesis associated domain FIV01_05975 PF00155 Aminotransferase class I and II FIV01_05980 PF08241 Methyltransferase domain FIV01_05995 PF01435 Peptidase family M48 FIV01_06005 PF00106 short chain dehydrogenase FIV01_06030 PF16036 Chalcone isomerase-like FIV01_06040 PF08328 Adenylosuccinate lyase C-terminal FIV01_06040 PF00206 Lyase FIV01_06045 PF04356 Protein of unknown function (DUF489) FIV01_06055 PF00294 pfkB family carbohydrate kinase FIV01_06060 PF00816 H-NS histone family FIV01_06065 PF03553 Na+/H+ antiporter family FIV01_06070 PF01634 ATP phosphoribosyltransferase FIV01_06070 PF08029 HisG, C-terminal domain FIV01_06075 PF00815 Histidinol dehydrogenase FIV01_06080 PF00155 Aminotransferase class I and II FIV01_06085 PF00475 Imidazoleglycerol-phosphate dehydratase FIV01_06085 PF08645 Polynucleotide kinase 3 phosphatase FIV01_06090 PF00117 Glutamine amidotransferase class-I FIV01_06095 PF00977 Histidine biosynthesis protein FIV01_06100 PF00977 Histidine biosynthesis protein FIV01_06105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FIV01_06105 PF01502 Phosphoribosyl-AMP cyclohydrolase FIV01_06110 PF12792 CSS motif domain associated with EAL FIV01_06110 PF00563 EAL domain FIV01_06120 PF02833 DHHA2 domain FIV01_06120 PF01368 DHH family FIV01_06135 PF00005 ABC transporter FIV01_06140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_06140 PF00005 ABC transporter FIV01_06145 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_06145 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_06150 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_06155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_06160 PF02954 Bacterial regulatory protein, Fis family FIV01_06160 PF00158 Sigma-54 interaction domain FIV01_06165 PF04012 PspA/IM30 family FIV01_06170 PF06667 Phage shock protein B FIV01_06175 PF04024 PspC domain FIV01_06180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_06180 PF00529 HlyD membrane-fusion protein of T1SS FIV01_06185 PF13533 Biotin-lipoyl like FIV01_06190 PF00873 AcrB/AcrD/AcrF family FIV01_06195 PF03352 Methyladenine glycosylase FIV01_06215 PF03280 Proteobacterial lipase chaperone protein FIV01_06220 PF00561 alpha/beta hydrolase fold FIV01_06225 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV01_06230 PF13396 Phospholipase_D-nuclease N-terminal FIV01_06230 PF13091 PLD-like domain FIV01_06235 PF00209 Sodium:neurotransmitter symporter family FIV01_06240 PF00849 RNA pseudouridylate synthase FIV01_06245 PF10672 S-adenosylmethionine-dependent methyltransferase FIV01_06245 PF17785 PUA-like domain FIV01_06250 PF01066 CDP-alcohol phosphatidyltransferase FIV01_06255 PF00005 ABC transporter FIV01_06260 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_06265 PF13416 Bacterial extracellular solute-binding protein FIV01_06275 PF06945 Protein of unknown function (DUF1289) FIV01_06290 PF03795 YCII-related domain FIV01_06300 PF04279 Intracellular septation protein A FIV01_06315 PF04269 Protein of unknown function, DUF440 FIV01_06320 PF01132 Elongation factor P (EF-P) OB domain FIV01_06320 PF09285 Elongation factor P, C-terminal FIV01_06320 PF08207 Elongation factor P (EF-P) KOW-like domain FIV01_06330 PF00136 DNA polymerase family B FIV01_06330 PF03104 DNA polymerase family B, exonuclease domain FIV01_06345 PF00072 Response regulator receiver domain FIV01_06345 PF00196 Bacterial regulatory proteins, luxR family FIV01_06350 PF08459 UvrC Helix-hairpin-helix N-terminal FIV01_06350 PF02151 UvrB/uvrC motif FIV01_06350 PF01541 GIY-YIG catalytic domain FIV01_06355 PF01066 CDP-alcohol phosphatidyltransferase FIV01_06385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV01_06395 PF07995 Glucose / Sorbosone dehydrogenase FIV01_06400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FIV01_06400 PF01409 tRNA synthetases class II core domain (F) FIV01_06405 PF01588 Putative tRNA binding domain FIV01_06405 PF03483 B3/4 domain FIV01_06405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FIV01_06405 PF03147 Ferredoxin-fold anticodon binding domain FIV01_06405 PF03484 tRNA synthetase B5 domain FIV01_06450 PF00672 HAMP domain FIV01_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_06450 PF00512 His Kinase A (phospho-acceptor) domain FIV01_06455 PF00486 Transcriptional regulatory protein, C terminal FIV01_06455 PF00072 Response regulator receiver domain FIV01_06465 PF04851 Type III restriction enzyme, res subunit FIV01_06465 PF00271 Helicase conserved C-terminal domain FIV01_06470 PF01479 S4 domain FIV01_06470 PF00849 RNA pseudouridylate synthase FIV01_06475 PF07690 Major Facilitator Superfamily FIV01_06490 PF13460 NAD(P)H-binding FIV01_06490 PF11066 Protein of unknown function (DUF2867) FIV01_06495 PF00005 ABC transporter FIV01_06505 PF06965 Na+/H+ antiporter 1 FIV01_06510 PF05736 OprF membrane domain FIV01_06510 PF00691 OmpA family FIV01_06515 PF02321 Outer membrane efflux protein FIV01_06520 PF00583 Acetyltransferase (GNAT) family FIV01_06530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_06535 PF04209 homogentisate 1,2-dioxygenase FIV01_06545 PF02798 Glutathione S-transferase, N-terminal domain FIV01_06545 PF14497 Glutathione S-transferase, C-terminal domain FIV01_06590 PF02913 FAD linked oxidases, C-terminal domain FIV01_06590 PF01565 FAD binding domain FIV01_06590 PF13183 4Fe-4S dicluster domain FIV01_06595 PF04191 Phospholipid methyltransferase FIV01_06615 PF03496 ADP-ribosyltransferase exoenzyme FIV01_06620 PF00221 Aromatic amino acid lyase FIV01_06625 PF01175 Urocanase Rossmann-like domain FIV01_06625 PF17392 Urocanase C-terminal domain FIV01_06625 PF17391 Urocanase N-terminal domain FIV01_06630 PF00491 Arginase family FIV01_06635 PF01979 Amidohydrolase family FIV01_06640 PF07702 UTRA domain FIV01_06640 PF00392 Bacterial regulatory proteins, gntR family FIV01_06645 PF07070 SpoOM protein FIV01_06665 PF05724 Thiopurine S-methyltransferase (TPMT) FIV01_06675 PF01966 HD domain FIV01_06675 PF11871 Domain of unknown function (DUF3391) FIV01_06685 PF04172 LrgB-like family FIV01_06690 PF03788 LrgA family FIV01_06695 PF00929 Exonuclease FIV01_06695 PF08411 Exonuclease C-terminal FIV01_06715 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIV01_06720 PF01032 FecCD transport family FIV01_06735 PF00990 Diguanylate cyclase, GGDEF domain FIV01_06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_06750 PF03466 LysR substrate binding domain FIV01_06760 PF00072 Response regulator receiver domain FIV01_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_06760 PF09308 LuxQ, periplasmic FIV01_06760 PF00512 His Kinase A (phospho-acceptor) domain FIV01_06770 PF01863 Protein of unknown function DUF45 FIV01_06785 PF08386 TAP-like protein FIV01_06785 PF00561 alpha/beta hydrolase fold FIV01_06810 PF04204 Homoserine O-succinyltransferase FIV01_06820 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV01_06825 PF01970 Tripartite tricarboxylate transporter TctA family FIV01_06835 PF03401 Tripartite tricarboxylate transporter family receptor FIV01_06840 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV01_06845 PF00069 Protein kinase domain FIV01_06890 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_06890 PF10431 C-terminal, D2-small domain, of ClpB protein FIV01_06890 PF07724 AAA domain (Cdc48 subfamily) FIV01_06890 PF17871 AAA lid domain FIV01_06945 PF04717 Type VI secretion system, phage-baseplate injector FIV01_06945 PF16671 Actin cross-linking domain FIV01_06975 PF00285 Citrate synthase, C-terminal domain FIV01_06980 PF00330 Aconitase family (aconitate hydratase) FIV01_06980 PF00694 Aconitase C-terminal domain FIV01_06985 PF04303 PrpF protein FIV01_06990 PF13193 AMP-binding enzyme C-terminal domain FIV01_06990 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV01_06990 PF00501 AMP-binding enzyme FIV01_07000 PF04055 Radical SAM superfamily FIV01_07005 PF06508 Queuosine biosynthesis protein QueC FIV01_07015 PF10672 S-adenosylmethionine-dependent methyltransferase FIV01_07015 PF17785 PUA-like domain FIV01_07020 PF00708 Acylphosphatase FIV01_07025 PF04358 DsrC like protein FIV01_07030 PF01027 Inhibitor of apoptosis-promoting Bax1 FIV01_07035 PF00005 ABC transporter FIV01_07040 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_07045 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_07050 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_07055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV01_07055 PF14824 Sirohaem biosynthesis protein central FIV01_07055 PF10414 Sirohaem synthase dimerisation region FIV01_07060 PF04461 Protein of unknown function (DUF520) FIV01_07065 PF00793 DAHP synthetase I family FIV01_07090 PF02470 MlaD protein FIV01_07095 PF04403 Paraquat-inducible protein A FIV01_07100 PF00005 ABC transporter FIV01_07100 PF00664 ABC transporter transmembrane region FIV01_07105 PF13185 GAF domain FIV01_07110 PF04352 ProQ/FINO family FIV01_07110 PF17516 ProQ C-terminal domain FIV01_07115 PF11818 C-terminal domain of tail specific protease (DUF3340) FIV01_07115 PF00595 PDZ domain FIV01_07115 PF03572 Peptidase family S41 FIV01_07115 PF17804 Tail specific protease N-terminal domain FIV01_07125 PF11940 Domain of unknown function (DUF3458) Ig-like fold FIV01_07125 PF01433 Peptidase family M1 domain FIV01_07125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FIV01_07130 PF05088 Bacterial NAD-glutamate dehydrogenase FIV01_07135 PF01180 Dihydroorotate dehydrogenase FIV01_07140 PF07126 Cell-division protein ZapC FIV01_07145 PF01170 Putative RNA methylase family UPF0020 FIV01_07145 PF02926 THUMP domain FIV01_07145 PF10672 S-adenosylmethionine-dependent methyltransferase FIV01_07155 PF16326 ABC transporter C-terminal domain FIV01_07155 PF00005 ABC transporter FIV01_07155 PF12848 ABC transporter FIV01_07165 PF04957 Ribosome modulation factor FIV01_07170 PF07977 FabA-like domain FIV01_07175 PF13654 AAA domain FIV01_07175 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV01_07180 PF17414 MatP C-terminal ribbon-helix-helix domain FIV01_07180 PF06303 MatP N-terminal domain FIV01_07230 PF03625 Domain of unknown function DUF302 FIV01_07230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FIV01_07290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_07290 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV01_07290 PF18269 T3SS EscN ATPase C-terminal domain FIV01_07295 PF00771 FHIPEP family FIV01_07325 PF01514 Secretory protein of YscJ/FliF family FIV01_07345 PF12833 Helix-turn-helix domain FIV01_07365 PF04888 Secretion system effector C (SseC) like family FIV01_07410 PF00512 His Kinase A (phospho-acceptor) domain FIV01_07410 PF01627 Hpt domain FIV01_07410 PF00072 Response regulator receiver domain FIV01_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_07410 PF00672 HAMP domain FIV01_07410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_07415 PF00196 Bacterial regulatory proteins, luxR family FIV01_07415 PF00072 Response regulator receiver domain FIV01_07420 PF01312 FlhB HrpN YscU SpaS Family FIV01_07425 PF01311 Bacterial export proteins, family 1 FIV01_07430 PF01313 Bacterial export proteins, family 3 FIV01_07435 PF00813 FliP family FIV01_07445 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV01_07460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV01_07460 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV01_07470 PF00403 Heavy-metal-associated domain FIV01_07485 PF13545 Crp-like helix-turn-helix domain FIV01_07485 PF00027 Cyclic nucleotide-binding domain FIV01_07490 PF00582 Universal stress protein family FIV01_07495 PF01171 PP-loop family FIV01_07515 PF00005 ABC transporter FIV01_07515 PF08402 TOBE domain FIV01_07520 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_07525 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_07530 PF13416 Bacterial extracellular solute-binding protein FIV01_07535 PF02146 Sir2 family FIV01_07540 PF00672 HAMP domain FIV01_07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_07545 PF01551 Peptidase family M23 FIV01_07555 PF02913 FAD linked oxidases, C-terminal domain FIV01_07555 PF01565 FAD binding domain FIV01_07560 PF01645 Conserved region in glutamate synthase FIV01_07570 PF04909 Amidohydrolase FIV01_07575 PF13378 Enolase C-terminal domain-like FIV01_07575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV01_07580 PF00596 Class II Aldolase and Adducin N-terminal domain FIV01_07590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_07595 PF01037 Lrp/AsnC ligand binding domain FIV01_07600 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_07605 PF01327 Polypeptide deformylase FIV01_07640 PF12848 ABC transporter FIV01_07640 PF00005 ABC transporter FIV01_07650 PF08281 Sigma-70, region 4 FIV01_07650 PF04542 Sigma-70 region 2 FIV01_07665 PF12804 MobA-like NTP transferase domain FIV01_07680 PF00691 OmpA family FIV01_07680 PF01389 OmpA-like transmembrane domain FIV01_07690 PF00480 ROK family FIV01_07705 PF00877 NlpC/P60 family FIV01_07725 PF01554 MatE FIV01_07735 PF01068 ATP dependent DNA ligase domain FIV01_07735 PF14743 DNA ligase OB-like domain FIV01_07740 PF02397 Bacterial sugar transferase FIV01_07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_07795 PF00672 HAMP domain FIV01_07810 PF00012 Hsp70 protein FIV01_07815 PF00012 Hsp70 protein FIV01_07825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_07830 PF04229 GrpB protein FIV01_07855 PF06629 MltA-interacting protein MipA FIV01_07860 PF00512 His Kinase A (phospho-acceptor) domain FIV01_07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_07860 PF00672 HAMP domain FIV01_07865 PF00486 Transcriptional regulatory protein, C terminal FIV01_07865 PF00072 Response regulator receiver domain FIV01_07880 PF00990 Diguanylate cyclase, GGDEF domain FIV01_07880 PF17151 Periplasmic sensor domain FIV01_07920 PF02472 Biopolymer transport protein ExbD/TolR FIV01_07925 PF01618 MotA/TolQ/ExbB proton channel family FIV01_07930 PF01618 MotA/TolQ/ExbB proton channel family FIV01_07940 PF00753 Metallo-beta-lactamase superfamily FIV01_07945 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV01_07955 PF01259 SAICAR synthetase FIV01_08020 PF04055 Radical SAM superfamily FIV01_08025 PF11230 Protein of unknown function (DUF3029) FIV01_08030 PF17200 Single Cache domain 2 FIV01_08030 PF00672 HAMP domain FIV01_08030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_08035 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV01_08035 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV01_08045 PF02867 Ribonucleotide reductase, barrel domain FIV01_08045 PF00317 Ribonucleotide reductase, all-alpha domain FIV01_08045 PF03477 ATP cone domain FIV01_08050 PF00268 Ribonucleotide reductase, small chain FIV01_08065 PF00994 Probable molybdopterin binding domain FIV01_08075 PF03475 3-alpha domain FIV01_08075 PF03473 MOSC domain FIV01_08085 PF00117 Glutamine amidotransferase class-I FIV01_08095 PF00657 GDSL-like Lipase/Acylhydrolase FIV01_08105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV01_08110 PF03435 Saccharopine dehydrogenase NADP binding domain FIV01_08110 PF16653 Saccharopine dehydrogenase C-terminal domain FIV01_08115 PF00202 Aminotransferase class-III FIV01_08135 PF00583 Acetyltransferase (GNAT) family FIV01_08155 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FIV01_08170 PF08274 PhnA Zinc-Ribbon FIV01_08170 PF03831 PhnA domain FIV01_08200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV01_08200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV01_08215 PF00210 Ferritin-like domain FIV01_08240 PF00753 Metallo-beta-lactamase superfamily FIV01_08245 PF05951 Bacterial protein of unknown function (DUF882) FIV01_08250 PF03734 L,D-transpeptidase catalytic domain FIV01_08250 PF01471 Putative peptidoglycan binding domain FIV01_08275 PF00925 GTP cyclohydrolase II FIV01_08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_08290 PF03466 LysR substrate binding domain FIV01_08295 PF13533 Biotin-lipoyl like FIV01_08300 PF07690 Major Facilitator Superfamily FIV01_08305 PF01327 Polypeptide deformylase FIV01_08315 PF03707 Bacterial signalling protein N terminal repeat FIV01_08315 PF00563 EAL domain FIV01_08315 PF00990 Diguanylate cyclase, GGDEF domain FIV01_08340 PF01235 Sodium:alanine symporter family FIV01_08350 PF00857 Isochorismatase family FIV01_08360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FIV01_08360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FIV01_08365 PF01810 LysE type translocator FIV01_08370 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FIV01_08375 PF13276 HTH-like domain FIV01_08375 PF00665 Integrase core domain FIV01_08405 PF02028 BCCT, betaine/carnitine/choline family transporter FIV01_08415 PF00171 Aldehyde dehydrogenase family FIV01_08430 PF01081 KDPG and KHG aldolase FIV01_08440 PF01565 FAD binding domain FIV01_08440 PF09330 D-lactate dehydrogenase, membrane binding FIV01_08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_08445 PF03466 LysR substrate binding domain FIV01_08450 PF01554 MatE FIV01_08505 PF01797 Transposase IS200 like FIV01_08530 PF01386 Ribosomal L25p family FIV01_08535 PF13340 Putative transposase of IS4/5 family (DUF4096) FIV01_08570 PF00326 Prolyl oligopeptidase family FIV01_08570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FIV01_08585 PF13302 Acetyltransferase (GNAT) domain FIV01_08590 PF18024 Helix-turn-helix domain FIV01_08590 PF00158 Sigma-54 interaction domain FIV01_08595 PF05128 Domain of unknown function (DUF697) FIV01_08600 PF04317 YcjX-like family, DUF463 FIV01_08615 PF00425 chorismate binding enzyme FIV01_08615 PF04715 Anthranilate synthase component I, N terminal region FIV01_08625 PF00293 NUDIX domain FIV01_08630 PF03222 Tryptophan/tyrosine permease family FIV01_08635 PF03313 Serine dehydratase alpha chain FIV01_08635 PF03315 Serine dehydratase beta chain FIV01_08640 PF03222 Tryptophan/tyrosine permease family FIV01_08655 PF01242 6-pyruvoyl tetrahydropterin synthase FIV01_08660 PF00152 tRNA synthetases class II (D, K and N) FIV01_08660 PF01336 OB-fold nucleic acid binding domain FIV01_08675 PF00155 Aminotransferase class I and II FIV01_08675 PF00392 Bacterial regulatory proteins, gntR family FIV01_08680 PF01966 HD domain FIV01_08680 PF00672 HAMP domain FIV01_08685 PF00155 Aminotransferase class I and II FIV01_08695 PF00271 Helicase conserved C-terminal domain FIV01_08695 PF04408 Helicase associated domain (HA2) FIV01_08695 PF08482 ATP-dependent helicase C-terminal FIV01_08695 PF00270 DEAD/DEAH box helicase FIV01_08700 PF03949 Malic enzyme, NAD binding domain FIV01_08700 PF00390 Malic enzyme, N-terminal domain FIV01_08710 PF02698 DUF218 domain FIV01_08725 PF05193 Peptidase M16 inactive domain FIV01_08725 PF00675 Insulinase (Peptidase family M16) FIV01_08740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FIV01_08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_08750 PF00005 ABC transporter FIV01_08750 PF00664 ABC transporter transmembrane region FIV01_08755 PF00005 ABC transporter FIV01_08755 PF00664 ABC transporter transmembrane region FIV01_08760 PF02567 Phenazine biosynthesis-like protein FIV01_08765 PF00849 RNA pseudouridylate synthase FIV01_08765 PF01479 S4 domain FIV01_08770 PF00563 EAL domain FIV01_08770 PF03707 Bacterial signalling protein N terminal repeat FIV01_08770 PF00990 Diguanylate cyclase, GGDEF domain FIV01_08785 PF01300 Telomere recombination FIV01_08790 PF02811 PHP domain FIV01_08800 PF04715 Anthranilate synthase component I, N terminal region FIV01_08800 PF00425 chorismate binding enzyme FIV01_08805 PF00117 Glutamine amidotransferase class-I FIV01_08810 PF02885 Glycosyl transferase family, helical bundle domain FIV01_08810 PF00591 Glycosyl transferase family, a/b domain FIV01_08815 PF00218 Indole-3-glycerol phosphate synthase FIV01_08815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FIV01_08820 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_08830 PF01527 Transposase FIV01_08850 PF00892 EamA-like transporter family FIV01_08860 PF00270 DEAD/DEAH box helicase FIV01_08860 PF00271 Helicase conserved C-terminal domain FIV01_08860 PF04408 Helicase associated domain (HA2) FIV01_08860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FIV01_08860 PF11898 Domain of unknown function (DUF3418) FIV01_08885 PF01510 N-acetylmuramoyl-L-alanine amidase FIV01_08890 PF01494 FAD binding domain FIV01_08920 PF01323 DSBA-like thioredoxin domain FIV01_08925 PF03466 LysR substrate binding domain FIV01_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_08955 PF01047 MarR family FIV01_08960 PF08267 Cobalamin-independent synthase, N-terminal domain FIV01_08960 PF01717 Cobalamin-independent synthase, Catalytic domain FIV01_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_08965 PF03466 LysR substrate binding domain FIV01_08980 PF00990 Diguanylate cyclase, GGDEF domain FIV01_08980 PF00563 EAL domain FIV01_08980 PF08447 PAS fold FIV01_08980 PF08448 PAS fold FIV01_08985 PF11842 Domain of unknown function (DUF3362) FIV01_08985 PF08497 Radical SAM N-terminal FIV01_08985 PF04055 Radical SAM superfamily FIV01_08990 PF00266 Aminotransferase class-V FIV01_09005 PF04993 TfoX N-terminal domain FIV01_09005 PF04994 TfoX C-terminal domain FIV01_09015 PF03956 Lysine exporter LysO FIV01_09025 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV01_09030 PF01380 SIS domain FIV01_09030 PF01418 Helix-turn-helix domain, rpiR family FIV01_09035 PF00462 Glutaredoxin FIV01_09040 PF06826 Predicted Permease Membrane Region FIV01_09040 PF02080 TrkA-C domain FIV01_09045 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_09050 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_09055 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_09060 PF00005 ABC transporter FIV01_09070 PF02901 Pyruvate formate lyase-like FIV01_09070 PF01228 Glycine radical FIV01_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_09080 PF00672 HAMP domain FIV01_09085 PF04055 Radical SAM superfamily FIV01_09110 PF03887 YfbU domain FIV01_09115 PF08298 PrkA AAA domain FIV01_09115 PF06798 PrkA serine protein kinase C-terminal domain FIV01_09120 PF04285 Protein of unknown function (DUF444) FIV01_09125 PF04293 SpoVR like protein FIV01_09135 PF02348 Cytidylyltransferase FIV01_09140 PF03966 Trm112p-like protein FIV01_09145 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FIV01_09150 PF00005 ABC transporter FIV01_09150 PF00664 ABC transporter transmembrane region FIV01_09155 PF03772 Competence protein FIV01_09155 PF00753 Metallo-beta-lactamase superfamily FIV01_09165 PF02687 FtsX-like permease family FIV01_09165 PF12704 MacB-like periplasmic core domain FIV01_09170 PF00005 ABC transporter FIV01_09175 PF12704 MacB-like periplasmic core domain FIV01_09175 PF02687 FtsX-like permease family FIV01_09185 PF17757 UvrB interaction domain FIV01_09185 PF03461 TRCF domain FIV01_09185 PF00271 Helicase conserved C-terminal domain FIV01_09185 PF00270 DEAD/DEAH box helicase FIV01_09185 PF02559 CarD-like/TRCF domain FIV01_09220 PF02798 Glutathione S-transferase, N-terminal domain FIV01_09220 PF00043 Glutathione S-transferase, C-terminal domain FIV01_09230 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_09240 PF04185 Phosphoesterase family FIV01_09240 PF05506 Domain of unknown function (DUF756) FIV01_09245 PF02028 BCCT, betaine/carnitine/choline family transporter FIV01_09260 PF01679 Proteolipid membrane potential modulator FIV01_09270 PF05728 Uncharacterised protein family (UPF0227) FIV01_09280 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FIV01_09280 PF13036 Peptidoglycan-synthase activator LpoB FIV01_09295 PF01230 HIT domain FIV01_09305 PF00392 Bacterial regulatory proteins, gntR family FIV01_09305 PF07840 FadR C-terminal domain FIV01_09310 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FIV01_09315 PF02600 Disulfide bond formation protein DsbB FIV01_09320 PF01580 FtsK/SpoIIIE family FIV01_09320 PF09397 Ftsk gamma domain FIV01_09320 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FIV01_09320 PF17854 FtsK alpha domain FIV01_09325 PF01037 Lrp/AsnC ligand binding domain FIV01_09330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV01_09330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV01_09335 PF04217 Protein of unknown function, DUF412 FIV01_09340 PF00871 Acetokinase family FIV01_09345 PF07085 DRTGG domain FIV01_09345 PF01515 Phosphate acetyl/butaryl transferase FIV01_09350 PF13409 Glutathione S-transferase, N-terminal domain FIV01_09355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_09355 PF00005 ABC transporter FIV01_09360 PF00005 ABC transporter FIV01_09360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_09365 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_09365 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_09370 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_09375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_09385 PF00672 HAMP domain FIV01_09385 PF02743 Cache domain FIV01_09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_09390 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_09390 PF04389 Peptidase family M28 FIV01_09395 PF02868 Thermolysin metallopeptidase, alpha-helical domain FIV01_09395 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_09395 PF07504 Fungalysin/Thermolysin Propeptide Motif FIV01_09395 PF01447 Thermolysin metallopeptidase, catalytic domain FIV01_09395 PF03413 Peptidase propeptide and YPEB domain FIV01_09400 PF00672 HAMP domain FIV01_09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_09400 PF17200 Single Cache domain 2 FIV01_09410 PF02687 FtsX-like permease family FIV01_09410 PF12704 MacB-like periplasmic core domain FIV01_09410 PF00005 ABC transporter FIV01_09415 PF00005 ABC transporter FIV01_09415 PF02687 FtsX-like permease family FIV01_09415 PF12704 MacB-like periplasmic core domain FIV01_09420 PF00005 ABC transporter FIV01_09420 PF12704 MacB-like periplasmic core domain FIV01_09420 PF02687 FtsX-like permease family FIV01_09430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_09435 PF03413 Peptidase propeptide and YPEB domain FIV01_09435 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_09435 PF02868 Thermolysin metallopeptidase, alpha-helical domain FIV01_09435 PF07504 Fungalysin/Thermolysin Propeptide Motif FIV01_09435 PF01447 Thermolysin metallopeptidase, catalytic domain FIV01_09465 PF00171 Aldehyde dehydrogenase family FIV01_09475 PF00202 Aminotransferase class-III FIV01_09480 PF00392 Bacterial regulatory proteins, gntR family FIV01_09480 PF00155 Aminotransferase class I and II FIV01_09485 PF01235 Sodium:alanine symporter family FIV01_09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_09490 PF00512 His Kinase A (phospho-acceptor) domain FIV01_09495 PF01590 GAF domain FIV01_09495 PF00360 Phytochrome region FIV01_09495 PF00990 Diguanylate cyclase, GGDEF domain FIV01_09495 PF00563 EAL domain FIV01_09500 PF00005 ABC transporter FIV01_09500 PF16326 ABC transporter C-terminal domain FIV01_09500 PF12848 ABC transporter FIV01_09525 PF01566 Natural resistance-associated macrophage protein FIV01_09550 PF04717 Type VI secretion system, phage-baseplate injector FIV01_09605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV01_09615 PF13404 AsnC-type helix-turn-helix domain FIV01_09615 PF01037 Lrp/AsnC ligand binding domain FIV01_09620 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_09635 PF07690 Major Facilitator Superfamily FIV01_09640 PF03601 Conserved hypothetical protein 698 FIV01_09650 PF00392 Bacterial regulatory proteins, gntR family FIV01_09650 PF07702 UTRA domain FIV01_09655 PF00501 AMP-binding enzyme FIV01_09655 PF13193 AMP-binding enzyme C-terminal domain FIV01_09660 PF13378 Enolase C-terminal domain-like FIV01_09665 PF00378 Enoyl-CoA hydratase/isomerase FIV01_09670 PF12697 Alpha/beta hydrolase family FIV01_09675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV01_09675 PF16582 Middle domain of thiamine pyrophosphate FIV01_09675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV01_09680 PF00425 chorismate binding enzyme FIV01_09685 PF00155 Aminotransferase class I and II FIV01_09700 PF02743 Cache domain FIV01_09700 PF00672 HAMP domain FIV01_09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_09720 PF01966 HD domain FIV01_09720 PF13286 Phosphohydrolase-associated domain FIV01_09725 PF00962 Adenosine/AMP deaminase FIV01_09740 PF00270 DEAD/DEAH box helicase FIV01_09740 PF00271 Helicase conserved C-terminal domain FIV01_09750 PF01343 Peptidase family S49 FIV01_09750 PF08496 Peptidase family S49 N-terminal FIV01_09755 PF00106 short chain dehydrogenase FIV01_09770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV01_09770 PF14579 Helix-hairpin-helix motif FIV01_09770 PF02811 PHP domain FIV01_09770 PF01336 OB-fold nucleic acid binding domain FIV01_09770 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV01_09775 PF00072 Response regulator receiver domain FIV01_09775 PF01584 CheW-like domain FIV01_09780 PF00480 ROK family FIV01_09785 PF02887 Pyruvate kinase, alpha/beta domain FIV01_09785 PF00224 Pyruvate kinase, barrel domain FIV01_09790 PF01734 Patatin-like phospholipase FIV01_09805 PF00209 Sodium:neurotransmitter symporter family FIV01_09825 PF00367 phosphotransferase system, EIIB FIV01_09825 PF02378 Phosphotransferase system, EIIC FIV01_09825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV01_09830 PF01026 TatD related DNase FIV01_09835 PF09115 DNA polymerase III, delta subunit, C terminal FIV01_09840 PF02223 Thymidylate kinase FIV01_09845 PF02618 YceG-like family FIV01_09850 PF01063 Amino-transferase class IV FIV01_09855 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV01_09855 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV01_09860 PF00550 Phosphopantetheine attachment site FIV01_09870 PF00698 Acyl transferase domain FIV01_09875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV01_09875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV01_09880 PF02504 Fatty acid synthesis protein FIV01_09890 PF02620 Large ribosomal RNA subunit accumulation protein YceD FIV01_09895 PF02545 Maf-like protein FIV01_09900 PF01479 S4 domain FIV01_09900 PF00849 RNA pseudouridylate synthase FIV01_09910 PF00575 S1 RNA binding domain FIV01_09910 PF10150 Ribonuclease E/G family FIV01_09910 PF12111 Polyribonucleotide phosphorylase C terminal FIV01_09915 PF00916 Sulfate permease family FIV01_09915 PF01740 STAS domain FIV01_09920 PF01612 3'-5' exonuclease FIV01_09920 PF00570 HRDC domain FIV01_09930 PF00501 AMP-binding enzyme FIV01_09930 PF13193 AMP-binding enzyme C-terminal domain FIV01_09935 PF00561 alpha/beta hydrolase fold FIV01_09950 PF00814 Glycoprotease family FIV01_09955 PF04851 Type III restriction enzyme, res subunit FIV01_09955 PF13307 Helicase C-terminal domain FIV01_09965 PF01842 ACT domain FIV01_09965 PF00551 Formyl transferase FIV01_09970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV01_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_09975 PF01343 Peptidase family S49 FIV01_09980 PF07690 Major Facilitator Superfamily FIV01_09985 PF01627 Hpt domain FIV01_09985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_09985 PF00512 His Kinase A (phospho-acceptor) domain FIV01_09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_09985 PF00672 HAMP domain FIV01_09985 PF00072 Response regulator receiver domain FIV01_09990 PF04960 Glutaminase FIV01_09995 PF17763 Glutaminase/Asparaginase C-terminal domain FIV01_09995 PF00710 Asparaginase, N-terminal FIV01_10000 PF00171 Aldehyde dehydrogenase family FIV01_10015 PF16925 Tetracyclin repressor-like, C-terminal domain FIV01_10015 PF00440 Bacterial regulatory proteins, tetR family FIV01_10020 PF02403 Seryl-tRNA synthetase N-terminal domain FIV01_10020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV01_10025 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_10025 PF16193 AAA C-terminal domain FIV01_10025 PF12002 MgsA AAA+ ATPase C terminal FIV01_10030 PF03548 Outer membrane lipoprotein carrier protein LolA FIV01_10035 PF07517 SecA DEAD-like domain FIV01_10035 PF01043 SecA preprotein cross-linking domain FIV01_10035 PF02810 SEC-C motif FIV01_10035 PF07516 SecA Wing and Scaffold domain FIV01_10040 PF01207 Dihydrouridine synthase (Dus) FIV01_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_10060 PF03466 LysR substrate binding domain FIV01_10070 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FIV01_10075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FIV01_10080 PF18073 Rubredoxin metal binding domain FIV01_10085 PF06305 Lipopolysaccharide assembly protein A domain FIV01_10090 PF00216 Bacterial DNA-binding protein FIV01_10095 PF00575 S1 RNA binding domain FIV01_10100 PF02224 Cytidylate kinase FIV01_10110 PF13145 PPIC-type PPIASE domain FIV01_10115 PF00216 Bacterial DNA-binding protein FIV01_10120 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_10120 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV01_10120 PF02190 ATP-dependent protease La (LON) substrate-binding domain FIV01_10125 PF07724 AAA domain (Cdc48 subfamily) FIV01_10125 PF10431 C-terminal, D2-small domain, of ClpB protein FIV01_10125 PF06689 ClpX C4-type zinc finger FIV01_10130 PF00574 Clp protease FIV01_10135 PF05698 Bacterial trigger factor protein (TF) C-terminus FIV01_10135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_10135 PF05697 Bacterial trigger factor protein (TF) FIV01_10145 PF12262 Bacterial virulence factor lipase N-terminal FIV01_10150 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV01_10160 PF04632 Fusaric acid resistance protein family FIV01_10175 PF00873 AcrB/AcrD/AcrF family FIV01_10180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_10200 PF00551 Formyl transferase FIV01_10210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_10210 PF17806 Sarcosine oxidase A3 domain FIV01_10210 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV01_10210 PF01571 Aminomethyltransferase folate-binding domain FIV01_10215 PF04267 Sarcosine oxidase, delta subunit family FIV01_10220 PF01266 FAD dependent oxidoreductase FIV01_10225 PF00464 Serine hydroxymethyltransferase FIV01_10240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FIV01_10240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FIV01_10255 PF00909 Ammonium Transporter Family FIV01_10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_10260 PF00672 HAMP domain FIV01_10265 PF02132 RecR protein FIV01_10265 PF13662 Toprim domain FIV01_10270 PF02575 YbaB/EbfC DNA-binding family FIV01_10275 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FIV01_10275 PF12169 DNA polymerase III subunits gamma and tau domain III FIV01_10275 PF12170 DNA polymerase III tau subunit V interacting with alpha FIV01_10280 PF00156 Phosphoribosyl transferase domain FIV01_10290 PF00072 Response regulator receiver domain FIV01_10295 PF03466 LysR substrate binding domain FIV01_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_10300 PF00881 Nitroreductase family FIV01_10305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV01_10305 PF00378 Enoyl-CoA hydratase/isomerase FIV01_10305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV01_10310 PF00108 Thiolase, N-terminal domain FIV01_10310 PF02803 Thiolase, C-terminal domain FIV01_10315 PF04542 Sigma-70 region 2 FIV01_10315 PF08281 Sigma-70, region 4 FIV01_10325 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV01_10330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FIV01_10335 PF04333 MlaA lipoprotein FIV01_10345 PF03918 Cytochrome C biogenesis protein FIV01_10350 PF08534 Redoxin FIV01_10355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FIV01_10355 PF01578 Cytochrome C assembly protein FIV01_10360 PF03100 CcmE FIV01_10370 PF01578 Cytochrome C assembly protein FIV01_10375 PF03379 CcmB protein FIV01_10380 PF00005 ABC transporter FIV01_10390 PF01584 CheW-like domain FIV01_10400 PF13614 AAA domain FIV01_10405 PF00072 Response regulator receiver domain FIV01_10405 PF01339 CheB methylesterase FIV01_10410 PF01627 Hpt domain FIV01_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_10410 PF02895 Signal transducing histidine kinase, homodimeric domain FIV01_10410 PF01584 CheW-like domain FIV01_10410 PF07194 P2 response regulator binding domain FIV01_10415 PF04344 Chemotaxis phosphatase, CheZ FIV01_10420 PF00072 Response regulator receiver domain FIV01_10425 PF04539 Sigma-70 region 3 FIV01_10425 PF04545 Sigma-70, region 4 FIV01_10425 PF04542 Sigma-70 region 2 FIV01_10430 PF10609 NUBPL iron-transfer P-loop NTPase FIV01_10435 PF00448 SRP54-type protein, GTPase domain FIV01_10440 PF00771 FHIPEP family FIV01_10445 PF00300 Histidine phosphatase superfamily (branch 1) FIV01_10450 PF16187 Middle or third domain of peptidase_M16 FIV01_10450 PF00675 Insulinase (Peptidase family M16) FIV01_10450 PF05193 Peptidase M16 inactive domain FIV01_10455 PF06185 YecM protein FIV01_10460 PF05746 DALR anticodon binding domain FIV01_10460 PF03485 Arginyl tRNA synthetase N terminal domain FIV01_10460 PF00750 tRNA synthetases class I (R) FIV01_10475 PF07664 Ferrous iron transport protein B C terminus FIV01_10475 PF02421 Ferrous iron transport protein B FIV01_10475 PF07670 Nucleoside recognition FIV01_10480 PF04023 FeoA domain FIV01_10485 PF02311 AraC-like ligand binding domain FIV01_10485 PF12833 Helix-turn-helix domain FIV01_10490 PF01297 Zinc-uptake complex component A periplasmic FIV01_10495 PF00005 ABC transporter FIV01_10500 PF00950 ABC 3 transport family FIV01_10505 PF00156 Phosphoribosyl transferase domain FIV01_10510 PF02674 Colicin V production protein FIV01_10515 PF05036 Sporulation related domain FIV01_10520 PF08245 Mur ligase middle domain FIV01_10520 PF02875 Mur ligase family, glutamate ligase domain FIV01_10525 PF17848 Acetyl-coA carboxylase zinc finger domain FIV01_10525 PF01039 Carboxyl transferase domain FIV01_10530 PF01416 tRNA pseudouridine synthase FIV01_10540 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV01_10540 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV01_10545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV01_10545 PF11890 Domain of unknown function (DUF3410) FIV01_10545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV01_10550 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV01_10550 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV01_10555 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIV01_10555 PF01266 FAD dependent oxidoreductase FIV01_10565 PF08891 YfcL protein FIV01_10580 PF04315 Elongation factor P hydroxylase FIV01_10585 PF03458 UPF0126 domain FIV01_10590 PF01264 Chorismate synthase FIV01_10595 PF05175 Methyltransferase small domain FIV01_10600 PF01713 Smr domain FIV01_10605 PF01312 FlhB HrpN YscU SpaS Family FIV01_10610 PF01311 Bacterial export proteins, family 1 FIV01_10615 PF01313 Bacterial export proteins, family 3 FIV01_10620 PF00813 FliP family FIV01_10625 PF04347 Flagellar biosynthesis protein, FliO FIV01_10630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV01_10635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV01_10635 PF02154 Flagellar motor switch protein FliM FIV01_10655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_10655 PF18269 T3SS EscN ATPase C-terminal domain FIV01_10665 PF14841 FliG middle domain FIV01_10665 PF14842 FliG N-terminal domain FIV01_10665 PF01706 FliG C-terminal domain FIV01_10670 PF08345 Flagellar M-ring protein C-terminal FIV01_10670 PF01514 Secretory protein of YscJ/FliF family FIV01_10675 PF02049 Flagellar hook-basal body complex protein FliE FIV01_10680 PF02954 Bacterial regulatory protein, Fis family FIV01_10680 PF00158 Sigma-54 interaction domain FIV01_10680 PF00072 Response regulator receiver domain FIV01_10685 PF00512 His Kinase A (phospho-acceptor) domain FIV01_10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_10690 PF00158 Sigma-54 interaction domain FIV01_10690 PF00072 Response regulator receiver domain FIV01_10690 PF02954 Bacterial regulatory protein, Fis family FIV01_10695 PF02561 Flagellar protein FliS FIV01_10705 PF02465 Flagellar hook-associated protein 2 N-terminus FIV01_10705 PF07195 Flagellar hook-associated protein 2 C-terminus FIV01_10705 PF07196 Flagellin hook IN motif FIV01_10710 PF03646 FlaG protein FIV01_10715 PF00700 Bacterial flagellin C-terminal helical region FIV01_10715 PF07196 Flagellin hook IN motif FIV01_10715 PF00669 Bacterial flagellin N-terminal helical region FIV01_10720 PF07196 Flagellin hook IN motif FIV01_10720 PF00700 Bacterial flagellin C-terminal helical region FIV01_10720 PF00669 Bacterial flagellin N-terminal helical region FIV01_10725 PF00669 Bacterial flagellin N-terminal helical region FIV01_10725 PF07196 Flagellin hook IN motif FIV01_10725 PF00700 Bacterial flagellin C-terminal helical region FIV01_10735 PF04261 Dyp-type peroxidase family FIV01_10740 PF11143 Protein of unknown function (DUF2919) FIV01_10760 PF03960 ArsC family FIV01_10765 PF01546 Peptidase family M20/M25/M40 FIV01_10765 PF07687 Peptidase dimerisation domain FIV01_10770 PF02557 D-alanyl-D-alanine carboxypeptidase FIV01_10780 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FIV01_10785 PF07348 Syd protein (SUKH-2) FIV01_10795 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FIV01_10795 PF03641 Possible lysine decarboxylase FIV01_10795 PF11892 Domain of unknown function (DUF3412) FIV01_10800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIV01_10800 PF01367 5'-3' exonuclease, C-terminal SAM fold FIV01_10810 PF04241 Protein of unknown function (DUF423) FIV01_10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_10820 PF03466 LysR substrate binding domain FIV01_10830 PF02568 Thiamine biosynthesis protein (ThiI) FIV01_10830 PF02926 THUMP domain FIV01_10835 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV01_10835 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV01_10835 PF00691 OmpA family FIV01_10835 PF00691 OmpA family FIV01_10840 PF01618 MotA/TolQ/ExbB proton channel family FIV01_10850 PF00348 Polyprenyl synthetase FIV01_10855 PF02780 Transketolase, C-terminal domain FIV01_10855 PF02779 Transketolase, pyrimidine binding domain FIV01_10855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FIV01_10860 PF00849 RNA pseudouridylate synthase FIV01_10865 PF04287 tRNA pseudouridine synthase C FIV01_10890 PF02629 CoA binding domain FIV01_10890 PF00549 CoA-ligase FIV01_10895 PF00549 CoA-ligase FIV01_10895 PF08442 ATP-grasp domain FIV01_10900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV01_10900 PF02817 e3 binding domain FIV01_10900 PF00364 Biotin-requiring enzyme FIV01_10905 PF16078 2-oxoglutarate dehydrogenase N-terminus FIV01_10905 PF16870 2-oxoglutarate dehydrogenase C-terminal FIV01_10905 PF02779 Transketolase, pyrimidine binding domain FIV01_10905 PF00676 Dehydrogenase E1 component FIV01_10910 PF13085 2Fe-2S iron-sulfur cluster binding domain FIV01_10915 PF00890 FAD binding domain FIV01_10915 PF02910 Fumarate reductase flavoprotein C-term FIV01_10920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIV01_10925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIV01_10930 PF00285 Citrate synthase, C-terminal domain FIV01_10935 PF01784 NIF3 (NGG1p interacting factor 3) FIV01_10945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV01_10945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV01_10945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV01_10945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV01_10950 PF17206 SeqA protein N-terminal domain FIV01_10950 PF03925 SeqA protein C-terminal domain FIV01_10955 PF12697 Alpha/beta hydrolase family FIV01_10965 PF00258 Flavodoxin FIV01_10975 PF01475 Ferric uptake regulator family FIV01_10980 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV01_10980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FIV01_10985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FIV01_10985 PF02378 Phosphotransferase system, EIIC FIV01_10985 PF00367 phosphotransferase system, EIIB FIV01_10990 PF01979 Amidohydrolase family FIV01_10995 PF00480 ROK family FIV01_10995 PF01047 MarR family FIV01_11000 PF00999 Sodium/hydrogen exchanger family FIV01_11005 PF13537 Glutamine amidotransferase domain FIV01_11005 PF00733 Asparagine synthase FIV01_11010 PF00854 POT family FIV01_11015 PF02838 Glycosyl hydrolase family 20, domain 2 FIV01_11015 PF00728 Glycosyl hydrolase family 20, catalytic domain FIV01_11015 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FIV01_11015 PF03173 Putative carbohydrate binding domain FIV01_11030 PF01713 Smr domain FIV01_11035 PF01479 S4 domain FIV01_11035 PF00849 RNA pseudouridylate synthase FIV01_11065 PF01810 LysE type translocator FIV01_11075 PF03806 AbgT putative transporter family FIV01_11085 PF18389 TrmO C-terminal domain FIV01_11085 PF01980 tRNA-methyltransferase O FIV01_11090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV01_11090 PF03129 Anticodon binding domain FIV01_11090 PF04073 Aminoacyl-tRNA editing domain FIV01_11095 PF13230 Glutamine amidotransferases class-II FIV01_11100 PF13580 SIS domain FIV01_11105 PF09317 Domain of unknown function (DUF1974) FIV01_11105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV01_11105 PF02770 Acyl-CoA dehydrogenase, middle domain FIV01_11105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV01_11115 PF00929 Exonuclease FIV01_11120 PF00075 RNase H FIV01_11125 PF08241 Methyltransferase domain FIV01_11135 PF01476 LysM domain FIV01_11135 PF01464 Transglycosylase SLT domain FIV01_11140 PF03372 Endonuclease/Exonuclease/phosphatase family FIV01_11145 PF00543 Nitrogen regulatory protein P-II FIV01_11150 PF00034 Cytochrome c FIV01_11155 PF11734 TilS substrate C-terminal domain FIV01_11155 PF09179 TilS substrate binding domain FIV01_11155 PF01171 PP-loop family FIV01_11160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FIV01_11165 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV01_11165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV01_11165 PF14579 Helix-hairpin-helix motif FIV01_11165 PF01336 OB-fold nucleic acid binding domain FIV01_11165 PF02811 PHP domain FIV01_11170 PF01351 Ribonuclease HII FIV01_11175 PF02684 Lipid-A-disaccharide synthetase FIV01_11185 PF07977 FabA-like domain FIV01_11190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FIV01_11190 PF00132 Bacterial transferase hexapeptide (six repeats) FIV01_11195 PF03938 Outer membrane protein (OmpH-like) FIV01_11200 PF07244 Surface antigen variable number repeat FIV01_11200 PF01103 Surface antigen FIV01_11205 PF17820 PDZ domain FIV01_11205 PF02163 Peptidase family M50 FIV01_11210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FIV01_11210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FIV01_11210 PF13288 DXP reductoisomerase C-terminal domain FIV01_11220 PF01255 Putative undecaprenyl diphosphate synthase FIV01_11225 PF01765 Ribosome recycling factor FIV01_11230 PF00696 Amino acid kinase family FIV01_11235 PF00889 Elongation factor TS FIV01_11240 PF00318 Ribosomal protein S2 FIV01_11250 PF00557 Metallopeptidase family M24 FIV01_11255 PF01909 Nucleotidyltransferase domain FIV01_11255 PF01966 HD domain FIV01_11255 PF08335 GlnD PII-uridylyltransferase FIV01_11260 PF11944 Protein of unknown function (DUF3461) FIV01_11265 PF04608 Phosphatidylglycerophosphatase A FIV01_11270 PF02769 AIR synthase related protein, C-terminal domain FIV01_11270 PF00586 AIR synthase related protein, N-terminal domain FIV01_11275 PF01029 NusB family FIV01_11280 PF00885 6,7-dimethyl-8-ribityllumazine synthase FIV01_11285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIV01_11285 PF00925 GTP cyclohydrolase II FIV01_11290 PF00677 Lumazine binding domain FIV01_11295 PF01872 RibD C-terminal domain FIV01_11295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV01_11300 PF03477 ATP cone domain FIV01_11310 PF00696 Amino acid kinase family FIV01_11310 PF01472 PUA domain FIV01_11315 PF07417 Sigma factor-binding transcriptional regulator Crl FIV01_11325 PF00156 Phosphoribosyl transferase domain FIV01_11330 PF00860 Permease family FIV01_11335 PF01546 Peptidase family M20/M25/M40 FIV01_11335 PF07687 Peptidase dimerisation domain FIV01_11340 PF18030 RimK PreATP-grasp domain FIV01_11340 PF08443 RimK-like ATP-grasp domain FIV01_11345 PF18030 RimK PreATP-grasp domain FIV01_11345 PF08443 RimK-like ATP-grasp domain FIV01_11355 PF00209 Sodium:neurotransmitter symporter family FIV01_11365 PF03449 Transcription elongation factor, N-terminal FIV01_11365 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV01_11370 PF09382 RQC domain FIV01_11370 PF16124 RecQ zinc-binding FIV01_11370 PF00270 DEAD/DEAH box helicase FIV01_11370 PF00570 HRDC domain FIV01_11370 PF00271 Helicase conserved C-terminal domain FIV01_11375 PF11799 impB/mucB/samB family C-terminal domain FIV01_11375 PF00817 impB/mucB/samB family FIV01_11380 PF02463 RecF/RecN/SMC N terminal domain FIV01_11410 PF02424 ApbE family FIV01_11415 PF00175 Oxidoreductase NAD-binding domain FIV01_11415 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV01_11415 PF00970 Oxidoreductase FAD-binding domain FIV01_11420 PF02508 Rnf-Nqr subunit, membrane protein FIV01_11425 PF02508 Rnf-Nqr subunit, membrane protein FIV01_11430 PF04205 FMN-binding domain FIV01_11435 PF03116 NQR2, RnfD, RnfE family FIV01_11440 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FIV01_11440 PF11973 NQRA C-terminal domain FIV01_11450 PF01722 BolA-like protein FIV01_11455 PF05175 Methyltransferase small domain FIV01_11465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV01_11470 PF07690 Major Facilitator Superfamily FIV01_11480 PF04545 Sigma-70, region 4 FIV01_11480 PF04542 Sigma-70 region 2 FIV01_11490 PF03502 Nucleoside-specific channel-forming protein, Tsx FIV01_11495 PF08546 Ketopantoate reductase PanE/ApbA C terminal FIV01_11495 PF02558 Ketopantoate reductase PanE/ApbA FIV01_11500 PF01965 DJ-1/PfpI family FIV01_11505 PF00266 Aminotransferase class-V FIV01_11510 PF18073 Rubredoxin metal binding domain FIV01_11520 PF18429 Domain of unknown function (DUF5609) FIV01_11530 PF01048 Phosphorylase superfamily FIV01_11535 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FIV01_11535 PF02885 Glycosyl transferase family, helical bundle domain FIV01_11535 PF00591 Glycosyl transferase family, a/b domain FIV01_11540 PF01791 DeoC/LacD family aldolase FIV01_11545 PF01773 Na+ dependent nucleoside transporter N-terminus FIV01_11545 PF07670 Nucleoside recognition FIV01_11545 PF07662 Na+ dependent nucleoside transporter C-terminus FIV01_11550 PF01026 TatD related DNase FIV01_11560 PF03883 Peroxide stress protein YaaA FIV01_11565 PF01235 Sodium:alanine symporter family FIV01_11580 PF03167 Uracil DNA glycosylase superfamily FIV01_11585 PF01228 Glycine radical FIV01_11590 PF00990 Diguanylate cyclase, GGDEF domain FIV01_11590 PF00072 Response regulator receiver domain FIV01_11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_11635 PF03466 LysR substrate binding domain FIV01_11640 PF01925 Sulfite exporter TauE/SafE FIV01_11670 PF02322 Cytochrome bd terminal oxidase subunit II FIV01_11675 PF01654 Cytochrome bd terminal oxidase subunit I FIV01_11690 PF05114 Protein of unknown function (DUF692) FIV01_11710 PF01338 Bacillus thuringiensis toxin FIV01_11730 PF02142 MGS-like domain FIV01_11730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV01_11730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FIV01_11735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FIV01_11735 PF00117 Glutamine amidotransferase class-I FIV01_11740 PF05173 Dihydrodipicolinate reductase, C-terminus FIV01_11740 PF01113 Dihydrodipicolinate reductase, N-terminus FIV01_11745 PF00293 NUDIX domain FIV01_11750 PF07517 SecA DEAD-like domain FIV01_11750 PF01043 SecA preprotein cross-linking domain FIV01_11750 PF02810 SEC-C motif FIV01_11750 PF07516 SecA Wing and Scaffold domain FIV01_11760 PF00091 Tubulin/FtsZ family, GTPase domain FIV01_11760 PF12327 FtsZ family, C-terminal domain FIV01_11765 PF02491 SHS2 domain inserted in FTSA FIV01_11770 PF08478 POTRA domain, FtsQ-type FIV01_11770 PF03799 Cell division protein FtsQ FIV01_11775 PF02875 Mur ligase family, glutamate ligase domain FIV01_11775 PF08245 Mur ligase middle domain FIV01_11775 PF01225 Mur ligase family, catalytic domain FIV01_11785 PF01098 Cell cycle protein FIV01_11790 PF08245 Mur ligase middle domain FIV01_11790 PF02875 Mur ligase family, glutamate ligase domain FIV01_11795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FIV01_11795 PF00953 Glycosyl transferase family 4 FIV01_11800 PF08245 Mur ligase middle domain FIV01_11800 PF02875 Mur ligase family, glutamate ligase domain FIV01_11800 PF01225 Mur ligase family, catalytic domain FIV01_11805 PF01225 Mur ligase family, catalytic domain FIV01_11805 PF02875 Mur ligase family, glutamate ligase domain FIV01_11805 PF08245 Mur ligase middle domain FIV01_11810 PF03717 Penicillin-binding Protein dimerisation domain FIV01_11810 PF00905 Penicillin binding protein transpeptidase domain FIV01_11815 PF04999 Cell division protein FtsL FIV01_11820 PF01795 MraW methylase family FIV01_11830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV01_11835 PF04348 LppC putative lipoprotein FIV01_11840 PF02021 Uncharacterised protein family UPF0102 FIV01_11845 PF13580 SIS domain FIV01_11850 PF04972 BON domain FIV01_11855 PF04386 Stringent starvation protein B FIV01_11860 PF02798 Glutathione S-transferase, N-terminal domain FIV01_11860 PF00043 Glutathione S-transferase, C-terminal domain FIV01_11865 PF02167 Cytochrome C1 family FIV01_11870 PF00032 Cytochrome b(C-terminal)/b6/petD FIV01_11870 PF00033 Cytochrome b/b6/petB FIV01_11875 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FIV01_11875 PF00355 Rieske [2Fe-2S] domain FIV01_11880 PF00380 Ribosomal protein S9/S16 FIV01_11885 PF00572 Ribosomal protein L13 FIV01_11890 PF03969 AFG1-like ATPase FIV01_11895 PF06295 Protein of unknown function (DUF1043) FIV01_11900 PF00595 PDZ domain FIV01_11905 PF13180 PDZ domain FIV01_11910 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV01_11910 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV01_11915 PF00204 DNA gyrase B FIV01_11915 PF00986 DNA gyrase B subunit, carboxyl terminus FIV01_11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_11915 PF01751 Toprim domain FIV01_11920 PF05728 Uncharacterised protein family (UPF0227) FIV01_11925 PF00149 Calcineurin-like phosphoesterase FIV01_11930 PF06853 Protein of unknown function (DUF1249) FIV01_11935 PF00293 NUDIX domain FIV01_11940 PF02321 Outer membrane efflux protein FIV01_11945 PF00989 PAS fold FIV01_11945 PF18415 Histidine kinase receptor ArcB trans-membrane domain FIV01_11945 PF01627 Hpt domain FIV01_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_11945 PF00072 Response regulator receiver domain FIV01_11945 PF00512 His Kinase A (phospho-acceptor) domain FIV01_11950 PF01590 GAF domain FIV01_11950 PF00563 EAL domain FIV01_11950 PF00990 Diguanylate cyclase, GGDEF domain FIV01_11950 PF00360 Phytochrome region FIV01_11960 PF01645 Conserved region in glutamate synthase FIV01_11960 PF04898 Glutamate synthase central domain FIV01_11960 PF01493 GXGXG motif FIV01_11960 PF00310 Glutamine amidotransferases class-II FIV01_11965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_11965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIV01_11975 PF09157 Pseudouridine synthase II TruB, C-terminal FIV01_11975 PF16198 tRNA pseudouridylate synthase B C-terminal domain FIV01_11975 PF01509 TruB family pseudouridylate synthase (N terminal domain) FIV01_11980 PF02033 Ribosome-binding factor A FIV01_11985 PF11987 Translation-initiation factor 2 FIV01_11985 PF00009 Elongation factor Tu GTP binding domain FIV01_11985 PF04760 Translation initiation factor IF-2, N-terminal region FIV01_11985 PF08364 Bacterial translation initiation factor IF-2 associated region FIV01_11990 PF00575 S1 RNA binding domain FIV01_11990 PF13184 NusA-like KH domain FIV01_11990 PF08529 NusA N-terminal domain FIV01_11995 PF17384 RimP C-terminal SH3 domain FIV01_11995 PF02576 RimP N-terminal domain FIV01_12010 PF03840 Preprotein translocase SecG subunit FIV01_12015 PF13508 Acetyltransferase (GNAT) domain FIV01_12020 PF00990 Diguanylate cyclase, GGDEF domain FIV01_12020 PF03707 Bacterial signalling protein N terminal repeat FIV01_12020 PF00563 EAL domain FIV01_12025 PF01336 OB-fold nucleic acid binding domain FIV01_12025 PF00152 tRNA synthetases class II (D, K and N) FIV01_12030 PF00472 RF-1 domain FIV01_12030 PF03462 PCRF domain FIV01_12035 PF05525 Branched-chain amino acid transport protein FIV01_12040 PF05175 Methyltransferase small domain FIV01_12045 PF00271 Helicase conserved C-terminal domain FIV01_12045 PF00270 DEAD/DEAH box helicase FIV01_12050 PF00009 Elongation factor Tu GTP binding domain FIV01_12050 PF03144 Elongation factor Tu domain 2 FIV01_12050 PF16658 Class II release factor RF3, C-terminal domain FIV01_12055 PF03707 Bacterial signalling protein N terminal repeat FIV01_12055 PF00990 Diguanylate cyclase, GGDEF domain FIV01_12055 PF00563 EAL domain FIV01_12060 PF00583 Acetyltransferase (GNAT) family FIV01_12070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV01_12070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV01_12070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV01_12070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV01_12075 PF00809 Pterin binding enzyme FIV01_12080 PF17862 AAA+ lid domain FIV01_12080 PF01434 Peptidase family M41 FIV01_12080 PF06480 FtsH Extracellular FIV01_12080 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_12085 PF01728 FtsJ-like methyltransferase FIV01_12090 PF01985 CRS1 / YhbY (CRM) domain FIV01_12095 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV01_12095 PF03449 Transcription elongation factor, N-terminal FIV01_12105 PF13609 Gram-negative porin FIV01_12110 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FIV01_12120 PF00579 tRNA synthetases class I (W and Y) FIV01_12125 PF08525 Opacity-associated protein A N-terminal motif FIV01_12125 PF01551 Peptidase family M23 FIV01_12125 PF01476 LysM domain FIV01_12130 PF00873 AcrB/AcrD/AcrF family FIV01_12145 PF00202 Aminotransferase class-III FIV01_12150 PF01594 AI-2E family transporter FIV01_12155 PF08468 Methyltransferase small domain N-terminal FIV01_12155 PF05175 Methyltransferase small domain FIV01_12160 PF00072 Response regulator receiver domain FIV01_12160 PF09308 LuxQ, periplasmic FIV01_12160 PF00512 His Kinase A (phospho-acceptor) domain FIV01_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_12165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_12170 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_12175 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_12175 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_12180 PF00005 ABC transporter FIV01_12180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_12185 PF00005 ABC transporter FIV01_12185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_12195 PF01869 BadF/BadG/BcrA/BcrD ATPase family FIV01_12200 PF00728 Glycosyl hydrolase family 20, catalytic domain FIV01_12200 PF02838 Glycosyl hydrolase family 20, domain 2 FIV01_12205 PF08402 TOBE domain FIV01_12205 PF00005 ABC transporter FIV01_12215 PF13416 Bacterial extracellular solute-binding protein FIV01_12220 PF00909 Ammonium Transporter Family FIV01_12225 PF00543 Nitrogen regulatory protein P-II FIV01_12230 PF06062 Uncharacterised protein family (UPF0231) FIV01_12235 PF00330 Aconitase family (aconitate hydratase) FIV01_12235 PF11791 Aconitate B N-terminal domain FIV01_12235 PF06434 Aconitate hydratase 2 N-terminus FIV01_12240 PF01734 Patatin-like phospholipase FIV01_12245 PF00912 Transglycosylase FIV01_12245 PF00905 Penicillin binding protein transpeptidase domain FIV01_12245 PF14814 Bifunctional transglycosylase second domain FIV01_12250 PF00270 DEAD/DEAH box helicase FIV01_12250 PF08482 ATP-dependent helicase C-terminal FIV01_12250 PF00271 Helicase conserved C-terminal domain FIV01_12250 PF04408 Helicase associated domain (HA2) FIV01_12255 PF17746 SfsA N-terminal OB domain FIV01_12255 PF03749 Sugar fermentation stimulation protein RE domain FIV01_12260 PF01258 Prokaryotic dksA/traR C4-type zinc finger FIV01_12265 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV01_12270 PF01743 Poly A polymerase head domain FIV01_12270 PF12626 Polymerase A arginine-rich C-terminus FIV01_12270 PF12627 Probable RNA and SrmB- binding site of polymerase A FIV01_12275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIV01_12280 PF02548 Ketopantoate hydroxymethyltransferase FIV01_12285 PF02569 Pantoate-beta-alanine ligase FIV01_12290 PF01061 ABC-2 type transporter FIV01_12295 PF00005 ABC transporter FIV01_12300 PF00484 Carbonic anhydrase FIV01_12305 PF00156 Phosphoribosyl transferase domain FIV01_12310 PF00440 Bacterial regulatory proteins, tetR family FIV01_12315 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_12315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV01_12320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV01_12320 PF02817 e3 binding domain FIV01_12320 PF00364 Biotin-requiring enzyme FIV01_12325 PF00456 Transketolase, thiamine diphosphate binding domain FIV01_12325 PF17831 Pyruvate dehydrogenase E1 component middle domain FIV01_12330 PF07729 FCD domain FIV01_12330 PF00392 Bacterial regulatory proteins, gntR family FIV01_12335 PF02272 DHHA1 domain FIV01_12335 PF17768 RecJ OB domain FIV01_12335 PF01368 DHH family FIV01_12340 PF10411 Disulfide bond isomerase protein N-terminus FIV01_12340 PF13098 Thioredoxin-like domain FIV01_12345 PF02899 Phage integrase, N-terminal SAM-like domain FIV01_12345 PF00589 Phage integrase family FIV01_12350 PF00258 Flavodoxin FIV01_12355 PF01510 N-acetylmuramoyl-L-alanine amidase FIV01_12360 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FIV01_12360 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FIV01_12365 PF07963 Prokaryotic N-terminal methylation motif FIV01_12370 PF00437 Type II/IV secretion system protein FIV01_12370 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIV01_12375 PF00482 Type II secretion system (T2SS), protein F FIV01_12380 PF06750 Bacterial Peptidase A24 N-terminal domain FIV01_12380 PF01478 Type IV leader peptidase family FIV01_12385 PF01121 Dephospho-CoA kinase FIV01_12390 PF07072 Cell division protein FIV01_12395 PF03884 DNA gyrase inhibitor YacG FIV01_12400 PF01245 Ribosomal protein L19 FIV01_12405 PF01746 tRNA (Guanine-1)-methyltransferase FIV01_12410 PF01782 RimM N-terminal domain FIV01_12410 PF05239 PRC-barrel domain FIV01_12415 PF00886 Ribosomal protein S16 FIV01_12420 PF02978 Signal peptide binding domain FIV01_12420 PF00448 SRP54-type protein, GTPase domain FIV01_12420 PF02881 SRP54-type protein, helical bundle domain FIV01_12425 PF01578 Cytochrome C assembly protein FIV01_12430 PF00571 CBS domain FIV01_12430 PF03471 Transporter associated domain FIV01_12430 PF01595 Cyclin M transmembrane N-terminal domain FIV01_12435 PF04545 Sigma-70, region 4 FIV01_12435 PF04539 Sigma-70 region 3 FIV01_12435 PF04542 Sigma-70 region 2 FIV01_12435 PF00140 Sigma-70 factor, region 1.2 FIV01_12440 PF01476 LysM domain FIV01_12440 PF01551 Peptidase family M23 FIV01_12450 PF01975 Survival protein SurE FIV01_12455 PF01142 tRNA pseudouridine synthase D (TruD) FIV01_12460 PF02542 YgbB family FIV01_12465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FIV01_12470 PF04977 Septum formation initiator FIV01_12475 PF02673 Bacitracin resistance protein BacA FIV01_12480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIV01_12485 PF02152 Dihydroneopterin aldolase FIV01_12490 PF02660 Glycerol-3-phosphate acyltransferase FIV01_12500 PF00814 Glycoprotease family FIV01_12505 PF01165 Ribosomal protein S21 FIV01_12510 PF09424 Yqey-like protein FIV01_12515 PF10410 DnaB-helicase binding domain of primase FIV01_12515 PF08278 DNA primase DnaG DnaB-binding FIV01_12515 PF08275 DNA primase catalytic core, N-terminal domain FIV01_12515 PF01807 CHC2 zinc finger FIV01_12520 PF04542 Sigma-70 region 2 FIV01_12520 PF04545 Sigma-70, region 4 FIV01_12520 PF00140 Sigma-70 factor, region 1.2 FIV01_12520 PF03979 Sigma-70 factor, region 1.1 FIV01_12520 PF04546 Sigma-70, non-essential region FIV01_12520 PF04539 Sigma-70 region 3 FIV01_12530 PF00226 DnaJ domain FIV01_12530 PF05099 Tellurite resistance protein TerB FIV01_12535 PF03968 OstA-like protein FIV01_12535 PF04453 LPS transport system D FIV01_12540 PF09312 SurA N-terminal domain FIV01_12545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FIV01_12550 PF00398 Ribosomal RNA adenine dimethylase FIV01_12555 PF04379 ApaG domain FIV01_12560 PF00149 Calcineurin-like phosphoesterase FIV01_12605 PF02664 S-Ribosylhomocysteinase (LuxS) FIV01_12610 PF04262 Glutamate-cysteine ligase FIV01_12615 PF05193 Peptidase M16 inactive domain FIV01_12615 PF00675 Insulinase (Peptidase family M16) FIV01_12620 PF09335 SNARE associated Golgi protein FIV01_12670 PF02599 Global regulator protein family FIV01_12675 PF01842 ACT domain FIV01_12675 PF13840 ACT domain FIV01_12675 PF00696 Amino acid kinase family FIV01_12680 PF02272 DHHA1 domain FIV01_12680 PF01411 tRNA synthetases class II (A) FIV01_12680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV01_12685 PF02631 RecX family FIV01_12690 PF00154 recA bacterial DNA recombination protein FIV01_12695 PF02464 Competence-damaged protein FIV01_12700 PF05190 MutS family domain IV FIV01_12700 PF01624 MutS domain I FIV01_12700 PF05192 MutS domain III FIV01_12700 PF00488 MutS domain V FIV01_12700 PF05188 MutS domain II FIV01_12705 PF03739 Lipopolysaccharide export system permease LptF/LptG FIV01_12710 PF03739 Lipopolysaccharide export system permease LptF/LptG FIV01_12715 PF02789 Cytosol aminopeptidase family, N-terminal domain FIV01_12715 PF00883 Cytosol aminopeptidase family, catalytic domain FIV01_12720 PF04364 DNA polymerase III chi subunit, HolC FIV01_12725 PF10458 Valyl tRNA synthetase tRNA binding arm FIV01_12725 PF00133 tRNA synthetases class I (I, L, M and V) FIV01_12725 PF08264 Anticodon-binding domain of tRNA FIV01_12735 PF05987 Bacterial protein of unknown function (DUF898) FIV01_12745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV01_12745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV01_12750 PF00849 RNA pseudouridylate synthase FIV01_12765 PF00271 Helicase conserved C-terminal domain FIV01_12765 PF00176 SNF2 family N-terminal domain FIV01_12765 PF12137 RNA polymerase recycling family C-terminal FIV01_12765 PF18339 RapA N-terminal Tudor like domain 1 FIV01_12765 PF18337 RapA N-terminal Tudor like domain FIV01_12770 PF13638 PIN domain FIV01_12770 PF02562 PhoH-like protein FIV01_12775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV01_12775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV01_12780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV01_12780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV01_12785 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FIV01_12785 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FIV01_12790 PF01042 Endoribonuclease L-PSP FIV01_12800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FIV01_12800 PF00056 lactate/malate dehydrogenase, NAD binding domain FIV01_12805 PF01316 Arginine repressor, DNA binding domain FIV01_12805 PF02863 Arginine repressor, C-terminal domain FIV01_12810 PF16868 NMT1-like family FIV01_12820 PF00582 Universal stress protein family FIV01_12850 PF03193 RsgA GTPase FIV01_12860 PF00550 Phosphopantetheine attachment site FIV01_12860 PF13193 AMP-binding enzyme C-terminal domain FIV01_12860 PF00501 AMP-binding enzyme FIV01_12860 PF00975 Thioesterase domain FIV01_12860 PF00668 Condensation domain FIV01_12865 PF00668 Condensation domain FIV01_12865 PF13193 AMP-binding enzyme C-terminal domain FIV01_12865 PF07993 Male sterility protein FIV01_12865 PF00501 AMP-binding enzyme FIV01_12865 PF00550 Phosphopantetheine attachment site FIV01_12870 PF00975 Thioesterase domain FIV01_12870 PF00501 AMP-binding enzyme FIV01_12870 PF13193 AMP-binding enzyme C-terminal domain FIV01_12870 PF00668 Condensation domain FIV01_12870 PF00550 Phosphopantetheine attachment site FIV01_12875 PF00550 Phosphopantetheine attachment site FIV01_12875 PF00975 Thioesterase domain FIV01_12875 PF00668 Condensation domain FIV01_12875 PF00501 AMP-binding enzyme FIV01_12875 PF13193 AMP-binding enzyme C-terminal domain FIV01_12890 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FIV01_12895 PF12706 Beta-lactamase superfamily domain FIV01_12895 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain FIV01_12900 PF06877 Regulator of ribonuclease activity B FIV01_12910 PF01553 Acyltransferase FIV01_12915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV01_12920 PF01722 BolA-like protein FIV01_12930 PF05494 MlaC protein FIV01_12935 PF02470 MlaD protein FIV01_12940 PF02405 Permease MlaE FIV01_12945 PF00005 ABC transporter FIV01_12950 PF01699 Sodium/calcium exchanger protein FIV01_12955 PF01380 SIS domain FIV01_12955 PF00571 CBS domain FIV01_12970 PF03968 OstA-like protein FIV01_12975 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV01_12975 PF00005 ABC transporter FIV01_12980 PF04963 Sigma-54 factor, core binding domain FIV01_12980 PF00309 Sigma-54 factor, Activator interacting domain (AID) FIV01_12980 PF04552 Sigma-54, DNA binding domain FIV01_12985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIV01_12990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV01_12995 PF03668 P-loop ATPase protein family FIV01_13000 PF00381 PTS HPr component phosphorylation site FIV01_13005 PF01769 Divalent cation transporter FIV01_13005 PF00571 CBS domain FIV01_13005 PF03448 MgtE intracellular N domain FIV01_13010 PF00809 Pterin binding enzyme FIV01_13010 PF02965 Vitamin B12 dependent methionine synthase, activation domain FIV01_13010 PF02310 B12 binding domain FIV01_13010 PF02574 Homocysteine S-methyltransferase FIV01_13010 PF02607 B12 binding domain FIV01_13015 PF00999 Sodium/hydrogen exchanger family FIV01_13105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV01_13105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV01_13110 PF00175 Oxidoreductase NAD-binding domain FIV01_13110 PF00258 Flavodoxin FIV01_13110 PF00667 FAD binding domain FIV01_13130 PF01207 Dihydrouridine synthase (Dus) FIV01_13170 PF03600 Citrate transporter FIV01_13170 PF02080 TrkA-C domain FIV01_13175 PF00009 Elongation factor Tu GTP binding domain FIV01_13180 PF01507 Phosphoadenosine phosphosulfate reductase family FIV01_13185 PF14824 Sirohaem biosynthesis protein central FIV01_13185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV01_13185 PF10414 Sirohaem synthase dimerisation region FIV01_13190 PF00149 Calcineurin-like phosphoesterase FIV01_13190 PF02872 5'-nucleotidase, C-terminal domain FIV01_13200 PF13673 Acetyltransferase (GNAT) domain FIV01_13205 PF00892 EamA-like transporter family FIV01_13210 PF04225 Opacity-associated protein A LysM-like domain FIV01_13210 PF08525 Opacity-associated protein A N-terminal motif FIV01_13220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_13220 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV01_13225 PF01196 Ribosomal protein L17 FIV01_13235 PF00163 Ribosomal protein S4/S9 N-terminal domain FIV01_13235 PF01479 S4 domain FIV01_13240 PF00411 Ribosomal protein S11 FIV01_13245 PF00416 Ribosomal protein S13/S18 FIV01_13250 PF00444 Ribosomal protein L36 FIV01_13255 PF00344 SecY translocase FIV01_13265 PF00327 Ribosomal protein L30p/L7e FIV01_13270 PF00333 Ribosomal protein S5, N-terminal domain FIV01_13270 PF03719 Ribosomal protein S5, C-terminal domain FIV01_13275 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FIV01_13280 PF00347 Ribosomal protein L6 FIV01_13285 PF00410 Ribosomal protein S8 FIV01_13290 PF00253 Ribosomal protein S14p/S29e FIV01_13295 PF00281 Ribosomal protein L5 FIV01_13295 PF00673 ribosomal L5P family C-terminus FIV01_13300 PF00467 KOW motif FIV01_13300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FIV01_13305 PF00238 Ribosomal protein L14p/L23e FIV01_13310 PF00366 Ribosomal protein S17 FIV01_13315 PF00831 Ribosomal L29 protein FIV01_13320 PF00252 Ribosomal protein L16p/L10e FIV01_13325 PF07650 KH domain FIV01_13325 PF00189 Ribosomal protein S3, C-terminal domain FIV01_13330 PF00237 Ribosomal protein L22p/L17e FIV01_13335 PF00203 Ribosomal protein S19 FIV01_13340 PF00181 Ribosomal Proteins L2, RNA binding domain FIV01_13340 PF03947 Ribosomal Proteins L2, C-terminal domain FIV01_13345 PF00276 Ribosomal protein L23 FIV01_13350 PF00573 Ribosomal protein L4/L1 family FIV01_13360 PF00338 Ribosomal protein S10p/S20e FIV01_13365 PF00588 SpoU rRNA Methylase family FIV01_13365 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV01_13370 PF00575 S1 RNA binding domain FIV01_13370 PF08206 Ribonuclease B OB domain FIV01_13370 PF00773 RNB domain FIV01_13370 PF08461 Ribonuclease R winged-helix domain FIV01_13370 PF17876 Cold shock domain FIV01_13380 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA FIV01_13385 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system FIV01_13390 PF08238 Sel1 repeat FIV01_13395 PF00709 Adenylosuccinate synthetase FIV01_13400 PF01112 Asparaginase FIV01_13405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_13415 PF02254 TrkA-N domain FIV01_13415 PF00999 Sodium/hydrogen exchanger family FIV01_13420 PF02525 Flavodoxin-like fold FIV01_13425 PF12848 ABC transporter FIV01_13425 PF00005 ABC transporter FIV01_13435 PF00561 alpha/beta hydrolase fold FIV01_13440 PF06794 Uncharacterised protein family (UPF0270) FIV01_13445 PF00485 Phosphoribulokinase / Uridine kinase family FIV01_13450 PF13545 Crp-like helix-turn-helix domain FIV01_13450 PF00027 Cyclic nucleotide-binding domain FIV01_13465 PF00171 Aldehyde dehydrogenase family FIV01_13470 PF04958 Arginine N-succinyltransferase beta subunit FIV01_13475 PF00202 Aminotransferase class-III FIV01_13480 PF00117 Glutamine amidotransferase class-I FIV01_13495 PF04186 FxsA cytoplasmic membrane protein FIV01_13500 PF10415 Fumarase C C-terminus FIV01_13500 PF00206 Lyase FIV01_13505 PF03605 Anaerobic c4-dicarboxylate membrane transporter FIV01_13510 PF03606 C4-dicarboxylate anaerobic carrier FIV01_13520 PF00696 Amino acid kinase family FIV01_13525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV01_13525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV01_13530 PF01316 Arginine repressor, DNA binding domain FIV01_13530 PF02863 Arginine repressor, C-terminal domain FIV01_13535 PF11412 Disulphide bond corrector protein DsbC FIV01_13535 PF02683 Cytochrome C biogenesis protein transmembrane region FIV01_13540 PF00196 Bacterial regulatory proteins, luxR family FIV01_13540 PF00072 Response regulator receiver domain FIV01_13545 PF01914 MarC family integral membrane protein FIV01_13555 PF00474 Sodium:solute symporter family FIV01_13565 PF00512 His Kinase A (phospho-acceptor) domain FIV01_13565 PF01627 Hpt domain FIV01_13565 PF00072 Response regulator receiver domain FIV01_13565 PF00672 HAMP domain FIV01_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_13570 PF12832 MFS_1 like family FIV01_13585 PF13193 AMP-binding enzyme C-terminal domain FIV01_13585 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV01_13585 PF00501 AMP-binding enzyme FIV01_13590 PF01220 Dehydroquinase class II FIV01_13595 PF00364 Biotin-requiring enzyme FIV01_13600 PF02785 Biotin carboxylase C-terminal domain FIV01_13600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV01_13600 PF00289 Biotin carboxylase, N-terminal domain FIV01_13605 PF06196 Protein of unknown function (DUF997) FIV01_13610 PF00474 Sodium:solute symporter family FIV01_13620 PF01207 Dihydrouridine synthase (Dus) FIV01_13625 PF02954 Bacterial regulatory protein, Fis family FIV01_13635 PF13411 MerR HTH family regulatory protein FIV01_13640 PF02142 MGS-like domain FIV01_13640 PF01808 AICARFT/IMPCHase bienzyme FIV01_13645 PF02843 Phosphoribosylglycinamide synthetase, C domain FIV01_13645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FIV01_13645 PF02844 Phosphoribosylglycinamide synthetase, N domain FIV01_13655 PF00216 Bacterial DNA-binding protein FIV01_13660 PF01595 Cyclin M transmembrane N-terminal domain FIV01_13660 PF00571 CBS domain FIV01_13665 PF04222 Protein of unknown function (DUF416) FIV01_13670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV01_13685 PF13358 DDE superfamily endonuclease FIV01_13730 PF01177 Asp/Glu/Hydantoin racemase FIV01_13735 PF00593 TonB dependent receptor FIV01_13735 PF07715 TonB-dependent Receptor Plug Domain FIV01_13740 PF05958 tRNA (Uracil-5-)-methyltransferase FIV01_13750 PF00440 Bacterial regulatory proteins, tetR family FIV01_13760 PF01554 MatE FIV01_13770 PF01726 LexA DNA binding domain FIV01_13770 PF00717 Peptidase S24-like FIV01_13775 PF01219 Prokaryotic diacylglycerol kinase FIV01_13780 PF01553 Acyltransferase FIV01_13785 PF01040 UbiA prenyltransferase family FIV01_13790 PF04345 Chorismate lyase FIV01_13795 PF03748 Flagellar basal body-associated protein FliL FIV01_13800 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FIV01_13800 PF01694 Rhomboid family FIV01_13805 PF00581 Rhodanese-like domain FIV01_13815 PF04542 Sigma-70 region 2 FIV01_13815 PF04545 Sigma-70, region 4 FIV01_13815 PF00140 Sigma-70 factor, region 1.2 FIV01_13820 PF18075 FtsX extracellular domain FIV01_13825 PF00005 ABC transporter FIV01_13830 PF02881 SRP54-type protein, helical bundle domain FIV01_13830 PF00448 SRP54-type protein, GTPase domain FIV01_13845 PF01914 MarC family integral membrane protein FIV01_13870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV01_13870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV01_13875 PF01022 Bacterial regulatory protein, arsR family FIV01_13880 PF00563 EAL domain FIV01_13880 PF08668 HDOD domain FIV01_13885 PF01810 LysE type translocator FIV01_13890 PF12146 Serine aminopeptidase, S33 FIV01_13915 PF13419 Haloacid dehalogenase-like hydrolase FIV01_13920 PF02899 Phage integrase, N-terminal SAM-like domain FIV01_13920 PF00589 Phage integrase family FIV01_13930 PF01678 Diaminopimelate epimerase FIV01_13935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV01_13935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV01_13940 PF01491 Frataxin-like domain FIV01_13945 PF12633 Adenylate cyclase NT domain FIV01_13945 PF01295 Adenylate cyclase, class-I FIV01_13950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FIV01_13950 PF03900 Porphobilinogen deaminase, C-terminal domain FIV01_13955 PF02602 Uroporphyrinogen-III synthase HemD FIV01_13960 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FIV01_13965 PF07219 HemY protein N-terminus FIV01_13965 PF07719 Tetratricopeptide repeat FIV01_13975 PF13358 DDE superfamily endonuclease FIV01_14010 PF00175 Oxidoreductase NAD-binding domain FIV01_14015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FIV01_14025 PF07498 Rho termination factor, N-terminal domain FIV01_14025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_14025 PF07497 Rho termination factor, RNA-binding domain FIV01_14030 PF00085 Thioredoxin FIV01_14035 PF00270 DEAD/DEAH box helicase FIV01_14035 PF00271 Helicase conserved C-terminal domain FIV01_14040 PF02541 Ppx/GppA phosphatase family FIV01_14045 PF02592 Putative vitamin uptake transporter FIV01_14055 PF00270 DEAD/DEAH box helicase FIV01_14055 PF00271 Helicase conserved C-terminal domain FIV01_14055 PF00570 HRDC domain FIV01_14055 PF16124 RecQ zinc-binding FIV01_14055 PF09382 RQC domain FIV01_14060 PF00892 EamA-like transporter family FIV01_14080 PF01810 LysE type translocator FIV01_14095 PF13361 UvrD-like helicase C-terminal domain FIV01_14095 PF00580 UvrD/REP helicase N-terminal domain FIV01_14105 PF05114 Protein of unknown function (DUF692) FIV01_14120 PF01432 Peptidase family M3 FIV01_14125 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FIV01_14130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_14130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV01_14140 PF08719 Domain of unknown function (DUF1768) FIV01_14140 PF00925 GTP cyclohydrolase II FIV01_14150 PF00672 HAMP domain FIV01_14150 PF17149 Periplasmic sensor domain found in signal transduction proteins FIV01_14150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_14150 PF00512 His Kinase A (phospho-acceptor) domain FIV01_14150 PF01627 Hpt domain FIV01_14150 PF00072 Response regulator receiver domain FIV01_14160 PF00486 Transcriptional regulatory protein, C terminal FIV01_14160 PF00072 Response regulator receiver domain FIV01_14175 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_14175 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_14185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_14190 PF00005 ABC transporter FIV01_14190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_14220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV01_14225 PF00580 UvrD/REP helicase N-terminal domain FIV01_14225 PF13361 UvrD-like helicase C-terminal domain FIV01_14230 PF00440 Bacterial regulatory proteins, tetR family FIV01_14235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_14240 PF00873 AcrB/AcrD/AcrF family FIV01_14245 PF04380 Membrane fusogenic activity FIV01_14250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FIV01_14250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FIV01_14255 PF03466 LysR substrate binding domain FIV01_14255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_14260 PF06969 HemN C-terminal domain FIV01_14260 PF04055 Radical SAM superfamily FIV01_14270 PF04220 Der GTPase activator (YihI) FIV01_14280 PF00034 Cytochrome c FIV01_14285 PF01926 50S ribosome-binding GTPase FIV01_14295 PF01612 3'-5' exonuclease FIV01_14295 PF00476 DNA polymerase family A FIV01_14295 PF01367 5'-3' exonuclease, C-terminal SAM fold FIV01_14295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIV01_14310 PF00490 Delta-aminolevulinic acid dehydratase FIV01_14315 PF01026 TatD related DNase FIV01_14320 PF00902 Sec-independent protein translocase protein (TatC) FIV01_14325 PF02416 mttA/Hcf106 family FIV01_14330 PF02416 mttA/Hcf106 family FIV01_14335 PF03109 ABC1 family FIV01_14345 PF01209 ubiE/COQ5 methyltransferase family FIV01_14350 PF02646 RmuC family FIV01_14360 PF12072 Domain of unknown function (DUF3552) FIV01_14360 PF00013 KH domain FIV01_14360 PF01966 HD domain FIV01_14375 PF03440 Aerolysin/Pertussis toxin (APT) domain FIV01_14375 PF01117 Aerolysin toxin FIV01_14380 PF00072 Response regulator receiver domain FIV01_14380 PF13426 PAS domain FIV01_14380 PF00512 His Kinase A (phospho-acceptor) domain FIV01_14380 PF08448 PAS fold FIV01_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_14385 PF00486 Transcriptional regulatory protein, C terminal FIV01_14385 PF00072 Response regulator receiver domain FIV01_14400 PF00011 Hsp20/alpha crystallin family FIV01_14415 PF00199 Catalase FIV01_14415 PF06628 Catalase-related immune-responsive FIV01_14420 PF05638 Type VI secretion system effector, Hcp FIV01_14460 PF10625 Universal stress protein B (UspB) FIV01_14465 PF00210 Ferritin-like domain FIV01_14470 PF00582 Universal stress protein family FIV01_14475 PF00892 EamA-like transporter family FIV01_14490 PF00990 Diguanylate cyclase, GGDEF domain FIV01_14490 PF08448 PAS fold FIV01_14490 PF00563 EAL domain FIV01_14495 PF01037 Lrp/AsnC ligand binding domain FIV01_14505 PF07690 Major Facilitator Superfamily FIV01_14510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_14510 PF03466 LysR substrate binding domain FIV01_14515 PF01321 Creatinase/Prolidase N-terminal domain FIV01_14515 PF00557 Metallopeptidase family M24 FIV01_14520 PF04055 Radical SAM superfamily FIV01_14520 PF06968 Biotin and Thiamin Synthesis associated domain FIV01_14525 PF05690 Thiazole biosynthesis protein ThiG FIV01_14535 PF00899 ThiF family FIV01_14540 PF02581 Thiamine monophosphate synthase FIV01_14545 PF13667 ThiC-associated domain FIV01_14545 PF01964 Radical SAM ThiC family FIV01_14550 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FIV01_14555 PF07731 Multicopper oxidase FIV01_14555 PF00394 Multicopper oxidase FIV01_14555 PF07732 Multicopper oxidase FIV01_14595 PF12724 Flavodoxin domain FIV01_14600 PF02386 Cation transport protein FIV01_14605 PF09186 Domain of unknown function (DUF1949) FIV01_14605 PF01205 Uncharacterized protein family UPF0029 FIV01_14615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV01_14615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV01_14615 PF00378 Enoyl-CoA hydratase/isomerase FIV01_14620 PF00108 Thiolase, N-terminal domain FIV01_14620 PF02803 Thiolase, C-terminal domain FIV01_14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_14625 PF03466 LysR substrate binding domain FIV01_14630 PF07690 Major Facilitator Superfamily FIV01_14635 PF00132 Bacterial transferase hexapeptide (six repeats) FIV01_14635 PF12804 MobA-like NTP transferase domain FIV01_14640 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FIV01_14640 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FIV01_14645 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV01_14645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_14650 PF00231 ATP synthase FIV01_14655 PF00306 ATP synthase alpha/beta chain, C terminal domain FIV01_14655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_14655 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV01_14660 PF00213 ATP synthase delta (OSCP) subunit FIV01_14665 PF00430 ATP synthase B/B' CF(0) FIV01_14670 PF00137 ATP synthase subunit C FIV01_14675 PF00119 ATP synthase A chain FIV01_14680 PF03899 ATP synthase I chain FIV01_14685 PF02195 ParB-like nuclease domain FIV01_14685 PF17762 HTH domain found in ParB protein FIV01_14690 PF13614 AAA domain FIV01_14695 PF02527 rRNA small subunit methyltransferase G FIV01_14700 PF01134 Glucose inhibited division protein A FIV01_14700 PF13932 GidA associated domain FIV01_14705 PF00258 Flavodoxin FIV01_14710 PF12631 MnmE helical domain FIV01_14710 PF10396 GTP-binding protein TrmE N-terminus FIV01_14710 PF01926 50S ribosome-binding GTPase FIV01_14715 PF02096 60Kd inner membrane protein FIV01_14715 PF14849 YidC periplasmic domain FIV01_14720 PF01809 Putative membrane protein insertion efficiency factor FIV01_14725 PF00825 Ribonuclease P FIV01_14730 PF00468 Ribosomal protein L34 FIV01_14735 PF00005 ABC transporter FIV01_14740 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_14745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_14755 PF01212 Beta-eliminating lyase FIV01_14760 PF00293 NUDIX domain FIV01_14770 PF07728 AAA domain (dynein-related subfamily) FIV01_14770 PF12592 Protein of unknown function (DUF3763) FIV01_14770 PF17868 AAA lid domain FIV01_14775 PF05762 VWA domain containing CoxE-like protein FIV01_14780 PF07690 Major Facilitator Superfamily FIV01_14785 PF00990 Diguanylate cyclase, GGDEF domain FIV01_14785 PF08448 PAS fold FIV01_14790 PF01047 MarR family FIV01_14795 PF02028 BCCT, betaine/carnitine/choline family transporter FIV01_14805 PF00929 Exonuclease FIV01_14805 PF02811 PHP domain FIV01_14805 PF14579 Helix-hairpin-helix motif FIV01_14805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV01_14805 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV01_14810 PF00571 CBS domain FIV01_14815 PF13411 MerR HTH family regulatory protein FIV01_14820 PF00871 Acetokinase family FIV01_14905 PF09334 tRNA synthetases class I (M) FIV01_14905 PF01588 Putative tRNA binding domain FIV01_14915 PF03222 Tryptophan/tyrosine permease family FIV01_14930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV01_14930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FIV01_14935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FIV01_14940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FIV01_14940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FIV01_14945 PF01966 HD domain FIV01_14970 PF01979 Amidohydrolase family FIV01_14975 PF03476 MOSC N-terminal beta barrel domain FIV01_14975 PF03473 MOSC domain FIV01_14975 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV01_14975 PF03476 MOSC N-terminal beta barrel domain FIV01_14975 PF03473 MOSC domain FIV01_14975 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV01_14980 PF08220 DeoR-like helix-turn-helix domain FIV01_14980 PF00455 DeoR C terminal sensor domain FIV01_14985 PF00563 EAL domain FIV01_14985 PF08668 HDOD domain FIV01_14990 PF00672 HAMP domain FIV01_14990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_14990 PF02743 Cache domain FIV01_15010 PF05661 Protein of unknown function (DUF808) FIV01_15020 PF00672 HAMP domain FIV01_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_15050 PF08447 PAS fold FIV01_15050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_15055 PF00072 Response regulator receiver domain FIV01_15075 PF01256 Carbohydrate kinase FIV01_15075 PF03853 YjeF-related protein N-terminus FIV01_15080 PF00478 IMP dehydrogenase / GMP reductase domain FIV01_15085 PF00145 C-5 cytosine-specific DNA methylase FIV01_15130 PF01514 Secretory protein of YscJ/FliF family FIV01_15200 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain FIV01_15200 PF03497 Anthrax toxin LF subunit FIV01_15205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_15205 PF18269 T3SS EscN ATPase C-terminal domain FIV01_15205 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV01_15225 PF00813 FliP family FIV01_15230 PF01313 Bacterial export proteins, family 3 FIV01_15235 PF01311 Bacterial export proteins, family 1 FIV01_15240 PF01312 FlhB HrpN YscU SpaS Family FIV01_15285 PF00771 FHIPEP family FIV01_15310 PF00884 Sulfatase FIV01_15315 PF00884 Sulfatase FIV01_15325 PF17863 AAA lid domain FIV01_15325 PF07726 ATPase family associated with various cellular activities (AAA) FIV01_15340 PF00092 von Willebrand factor type A domain FIV01_15355 PF03466 LysR substrate binding domain FIV01_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_15365 PF03781 Sulfatase-modifying factor enzyme 1 FIV01_15370 PF13186 Iron-sulfur cluster-binding domain FIV01_15370 PF04055 Radical SAM superfamily FIV01_15380 PF04143 Sulphur transport FIV01_15395 PF03477 ATP cone domain FIV01_15395 PF13597 Anaerobic ribonucleoside-triphosphate reductase FIV01_15420 PF12729 Four helix bundle sensory module for signal transduction FIV01_15420 PF00672 HAMP domain FIV01_15420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_15425 PF00294 pfkB family carbohydrate kinase FIV01_15440 PF02142 MGS-like domain FIV01_15445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV01_15450 PF00072 Response regulator receiver domain FIV01_15450 PF01627 Hpt domain FIV01_15450 PF00512 His Kinase A (phospho-acceptor) domain FIV01_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_15450 PF00672 HAMP domain FIV01_15455 PF00465 Iron-containing alcohol dehydrogenase FIV01_15460 PF06483 Chitinase C FIV01_15460 PF00704 Glycosyl hydrolases family 18 FIV01_15475 PF07685 CobB/CobQ-like glutamine amidotransferase domain FIV01_15475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV01_15485 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_15490 PF03459 TOBE domain FIV01_15490 PF00005 ABC transporter FIV01_15500 PF00563 EAL domain FIV01_15500 PF01590 GAF domain FIV01_15500 PF00990 Diguanylate cyclase, GGDEF domain FIV01_15500 PF00360 Phytochrome region FIV01_15515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FIV01_15515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV01_15515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV01_15520 PF02233 NAD(P) transhydrogenase beta subunit FIV01_15530 PF00486 Transcriptional regulatory protein, C terminal FIV01_15530 PF00072 Response regulator receiver domain FIV01_15545 PF03701 Uncharacterised protein family (UPF0181) FIV01_15725 PF01253 Translation initiation factor SUI1 FIV01_15735 PF01820 D-ala D-ala ligase N-terminus FIV01_15735 PF07478 D-ala D-ala ligase C-terminus FIV01_15745 PF00583 Acetyltransferase (GNAT) family FIV01_15745 PF13380 CoA binding domain FIV01_15745 PF13607 Succinyl-CoA ligase like flavodoxin domain FIV01_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_15750 PF03466 LysR substrate binding domain FIV01_15755 PF00593 TonB dependent receptor FIV01_15755 PF07715 TonB-dependent Receptor Plug Domain FIV01_15765 PF12793 Sugar transport-related sRNA regulator N-term FIV01_15765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_15775 PF03061 Thioesterase superfamily FIV01_15815 PF03466 LysR substrate binding domain FIV01_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_15825 PF12833 Helix-turn-helix domain FIV01_15850 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV01_15855 PF00456 Transketolase, thiamine diphosphate binding domain FIV01_15855 PF02780 Transketolase, C-terminal domain FIV01_15855 PF02779 Transketolase, pyrimidine binding domain FIV01_15860 PF00962 Adenosine/AMP deaminase FIV01_15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_15865 PF00672 HAMP domain FIV01_15870 PF01926 50S ribosome-binding GTPase FIV01_15875 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV01_15875 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV01_15880 PF00654 Voltage gated chloride channel FIV01_15895 PF00535 Glycosyl transferase family 2 FIV01_15895 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FIV01_15900 PF13476 AAA domain FIV01_15905 PF00149 Calcineurin-like phosphoesterase FIV01_15905 PF12320 Type 5 capsule protein repressor C-terminal domain FIV01_15910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV01_15910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV01_15915 PF07722 Peptidase C26 FIV01_15935 PF07690 Major Facilitator Superfamily FIV01_15950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_15950 PF00672 HAMP domain FIV01_15955 PF00676 Dehydrogenase E1 component FIV01_15960 PF02780 Transketolase, C-terminal domain FIV01_15960 PF02779 Transketolase, pyrimidine binding domain FIV01_15965 PF02817 e3 binding domain FIV01_15965 PF00364 Biotin-requiring enzyme FIV01_15965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV01_15970 PF17151 Periplasmic sensor domain FIV01_15970 PF00990 Diguanylate cyclase, GGDEF domain FIV01_15975 PF01012 Electron transfer flavoprotein domain FIV01_15975 PF00766 Electron transfer flavoprotein FAD-binding domain FIV01_15980 PF01012 Electron transfer flavoprotein domain FIV01_15995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV01_15995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV01_16000 PF00378 Enoyl-CoA hydratase/isomerase FIV01_16005 PF00378 Enoyl-CoA hydratase/isomerase FIV01_16010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV01_16010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV01_16010 PF02770 Acyl-CoA dehydrogenase, middle domain FIV01_16015 PF00171 Aldehyde dehydrogenase family FIV01_16020 PF00108 Thiolase, N-terminal domain FIV01_16020 PF02803 Thiolase, C-terminal domain FIV01_16025 PF00376 MerR family regulatory protein FIV01_16025 PF09278 MerR, DNA binding FIV01_16030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV01_16030 PF02770 Acyl-CoA dehydrogenase, middle domain FIV01_16030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV01_16035 PF01039 Carboxyl transferase domain FIV01_16040 PF00378 Enoyl-CoA hydratase/isomerase FIV01_16045 PF00682 HMGL-like FIV01_16050 PF00892 EamA-like transporter family FIV01_16055 PF07883 Cupin domain FIV01_16055 PF12833 Helix-turn-helix domain FIV01_16070 PF01039 Carboxyl transferase domain FIV01_16070 PF17848 Acetyl-coA carboxylase zinc finger domain FIV01_16100 PF00270 DEAD/DEAH box helicase FIV01_16100 PF00271 Helicase conserved C-terminal domain FIV01_16105 PF04336 Acyl carrier protein phosphodiesterase FIV01_16115 PF03222 Tryptophan/tyrosine permease family FIV01_16120 PF01625 Peptide methionine sulfoxide reductase FIV01_16120 PF01641 SelR domain FIV01_16125 PF00271 Helicase conserved C-terminal domain FIV01_16125 PF00270 DEAD/DEAH box helicase FIV01_16125 PF03880 DbpA RNA binding domain FIV01_16130 PF01227 GTP cyclohydrolase I FIV01_16135 PF03453 MoeA N-terminal region (domain I and II) FIV01_16135 PF03454 MoeA C-terminal region (domain IV) FIV01_16135 PF00994 Probable molybdopterin binding domain FIV01_16140 PF00899 ThiF family FIV01_16145 PF00581 Rhodanese-like domain FIV01_16150 PF00677 Lumazine binding domain FIV01_16160 PF00149 Calcineurin-like phosphoesterase FIV01_16160 PF02872 5'-nucleotidase, C-terminal domain FIV01_16165 PF11398 Protein of unknown function (DUF2813) FIV01_16170 PF04264 YceI-like domain FIV01_16175 PF01292 Prokaryotic cytochrome b561 FIV01_16185 PF16363 GDP-mannose 4,6 dehydratase FIV01_16190 PF03746 LamB/YcsF family FIV01_16200 PF02626 Carboxyltransferase domain, subdomain A and B FIV01_16215 PF00005 ABC transporter FIV01_16220 PF13472 GDSL-like Lipase/Acylhydrolase family FIV01_16225 PF03707 Bacterial signalling protein N terminal repeat FIV01_16225 PF13188 PAS domain FIV01_16225 PF00990 Diguanylate cyclase, GGDEF domain FIV01_16225 PF00563 EAL domain FIV01_16235 PF01556 DnaJ C terminal domain FIV01_16235 PF00684 DnaJ central domain FIV01_16235 PF00226 DnaJ domain FIV01_16240 PF03171 2OG-Fe(II) oxygenase superfamily FIV01_16240 PF14226 non-haem dioxygenase in morphine synthesis N-terminal FIV01_16250 PF03091 CutA1 divalent ion tolerance protein FIV01_16255 PF00580 UvrD/REP helicase N-terminal domain FIV01_16255 PF13361 UvrD-like helicase C-terminal domain FIV01_16255 PF12462 DNA helicase IV / RNA helicase N terminal FIV01_16260 PF12805 FUSC-like inner membrane protein yccS FIV01_16290 PF01266 FAD dependent oxidoreductase FIV01_16290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIV01_16295 PF00072 Response regulator receiver domain FIV01_16295 PF09308 LuxQ, periplasmic FIV01_16295 PF00512 His Kinase A (phospho-acceptor) domain FIV01_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_16300 PF13407 Periplasmic binding protein domain FIV01_16310 PF01541 GIY-YIG catalytic domain FIV01_16330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV01_16330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV01_16335 PF00230 Major intrinsic protein FIV01_16350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FIV01_16350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV01_16355 PF02545 Maf-like protein FIV01_16355 PF00293 NUDIX domain FIV01_16360 PF08443 RimK-like ATP-grasp domain FIV01_16360 PF18030 RimK PreATP-grasp domain FIV01_16365 PF00155 Aminotransferase class I and II FIV01_16400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_16400 PF00512 His Kinase A (phospho-acceptor) domain FIV01_16400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_16415 PF00990 Diguanylate cyclase, GGDEF domain FIV01_16415 PF17158 Membrane-associated sensor, integral membrane domain FIV01_16420 PF07690 Major Facilitator Superfamily FIV01_16445 PF00005 ABC transporter FIV01_16445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_16450 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_16450 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV01_16455 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_16460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_16470 PF17200 Single Cache domain 2 FIV01_16470 PF00672 HAMP domain FIV01_16470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_16475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV01_16475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV01_16480 PF13654 AAA domain FIV01_16480 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV01_16490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV01_16490 PF00005 ABC transporter FIV01_16495 PF03466 LysR substrate binding domain FIV01_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_16500 PF02652 L-lactate permease FIV01_16505 PF01070 FMN-dependent dehydrogenase FIV01_16510 PF02567 Phenazine biosynthesis-like protein FIV01_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_16570 PF03466 LysR substrate binding domain FIV01_16575 PF00892 EamA-like transporter family FIV01_16590 PF00571 CBS domain FIV01_16590 PF00005 ABC transporter FIV01_16595 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_16600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIV01_16605 PF00732 GMC oxidoreductase FIV01_16605 PF05199 GMC oxidoreductase FIV01_16615 PF00440 Bacterial regulatory proteins, tetR family FIV01_16615 PF13977 BetI-type transcriptional repressor, C-terminal FIV01_16635 PF04231 Endonuclease I FIV01_16645 PF01042 Endoribonuclease L-PSP FIV01_16655 PF13188 PAS domain FIV01_16655 PF00990 Diguanylate cyclase, GGDEF domain FIV01_16655 PF03707 Bacterial signalling protein N terminal repeat FIV01_16655 PF00563 EAL domain FIV01_16660 PF00571 CBS domain FIV01_16660 PF01769 Divalent cation transporter FIV01_16660 PF03448 MgtE intracellular N domain FIV01_16665 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FIV01_16665 PF01648 4'-phosphopantetheinyl transferase superfamily FIV01_16670 PF00202 Aminotransferase class-III FIV01_16675 PF00202 Aminotransferase class-III FIV01_16685 PF00550 Phosphopantetheine attachment site FIV01_16685 PF00975 Thioesterase domain FIV01_16685 PF13193 AMP-binding enzyme C-terminal domain FIV01_16685 PF00668 Condensation domain FIV01_16685 PF00501 AMP-binding enzyme FIV01_16690 PF00550 Phosphopantetheine attachment site FIV01_16690 PF00668 Condensation domain FIV01_16690 PF13193 AMP-binding enzyme C-terminal domain FIV01_16690 PF00501 AMP-binding enzyme FIV01_16695 PF02567 Phenazine biosynthesis-like protein FIV01_16700 PF01979 Amidohydrolase family FIV01_16705 PF00271 Helicase conserved C-terminal domain FIV01_16705 PF00270 DEAD/DEAH box helicase FIV01_16720 PF00141 Peroxidase FIV01_16725 PF13419 Haloacid dehalogenase-like hydrolase FIV01_16730 PF02798 Glutathione S-transferase, N-terminal domain FIV01_16750 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FIV01_16750 PF14489 QueF-like protein FIV01_16770 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FIV01_16775 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FIV01_16780 PF13520 Amino acid permease FIV01_16795 PF00206 Lyase FIV01_16795 PF10415 Fumarase C C-terminus FIV01_16810 PF16736 Single Cache-like FIV01_16810 PF00989 PAS fold FIV01_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_16810 PF00512 His Kinase A (phospho-acceptor) domain FIV01_16815 PF00486 Transcriptional regulatory protein, C terminal FIV01_16815 PF00072 Response regulator receiver domain FIV01_16845 PF11975 Family 4 glycosyl hydrolase C-terminal domain FIV01_16845 PF02056 Family 4 glycosyl hydrolase FIV01_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_16850 PF03466 LysR substrate binding domain FIV01_16860 PF03466 LysR substrate binding domain FIV01_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_16875 PF08534 Redoxin FIV01_16880 PF08534 Redoxin FIV01_16895 PF00873 AcrB/AcrD/AcrF family FIV01_16900 PF00529 HlyD membrane-fusion protein of T1SS FIV01_16900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_16910 PF03707 Bacterial signalling protein N terminal repeat FIV01_16910 PF00990 Diguanylate cyclase, GGDEF domain FIV01_16910 PF00563 EAL domain FIV01_16925 PF03116 NQR2, RnfD, RnfE family FIV01_16930 PF13599 Pentapeptide repeats (9 copies) FIV01_16935 PF01641 SelR domain FIV01_16935 PF01625 Peptide methionine sulfoxide reductase FIV01_16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_16940 PF00672 HAMP domain FIV01_16945 PF00563 EAL domain FIV01_16945 PF04940 Sensors of blue-light using FAD FIV01_16950 PF11852 Domain of unknown function (DUF3372) FIV01_16950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV01_16950 PF03714 Bacterial pullanase-associated domain FIV01_16950 PF18494 Pullulanase Ins domain FIV01_16950 PF17967 Pullulanase N2 domain FIV01_16955 PF00376 MerR family regulatory protein FIV01_16955 PF09278 MerR, DNA binding FIV01_16960 PF00672 HAMP domain FIV01_16960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_16960 PF12729 Four helix bundle sensory module for signal transduction FIV01_16970 PF00005 ABC transporter FIV01_16970 PF08402 TOBE domain FIV01_16980 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_16995 PF07702 UTRA domain FIV01_16995 PF00392 Bacterial regulatory proteins, gntR family FIV01_17000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_17000 PF00672 HAMP domain FIV01_17000 PF02743 Cache domain FIV01_17005 PF00672 HAMP domain FIV01_17005 PF12729 Four helix bundle sensory module for signal transduction FIV01_17005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_17010 PF07148 Maltose operon periplasmic protein precursor (MalM) FIV01_17015 PF02264 LamB porin FIV01_17020 PF00128 Alpha amylase, catalytic domain FIV01_17020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV01_17035 PF01227 GTP cyclohydrolase I FIV01_17040 PF02152 Dihydroneopterin aldolase FIV01_17050 PF12843 Putative quorum-sensing-regulated virulence factor FIV01_17060 PF00768 D-alanyl-D-alanine carboxypeptidase FIV01_17060 PF07943 Penicillin-binding protein 5, C-terminal domain FIV01_17075 PF00313 'Cold-shock' DNA-binding domain FIV01_17090 PF00175 Oxidoreductase NAD-binding domain FIV01_17090 PF00970 Oxidoreductase FAD-binding domain FIV01_17090 PF00042 Globin FIV01_17095 PF00158 Sigma-54 interaction domain FIV01_17095 PF01590 GAF domain FIV01_17110 PF00892 EamA-like transporter family FIV01_17115 PF00462 Glutaredoxin FIV01_17125 PF07690 Major Facilitator Superfamily FIV01_17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_17130 PF03466 LysR substrate binding domain FIV01_17135 PF08448 PAS fold FIV01_17135 PF08447 PAS fold FIV01_17135 PF00990 Diguanylate cyclase, GGDEF domain FIV01_17135 PF00563 EAL domain FIV01_17140 PF01467 Cytidylyltransferase-like FIV01_17145 PF02540 NAD synthase FIV01_17150 PF00196 Bacterial regulatory proteins, luxR family FIV01_17160 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV01_17160 PF01571 Aminomethyltransferase folate-binding domain FIV01_17170 PF00464 Serine hydroxymethyltransferase FIV01_17175 PF01597 Glycine cleavage H-protein FIV01_17180 PF02347 Glycine cleavage system P-protein FIV01_17190 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_17190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_17190 PF00512 His Kinase A (phospho-acceptor) domain FIV01_17195 PF11849 Domain of unknown function (DUF3369) FIV01_17215 PF13340 Putative transposase of IS4/5 family (DUF4096) FIV01_17230 PF00563 EAL domain FIV01_17230 PF00990 Diguanylate cyclase, GGDEF domain FIV01_17235 PF03466 LysR substrate binding domain FIV01_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_17245 PF03707 Bacterial signalling protein N terminal repeat FIV01_17245 PF00990 Diguanylate cyclase, GGDEF domain FIV01_17245 PF00563 EAL domain FIV01_17270 PF07504 Fungalysin/Thermolysin Propeptide Motif FIV01_17270 PF01447 Thermolysin metallopeptidase, catalytic domain FIV01_17270 PF02868 Thermolysin metallopeptidase, alpha-helical domain FIV01_17270 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_17270 PF03413 Peptidase propeptide and YPEB domain FIV01_17280 PF13426 PAS domain FIV01_17280 PF08447 PAS fold FIV01_17280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_17285 PF00924 Mechanosensitive ion channel FIV01_17290 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV01_17300 PF00793 DAHP synthetase I family FIV01_17305 PF00005 ABC transporter FIV01_17310 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_17315 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_17320 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_17325 PF01040 UbiA prenyltransferase family FIV01_17330 PF02628 Cytochrome oxidase assembly protein FIV01_17345 PF00510 Cytochrome c oxidase subunit III FIV01_17350 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FIV01_17355 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV01_17360 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FIV01_17360 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIV01_17365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV01_17365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV01_17365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV01_17365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV01_17380 PF00391 PEP-utilising enzyme, mobile domain FIV01_17380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FIV01_17380 PF02896 PEP-utilising enzyme, TIM barrel domain FIV01_17390 PF00970 Oxidoreductase FAD-binding domain FIV01_17390 PF00175 Oxidoreductase NAD-binding domain FIV01_17415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FIV01_17415 PF02753 Pili assembly chaperone PapD, C-terminal domain FIV01_17420 PF13954 PapC N-terminal domain FIV01_17420 PF00577 Outer membrane usher protein FIV01_17420 PF13953 PapC C-terminal domain FIV01_17430 PF00486 Transcriptional regulatory protein, C terminal FIV01_17460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV01_17460 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV01_17460 PF18269 T3SS EscN ATPase C-terminal domain FIV01_17480 PF00813 FliP family FIV01_17500 PF00486 Transcriptional regulatory protein, C terminal FIV01_17535 PF01312 FlhB HrpN YscU SpaS Family FIV01_17540 PF00771 FHIPEP family FIV01_17615 PF05726 Pirin C-terminal cupin domain FIV01_17615 PF02678 Pirin FIV01_17635 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV01_17650 PF00691 OmpA family FIV01_17660 PF14319 Transposase zinc-binding domain FIV01_17660 PF04986 Putative transposase FIV01_17665 PF00472 RF-1 domain FIV01_17690 PF03372 Endonuclease/Exonuclease/phosphatase family FIV01_17700 PF00270 DEAD/DEAH box helicase FIV01_17700 PF00271 Helicase conserved C-terminal domain FIV01_17715 PF03734 L,D-transpeptidase catalytic domain FIV01_17715 PF01476 LysM domain FIV01_17715 PF17969 L,D-transpeptidase C-terminal domain FIV01_17720 PF03441 FAD binding domain of DNA photolyase FIV01_17720 PF00875 DNA photolyase FIV01_17725 PF13411 MerR HTH family regulatory protein FIV01_17730 PF08349 Protein of unknown function (DUF1722) FIV01_17735 PF01048 Phosphorylase superfamily FIV01_17745 PF11742 Protein of unknown function (DUF3302) FIV01_17750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_17750 PF00529 HlyD membrane-fusion protein of T1SS FIV01_17755 PF03616 Sodium/glutamate symporter FIV01_17770 PF00202 Aminotransferase class-III FIV01_17780 PF16868 NMT1-like family FIV01_17790 PF00005 ABC transporter FIV01_17790 PF00664 ABC transporter transmembrane region FIV01_17820 PF03466 LysR substrate binding domain FIV01_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_17835 PF00701 Dihydrodipicolinate synthetase family FIV01_17845 PF00155 Aminotransferase class I and II FIV01_17845 PF00392 Bacterial regulatory proteins, gntR family FIV01_17860 PF03824 High-affinity nickel-transport protein FIV01_17870 PF00892 EamA-like transporter family FIV01_17875 PF10100 Staphylopine dehydrogenase FIV01_17880 PF03059 Nicotianamine synthase protein FIV01_17885 PF00005 ABC transporter FIV01_17890 PF01032 FecCD transport family FIV01_17910 PF01906 Putative heavy-metal-binding FIV01_17945 PF13556 PucR C-terminal helix-turn-helix domain FIV01_17945 PF05651 Putative sugar diacid recognition FIV01_17945 PF17853 GGDEF-like domain FIV01_17950 PF02447 GntP family permease FIV01_17955 PF02595 Glycerate kinase family FIV01_17960 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FIV01_17960 PF15645 Dermonecrotoxin of the Papain-like fold FIV01_17975 PF01037 Lrp/AsnC ligand binding domain FIV01_17980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIV01_17985 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_17990 PF00005 ABC transporter FIV01_17990 PF00571 CBS domain FIV01_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_18000 PF03466 LysR substrate binding domain FIV01_18010 PF16123 Hydroxyacylglutathione hydrolase C-terminus FIV01_18010 PF00753 Metallo-beta-lactamase superfamily FIV01_18015 PF00474 Sodium:solute symporter family FIV01_18025 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FIV01_18025 PF01619 Proline dehydrogenase FIV01_18025 PF00171 Aldehyde dehydrogenase family FIV01_18025 PF14850 DNA-binding domain of Proline dehydrogenase FIV01_18030 PF12833 Helix-turn-helix domain FIV01_18040 PF03781 Sulfatase-modifying factor enzyme 1 FIV01_18060 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FIV01_18060 PF13632 Glycosyl transferase family group 2 FIV01_18150 PF12833 Helix-turn-helix domain FIV01_18155 PF13302 Acetyltransferase (GNAT) domain FIV01_18185 PF08241 Methyltransferase domain FIV01_18190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV01_18240 PF00375 Sodium:dicarboxylate symporter family FIV01_18245 PF02806 Alpha amylase, C-terminal all-beta domain FIV01_18245 PF00128 Alpha amylase, catalytic domain FIV01_18245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FIV01_18250 PF02446 4-alpha-glucanotransferase FIV01_18255 PF00343 Carbohydrate phosphorylase FIV01_18260 PF00196 Bacterial regulatory proteins, luxR family FIV01_18260 PF17874 MalT-like TPR region FIV01_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_18265 PF03466 LysR substrate binding domain FIV01_18285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_18285 PF00512 His Kinase A (phospho-acceptor) domain FIV01_18290 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV01_18300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV01_18300 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV01_18330 PF00939 Sodium:sulfate symporter transmembrane region FIV01_18335 PF01124 MAPEG family FIV01_18370 PF01569 PAP2 superfamily FIV01_18375 PF08543 Phosphomethylpyrimidine kinase FIV01_18390 PF01168 Alanine racemase, N-terminal domain FIV01_18390 PF14031 Putative serine dehydratase domain FIV01_18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18400 PF17200 Single Cache domain 2 FIV01_18400 PF00672 HAMP domain FIV01_18405 PF00905 Penicillin binding protein transpeptidase domain FIV01_18405 PF03717 Penicillin-binding Protein dimerisation domain FIV01_18410 PF00582 Universal stress protein family FIV01_18420 PF00990 Diguanylate cyclase, GGDEF domain FIV01_18420 PF00072 Response regulator receiver domain FIV01_18430 PF00672 HAMP domain FIV01_18430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18430 PF02743 Cache domain FIV01_18435 PF00072 Response regulator receiver domain FIV01_18435 PF01339 CheB methylesterase FIV01_18440 PF03975 CheD chemotactic sensory transduction FIV01_18445 PF03705 CheR methyltransferase, all-alpha domain FIV01_18445 PF01739 CheR methyltransferase, SAM binding domain FIV01_18450 PF00672 HAMP domain FIV01_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18450 PF02203 Tar ligand binding domain homologue FIV01_18455 PF01584 CheW-like domain FIV01_18460 PF01584 CheW-like domain FIV01_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_18465 PF01627 Hpt domain FIV01_18465 PF01584 CheW-like domain FIV01_18465 PF09078 CheY binding FIV01_18465 PF02895 Signal transducing histidine kinase, homodimeric domain FIV01_18470 PF00072 Response regulator receiver domain FIV01_18480 PF05127 Helicase FIV01_18480 PF13718 GNAT acetyltransferase 2 FIV01_18485 PF08775 ParB family FIV01_18485 PF02195 ParB-like nuclease domain FIV01_18490 PF18607 ParA helix turn helix domain FIV01_18490 PF13614 AAA domain FIV01_18515 PF01709 Transcriptional regulator FIV01_18525 PF01047 MarR family FIV01_18535 PF12729 Four helix bundle sensory module for signal transduction FIV01_18535 PF00672 HAMP domain FIV01_18535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18540 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV01_18545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIV01_18545 PF06481 COX Aromatic Rich Motif FIV01_18550 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV01_18555 PF00510 Cytochrome c oxidase subunit III FIV01_18565 PF01040 UbiA prenyltransferase family FIV01_18580 PF00672 HAMP domain FIV01_18580 PF16591 Helical bimodular sensor domain FIV01_18580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18595 PF04273 Putative phosphatase (DUF442) FIV01_18595 PF00753 Metallo-beta-lactamase superfamily FIV01_18605 PF13005 zinc-finger binding domain of transposase IS66 FIV01_18605 PF13007 Transposase C of IS166 homeodomain FIV01_18605 PF03050 Transposase IS66 family FIV01_18605 PF13817 IS66 C-terminal element FIV01_18620 PF00291 Pyridoxal-phosphate dependent enzyme FIV01_18630 PF01168 Alanine racemase, N-terminal domain FIV01_18650 PF00576 HIUase/Transthyretin family FIV01_18675 PF00248 Aldo/keto reductase family FIV01_18715 PF00313 'Cold-shock' DNA-binding domain FIV01_18730 PF13840 ACT domain FIV01_18730 PF00696 Amino acid kinase family FIV01_18745 PF09349 OHCU decarboxylase FIV01_18745 PF01014 Uricase FIV01_18750 PF03561 Allantoicase repeat FIV01_18755 PF04115 Ureidoglycolate lyase FIV01_18770 PF00672 HAMP domain FIV01_18770 PF00072 Response regulator receiver domain FIV01_18770 PF01627 Hpt domain FIV01_18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_18770 PF00512 His Kinase A (phospho-acceptor) domain FIV01_18770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_18780 PF01979 Amidohydrolase family FIV01_18790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV01_18790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV01_18795 PF01799 [2Fe-2S] binding domain FIV01_18795 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV01_18800 PF00082 Subtilase family FIV01_18800 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_18800 PF05922 Peptidase inhibitor I9 FIV01_18805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18805 PF17200 Single Cache domain 2 FIV01_18805 PF00672 HAMP domain FIV01_18810 PF10928 Protein of unknown function (DUF2810) FIV01_18825 PF06029 AlkA N-terminal domain FIV01_18825 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV01_18830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV01_18830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV01_18840 PF03600 Citrate transporter FIV01_18855 PF00375 Sodium:dicarboxylate symporter family FIV01_18860 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FIV01_18885 PF02630 SCO1/SenC FIV01_18905 PF01966 HD domain FIV01_18910 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FIV01_18915 PF00704 Glycosyl hydrolases family 18 FIV01_18915 PF08329 Chitinase A, N-terminal domain FIV01_18925 PF00925 GTP cyclohydrolase II FIV01_18930 PF03412 Peptidase C39 family FIV01_18930 PF00005 ABC transporter FIV01_18930 PF00664 ABC transporter transmembrane region FIV01_18945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV01_18945 PF00529 HlyD membrane-fusion protein of T1SS FIV01_18950 PF13426 PAS domain FIV01_18950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_18950 PF08447 PAS fold FIV01_18955 PF01740 STAS domain FIV01_18960 PF13581 Histidine kinase-like ATPase domain FIV01_18970 PF00512 His Kinase A (phospho-acceptor) domain FIV01_18970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_18970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_18970 PF00072 Response regulator receiver domain FIV01_18970 PF01627 Hpt domain FIV01_18970 PF00672 HAMP domain FIV01_18975 PF00072 Response regulator receiver domain FIV01_18990 PF12793 Sugar transport-related sRNA regulator N-term FIV01_18990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV01_18995 PF00881 Nitroreductase family FIV01_19020 PF13629 Pilus formation protein N terminal region FIV01_19020 PF00263 Bacterial type II and III secretion system protein FIV01_19020 PF04972 BON domain FIV01_19030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV01_19035 PF00437 Type II/IV secretion system protein FIV01_19085 PF02424 ApbE family FIV01_19090 PF11412 Disulphide bond corrector protein DsbC FIV01_19090 PF02683 Cytochrome C biogenesis protein transmembrane region FIV01_19095 PF00171 Aldehyde dehydrogenase family FIV01_19100 PF12849 PBP superfamily domain FIV01_19105 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_19110 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_19115 PF00005 ABC transporter FIV01_19120 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain FIV01_19120 PF03497 Anthrax toxin LF subunit FIV01_19125 PF00375 Sodium:dicarboxylate symporter family FIV01_19130 PF12833 Helix-turn-helix domain FIV01_19200 PF01434 Peptidase family M41 FIV01_19200 PF17862 AAA+ lid domain FIV01_19200 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_19220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FIV01_19235 PF00892 EamA-like transporter family FIV01_19240 PF00583 Acetyltransferase (GNAT) family FIV01_19245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_19245 PF02743 Cache domain FIV01_19245 PF00672 HAMP domain FIV01_19250 PF07238 PilZ domain FIV01_19250 PF12945 Flagellar protein YcgR FIV01_19260 PF00588 SpoU rRNA Methylase family FIV01_19260 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV01_19265 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FIV01_19270 PF03466 LysR substrate binding domain FIV01_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_19285 PF00875 DNA photolyase FIV01_19285 PF03441 FAD binding domain of DNA photolyase FIV01_19290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FIV01_19300 PF03733 Inner membrane component domain FIV01_19305 PF01447 Thermolysin metallopeptidase, catalytic domain FIV01_19305 PF07504 Fungalysin/Thermolysin Propeptide Motif FIV01_19305 PF03413 Peptidase propeptide and YPEB domain FIV01_19305 PF02868 Thermolysin metallopeptidase, alpha-helical domain FIV01_19305 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_19310 PF04389 Peptidase family M28 FIV01_19310 PF04151 Bacterial pre-peptidase C-terminal domain FIV01_19315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FIV01_19320 PF07968 Leukocidin/Hemolysin toxin family FIV01_19320 PF16458 Beta-prism lectin FIV01_19320 PF12563 Hemolytic toxin N terminal FIV01_19325 PF03301 Tryptophan 2,3-dioxygenase FIV01_19345 PF13443 Cro/C1-type HTH DNA-binding domain FIV01_19365 PF02028 BCCT, betaine/carnitine/choline family transporter FIV01_19370 PF01523 Putative modulator of DNA gyrase FIV01_19375 PF01523 Putative modulator of DNA gyrase FIV01_19380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FIV01_19385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_19385 PF00672 HAMP domain FIV01_19385 PF02743 Cache domain FIV01_19400 PF00005 ABC transporter FIV01_19410 PF01032 FecCD transport family FIV01_19430 PF04324 BFD-like [2Fe-2S] binding domain FIV01_19430 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV01_19435 PF01266 FAD dependent oxidoreductase FIV01_19445 PF08525 Opacity-associated protein A N-terminal motif FIV01_19445 PF01476 LysM domain FIV01_19445 PF01551 Peptidase family M23 FIV01_19450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_19455 PF03922 OmpW family FIV01_19465 PF00082 Subtilase family FIV01_19480 PF03466 LysR substrate binding domain FIV01_19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_19490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV01_19510 PF00664 ABC transporter transmembrane region FIV01_19510 PF00005 ABC transporter FIV01_19585 PF00583 Acetyltransferase (GNAT) family FIV01_19640 PF02225 PA domain FIV01_19640 PF04389 Peptidase family M28 FIV01_19645 PF00891 O-methyltransferase domain FIV01_19650 PF00550 Phosphopantetheine attachment site FIV01_19650 PF00975 Thioesterase domain FIV01_19650 PF00668 Condensation domain FIV01_19650 PF00501 AMP-binding enzyme FIV01_19650 PF13193 AMP-binding enzyme C-terminal domain FIV01_19655 PF00668 Condensation domain FIV01_19655 PF13193 AMP-binding enzyme C-terminal domain FIV01_19655 PF00501 AMP-binding enzyme FIV01_19655 PF00550 Phosphopantetheine attachment site FIV01_19655 PF00975 Thioesterase domain FIV01_19660 PF00550 Phosphopantetheine attachment site FIV01_19660 PF00501 AMP-binding enzyme FIV01_19660 PF13193 AMP-binding enzyme C-terminal domain FIV01_19660 PF00975 Thioesterase domain FIV01_19660 PF00668 Condensation domain FIV01_19665 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV01_19665 PF00668 Condensation domain FIV01_19665 PF00550 Phosphopantetheine attachment site FIV01_19665 PF00698 Acyl transferase domain FIV01_19665 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV01_19665 PF16197 Ketoacyl-synthetase C-terminal extension FIV01_19670 PF00550 Phosphopantetheine attachment site FIV01_19670 PF00501 AMP-binding enzyme FIV01_19670 PF13193 AMP-binding enzyme C-terminal domain FIV01_19670 PF00668 Condensation domain FIV01_19675 PF00975 Thioesterase domain FIV01_19675 PF00550 Phosphopantetheine attachment site FIV01_19675 PF00668 Condensation domain FIV01_19675 PF13193 AMP-binding enzyme C-terminal domain FIV01_19675 PF00501 AMP-binding enzyme FIV01_19680 PF07690 Major Facilitator Superfamily FIV01_19690 PF16884 N-terminal domain of oxidoreductase FIV01_19690 PF00107 Zinc-binding dehydrogenase FIV01_19695 PF13533 Biotin-lipoyl like FIV01_19705 PF00072 Response regulator receiver domain FIV01_19705 PF00486 Transcriptional regulatory protein, C terminal FIV01_19710 PF08521 Two-component sensor kinase N-terminal FIV01_19710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_19710 PF00512 His Kinase A (phospho-acceptor) domain FIV01_19715 PF00012 Hsp70 protein FIV01_19730 PF12833 Helix-turn-helix domain FIV01_19745 PF01117 Aerolysin toxin FIV01_19745 PF03440 Aerolysin/Pertussis toxin (APT) domain FIV01_19750 PF03880 DbpA RNA binding domain FIV01_19750 PF00270 DEAD/DEAH box helicase FIV01_19750 PF00271 Helicase conserved C-terminal domain FIV01_19755 PF00575 S1 RNA binding domain FIV01_19755 PF08206 Ribonuclease B OB domain FIV01_19755 PF00773 RNB domain FIV01_19760 PF12849 PBP superfamily domain FIV01_19770 PF00005 ABC transporter FIV01_19775 PF01032 FecCD transport family FIV01_19785 PF02472 Biopolymer transport protein ExbD/TolR FIV01_19790 PF01618 MotA/TolQ/ExbB proton channel family FIV01_19795 PF03544 Gram-negative bacterial TonB protein C-terminal FIV01_19800 PF06228 Haem utilisation ChuX/HutX FIV01_19805 PF01243 Pyridoxamine 5'-phosphate oxidase FIV01_19810 PF08402 TOBE domain FIV01_19810 PF00005 ABC transporter FIV01_19815 PF01547 Bacterial extracellular solute-binding protein FIV01_19820 PF14785 Maltose transport system permease protein MalF P2 domain FIV01_19820 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_19825 PF00528 Binding-protein-dependent transport system inner membrane component FIV01_19850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV01_19850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV01_19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV01_19855 PF00672 HAMP domain FIV01_19855 PF01627 Hpt domain FIV01_19855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV01_19855 PF00072 Response regulator receiver domain FIV01_19855 PF00512 His Kinase A (phospho-acceptor) domain FIV01_19860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV01_19875 PF13533 Biotin-lipoyl like FIV01_19895 PF00392 Bacterial regulatory proteins, gntR family FIV01_19895 PF00155 Aminotransferase class I and II FIV01_19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_19905 PF03466 LysR substrate binding domain FIV01_19915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV01_19920 PF02566 OsmC-like protein FIV01_19925 PF00892 EamA-like transporter family FIV01_19945 PF13519 von Willebrand factor type A domain FIV01_19950 PF07584 Aerotolerance regulator N-terminal FIV01_19950 PF00092 von Willebrand factor type A domain FIV01_19960 PF01882 Protein of unknown function DUF58 FIV01_19965 PF07726 ATPase family associated with various cellular activities (AAA) FIV01_19965 PF17863 AAA lid domain FIV01_19975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV01_19975 PF00672 HAMP domain FIV01_19975 PF12729 Four helix bundle sensory module for signal transduction FIV01_19980 PF00248 Aldo/keto reductase family FIV01_19985 PF00248 Aldo/keto reductase family FIV01_19995 PF00248 Aldo/keto reductase family FIV01_20015 PF08212 Lipocalin-like domain FIV01_20025 PF00849 RNA pseudouridylate synthase FIV01_20030 PF07690 Major Facilitator Superfamily FIV01_20045 PF00756 Putative esterase FIV01_20050 PF08240 Alcohol dehydrogenase GroES-like domain FIV01_20050 PF00107 Zinc-binding dehydrogenase FIV01_20070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV01_20070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV01_20070 PF02824 TGS domain FIV01_20070 PF03129 Anticodon binding domain FIV01_20075 PF00707 Translation initiation factor IF-3, C-terminal domain FIV01_20075 PF05198 Translation initiation factor IF-3, N-terminal domain FIV01_20080 PF01632 Ribosomal protein L35 FIV01_20090 PF01266 FAD dependent oxidoreductase FIV01_20100 PF00171 Aldehyde dehydrogenase family FIV01_20105 PF00158 Sigma-54 interaction domain FIV01_20105 PF02954 Bacterial regulatory protein, Fis family FIV01_20105 PF01590 GAF domain FIV01_20120 PF00704 Glycosyl hydrolases family 18 FIV01_20125 PF08525 Opacity-associated protein A N-terminal motif FIV01_20125 PF01476 LysM domain FIV01_20125 PF01551 Peptidase family M23 FIV01_20160 PF00004 ATPase family associated with various cellular activities (AAA) FIV01_20160 PF07724 AAA domain (Cdc48 subfamily) FIV01_20160 PF10431 C-terminal, D2-small domain, of ClpB protein FIV01_20160 PF17871 AAA lid domain FIV01_20165 PF05638 Type VI secretion system effector, Hcp FIV01_20170 PF04717 Type VI secretion system, phage-baseplate injector FIV01_20195 PF03793 PASTA domain FIV01_20195 PF00069 Protein kinase domain FIV01_20240 PF01037 Lrp/AsnC ligand binding domain FIV01_20280 PF00106 short chain dehydrogenase FIV01_20285 PF00108 Thiolase, N-terminal domain FIV01_20285 PF02803 Thiolase, C-terminal domain FIV01_20295 PF00561 alpha/beta hydrolase fold FIV01_20295 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FIV01_20310 PF01177 Asp/Glu/Hydantoin racemase FIV01_20315 PF01980 tRNA-methyltransferase O FIV01_20320 PF00657 GDSL-like Lipase/Acylhydrolase FIV01_20325 PF05547 Immune inhibitor A peptidase M6 FIV01_20325 PF00801 PKD domain FIV01_20335 PF00579 tRNA synthetases class I (W and Y) FIV01_20340 PF00892 EamA-like transporter family FIV01_20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_20345 PF03466 LysR substrate binding domain FIV01_20350 PF00155 Aminotransferase class I and II FIV01_20355 PF08240 Alcohol dehydrogenase GroES-like domain FIV01_20355 PF00107 Zinc-binding dehydrogenase FIV01_20360 PF00194 Eukaryotic-type carbonic anhydrase FIV01_20395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_20395 PF03466 LysR substrate binding domain FIV01_20405 PF13193 AMP-binding enzyme C-terminal domain FIV01_20405 PF00501 AMP-binding enzyme FIV01_20410 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FIV01_20415 PF01329 Pterin 4 alpha carbinolamine dehydratase FIV01_20450 PF07549 SecD/SecF GG Motif FIV01_20450 PF02355 Protein export membrane protein FIV01_20450 PF13721 SecD export protein N-terminal TM region FIV01_20455 PF02355 Protein export membrane protein FIV01_20455 PF07549 SecD/SecF GG Motif FIV01_20475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV01_20475 PF03466 LysR substrate binding domain FIV01_20480 PF13419 Haloacid dehalogenase-like hydrolase FIV01_20495 PF03315 Serine dehydratase beta chain FIV01_20495 PF03313 Serine dehydratase alpha chain FIV01_20515 PF00990 Diguanylate cyclase, GGDEF domain FIV01_20520 PF01584 CheW-like domain FIV01_20520 PF00072 Response regulator receiver domain FIV01_20600 PF02796 Helix-turn-helix domain of resolvase FIV01_20600 PF00239 Resolvase, N terminal domain FIV01_20665 PF13614 AAA domain FIV01_20780 PF00574 Clp protease