locus-tag	class	description
FIV04_00010	COG0592	DNA-directed DNA polymerase activity
FIV04_00020	COG0187	DNA topoisomerase II activity
FIV04_00025	COG0071	Belongs to the small heat shock protein (HSP20) family
FIV04_00030	COG3977	Valine--pyruvate aminotransferase
FIV04_00035	COG0366	Alpha amylase catalytic
FIV04_00040	COG0751	glycine-tRNA ligase activity
FIV04_00050	COG2119	membrane
FIV04_00075	COG0604	alcohol dehydrogenase
FIV04_00090	COG1739	Uncharacterized protein family UPF0029
FIV04_00095	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIV04_00140	COG0583	DNA-binding transcription factor activity
FIV04_00150	COG2960	long-chain fatty acid transporting porin activity
FIV04_00155	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_00160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_00165	COG1309	transcriptional regulator
FIV04_00220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIV04_00275	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIV04_00285	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FIV04_00290	COG0339	signal peptide processing
FIV04_00295	COG1522	sequence-specific DNA binding
FIV04_00300	COG5002	protein histidine kinase activity
FIV04_00300	COG5001	Diguanylate cyclase
FIV04_00315	COG0697	spore germination
FIV04_00320	COG0589	response to stress
FIV04_00325	COG1528	Iron-storage protein
FIV04_00335	COG2081	HI0933 family
FIV04_00345	COG1322	Protein conserved in bacteria
FIV04_00350	COG2226	methyltransferase
FIV04_00355	COG3165	ubiquinone biosynthetic process from chorismate
FIV04_00370	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FIV04_00375	COG0805	protein transport
FIV04_00385	COG0084	hydrolase, TatD family'
FIV04_00405	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FIV04_00405	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FIV04_00445	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIV04_00455	COG2204	response regulator
FIV04_00460	COG3852	Histidine kinase
FIV04_00470	COG0174	glutamine synthetase
FIV04_00500	COG0456	acetyltransferase
FIV04_00520	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FIV04_00525	COG3031	protein transport across the cell outer membrane
FIV04_00535	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIV04_00540	COG1459	type II secretion system
FIV04_00545	COG2165	general secretion pathway protein
FIV04_00550	COG2165	general secretion pathway protein
FIV04_00555	COG2165	general secretion pathway protein
FIV04_00560	COG4795	General secretion pathway protein
FIV04_00565	COG3156	type II secretion system protein K
FIV04_00570	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FIV04_00575	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FIV04_00585	COG1218	3'(2'),5'-bisphosphate nucleotidase
FIV04_00590	COG0494	nUDIX hydrolase
FIV04_00600	COG1040	competence protein
FIV04_00615	COG2183	response to ionizing radiation
FIV04_00625	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIV04_00630	COG0745	RESPONSE REGULATOR receiver
FIV04_00640	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FIV04_00645	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIV04_00660	COG2252	PERMEase
FIV04_00685	COG1561	YicC-like family, N-terminal region
FIV04_00700	COG1560	Kdo2-lipid A biosynthetic process
FIV04_00730	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FIV04_00760	COG0859	PFAM glycosyl transferase family 9
FIV04_00765	COG0463	Glycosyl transferase, family 2
FIV04_00770	COG0859	PFAM glycosyl transferase family 9
FIV04_00775	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FIV04_00780	COG3642	lipopolysaccharide core region biosynthetic process
FIV04_00785	COG3083	sulfuric ester hydrolase activity
FIV04_00805	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIV04_00810	COG0673	inositol 2-dehydrogenase activity
FIV04_00820	COG0463	Glycosyl transferase, family 2
FIV04_00830	COG0297	glycogen (starch) synthase activity
FIV04_00830	COG0438	transferase activity, transferring glycosyl groups
FIV04_00840	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FIV04_00845	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FIV04_00850	COG2089	acid synthase
FIV04_00870	COG1083	cytidylyl-transferase
FIV04_00875	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_00890	COG1519	Transferase
FIV04_00895	COG0859	PFAM glycosyl transferase family 9
FIV04_00900	COG1560	Kdo2-lipid A biosynthetic process
FIV04_00915	COG4942	peptidase
FIV04_00920	COG1045	serine acetyltransferase
FIV04_00935	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIV04_00955	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIV04_00975	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FIV04_00980	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FIV04_00985	COG2089	acid synthase
FIV04_00990	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FIV04_00995	COG1083	cytidylyl-transferase
FIV04_01015	COG0110	maltose O-acetyltransferase activity
FIV04_01045	COG0673	inositol 2-dehydrogenase activity
FIV04_01065	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIV04_01080	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FIV04_01085	COG0534	Mate efflux family protein
FIV04_01095	COG0459	protein refolding
FIV04_01110	COG2199	diguanylate cyclase activity
FIV04_01110	COG2203	Gaf domain
FIV04_01115	COG1285	pathogenesis
FIV04_01120	COG4968	Prepilin-type N-terminal cleavage methylation domain
FIV04_01125	COG1509	lysine 2,3-aminomutase activity
FIV04_01155	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FIV04_01160	COG1053	succinate dehydrogenase
FIV04_01175	COG0490	domain, Protein
FIV04_01175	COG0471	metal ion transport
FIV04_01185	COG1162	GTPase activity
FIV04_01265	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FIV04_01270	COG0802	atpase or kinase
FIV04_01275	COG0860	N-Acetylmuramoyl-L-alanine amidase
FIV04_01280	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FIV04_01295	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FIV04_01300	COG0330	HflC and HflK could
FIV04_01305	COG0330	HflC and HflK could
FIV04_01310	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FIV04_01315	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FIV04_01320	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FIV04_01325	COG0402	S-adenosylhomocysteine deaminase activity
FIV04_01330	COG0557	exoribonuclease II activity
FIV04_01335	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIV04_01360	COG0305	Participates in initiation and elongation during chromosome replication
FIV04_01375	COG0432	Pfam Uncharacterised protein family UPF0047
FIV04_01390	COG0735	belongs to the Fur family
FIV04_01415	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIV04_01515	COG1410	methionine synthase
FIV04_01515	COG0646	methionine synthase
FIV04_01520	COG0527	aspartate kinase activity
FIV04_01525	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIV04_01535	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FIV04_01545	COG2197	response regulator
FIV04_01550	COG0629	single-stranded DNA binding
FIV04_01555	COG2199	diguanylate cyclase activity
FIV04_01555	COG2200	EAL domain
FIV04_01580	COG3267	Type II secretory pathway component ExeA
FIV04_01580	COG3409	Peptidoglycan-binding domain 1 protein
FIV04_01590	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIV04_01595	COG1459	type II secretion system
FIV04_01640	COG1077	Cell shape determining protein MreB Mrl
FIV04_01645	COG1792	Involved in formation and maintenance of cell shape
FIV04_01650	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FIV04_01655	COG0424	maF-like protein
FIV04_01660	COG1530	ribonuclease E activity
FIV04_01670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIV04_01675	COG0312	modulator of DNA gyrase
FIV04_01680	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FIV04_01695	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIV04_01700	COG0589	response to stress
FIV04_01730	COG0142	geranyltranstransferase activity
FIV04_01740	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FIV04_01750	COG2966	Psort location CytoplasmicMembrane, score
FIV04_01755	COG3610	response to peptide
FIV04_01780	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FIV04_01785	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIV04_01790	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FIV04_01795	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FIV04_01820	COG0473	3-isopropylmalate dehydrogenase activity
FIV04_01860	COG1022	Amp-dependent synthetase and ligase
FIV04_01865	COG0028	Belongs to the TPP enzyme family
FIV04_01875	COG3706	GGDEF domain
FIV04_01885	COG1802	Transcriptional regulator
FIV04_01890	COG0469	pyruvate kinase activity
FIV04_01895	COG1349	DNA-binding transcription factor activity
FIV04_01900	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FIV04_01905	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIV04_01910	COG2873	o-acetylhomoserine
FIV04_01920	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIV04_01930	COG1610	YqeY-like protein
FIV04_01935	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FIV04_01945	COG0596	Alpha beta hydrolase
FIV04_01955	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FIV04_01970	COG0617	tRNA 3'-terminal CCA addition
FIV04_01975	COG3409	Peptidoglycan-binding domain 1 protein
FIV04_01975	COG3267	Type II secretory pathway component ExeA
FIV04_01985	COG4991	sh3 domain protein
FIV04_01990	COG0306	phosphate transporter
FIV04_01995	COG1392	Phosphate transport regulator
FIV04_02000	COG3025	triphosphatase activity
FIV04_02005	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIV04_02015	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FIV04_02025	COG1538	Outer membrane efflux protein
FIV04_02030	COG0494	nUDIX hydrolase
FIV04_02035	COG3151	Protein conserved in bacteria
FIV04_02045	COG3150	esterase
FIV04_02050	COG0187	DNA topoisomerase II activity
FIV04_02060	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIV04_02065	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FIV04_02070	COG3105	Protein conserved in bacteria
FIV04_02075	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FIV04_02090	COG0723	plastoquinol--plastocyanin reductase activity
FIV04_02095	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FIV04_02100	COG2857	Cytochrome c1
FIV04_02105	COG0625	glutathione transferase activity
FIV04_02110	COG2969	positive regulation of protein catabolic process
FIV04_02115	COG2823	Periplasmic or secreted lipoprotein
FIV04_02120	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FIV04_02135	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FIV04_02150	COG3116	cell division
FIV04_02155	COG0768	penicillin binding
FIV04_02160	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIV04_02165	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FIV04_02180	COG0772	Belongs to the SEDS family
FIV04_02195	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FIV04_02200	COG0849	cell division
FIV04_02205	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FIV04_02225	COG0494	nUDIX hydrolase
FIV04_02235	COG0505	Belongs to the CarA family
FIV04_02245	COG0730	response to heat
FIV04_02250	COG0583	DNA-binding transcription factor activity
FIV04_02265	COG2860	membrane
FIV04_02270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIV04_02290	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIV04_02295	COG0069	glutamate synthase activity
FIV04_02295	COG0070	glutamate synthase
FIV04_02295	COG0067	glutamate synthase
FIV04_02305	COG0069	glutamate synthase activity
FIV04_02305	COG0067	glutamate synthase
FIV04_02305	COG0070	glutamate synthase
FIV04_02310	COG1242	4 iron, 4 sulfur cluster binding
FIV04_02315	COG2203	Gaf domain
FIV04_02315	COG5001	Diguanylate cyclase
FIV04_02315	COG4251	negative regulation of phosphorylation
FIV04_02315	COG3706	GGDEF domain
FIV04_02320	COG5002	protein histidine kinase activity
FIV04_02320	COG0784	Response regulator, receiver
FIV04_02320	COG2198	Histidine kinase
FIV04_02330	COG0745	RESPONSE REGULATOR receiver
FIV04_02355	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FIV04_02360	COG0431	NADPH-dependent FMN reductase
FIV04_02370	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FIV04_02395	COG1115	amino acid carrier protein
FIV04_02405	COG0513	Belongs to the DEAD box helicase family
FIV04_02420	COG0716	FMN binding
FIV04_02430	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIV04_02435	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FIV04_02440	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FIV04_02445	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FIV04_02485	COG0730	response to heat
FIV04_02500	COG1283	sodium-dependent phosphate transmembrane transporter activity
FIV04_02505	COG0583	DNA-binding transcription factor activity
FIV04_02510	COG0640	Transcriptional regulator
FIV04_02520	COG0728	peptidoglycan biosynthetic process
FIV04_02525	COG0196	riboflavin kinase activity
FIV04_02540	COG1047	Peptidyl-prolyl cis-trans
FIV04_02545	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FIV04_02550	COG3279	Response regulator of the LytR AlgR family
FIV04_02555	COG3275	phosphorelay sensor kinase activity
FIV04_02560	COG1966	Carbon starvation protein
FIV04_02575	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FIV04_02585	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIV04_02590	COG0287	Prephenate dehydrogenase
FIV04_02590	COG1605	Chorismate mutase
FIV04_02595	COG0739	heme binding
FIV04_02605	COG0488	(ABC) transporter
FIV04_02620	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FIV04_02625	COG5001	Diguanylate cyclase
FIV04_02630	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIV04_02635	COG0077	Prephenate dehydratase
FIV04_02635	COG1605	Chorismate mutase
FIV04_02640	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FIV04_02645	COG0741	lytic transglycosylase activity
FIV04_02650	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIV04_02655	COG0564	pseudouridine synthase activity
FIV04_02705	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
FIV04_02715	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FIV04_02730	COG0745	RESPONSE REGULATOR receiver
FIV04_02735	COG5002	protein histidine kinase activity
FIV04_02745	COG0248	Ppx GppA phosphatase
FIV04_02750	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FIV04_02755	COG0573	inorganic phosphate transmembrane transporter activity
FIV04_02760	COG0581	inorganic phosphate transmembrane transporter activity
FIV04_02770	COG0704	Plays a role in the regulation of phosphate uptake
FIV04_02795	COG0450	alkyl hydroperoxide reductase
FIV04_02800	COG0583	DNA-binding transcription factor activity
FIV04_02805	COG0517	IMP dehydrogenase activity
FIV04_02820	COG1862	Preprotein translocase
FIV04_02825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIV04_02830	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIV04_02845	COG0483	inositol monophosphate 1-phosphatase activity
FIV04_02850	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FIV04_02865	COG0822	iron-sulfur transferase activity
FIV04_02890	COG2975	iron-sulfur cluster assembly
FIV04_02910	COG1426	Protein conserved in bacteria
FIV04_02925	COG2976	Protein conserved in bacteria
FIV04_02930	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIV04_02945	COG3706	GGDEF domain
FIV04_02960	COG0559	Belongs to the binding-protein-dependent transport system permease family
FIV04_02985	COG0831	urea catabolic process
FIV04_02990	COG0832	Belongs to the urease beta subunit family
FIV04_02995	COG0804	urea catabolic process
FIV04_03000	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FIV04_03010	COG0830	nickel cation binding
FIV04_03015	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FIV04_03020	COG1570	exodeoxyribonuclease VII activity
FIV04_03025	COG0516	GMP reductase activity
FIV04_03025	COG0517	IMP dehydrogenase activity
FIV04_03040	COG1584	GPR1 FUN34 yaaH family protein
FIV04_03045	COG1115	amino acid carrier protein
FIV04_03050	COG2213	PTS system mannitol-specific
FIV04_03050	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_03055	COG3722	fumarate hydratase activity
FIV04_03060	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FIV04_03065	COG0204	Acyl-transferase
FIV04_03160	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIV04_03170	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FIV04_03175	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FIV04_03185	COG2205	protein histidine kinase activity
FIV04_03200	COG1858	cytochrome C peroxidase
FIV04_03215	COG0189	ligase activity
FIV04_03215	COG4067	protein conserved in archaea
FIV04_03225	COG2867	negative regulation of translational initiation
FIV04_03230	COG2914	Belongs to the UPF0125 (RnfH) family
FIV04_03235	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FIV04_03240	COG0497	DNA recombination
FIV04_03260	COG1301	dicarboxylic acid transport
FIV04_03305	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FIV04_03310	COG1253	flavin adenine dinucleotide binding
FIV04_03315	COG0590	tRNA wobble adenosine to inosine editing
FIV04_03320	COG1764	response to oxidative stress
FIV04_03325	COG1846	Transcriptional regulator
FIV04_03335	COG0047	phosphoribosylformylglycinamidine synthase activity
FIV04_03335	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FIV04_03345	COG2171	N-acyltransferase activity
FIV04_03355	COG2095	MarC family integral membrane protein
FIV04_03370	COG3141	response to X-ray
FIV04_03385	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FIV04_03390	COG1074	ATP-dependent DNA helicase activity
FIV04_03395	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FIV04_03415	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FIV04_03420	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FIV04_03425	COG2166	iron-sulfur cluster assembly
FIV04_03430	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIV04_03435	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FIV04_03445	COG2211	Major facilitator Superfamily
FIV04_03450	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIV04_03465	COG0271	Belongs to the BolA IbaG family
FIV04_03475	COG1805	sodium ion transport
FIV04_03500	COG1477	protein flavinylation
FIV04_03505	COG2991	Protein conserved in bacteria
FIV04_03510	COG0745	RESPONSE REGULATOR receiver
FIV04_03510	COG3706	GGDEF domain
FIV04_03515	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FIV04_03525	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIV04_03535	COG0733	neurotransmitter:sodium symporter activity
FIV04_03540	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FIV04_03555	COG1686	Belongs to the peptidase S11 family
FIV04_03560	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FIV04_03565	COG0772	Belongs to the SEDS family
FIV04_03570	COG0768	penicillin binding
FIV04_03580	COG0799	negative regulation of ribosome biogenesis
FIV04_03585	COG1466	dna polymerase III delta subunit
FIV04_03590	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
FIV04_03595	COG0495	leucyl-tRNA aminoacylation
FIV04_03600	COG2888	peptidyl-tyrosine sulfation
FIV04_03605	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FIV04_03610	COG4535	Mg2 and Co2 transporter CorC
FIV04_03620	COG1702	phosphate starvation-inducible protein PhoH
FIV04_03625	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FIV04_03630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIV04_03635	COG2706	6-phosphogluconolactonase activity
FIV04_03750	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FIV04_03775	COG2890	protein-(glutamine-N5) methyltransferase activity
FIV04_03780	COG3094	Invasion gene expression up-regulator, SirB
FIV04_03785	COG2912	Transglutaminase-like superfamily
FIV04_03800	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FIV04_03805	COG1187	pseudouridine synthase activity
FIV04_03810	COG2840	Smr protein MutS2
FIV04_03850	COG2217	Heavy metal translocating P-type atpase
FIV04_03850	COG2608	mercury ion transmembrane transporter activity
FIV04_03870	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_03880	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FIV04_03905	COG2986	histidine ammonia-lyase
FIV04_03910	COG1216	Glycosyl transferase, family 2
FIV04_03930	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIV04_03935	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FIV04_03995	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FIV04_04000	COG0784	Response regulator, receiver
FIV04_04000	COG0835	chemotaxis
FIV04_04005	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FIV04_04010	COG1815	bacterial-type flagellum-dependent cell motility
FIV04_04015	COG1558	bacterial-type flagellum-dependent cell motility
FIV04_04020	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FIV04_04030	COG4787	bacterial-type flagellum-dependent cell motility
FIV04_04035	COG4786	Flagellar basal body rod
FIV04_04050	COG3951	Flagellar rod assembly protein muramidase FlgJ
FIV04_04050	COG1705	Flagellar rod assembly protein muramidase FlgJ
FIV04_04065	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_04070	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_04075	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_04080	COG1334	flagellar protein FlaG
FIV04_04085	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FIV04_04095	COG1516	flagellar protein fliS
FIV04_04100	COG2204	response regulator
FIV04_04105	COG4191	Histidine kinase
FIV04_04110	COG2204	response regulator
FIV04_04115	COG1677	Flagellar hook-basal body complex protein FliE
FIV04_04125	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FIV04_04180	COG1684	flagellar biosynthetic protein fliR
FIV04_04200	COG0455	bacterial-type flagellum organization
FIV04_04215	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FIV04_04220	COG0643	Histidine kinase
FIV04_04220	COG2198	Histidine kinase
FIV04_04225	COG2201	protein-glutamate methylesterase activity
FIV04_04230	COG1192	Involved in chromosome partitioning
FIV04_04240	COG0835	chemotaxis
FIV04_04250	COG4133	protoheme IX ABC transporter activity
FIV04_04255	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIV04_04260	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIV04_04265	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FIV04_04275	COG1138	Cytochrome C-type biogenesis protein
FIV04_04280	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FIV04_04285	COG3088	subunit of a heme lyase
FIV04_04285	COG4235	cytochrome complex assembly
FIV04_04295	COG2853	Lipoprotein
FIV04_04305	COG2067	long-chain fatty acid transport protein
FIV04_04320	COG0183	Belongs to the thiolase family
FIV04_04330	COG1025	Belongs to the peptidase M16 family
FIV04_04335	COG2062	phosphohistidine phosphatase, SixA
FIV04_04340	COG2840	Smr protein MutS2
FIV04_04345	COG2890	protein-(glutamine-N5) methyltransferase activity
FIV04_04350	COG1280	lysine exporter protein (LysE YggA)
FIV04_04365	COG0745	RESPONSE REGULATOR receiver
FIV04_04375	COG1653	transport
FIV04_04390	COG3842	ATPase activity
FIV04_04395	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIV04_04400	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FIV04_04405	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIV04_04415	COG2204	response regulator
FIV04_04440	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FIV04_04445	COG0776	regulation of translation
FIV04_04450	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIV04_04455	COG1555	photosystem II stabilization
FIV04_04480	COG0436	Aminotransferase
FIV04_04485	COG1169	isochorismate synthase
FIV04_04505	COG1441	menaquinone biosynthetic process
FIV04_04515	COG2190	(PTS) system
FIV04_04515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_04515	COG1263	PTS System
FIV04_04530	COG2855	membrane
FIV04_04535	COG0477	Major facilitator Superfamily
FIV04_04590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_04595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_04600	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FIV04_04610	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIV04_04615	COG1522	sequence-specific DNA binding
FIV04_04625	COG1946	Acyl-CoA thioesterase
FIV04_04630	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FIV04_04655	COG2188	Transcriptional regulator
FIV04_04660	COG1263	PTS System
FIV04_04660	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_04665	COG1621	beta-fructofuranosidase activity
FIV04_04675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_04695	COG5001	Diguanylate cyclase
FIV04_04695	COG4251	negative regulation of phosphorylation
FIV04_04695	COG3706	GGDEF domain
FIV04_04695	COG2203	Gaf domain
FIV04_04720	COG2824	Alkylphosphonate utilization operon protein PhnA
FIV04_04735	COG0784	Response regulator, receiver
FIV04_04735	COG5002	protein histidine kinase activity
FIV04_04740	COG0745	RESPONSE REGULATOR receiver
FIV04_04800	COG3119	arylsulfatase activity
FIV04_04805	COG1609	Transcriptional regulator
FIV04_04820	COG2814	Major facilitator Superfamily
FIV04_04835	COG1760	l-serine dehydratase
FIV04_04840	COG1522	sequence-specific DNA binding
FIV04_04850	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FIV04_04860	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FIV04_04870	COG1228	amidohydrolase
FIV04_04875	COG3040	lipid binding
FIV04_04905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_04925	COG0583	DNA-binding transcription factor activity
FIV04_04930	COG0346	lactoylglutathione lyase activity
FIV04_04935	COG1902	pentaerythritol trinitrate reductase activity
FIV04_04960	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIV04_04985	COG0517	IMP dehydrogenase activity
FIV04_04995	COG2217	Heavy metal translocating P-type atpase
FIV04_05020	COG0537	adenosine 5'-monophosphoramidase activity
FIV04_05050	COG1252	NADH dehydrogenase
FIV04_05055	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_05060	COG0616	signal peptide processing
FIV04_05065	COG2719	SpoVR family
FIV04_05070	COG2718	Belongs to the UPF0229 family
FIV04_05075	COG2766	serine protein kinase
FIV04_05090	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FIV04_05100	COG1882	Formate acetyltransferase
FIV04_05125	COG4215	(ABC) transporter
FIV04_05145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_05155	COG0708	Exodeoxyribonuclease III
FIV04_05160	COG1770	oligopeptidase
FIV04_05165	COG2814	Major facilitator Superfamily
FIV04_05170	COG0840	transmembrane signaling receptor activity
FIV04_05175	COG2850	peptidyl-arginine hydroxylation
FIV04_05190	COG0730	response to heat
FIV04_05195	COG1199	ATP-dependent helicase activity
FIV04_05205	COG1187	pseudouridine synthase activity
FIV04_05215	COG1278	Cold shock
FIV04_05225	COG0542	response to heat
FIV04_05230	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FIV04_05235	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FIV04_05260	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIV04_05265	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FIV04_05295	COG3070	regulator of competence-specific genes
FIV04_05310	COG0745	RESPONSE REGULATOR receiver
FIV04_05315	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FIV04_05320	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIV04_05330	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FIV04_05335	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FIV04_05340	COG3383	formate dehydrogenase (NAD+) activity
FIV04_05355	COG4067	protein conserved in archaea
FIV04_05355	COG0189	ligase activity
FIV04_05375	COG1801	Protein of unknown function DUF72
FIV04_05385	COG2203	Gaf domain
FIV04_05385	COG2199	diguanylate cyclase activity
FIV04_05390	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FIV04_05395	COG0840	transmembrane signaling receptor activity
FIV04_05410	COG1271	oxidase subunit
FIV04_05415	COG1294	oxidase, subunit
FIV04_05420	COG4890	Cyd operon protein YbgT
FIV04_05430	COG0824	Thioesterase
FIV04_05435	COG0811	peptide transport
FIV04_05455	COG2885	chlorophyll binding
FIV04_05460	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FIV04_05465	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FIV04_05480	COG0784	Response regulator, receiver
FIV04_05480	COG5002	protein histidine kinase activity
FIV04_05510	COG0395	ABC-type sugar transport system, permease component
FIV04_05515	COG1554	hydrolase, family 65, central catalytic
FIV04_05520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_05525	COG3842	ATPase activity
FIV04_05535	COG1621	beta-fructofuranosidase activity
FIV04_05555	COG0583	DNA-binding transcription factor activity
FIV04_05560	COG1349	DNA-binding transcription factor activity
FIV04_05565	COG0584	glycerophosphoryl diester phosphodiesterase
FIV04_05580	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIV04_05625	COG3710	Transcriptional regulator
FIV04_05630	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_05665	COG0745	RESPONSE REGULATOR receiver
FIV04_05670	COG0463	Glycosyl transferase, family 2
FIV04_05685	COG1032	radical SAM domain protein
FIV04_05700	COG0583	DNA-binding transcription factor activity
FIV04_05705	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FIV04_05715	COG2350	Protein conserved in bacteria
FIV04_05720	COG1607	acyl-coa hydrolase
FIV04_05745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIV04_05750	COG0840	transmembrane signaling receptor activity
FIV04_05770	COG1301	dicarboxylic acid transport
FIV04_05780	COG0330	HflC and HflK could
FIV04_05785	COG0159	tryptophan synthase activity
FIV04_05795	COG0134	indole-3-glycerol-phosphate synthase activity
FIV04_05795	COG0135	phosphoribosylanthranilate isomerase activity
FIV04_05800	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FIV04_05805	COG0512	Glutamine amidotransferase of anthranilate synthase
FIV04_05810	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIV04_05820	COG0613	PHP domain protein
FIV04_05825	COG0009	L-threonylcarbamoyladenylate synthase
FIV04_05830	COG1187	pseudouridine synthase activity
FIV04_05840	COG3099	Belongs to the UPF0263 family
FIV04_05855	COG0417	DNA replication proofreading
FIV04_05860	COG2197	response regulator
FIV04_05865	COG0322	excinuclease ABC activity
FIV04_05905	COG0019	diaminopimelate decarboxylase activity
FIV04_05940	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIV04_05945	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIV04_05965	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FIV04_05970	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FIV04_05980	COG0437	4 iron, 4 sulfur cluster binding
FIV04_05985	COG3301	Polysulphide reductase, NrfD
FIV04_05990	COG1138	Cytochrome C-type biogenesis protein
FIV04_06000	COG3088	subunit of a heme lyase
FIV04_06000	COG4235	cytochrome complex assembly
FIV04_06010	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIV04_06035	COG2989	Protein conserved in bacteria
FIV04_06040	COG3108	Peptidase M15
FIV04_06045	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FIV04_06060	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIV04_06085	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIV04_06095	COG0840	transmembrane signaling receptor activity
FIV04_06105	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FIV04_06115	COG2166	iron-sulfur cluster assembly
FIV04_06120	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIV04_06125	COG0719	Fe-S assembly protein
FIV04_06130	COG0396	ATPase activity
FIV04_06135	COG0719	Fe-S assembly protein
FIV04_06140	COG0316	Belongs to the HesB IscA family
FIV04_06150	COG1780	Probably involved in ribonucleotide reductase function
FIV04_06155	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FIV04_06170	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FIV04_06175	COG4988	ABC transporter
FIV04_06180	COG0492	ferredoxin-NADP+ reductase activity
FIV04_06195	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FIV04_06225	COG0745	RESPONSE REGULATOR receiver
FIV04_06225	COG3706	GGDEF domain
FIV04_06230	COG0471	metal ion transport
FIV04_06235	COG2949	membrane
FIV04_06240	COG0281	malic enzyme
FIV04_06245	COG1643	Atp-dependent helicase
FIV04_06290	COG0277	FAD linked oxidase domain protein
FIV04_06290	COG0247	lactate metabolic process
FIV04_06305	COG2986	histidine ammonia-lyase
FIV04_06315	COG0010	Belongs to the arginase family
FIV04_06320	COG1228	amidohydrolase
FIV04_06325	COG2188	Transcriptional regulator
FIV04_06330	COG4326	sporulation control protein
FIV04_06340	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FIV04_06375	COG1794	racemase activity, acting on amino acids and derivatives
FIV04_06380	COG1309	transcriptional regulator
FIV04_06410	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FIV04_06420	COG0534	Mate efflux family protein
FIV04_06425	COG0444	Belongs to the ABC transporter superfamily
FIV04_06430	COG4608	Belongs to the ABC transporter superfamily
FIV04_06450	COG3713	MltA-interacting MipA family protein
FIV04_06455	COG5001	Diguanylate cyclase
FIV04_06460	COG0745	RESPONSE REGULATOR receiver
FIV04_06465	COG2205	protein histidine kinase activity
FIV04_06480	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FIV04_06485	COG1280	lysine exporter protein (LysE YggA)
FIV04_06490	COG1115	amino acid carrier protein
FIV04_06505	COG1115	amino acid carrier protein
FIV04_06520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_06535	COG3290	protein histidine kinase activity
FIV04_06540	COG4565	transcriptional regulatory protein
FIV04_06545	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FIV04_06550	COG0363	glucosamine-6-phosphate deaminase activity
FIV04_06555	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FIV04_06565	COG4628	conserved protein (DUF2132)
FIV04_06595	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIV04_06600	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIV04_06610	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FIV04_06615	COG0372	Belongs to the citrate synthase family
FIV04_06620	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FIV04_06625	COG2828	Protein conserved in bacteria
FIV04_06645	COG0561	phosphatase activity
FIV04_06650	COG0602	queuosine metabolic process
FIV04_06670	COG3047	cAMP biosynthetic process
FIV04_06670	COG2885	chlorophyll binding
FIV04_06695	COG1254	Belongs to the acylphosphatase family
FIV04_06700	COG2920	part of a sulfur-relay system
FIV04_06705	COG0670	Belongs to the BI1 family
FIV04_06710	COG1126	abc transporter atp-binding protein
FIV04_06715	COG0765	amino acid transport
FIV04_06720	COG4597	amino acid ABC transporter
FIV04_06725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIV04_06740	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIV04_06755	COG2996	Protein conserved in bacteria
FIV04_06765	COG3008	intermembrane lipid transfer
FIV04_06770	COG2995	paraquat-inducible protein a
FIV04_06775	COG1132	(ABC) transporter
FIV04_06780	COG1956	GAF domain-containing protein
FIV04_06800	COG0308	aminopeptidase N
FIV04_06810	COG2902	Dehydrogenase
FIV04_06855	COG1067	ATP-dependent peptidase activity
FIV04_07205	COG2205	protein histidine kinase activity
FIV04_07205	COG0784	Response regulator, receiver
FIV04_07220	COG3278	Belongs to the heme-copper respiratory oxidase family
FIV04_07235	COG2010	Cytochrome c
FIV04_07245	COG2217	Heavy metal translocating P-type atpase
FIV04_07260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIV04_07265	COG0589	response to stress
FIV04_07270	COG0037	tRNA processing
FIV04_07295	COG1176	ABC-type spermidine putrescine transport system, permease component I
FIV04_07300	COG1177	transmembrane transport
FIV04_07305	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIV04_07310	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FIV04_07315	COG5002	protein histidine kinase activity
FIV04_07315	COG5001	Diguanylate cyclase
FIV04_07325	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FIV04_07330	COG0004	ammonium transporteR
FIV04_07345	COG0437	4 iron, 4 sulfur cluster binding
FIV04_07350	COG3383	formate dehydrogenase (NAD+) activity
FIV04_07350	COG0243	molybdopterin cofactor binding
FIV04_07380	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FIV04_07385	COG0840	transmembrane signaling receptor activity
FIV04_07390	COG0488	(ABC) transporter
FIV04_07420	COG4191	Histidine kinase
FIV04_07425	COG2204	response regulator
FIV04_07435	COG4662	Binding-protein-dependent transport system inner membrane component
FIV04_07440	COG3842	ATPase activity
FIV04_07480	COG0791	NLP P60 protein
FIV04_07500	COG0307	riboflavin synthase, alpha
FIV04_07545	COG4175	Glycine betaine
FIV04_07545	COG3448	diguanylate cyclase activity
FIV04_07555	COG2204	response regulator
FIV04_07560	COG0438	transferase activity, transferring glycosyl groups
FIV04_07565	COG0297	glycogen (starch) synthase activity
FIV04_07590	COG0438	transferase activity, transferring glycosyl groups
FIV04_07605	COG1215	transferase activity, transferring glycosyl groups
FIV04_07610	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FIV04_07615	COG0583	DNA-binding transcription factor activity
FIV04_07620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_07645	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_07650	COG0110	maltose O-acetyltransferase activity
FIV04_07675	COG4160	amino acid transport
FIV04_07680	COG4215	(ABC) transporter
FIV04_07685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIV04_07690	COG1126	abc transporter atp-binding protein
FIV04_07695	COG1132	(ABC) transporter
FIV04_07730	COG1609	Transcriptional regulator
FIV04_07735	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIV04_07750	COG3842	ATPase activity
FIV04_07760	COG1175	transmembrane transport
FIV04_07765	COG0395	ABC-type sugar transport system, permease component
FIV04_07785	COG0826	peptidase U32
FIV04_07825	COG0589	response to stress
FIV04_07830	COG0415	Belongs to the DNA photolyase family
FIV04_07835	COG3046	protein related to deoxyribodipyrimidine photolyase
FIV04_07845	COG0419	ATPase involved in DNA repair
FIV04_07850	COG0420	3'-5' exonuclease activity
FIV04_07875	COG1917	Cupin 2, conserved barrel domain protein
FIV04_07880	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_07885	COG0517	IMP dehydrogenase activity
FIV04_07890	COG2176	DNA-directed DNA polymerase activity
FIV04_07895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIV04_07915	COG0454	-acetyltransferase
FIV04_07920	COG4771	TonB-dependent receptor
FIV04_07925	COG0583	DNA-binding transcription factor activity
FIV04_07935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_07940	COG2197	response regulator
FIV04_07960	COG3469	chitinase activity
FIV04_07965	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FIV04_07970	COG0589	response to stress
FIV04_07975	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIV04_07980	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FIV04_07985	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIV04_07990	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_08000	COG0579	oxidoreductase
FIV04_08045	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIV04_08070	COG3063	Type IV pilus biogenesis stability protein PilW
FIV04_08080	COG1451	nucleotide metabolic process
FIV04_08095	COG2814	Major facilitator Superfamily
FIV04_08105	COG3706	GGDEF domain
FIV04_08105	COG0745	RESPONSE REGULATOR receiver
FIV04_08115	COG1247	-acetyltransferase
FIV04_08125	COG4139	cobalamin transport
FIV04_08130	COG2988	succinylglutamate desuccinylase activity
FIV04_08150	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FIV04_08160	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FIV04_08165	COG0702	epimerase
FIV04_08175	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FIV04_08180	COG4989	oxidoreductase activity
FIV04_08195	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIV04_08200	COG3122	Protein conserved in bacteria
FIV04_08205	COG2207	Transcriptional regulator
FIV04_08225	COG2925	Exonuclease
FIV04_08235	COG1346	cytolysis
FIV04_08245	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FIV04_08295	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIV04_08300	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIV04_08305	COG1121	(ABC) transporter
FIV04_08350	COG1741	Belongs to the pirin family
FIV04_08365	COG0583	DNA-binding transcription factor activity
FIV04_08370	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FIV04_08380	COG1280	lysine exporter protein (LysE YggA)
FIV04_08390	COG2873	o-acetylhomoserine
FIV04_08395	COG1522	sequence-specific DNA binding
FIV04_08470	COG0596	Alpha beta hydrolase
FIV04_08480	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIV04_08530	COG0072	phenylalanine-tRNA ligase activity
FIV04_08530	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIV04_08540	COG0745	RESPONSE REGULATOR receiver
FIV04_08540	COG3706	GGDEF domain
FIV04_08580	COG1643	Atp-dependent helicase
FIV04_08585	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIV04_08600	COG0395	ABC-type sugar transport system, permease component
FIV04_08605	COG1175	transmembrane transport
FIV04_08610	COG1653	transport
FIV04_08620	COG3459	Glycosyltransferase 36 associated
FIV04_08625	COG3842	ATPase activity
FIV04_08665	COG3710	Transcriptional regulator
FIV04_08695	COG3706	GGDEF domain
FIV04_08710	COG0443	Heat shock 70 kDa protein
FIV04_08725	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIV04_08730	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FIV04_08735	COG3768	UPF0283 membrane protein
FIV04_08740	COG3106	COG3106 Predicted ATPase
FIV04_08755	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FIV04_08760	COG2205	protein histidine kinase activity
FIV04_08760	COG0784	Response regulator, receiver
FIV04_08770	COG0494	nUDIX hydrolase
FIV04_08775	COG0814	amino acid
FIV04_08780	COG1760	l-serine dehydratase
FIV04_08785	COG0814	amino acid
FIV04_08790	COG0840	transmembrane signaling receptor activity
FIV04_08795	COG0017	Asparaginyl-tRNA synthetase
FIV04_08815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIV04_08825	COG3437	response regulator, receiver
FIV04_08825	COG2770	Histidine kinase
FIV04_08830	COG1448	Aminotransferase
FIV04_08850	COG2199	diguanylate cyclase activity
FIV04_08860	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FIV04_08870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FIV04_08870	COG4191	Histidine kinase
FIV04_08885	COG3070	regulator of competence-specific genes
FIV04_08895	COG2431	L-lysine efflux transmembrane transporter activity
FIV04_08905	COG0076	glutamate decarboxylase activity
FIV04_08910	COG1737	Transcriptional regulator
FIV04_08920	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIV04_08930	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FIV04_08935	COG1960	acyl-CoA dehydrogenase activity
FIV04_08975	COG4181	ATPase activity
FIV04_08980	COG0534	Mate efflux family protein
FIV04_08985	COG1858	cytochrome C peroxidase
FIV04_08990	COG0702	epimerase
FIV04_09000	COG2814	Major facilitator Superfamily
FIV04_09010	COG1061	Type III restriction enzyme res subunit
FIV04_09025	COG2205	protein histidine kinase activity
FIV04_09035	COG0612	Peptidase, M16
FIV04_09040	COG4178	(ABC) transporter
FIV04_09045	COG4771	TonB-dependent receptor
FIV04_09055	COG0811	peptide transport
FIV04_09060	COG0811	peptide transport
FIV04_09065	COG0848	biopolymer transport protein
FIV04_09085	COG1216	Glycosyl transferase, family 2
FIV04_09085	COG0463	Glycosyl transferase, family 2
FIV04_09175	COG0523	cobalamin synthesis protein
FIV04_09185	COG0384	phenazine biosynthesis protein PhzF
FIV04_09200	COG1511	domain protein
FIV04_09200	COG3264	Mechanosensitive ion channel
FIV04_09210	COG0583	DNA-binding transcription factor activity
FIV04_09225	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIV04_09225	COG3008	intermembrane lipid transfer
FIV04_09230	COG2995	paraquat-inducible protein a
FIV04_09260	COG4774	siderophore transport
FIV04_09270	COG0243	molybdopterin cofactor binding
FIV04_09275	COG3005	denitrification pathway
FIV04_09285	COG2866	Carboxypeptidase
FIV04_09295	COG0513	Belongs to the DEAD box helicase family
FIV04_09315	COG4134	Bacterial extracellular solute-binding protein
FIV04_09320	COG4135	transport system, permease component
FIV04_09325	COG4136	ATPase activity
FIV04_09330	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FIV04_09335	COG0116	Belongs to the methyltransferase superfamily
FIV04_09335	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FIV04_09340	COG0564	pseudouridine synthase activity
FIV04_09350	COG0733	neurotransmitter:sodium symporter activity
FIV04_09360	COG0626	cystathionine gamma-synthase activity
FIV04_09375	COG2818	Glycosylase
FIV04_09390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_09395	COG1983	PspC domain protein
FIV04_09405	COG1842	Phage shock protein A
FIV04_09410	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FIV04_09420	COG4168	peptide transport system, permease
FIV04_09425	COG4171	peptide transport system, permease
FIV04_09435	COG4172	Belongs to the ABC transporter superfamily
FIV04_09450	COG1227	inorganic diphosphatase activity
FIV04_09460	COG0243	molybdopterin cofactor binding
FIV04_09465	COG3005	denitrification pathway
FIV04_09470	COG4459	periplasmic nitrate reductase
FIV04_09475	COG0390	transport system, permease component
FIV04_09480	COG2116	formate transmembrane transporter activity
FIV04_09515	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FIV04_09525	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FIV04_09530	COG3012	SEC-C Motif Domain Protein
FIV04_09535	COG0140	phosphoribosyl-ATP diphosphatase activity
FIV04_09535	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FIV04_09545	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FIV04_09550	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FIV04_09555	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FIV04_09555	COG0131	Imidazoleglycerol-phosphate dehydratase
FIV04_09575	COG1757	Na H antiporter
FIV04_09580	COG2916	Histone family protein nucleoid-structuring protein H-NS
FIV04_09585	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_09605	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FIV04_09625	COG2226	methyltransferase
FIV04_09640	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FIV04_09645	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FIV04_09655	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FIV04_09660	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FIV04_09665	COG1674	ftsk spoiiie
FIV04_09670	COG1522	sequence-specific DNA binding
FIV04_09675	COG0686	Belongs to the AlaDH PNT family
FIV04_09685	COG0583	DNA-binding transcription factor activity
FIV04_09710	COG4608	Belongs to the ABC transporter superfamily
FIV04_09715	COG0444	Belongs to the ABC transporter superfamily
FIV04_09720	COG4166	transmembrane transport
FIV04_09725	COG4239	(ABC) transporter, permease
FIV04_09730	COG0601	transmembrane transport
FIV04_09740	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FIV04_09745	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FIV04_09755	COG0539	negative regulation of cytoplasmic translation
FIV04_09765	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FIV04_09780	COG1132	(ABC) transporter
FIV04_09785	COG0658	competence protein
FIV04_09785	COG2333	competence protein COMEC
FIV04_09795	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIV04_09800	COG1136	(ABC) transporter
FIV04_09805	COG4591	ABC-type transport system involved in lipoprotein release permease component
FIV04_09815	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FIV04_09825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIV04_09840	COG0587	DNA-directed DNA polymerase activity
FIV04_09845	COG0784	Response regulator, receiver
FIV04_09845	COG0835	chemotaxis
FIV04_09850	COG1940	carbohydrate kinase activity
FIV04_09855	COG0469	pyruvate kinase activity
FIV04_09860	COG4667	esterase of the alpha-beta hydrolase superfamily
FIV04_09880	COG1263	PTS System
FIV04_09880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_09885	COG0084	hydrolase, TatD family'
FIV04_09890	COG0470	DNA polymerase III
FIV04_09895	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FIV04_09900	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FIV04_09905	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIV04_09930	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FIV04_09945	COG1399	metal-binding, possibly nucleic acid-binding protein
FIV04_09955	COG0564	pseudouridine synthase activity
FIV04_09960	COG1530	ribonuclease E activity
FIV04_09965	COG0659	secondary active sulfate transmembrane transporter activity
FIV04_09975	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FIV04_09980	COG2982	Protein involved in outer membrane biogenesis
FIV04_09990	COG0489	protein tyrosine kinase activity
FIV04_10005	COG2186	Transcriptional regulator
FIV04_10020	COG0653	protein targeting
FIV04_10025	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIV04_10030	COG3706	GGDEF domain
FIV04_10035	COG0366	Alpha amylase catalytic
FIV04_10050	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIV04_10055	COG0280	phosphate acetyltransferase
FIV04_10055	COG0857	belongs to the CobB CobQ family
FIV04_10060	COG0435	Glutathione S-transferase
FIV04_10070	COG0444	Belongs to the ABC transporter superfamily
FIV04_10075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIV04_10080	COG0601	transmembrane transport
FIV04_10090	COG0314	molybdopterin synthase activity
FIV04_10095	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FIV04_10105	COG0521	Mo-molybdopterin cofactor biosynthetic process
FIV04_10115	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FIV04_10120	COG2198	Histidine kinase
FIV04_10125	COG2204	response regulator
FIV04_10145	COG4657	Part of a membrane complex involved in electron transport
FIV04_10155	COG4656	Part of a membrane complex involved in electron transport
FIV04_10175	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FIV04_10180	COG0346	lactoylglutathione lyase activity
FIV04_10200	COG2056	Na+-H+ antiporter family
FIV04_10210	COG5002	protein histidine kinase activity
FIV04_10210	COG2205	protein histidine kinase activity
FIV04_10210	COG0784	Response regulator, receiver
FIV04_10220	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FIV04_10240	COG1454	alcohol dehydrogenase
FIV04_10240	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_10245	COG2095	MarC family integral membrane protein
FIV04_10250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIV04_10255	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FIV04_10260	COG1757	Na H antiporter
FIV04_10280	COG3083	sulfuric ester hydrolase activity
FIV04_10295	COG0123	including yeast histone deacetylase and acetoin utilization protein
FIV04_10310	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIV04_10315	COG0778	Nitroreductase
FIV04_10320	COG1902	pentaerythritol trinitrate reductase activity
FIV04_10320	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIV04_10325	COG0616	signal peptide processing
FIV04_10330	COG0252	asparaginase activity
FIV04_10335	COG3139	Protein of unknown function (DUF1315)
FIV04_10345	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIV04_10350	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIV04_10365	COG2226	methyltransferase
FIV04_10400	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FIV04_10405	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FIV04_10425	COG0745	RESPONSE REGULATOR receiver
FIV04_10430	COG0583	DNA-binding transcription factor activity
FIV04_10435	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FIV04_10440	COG1286	toxin biosynthetic process
FIV04_10445	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FIV04_10450	COG0285	dihydrofolate synthase activity
FIV04_10470	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FIV04_10480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FIV04_10490	COG0431	NADPH-dependent FMN reductase
FIV04_10500	COG3101	peptidyl-lysine hydroxylation
FIV04_10505	COG2860	membrane
FIV04_10510	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FIV04_10525	COG2815	serine threonine protein kinase
FIV04_10525	COG0515	serine threonine protein kinase
FIV04_10540	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIV04_10550	COG2951	lytic endotransglycosylase activity
FIV04_10565	COG2894	cell division
FIV04_10570	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FIV04_10580	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FIV04_10585	COG0318	PFAM AMP-dependent synthetase and ligase
FIV04_10595	COG3065	identical protein binding
FIV04_10605	COG1214	PFAM Peptidase M22, glycoprotease
FIV04_10610	COG1199	ATP-dependent helicase activity
FIV04_10615	COG0788	formyltetrahydrofolate deformylase activity
FIV04_10620	COG3102	Protein conserved in bacteria
FIV04_10645	COG1918	ferrous iron import across plasma membrane
FIV04_10655	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FIV04_10660	COG1121	(ABC) transporter
FIV04_10665	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIV04_10680	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIV04_10685	COG0567	Dehydrogenase, E1 component
FIV04_10690	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FIV04_10695	COG1053	succinate dehydrogenase
FIV04_10700	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FIV04_10705	COG2009	succinate dehydrogenase
FIV04_10715	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FIV04_10725	COG0033	Phosphoglucomutase
FIV04_10735	COG0596	Alpha beta hydrolase
FIV04_10745	COG0716	FMN binding
FIV04_10770	COG2190	(PTS) system
FIV04_10770	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_10770	COG1263	PTS System
FIV04_10775	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FIV04_10780	COG1846	Transcriptional regulator
FIV04_10780	COG1940	carbohydrate kinase activity
FIV04_10785	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FIV04_10785	COG4651	solute:proton antiporter activity
FIV04_10790	COG0367	asparagine synthase
FIV04_10795	COG0250	Participates in transcription elongation, termination and antitermination
FIV04_10800	COG3104	oligopeptide transport
FIV04_10820	COG3710	Transcriptional regulator
FIV04_10835	COG0622	Phosphoesterase
FIV04_10860	COG1090	epimerase
FIV04_10865	COG0300	oxidoreductase activity
FIV04_10870	COG3118	belongs to the thioredoxin family
FIV04_10875	COG0330	HflC and HflK could
FIV04_10885	COG0789	Transcriptional regulator
FIV04_10910	COG3115	cell septum assembly
FIV04_10920	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FIV04_10925	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_10930	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FIV04_10935	COG2190	(PTS) system
FIV04_10940	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_10945	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_10950	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FIV04_10955	COG2837	iron assimilation
FIV04_10975	COG1393	Belongs to the ArsC family
FIV04_10985	COG1876	peptidase activity
FIV04_11000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FIV04_11005	COG2716	regulation of RNA biosynthetic process
FIV04_11010	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FIV04_11025	COG4783	chaperone-mediated protein folding
FIV04_11030	COG1393	Belongs to the ArsC family
FIV04_11050	COG2233	PERMEase
FIV04_11065	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FIV04_11070	COG0121	glutamine amidotransferase
FIV04_11075	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FIV04_11080	COG1960	acyl-CoA dehydrogenase activity
FIV04_11090	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FIV04_11100	COG2226	methyltransferase
FIV04_11110	COG0741	lytic transglycosylase activity
FIV04_11110	COG1388	LysM domain
FIV04_11125	COG0347	Belongs to the P(II) protein family
FIV04_11145	COG0587	DNA-directed DNA polymerase activity
FIV04_11175	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FIV04_11185	COG0750	zinc metalloprotease
FIV04_11195	COG0575	Belongs to the CDS family
FIV04_11200	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FIV04_11205	COG0233	cytoplasmic translational termination
FIV04_11210	COG0528	UMP kinase activity
FIV04_11215	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FIV04_11230	COG0024	Methionine aminopeptidase
FIV04_11245	COG0564	pseudouridine synthase activity
FIV04_11250	COG3098	single-species biofilm formation
FIV04_11290	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FIV04_11300	COG1720	tRNA m6t6A37 methyltransferase activity
FIV04_11330	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FIV04_11335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FIV04_11350	COG0366	Alpha amylase catalytic
FIV04_11355	COG1263	PTS System
FIV04_11355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_11360	COG1609	Transcriptional regulator
FIV04_11370	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FIV04_11375	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FIV04_11380	COG2011	ABC-type metal ion transport system permease component
FIV04_11385	COG1464	Belongs to the NlpA lipoprotein family
FIV04_11390	COG4580	involved in the transport of maltose and maltodextrins
FIV04_11395	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FIV04_11415	COG3706	GGDEF domain
FIV04_11420	COG1611	Belongs to the LOG family
FIV04_11440	COG2363	Small membrane protein
FIV04_11450	COG0583	DNA-binding transcription factor activity
FIV04_11460	COG0625	glutathione transferase activity
FIV04_11475	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FIV04_11485	COG0142	geranyltranstransferase activity
FIV04_11500	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FIV04_11505	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FIV04_11530	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIV04_11530	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FIV04_11565	COG2252	PERMEase
FIV04_11575	COG2195	Cleaves the N-terminal amino acid of tripeptides
FIV04_11595	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIV04_11610	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FIV04_11620	COG2017	converts alpha-aldose to the beta-anomer
FIV04_11630	COG1085	galactose-1-phosphate uridylyltransferase
FIV04_11635	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIV04_11640	COG1609	Transcriptional regulator
FIV04_11645	COG3250	beta-galactosidase activity
FIV04_11650	COG2731	YhcH YjgK YiaL family protein
FIV04_11655	COG0531	amino acid
FIV04_11660	COG0531	amino acid
FIV04_11670	COG3408	Glycogen debranching enzyme
FIV04_11670	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FIV04_11675	COG3250	beta-galactosidase activity
FIV04_11685	COG0395	ABC-type sugar transport system, permease component
FIV04_11700	COG0534	Mate efflux family protein
FIV04_11705	COG0583	DNA-binding transcription factor activity
FIV04_11710	COG2059	Chromate
FIV04_11765	COG4964	Belongs to the GSP D family
FIV04_11785	COG1917	Cupin 2, conserved barrel domain protein
FIV04_11785	COG4977	sequence-specific DNA binding
FIV04_11790	COG1022	Amp-dependent synthetase and ligase
FIV04_11800	COG0583	DNA-binding transcription factor activity
FIV04_11805	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FIV04_11810	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FIV04_11820	COG0560	Phosphoserine phosphatase
FIV04_11830	COG0813	purine-nucleoside phosphorylase activity
FIV04_11840	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FIV04_11850	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIV04_11855	COG0084	hydrolase, TatD family'
FIV04_11875	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIV04_11890	COG3153	acetyltransferase
FIV04_11915	COG0534	Mate efflux family protein
FIV04_11935	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FIV04_11945	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FIV04_11955	COG0195	Participates in both transcription termination and antitermination
FIV04_11975	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FIV04_11985	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FIV04_11990	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FIV04_12000	COG1534	Rna-binding protein
FIV04_12005	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FIV04_12015	COG2027	D-alanyl-D-alanine carboxypeptidase
FIV04_12020	COG2239	Acts as a magnesium transporter
FIV04_12025	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FIV04_12030	COG0739	heme binding
FIV04_12060	COG0628	permease
FIV04_12065	COG2813	Specifically methylates the guanine in position
FIV04_12075	COG0747	negative chemotaxis
FIV04_12085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FIV04_12090	COG0444	Belongs to the ABC transporter superfamily
FIV04_12095	COG4608	Belongs to the ABC transporter superfamily
FIV04_12105	COG2971	BadF BadG BcrA BcrD
FIV04_12120	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIV04_12125	COG3842	ATPase activity
FIV04_12135	COG1840	ABC-type Fe3 transport system, periplasmic component
FIV04_12140	COG0004	ammonium transporteR
FIV04_12155	COG1049	propionate catabolic process, 2-methylcitrate cycle
FIV04_12160	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIV04_12165	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FIV04_12170	COG1643	Atp-dependent helicase
FIV04_12180	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FIV04_12195	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIV04_12210	COG0842	Transport permease protein
FIV04_12215	COG1131	(ABC) transporter
FIV04_12220	COG0659	secondary active sulfate transmembrane transporter activity
FIV04_12225	COG0288	reversible hydration of carbon dioxide
FIV04_12240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIV04_12245	COG0508	dehydrogenase complex catalyzes the overall conversion of
FIV04_12250	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FIV04_12255	COG2186	Transcriptional regulator
FIV04_12265	COG0157	Belongs to the NadC ModD family
FIV04_12275	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIV04_12280	COG1459	type II secretion system
FIV04_12290	COG0237	dephospho-CoA kinase activity
FIV04_12300	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FIV04_12315	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FIV04_12325	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FIV04_12330	COG4137	Cytochrome C assembly protein
FIV04_12335	COG4536	flavin adenine dinucleotide binding
FIV04_12340	COG1854	S-ribosylhomocysteine lyase activity
FIV04_12355	COG0612	Peptidase, M16
FIV04_12360	COG1238	metal cluster binding
FIV04_12365	COG2130	NADP-dependent
FIV04_12370	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FIV04_12375	COG0511	ligase activity, forming carbon-carbon bonds
FIV04_12375	COG5016	pyruvate
FIV04_12455	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FIV04_12465	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FIV04_12470	COG1546	Belongs to the CinA family
FIV04_12480	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIV04_12495	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FIV04_12500	COG0585	pseudouridine synthase activity
FIV04_12520	COG0148	phosphopyruvate hydratase activity
FIV04_12530	COG3956	TIGRFAM MazG family protein
FIV04_12535	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FIV04_12545	COG3850	Histidine kinase
FIV04_12545	COG2205	protein histidine kinase activity
FIV04_12545	COG3437	response regulator, receiver
FIV04_12545	COG4999	Histidine kinase
FIV04_12555	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FIV04_12565	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FIV04_12575	COG0681	Belongs to the peptidase S26 family
FIV04_12580	COG0481	GTPase activity
FIV04_12600	COG1595	DNA-templated transcription, initiation
FIV04_12605	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FIV04_12615	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FIV04_12625	COG0442	prolyl-tRNA aminoacylation
FIV04_12635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIV04_12640	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FIV04_12650	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FIV04_12660	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FIV04_12670	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FIV04_12690	COG0668	transmembrane transport
FIV04_12695	COG0191	fructose-bisphosphate aldolase activity
FIV04_12705	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIV04_12720	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FIV04_12735	COG2356	endonuclease I
FIV04_12745	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FIV04_12750	COG0189	ligase activity
FIV04_12780	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FIV04_12785	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FIV04_12790	COG0762	integral membrane protein
FIV04_12810	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FIV04_12835	COG0741	lytic transglycosylase activity
FIV04_12875	COG0840	transmembrane signaling receptor activity
FIV04_12945	COG3437	response regulator, receiver
FIV04_12955	COG3706	GGDEF domain
FIV04_12985	COG0795	lipopolysaccharide-transporting ATPase activity
FIV04_12990	COG0795	lipopolysaccharide-transporting ATPase activity
FIV04_12995	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FIV04_13000	COG2927	DNA polymerase III (CHI subunit)
FIV04_13005	COG0525	valine-tRNA ligase activity
FIV04_13010	COG4783	chaperone-mediated protein folding
FIV04_13015	COG4269	membrane
FIV04_13055	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FIV04_13060	COG0251	oxidation-reduction process
FIV04_13065	COG0204	Acyl-transferase
FIV04_13075	COG5007	Belongs to the BolA IbaG family
FIV04_13085	COG2854	intermembrane phospholipid transfer
FIV04_13090	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FIV04_13095	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FIV04_13100	COG1127	ABC transporter
FIV04_13110	COG0517	IMP dehydrogenase activity
FIV04_13110	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FIV04_13115	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FIV04_13125	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FIV04_13130	COG1137	ATPase activity
FIV04_13140	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FIV04_13145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_13155	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_13160	COG2239	Acts as a magnesium transporter
FIV04_13165	COG0312	modulator of DNA gyrase
FIV04_13175	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FIV04_13180	COG1178	ABC-type Fe3 transport system permease component
FIV04_13185	COG4143	(ABC) transporter
FIV04_13190	COG0163	prenyltransferase activity
FIV04_13195	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FIV04_13210	COG2105	PFAM AIG2 family protein
FIV04_13215	COG2911	Protein conserved in bacteria
FIV04_13220	COG0729	surface antigen
FIV04_13225	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIV04_13235	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FIV04_13270	COG0529	Catalyzes the synthesis of activated sulfate
FIV04_13275	COG3273	potassium ion transport
FIV04_13275	COG0471	metal ion transport
FIV04_13285	COG0175	sulfate reduction
FIV04_13290	COG0737	Belongs to the 5'-nucleotidase family
FIV04_13300	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIV04_13300	COG0189	ligase activity
FIV04_13335	COG2153	protein acetylation
FIV04_13345	COG3061	Opacity-associated protein A
FIV04_13345	COG3266	domain, Protein
FIV04_13350	COG0545	Peptidyl-prolyl cis-trans isomerase
FIV04_13385	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FIV04_13395	COG0201	protein transport
FIV04_13415	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FIV04_13420	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FIV04_13430	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FIV04_13445	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FIV04_13460	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FIV04_13500	COG0051	transcription antitermination factor activity, RNA binding
FIV04_13510	COG2906	2 iron, 2 sulfur cluster binding
FIV04_13515	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FIV04_13520	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FIV04_13540	COG2923	Belongs to the DsrF TusC family
FIV04_13550	COG2964	Protein conserved in bacteria
FIV04_13555	COG0545	Peptidyl-prolyl cis-trans isomerase
FIV04_13570	COG1446	asparaginase
FIV04_13575	COG1047	Peptidyl-prolyl cis-trans
FIV04_13590	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIV04_13595	COG0488	(ABC) transporter
FIV04_13605	COG0429	hydrolase of the alpha beta-hydrolase fold
FIV04_13615	COG3954	Phosphoribulokinase
FIV04_13620	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FIV04_13640	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FIV04_13645	COG0512	Glutamine amidotransferase of anthranilate synthase
FIV04_13650	COG2356	endonuclease I
FIV04_13670	COG0180	Tryptophanyl-tRNA synthetase
FIV04_13680	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FIV04_13685	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FIV04_13730	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FIV04_13740	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FIV04_13740	COG0678	peroxiredoxin activity
FIV04_13745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FIV04_13750	COG0251	oxidation-reduction process
FIV04_13755	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FIV04_13755	COG0165	Argininosuccinate lyase
FIV04_13770	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FIV04_13795	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FIV04_13800	COG0527	aspartate kinase activity
FIV04_13800	COG0460	homoserine dehydrogenase
FIV04_13805	COG0626	cystathionine gamma-synthase activity
FIV04_13815	COG0281	malic enzyme
FIV04_13825	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FIV04_13830	COG1609	Transcriptional regulator
FIV04_13850	COG1575	Belongs to the MenA family. Type 1 subfamily
FIV04_13855	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIV04_13865	COG1494	fructose-1,6-bisphosphatase
FIV04_13900	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FIV04_13910	COG0745	RESPONSE REGULATOR receiver
FIV04_13915	COG2205	protein histidine kinase activity
FIV04_13920	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FIV04_13925	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FIV04_13935	COG1027	Aspartate ammonia-lyase
FIV04_13940	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FIV04_13945	COG4232	protein-disulfide reductase activity
FIV04_13955	COG2095	MarC family integral membrane protein
FIV04_13965	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIV04_13980	COG2205	protein histidine kinase activity
FIV04_13980	COG2198	Histidine kinase
FIV04_13980	COG0784	Response regulator, receiver
FIV04_13985	COG2814	Major facilitator Superfamily
FIV04_14005	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIV04_14010	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FIV04_14015	COG0511	ligase activity, forming carbon-carbon bonds
FIV04_14020	COG0439	Biotin carboxylase
FIV04_14035	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FIV04_14055	COG0151	Belongs to the GarS family
FIV04_14070	COG1253	flavin adenine dinucleotide binding
FIV04_14075	COG3068	Protein conserved in bacteria
FIV04_14100	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FIV04_14110	COG0085	RNA polymerase activity
FIV04_14115	COG0222	ribosome binding
FIV04_14120	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FIV04_14135	COG0250	Participates in transcription elongation, termination and antitermination
FIV04_14140	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FIV04_14145	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FIV04_14170	COG1072	(Pantothenic acid kinase))
FIV04_14180	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FIV04_14190	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIV04_14275	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FIV04_14280	COG0137	argininosuccinate synthase activity
FIV04_14285	COG4206	TonB-dependent receptor
FIV04_14310	COG0534	Mate efflux family protein
FIV04_14335	COG3161	chorismate lyase activity
FIV04_14340	COG1580	Controls the rotational direction of flagella during chemotaxis
FIV04_14360	COG2177	Part of the ABC transporter FtsEX involved in
FIV04_14365	COG2884	Cell division ATP-binding protein ftsE
FIV04_14370	COG0552	protein localization to endoplasmic reticulum
FIV04_14375	COG0742	ribosomal rna small subunit methyltransferase
FIV04_14385	COG2095	MarC family integral membrane protein
FIV04_14425	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FIV04_14430	COG0640	Transcriptional regulator
FIV04_14435	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FIV04_14440	COG1280	lysine exporter protein (LysE YggA)
FIV04_14450	COG0561	phosphatase activity
FIV04_14470	COG2200	EAL domain
FIV04_14470	COG3287	FIST C domain
FIV04_14470	COG2199	diguanylate cyclase activity
FIV04_14475	COG3287	FIST C domain
FIV04_14475	COG2199	diguanylate cyclase activity
FIV04_14475	COG2200	EAL domain
FIV04_14480	COG1011	Hydrolase
FIV04_14500	COG0019	diaminopimelate decarboxylase activity
FIV04_14510	COG3072	Adenylate cyclase
FIV04_14520	COG1587	Uroporphyrinogen-III synthase
FIV04_14525	COG2959	enzyme of heme biosynthesis
FIV04_14530	COG3071	HemY protein
FIV04_14595	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FIV04_14605	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FIV04_14610	COG3118	belongs to the thioredoxin family
FIV04_14625	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FIV04_14635	COG0514	ATP-dependent DNA helicase (RecQ)
FIV04_14640	COG2962	Rard protein
FIV04_14650	COG1280	lysine exporter protein (LysE YggA)
FIV04_14655	COG0405	Gamma-glutamyltransferase
FIV04_14665	COG0210	DNA helicase
FIV04_14675	COG3220	belongs to the UPF0276 family
FIV04_14700	COG0583	DNA-binding transcription factor activity
FIV04_14705	COG0006	proline dipeptidase activity
FIV04_14705	COG0006	proline dipeptidase activity
FIV04_14725	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FIV04_14745	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FIV04_14750	COG2132	Multicopper oxidase
FIV04_14805	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FIV04_14825	COG0009	L-threonylcarbamoyladenylate synthase
FIV04_14830	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FIV04_14835	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FIV04_14840	COG0551	DNA topoisomerase type I activity
FIV04_14850	COG0758	DNA mediated transformation
FIV04_14870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FIV04_14870	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FIV04_14875	COG0569	domain protein
FIV04_14880	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIV04_14890	COG1272	protein, Hemolysin III
FIV04_14895	COG4326	sporulation control protein
FIV04_14905	COG3084	Protein conserved in bacteria
FIV04_14915	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FIV04_14920	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FIV04_14930	COG0606	chelatase, subunit chli
FIV04_14970	COG0606	chelatase, subunit chli
FIV04_14980	COG3978	acetolactate synthase activity
FIV04_14985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FIV04_14990	COG0129	dihydroxy-acid dehydratase activity
FIV04_15000	COG0583	DNA-binding transcription factor activity
FIV04_15005	COG2814	Major facilitator Superfamily
FIV04_15010	COG3706	GGDEF domain
FIV04_15020	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FIV04_15025	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FIV04_15030	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FIV04_15035	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FIV04_15045	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FIV04_15055	COG0356	it plays a direct role in the translocation of protons across the membrane
FIV04_15060	COG3312	ion transport
FIV04_15065	COG1475	DNA binding
FIV04_15070	COG1192	Involved in chromosome partitioning
FIV04_15085	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FIV04_15110	COG1126	abc transporter atp-binding protein
FIV04_15130	COG3712	iron ion homeostasis
FIV04_15165	COG0811	peptide transport
FIV04_15170	COG0848	biopolymer transport protein
FIV04_15180	COG0277	FAD linked oxidase domain protein
FIV04_15185	COG0583	DNA-binding transcription factor activity
FIV04_15220	COG1294	oxidase, subunit
FIV04_15225	COG1271	oxidase subunit
FIV04_15230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIV04_15235	COG0840	transmembrane signaling receptor activity
FIV04_15255	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FIV04_15265	COG0494	nUDIX hydrolase
FIV04_15270	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FIV04_15280	COG3706	GGDEF domain
FIV04_15285	COG1214	PFAM Peptidase M22, glycoprotease
FIV04_15285	COG0456	acetyltransferase
FIV04_15310	COG1929	Belongs to the glycerate kinase type-1 family
FIV04_15315	COG0383	alpha-mannosidase activity
FIV04_15320	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_15320	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_15320	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_15325	COG2188	Transcriptional regulator
FIV04_15335	COG0840	transmembrane signaling receptor activity
FIV04_15340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_15345	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_15350	COG2067	long-chain fatty acid transport protein
FIV04_15355	COG2267	carboxylic ester hydrolase activity
FIV04_15360	COG0745	RESPONSE REGULATOR receiver
FIV04_15370	COG3069	C4-dicarboxylate transmembrane transporter activity
FIV04_15375	COG2197	response regulator
FIV04_15380	COG3850	Histidine kinase
FIV04_15395	COG0243	molybdopterin cofactor binding
FIV04_15425	COG0183	Belongs to the thiolase family
FIV04_15465	COG5002	protein histidine kinase activity
FIV04_15470	COG0745	RESPONSE REGULATOR receiver
FIV04_15495	COG1280	lysine exporter protein (LysE YggA)
FIV04_15500	COG0513	Belongs to the DEAD box helicase family
FIV04_15505	COG0523	cobalamin synthesis protein
FIV04_15520	COG2202	Pas domain
FIV04_15520	COG2200	EAL domain
FIV04_15520	COG2199	diguanylate cyclase activity
FIV04_15525	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIV04_15525	COG1017	nitric oxide dioxygenase activity
FIV04_15535	COG3604	Transcriptional regulator
FIV04_15545	COG2885	chlorophyll binding
FIV04_15555	COG0545	Peptidyl-prolyl cis-trans isomerase
FIV04_15560	COG1309	transcriptional regulator
FIV04_15565	COG2130	NADP-dependent
FIV04_15575	COG0564	pseudouridine synthase activity
FIV04_15580	COG0583	DNA-binding transcription factor activity
FIV04_15585	COG1686	Belongs to the peptidase S11 family
FIV04_15600	COG3706	GGDEF domain
FIV04_15610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIV04_15630	COG3033	Beta-eliminating lyase
FIV04_15650	COG2207	Transcriptional regulator
FIV04_15655	COG1979	alcohol dehydrogenase
FIV04_15660	COG1126	abc transporter atp-binding protein
FIV04_15665	COG0765	amino acid transport
FIV04_15675	COG0765	amino acid transport
FIV04_15680	COG4206	TonB-dependent receptor
FIV04_15685	COG4977	sequence-specific DNA binding
FIV04_15695	COG1280	lysine exporter protein (LysE YggA)
FIV04_15780	COG1902	pentaerythritol trinitrate reductase activity
FIV04_15800	COG1024	Enoyl-CoA hydratase
FIV04_15805	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_15830	COG1120	ATPase activity
FIV04_15835	COG2814	Major facilitator Superfamily
FIV04_15840	COG2133	pyrroloquinoline quinone binding
FIV04_15845	COG1278	Cold shock
FIV04_15850	COG4681	YaeQ
FIV04_15865	COG0302	gtp cyclohydrolase
FIV04_15895	COG2897	thiosulfate sulfurtransferase activity
FIV04_15915	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FIV04_15920	COG1522	sequence-specific DNA binding
FIV04_15930	COG0840	transmembrane signaling receptor activity
FIV04_15935	COG1560	Kdo2-lipid A biosynthetic process
FIV04_15940	COG2814	Major facilitator Superfamily
FIV04_15945	COG0583	DNA-binding transcription factor activity
FIV04_15950	COG5002	protein histidine kinase activity
FIV04_15950	COG0784	Response regulator, receiver
FIV04_15955	COG3437	response regulator, receiver
FIV04_15960	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIV04_15975	COG2186	Transcriptional regulator
FIV04_15980	COG2186	Transcriptional regulator
FIV04_16005	COG4604	ABC transporter, ATP-binding protein
FIV04_16010	COG4605	iron ion homeostasis
FIV04_16015	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_16020	COG4607	ABC-type enterochelin transport system periplasmic component
FIV04_16045	COG1917	Cupin 2, conserved barrel domain protein
FIV04_16050	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_16055	COG0800	Aldolase
FIV04_16085	COG0628	permease
FIV04_16095	COG1566	PFAM secretion protein HlyD family protein
FIV04_16125	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_16165	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FIV04_16170	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FIV04_16175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FIV04_16180	COG1116	anion transmembrane transporter activity
FIV04_16185	COG0351	phosphomethylpyrimidine kinase
FIV04_16200	COG1253	flavin adenine dinucleotide binding
FIV04_16215	COG3710	Transcriptional regulator
FIV04_16245	COG2226	methyltransferase
FIV04_16270	COG0348	domain, Protein
FIV04_16275	COG0437	4 iron, 4 sulfur cluster binding
FIV04_16295	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FIV04_16325	COG0745	RESPONSE REGULATOR receiver
FIV04_16330	COG2205	protein histidine kinase activity
FIV04_16390	COG0516	GMP reductase activity
FIV04_16420	COG0534	Mate efflux family protein
FIV04_16425	COG0583	DNA-binding transcription factor activity
FIV04_16430	COG0840	transmembrane signaling receptor activity
FIV04_16435	COG0840	transmembrane signaling receptor activity
FIV04_16440	COG0673	inositol 2-dehydrogenase activity
FIV04_16550	COG3501	Rhs element vgr protein
FIV04_16560	COG2814	Major facilitator Superfamily
FIV04_16570	COG0784	Response regulator, receiver
FIV04_16570	COG3437	response regulator, receiver
FIV04_16575	COG4191	Histidine kinase
FIV04_16575	COG0784	Response regulator, receiver
FIV04_16595	COG3135	benzoate transporter
FIV04_16600	COG1396	sequence-specific DNA binding
FIV04_16605	COG1752	Esterase of the alpha-beta hydrolase superfamily
FIV04_16610	COG2356	endonuclease I
FIV04_16645	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_16655	COG3706	GGDEF domain
FIV04_16670	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FIV04_16680	COG0513	Belongs to the DEAD box helicase family
FIV04_16700	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIV04_16745	COG0667	Aldo Keto reductase
FIV04_16750	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FIV04_16755	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FIV04_16760	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FIV04_16765	COG0778	Nitroreductase
FIV04_16770	COG0513	Belongs to the DEAD box helicase family
FIV04_16775	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FIV04_16780	COG2176	DNA-directed DNA polymerase activity
FIV04_16795	COG0513	Belongs to the DEAD box helicase family
FIV04_16805	COG4989	oxidoreductase activity
FIV04_16835	COG2197	response regulator
FIV04_16845	COG0668	transmembrane transport
FIV04_16855	COG4232	protein-disulfide reductase activity
FIV04_16880	COG0697	spore germination
FIV04_16895	COG2814	Major facilitator Superfamily
FIV04_16900	COG0583	DNA-binding transcription factor activity
FIV04_16905	COG5001	Diguanylate cyclase
FIV04_16910	COG0739	heme binding
FIV04_16945	COG0366	Alpha amylase catalytic
FIV04_16950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FIV04_16955	COG2205	protein histidine kinase activity
FIV04_16955	COG0784	Response regulator, receiver
FIV04_16960	COG2096	Adenosyltransferase
FIV04_16970	COG0748	coenzyme F420 binding
FIV04_16975	COG3721	Heme iron utilization protein
FIV04_16990	COG0811	peptide transport
FIV04_16995	COG0848	biopolymer transport protein
FIV04_17005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_17010	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FIV04_17060	COG3217	Mosc domain protein beta barrel domain protein
FIV04_17060	COG0633	Ferredoxin
FIV04_17070	COG0401	homolog of Blt101
FIV04_17080	COG3706	GGDEF domain
FIV04_17100	COG0583	DNA-binding transcription factor activity
FIV04_17115	COG0312	modulator of DNA gyrase
FIV04_17120	COG0312	modulator of DNA gyrase
FIV04_17145	COG1136	(ABC) transporter
FIV04_17170	COG2814	Major facilitator Superfamily
FIV04_17180	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FIV04_17215	COG1175	transmembrane transport
FIV04_17225	COG3842	ATPase activity
FIV04_17240	COG0714	Associated with various cellular activities
FIV04_17260	COG2304	oxidoreductase activity
FIV04_17270	COG3706	GGDEF domain
FIV04_17275	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIV04_17280	COG0581	inorganic phosphate transmembrane transporter activity
FIV04_17285	COG0573	inorganic phosphate transmembrane transporter activity
FIV04_17290	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIV04_17295	COG0840	transmembrane signaling receptor activity
FIV04_17315	COG4771	TonB-dependent receptor
FIV04_17320	COG1770	oligopeptidase
FIV04_17325	COG5380	lipid catabolic process
FIV04_17330	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FIV04_17335	COG3240	lipase activity
FIV04_17340	COG0513	Belongs to the DEAD box helicase family
FIV04_17350	COG1376	ErfK ybiS ycfS ynhG family protein
FIV04_17350	COG1388	LysM domain
FIV04_17355	COG0813	purine-nucleoside phosphorylase activity
FIV04_17370	COG3706	GGDEF domain
FIV04_17385	COG1566	PFAM secretion protein HlyD family protein
FIV04_17395	COG1122	ATPase activity
FIV04_17410	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FIV04_17415	COG1640	4-alpha-glucanotransferase
FIV04_17420	COG0058	SHG alpha-glucan phosphorylase activity
FIV04_17445	COG1999	signal sequence binding
FIV04_17455	COG1162	GTPase activity
FIV04_17460	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FIV04_17505	COG0366	Alpha amylase catalytic
FIV04_17550	COG2384	SAM-dependent methyltransferase
FIV04_17555	COG0204	Acyl-transferase
FIV04_17565	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FIV04_17580	COG3615	Tellurite resistance protein tehB
FIV04_17585	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIV04_17590	COG4667	esterase of the alpha-beta hydrolase superfamily
FIV04_17595	COG1929	Belongs to the glycerate kinase type-1 family
FIV04_17605	COG3623	hexulose-6-phosphate isomerase
FIV04_17610	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FIV04_17615	COG0561	phosphatase activity
FIV04_17660	COG0673	inositol 2-dehydrogenase activity
FIV04_17670	COG0583	DNA-binding transcription factor activity
FIV04_17685	COG0789	Transcriptional regulator
FIV04_17695	COG0561	phosphatase activity
FIV04_17715	COG0798	PFAM Bile acid sodium symporter
FIV04_17720	COG0583	DNA-binding transcription factor activity
FIV04_17730	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FIV04_17740	COG1349	DNA-binding transcription factor activity
FIV04_17745	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FIV04_17750	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_17755	COG0583	DNA-binding transcription factor activity
FIV04_17770	COG0300	oxidoreductase activity
FIV04_17790	COG1120	ATPase activity
FIV04_17795	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FIV04_17815	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FIV04_17820	COG0488	(ABC) transporter
FIV04_17825	COG0667	Aldo Keto reductase
FIV04_17835	COG2207	Transcriptional regulator
FIV04_17835	COG1917	Cupin 2, conserved barrel domain protein
FIV04_17845	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FIV04_17865	COG1940	carbohydrate kinase activity
FIV04_17875	COG3833	ABC-type maltose transport systems, permease component
FIV04_17880	COG1175	transmembrane transport
FIV04_17885	COG2182	Extracellular solute-binding protein
FIV04_17895	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FIV04_17910	COG3842	ATPase activity
FIV04_17920	COG0583	DNA-binding transcription factor activity
FIV04_17925	COG2814	Major facilitator Superfamily
FIV04_17930	COG0110	maltose O-acetyltransferase activity
FIV04_17940	COG1609	Transcriptional regulator
FIV04_17945	COG2723	6-phospho-beta-galactosidase activity
FIV04_17965	COG0346	lactoylglutathione lyase activity
FIV04_17985	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FIV04_17985	COG0646	methionine synthase
FIV04_17990	COG0735	belongs to the Fur family
FIV04_18005	COG3321	synthase
FIV04_18005	COG0604	alcohol dehydrogenase
FIV04_18005	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_18015	COG2814	Major facilitator Superfamily
FIV04_18020	COG2207	Transcriptional regulator
FIV04_18060	COG2188	Transcriptional regulator
FIV04_18075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_18075	COG1263	PTS System
FIV04_18080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_18085	COG0800	Aldolase
FIV04_18090	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FIV04_18100	COG1846	Transcriptional regulator
FIV04_18105	COG1132	(ABC) transporter
FIV04_18110	COG1132	(ABC) transporter
FIV04_18115	COG4771	TonB-dependent receptor
FIV04_18130	COG4175	Glycine betaine
FIV04_18175	COG3842	ATPase activity
FIV04_18220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FIV04_18225	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_18230	COG2957	Belongs to the agmatine deiminase family
FIV04_18240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIV04_18245	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_18250	COG1917	Cupin 2, conserved barrel domain protein
FIV04_18250	COG1396	sequence-specific DNA binding
FIV04_18255	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FIV04_18265	COG0174	glutamine synthetase
FIV04_18270	COG1757	Na H antiporter
FIV04_18285	COG0583	DNA-binding transcription factor activity
FIV04_18300	COG1132	(ABC) transporter
FIV04_18335	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIV04_18410	COG1444	tRNA N-acetyltransferase activity
FIV04_18445	COG4608	Belongs to the ABC transporter superfamily
FIV04_18450	COG0444	Belongs to the ABC transporter superfamily
FIV04_18460	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FIV04_18460	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FIV04_18480	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FIV04_18490	COG0625	glutathione transferase activity
FIV04_18495	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FIV04_18500	COG3186	Phenylalanine-4-hydroxylase
FIV04_18515	COG0217	transcriptional regulatory protein
FIV04_18530	COG2084	Dehydrogenase
FIV04_18555	COG1136	(ABC) transporter
FIV04_18555	COG0577	efflux transmembrane transporter activity
FIV04_18575	COG3275	phosphorelay sensor kinase activity
FIV04_18580	COG3279	Response regulator of the LytR AlgR family
FIV04_18585	COG0612	Peptidase, M16
FIV04_18595	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIV04_18600	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FIV04_18610	COG1902	pentaerythritol trinitrate reductase activity
FIV04_18635	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FIV04_18640	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FIV04_18645	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FIV04_18670	COG1881	PFAM PEBP family protein
FIV04_18675	COG2207	Transcriptional regulator
FIV04_18680	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FIV04_18685	COG0667	Aldo Keto reductase
FIV04_18700	COG0583	DNA-binding transcription factor activity
FIV04_18705	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIV04_18720	COG0679	Auxin Efflux Carrier
FIV04_18740	COG0450	alkyl hydroperoxide reductase
FIV04_18760	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FIV04_18770	COG1233	COG1233 Phytoene dehydrogenase and related
FIV04_18785	COG0415	Belongs to the DNA photolyase family
FIV04_18795	COG3806	Anti-sigma factor
FIV04_18800	COG1595	DNA-templated transcription, initiation
FIV04_18810	COG1942	4-Oxalocrotonate Tautomerase
FIV04_18825	COG0786	glutamate:sodium symporter activity
FIV04_18850	COG2213	PTS system mannitol-specific
FIV04_18850	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_18855	COG0246	Mannitol dehydrogenase
FIV04_18860	COG3722	fumarate hydratase activity
FIV04_18885	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FIV04_18900	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FIV04_18910	COG3366	ferrous iron transmembrane transporter activity
FIV04_18915	COG0700	Nucleoside recognition
FIV04_18925	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FIV04_18945	COG0671	phosphoesterase, PA-phosphatase related
FIV04_18980	COG0596	Alpha beta hydrolase
FIV04_19000	COG1741	Belongs to the pirin family
FIV04_19010	COG5001	Diguanylate cyclase
FIV04_19040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIV04_19045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FIV04_19045	COG2207	Transcriptional regulator
FIV04_19055	COG1304	FMN binding
FIV04_19060	COG1620	l-lactate permease
FIV04_19065	COG0583	DNA-binding transcription factor activity
FIV04_19070	COG1505	serine-type exopeptidase activity
FIV04_19075	COG4172	Belongs to the ABC transporter superfamily
FIV04_19085	COG1067	ATP-dependent peptidase activity
FIV04_19135	COG0583	DNA-binding transcription factor activity
FIV04_19145	COG1846	Transcriptional regulator
FIV04_19155	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FIV04_19160	COG3960	tartronate-semialdehyde synthase activity
FIV04_19165	COG3622	Belongs to the hyi family
FIV04_19170	COG2084	Dehydrogenase
FIV04_19185	COG0402	S-adenosylhomocysteine deaminase activity
FIV04_19210	COG2252	PERMEase
FIV04_19230	COG4266	Belongs to the allantoicase family
FIV04_19235	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FIV04_19255	COG1228	amidohydrolase
FIV04_19265	COG0402	S-adenosylhomocysteine deaminase activity
FIV04_19275	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FIV04_19285	COG2186	Transcriptional regulator
FIV04_19295	COG1418	mRNA catabolic process
FIV04_19300	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_19305	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FIV04_19325	COG0625	glutathione transferase activity
FIV04_19330	COG0583	DNA-binding transcription factor activity
FIV04_19335	COG3284	Transcriptional regulator
FIV04_19340	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_19355	COG1288	antiporter activity
FIV04_19380	COG0167	dihydroorotate dehydrogenase activity
FIV04_19400	COG0745	RESPONSE REGULATOR receiver
FIV04_19405	COG2205	protein histidine kinase activity
FIV04_19410	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FIV04_19415	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FIV04_19445	COG0745	RESPONSE REGULATOR receiver
FIV04_19450	COG2205	protein histidine kinase activity
FIV04_19475	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FIV04_19495	COG0251	oxidation-reduction process
FIV04_19525	COG0583	DNA-binding transcription factor activity
FIV04_19550	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_19555	COG3842	ATPase activity
FIV04_19560	COG0765	amino acid transport
FIV04_19570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_19585	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_19585	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_19585	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_19590	COG2207	Transcriptional regulator
FIV04_19600	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_19605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_19620	COG0840	transmembrane signaling receptor activity
FIV04_19625	COG2188	Transcriptional regulator
FIV04_19635	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_19640	COG1397	ADP-ribosylglycohydrolase
FIV04_19645	COG2211	Major facilitator Superfamily
FIV04_19660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FIV04_19675	COG0840	transmembrane signaling receptor activity
FIV04_19685	COG0583	DNA-binding transcription factor activity
FIV04_19725	COG2204	response regulator
FIV04_19740	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FIV04_19745	COG3639	organic phosphonate transmembrane transporter activity
FIV04_19750	COG3639	organic phosphonate transmembrane transporter activity
FIV04_19770	COG1288	antiporter activity
FIV04_19775	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FIV04_19780	COG3047	cAMP biosynthetic process
FIV04_19805	COG4251	negative regulation of phosphorylation
FIV04_19805	COG2203	Gaf domain
FIV04_19805	COG3706	GGDEF domain
FIV04_19805	COG5001	Diguanylate cyclase
FIV04_19810	COG4221	oxidoreductase activity
FIV04_19820	COG1733	regulation of RNA biosynthetic process
FIV04_19825	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_19835	COG2910	NAD(P)H-binding
FIV04_19840	COG0583	DNA-binding transcription factor activity
FIV04_19875	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FIV04_19950	COG0604	alcohol dehydrogenase
FIV04_19950	COG3321	synthase
FIV04_19965	COG0446	pyridine nucleotide-disulphide oxidoreductase
FIV04_19975	COG0251	oxidation-reduction process
FIV04_19980	COG2964	Protein conserved in bacteria
FIV04_19985	COG0534	Mate efflux family protein
FIV04_20055	COG2999	glutathione oxidoreductase activity
FIV04_20065	COG0673	inositol 2-dehydrogenase activity
FIV04_20080	COG0584	glycerophosphoryl diester phosphodiesterase
FIV04_20095	COG0189	ligase activity
FIV04_20095	COG4067	protein conserved in archaea
FIV04_20110	COG0840	transmembrane signaling receptor activity
FIV04_20130	COG3708	Transcriptional regulator
FIV04_20130	COG2207	Transcriptional regulator
FIV04_20145	COG0564	pseudouridine synthase activity
FIV04_20170	COG1131	(ABC) transporter
FIV04_20185	COG2200	EAL domain
FIV04_20195	COG5001	Diguanylate cyclase
FIV04_20205	COG0745	RESPONSE REGULATOR receiver
FIV04_20210	COG2205	protein histidine kinase activity
FIV04_20220	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIV04_20225	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIV04_20240	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FIV04_20265	COG0513	Belongs to the DEAD box helicase family
FIV04_20285	COG3706	GGDEF domain
FIV04_20290	COG1278	Cold shock
FIV04_20295	COG0402	S-adenosylhomocysteine deaminase activity
FIV04_20300	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FIV04_20310	COG1566	PFAM secretion protein HlyD family protein
FIV04_20335	COG0531	amino acid
FIV04_20370	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FIV04_20415	COG2827	Endonuclease containing a URI domain
FIV04_20445	COG0443	Heat shock 70 kDa protein
FIV04_20455	COG0179	Fumarylacetoacetate (FAA) hydrolase
FIV04_20460	COG1280	lysine exporter protein (LysE YggA)
FIV04_20465	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FIV04_20485	COG1845	cytochrome c oxidase, subunit III
FIV04_20500	COG1612	heme a metabolic process
FIV04_20505	COG0109	protoheme IX farnesyltransferase activity
FIV04_20525	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FIV04_20535	COG0668	transmembrane transport
FIV04_20540	COG0569	domain protein
FIV04_20545	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FIV04_20550	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIV04_20550	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FIV04_20555	COG1765	OsmC-like protein
FIV04_20560	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FIV04_20560	COG2885	chlorophyll binding
FIV04_20575	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FIV04_20580	COG1840	ABC-type Fe3 transport system, periplasmic component
FIV04_20585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIV04_20590	COG3842	ATPase activity
FIV04_20600	COG2188	Transcriptional regulator
FIV04_20610	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FIV04_20620	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FIV04_20625	COG3265	gluconokinase activity
FIV04_20630	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FIV04_20635	COG1609	Transcriptional regulator
FIV04_20650	COG1760	l-serine dehydratase
FIV04_20675	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FIV04_20690	COG0583	DNA-binding transcription factor activity
FIV04_20695	COG2249	NAD(P)H dehydrogenase (quinone) activity
FIV04_20715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_20715	COG1263	PTS System
FIV04_20720	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_20725	COG1621	beta-fructofuranosidase activity
FIV04_20735	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FIV04_20745	COG0523	cobalamin synthesis protein
FIV04_20750	COG2988	succinylglutamate desuccinylase activity
FIV04_20755	COG1132	(ABC) transporter
FIV04_20760	COG1132	(ABC) transporter
FIV04_20770	COG3119	arylsulfatase activity
FIV04_20790	COG0739	heme binding
FIV04_20795	COG0393	Putative heavy-metal-binding
FIV04_20835	COG0346	lactoylglutathione lyase activity
FIV04_20845	COG2211	Major facilitator Superfamily
FIV04_20860	COG0156	8-amino-7-oxononanoate synthase activity
FIV04_20915	COG1454	alcohol dehydrogenase
FIV04_20925	COG1011	Hydrolase
FIV04_20930	COG2203	Gaf domain
FIV04_20930	COG4251	negative regulation of phosphorylation
FIV04_20930	COG5001	Diguanylate cyclase
FIV04_20930	COG3706	GGDEF domain
FIV04_20955	COG1328	CTP reductase activity
FIV04_20960	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FIV04_20975	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FIV04_20980	COG3547	Transposase (IS116 IS110 IS902 family)
FIV04_21010	COG0583	DNA-binding transcription factor activity
FIV04_21030	COG1289	transmembrane transporter activity
FIV04_21035	COG0210	DNA helicase
FIV04_21050	COG1879	ABC-type sugar transport system periplasmic component
FIV04_21055	COG2198	Histidine kinase
FIV04_21055	COG2205	protein histidine kinase activity
FIV04_21055	COG0784	Response regulator, receiver
FIV04_21065	COG1629	transport
FIV04_21095	COG1403	HNH endonuclease
FIV04_21100	COG0625	glutathione transferase activity
FIV04_21115	COG2205	protein histidine kinase activity
FIV04_21120	COG0745	RESPONSE REGULATOR receiver
FIV04_21155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_21155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_21155	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FIV04_21160	COG1105	Belongs to the carbohydrate kinase PfkB family
FIV04_21165	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_21165	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_21170	COG1609	Transcriptional regulator
FIV04_21175	COG0515	serine threonine protein kinase
FIV04_21175	COG2815	serine threonine protein kinase
FIV04_21180	COG2223	nitrite transmembrane transporter activity
FIV04_21190	COG2146	nitrite reductase [NAD(P)H] activity
FIV04_21190	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIV04_21195	COG0243	molybdopterin cofactor binding
FIV04_21305	COG0642	Histidine kinase
FIV04_21310	COG0745	RESPONSE REGULATOR receiver
FIV04_21315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_21325	COG1538	Outer membrane efflux protein
FIV04_21340	COG0789	Transcriptional regulator
FIV04_21345	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FIV04_21350	COG1247	-acetyltransferase
FIV04_21380	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FIV04_21390	COG0583	DNA-binding transcription factor activity
FIV04_21395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_21425	COG2205	protein histidine kinase activity
FIV04_21425	COG0784	Response regulator, receiver
FIV04_21430	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FIV04_21435	COG0840	transmembrane signaling receptor activity
FIV04_21440	COG1609	Transcriptional regulator
FIV04_21445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_21450	COG1879	ABC-type sugar transport system periplasmic component
FIV04_21455	COG1172	Belongs to the binding-protein-dependent transport system permease family
FIV04_21460	COG1129	ABC transporter
FIV04_21465	COG1869	D-ribose catabolic process
FIV04_21500	COG4166	transmembrane transport
FIV04_21505	COG4174	ABC transporter (Permease)
FIV04_21510	COG4239	(ABC) transporter, permease
FIV04_21515	COG4172	Belongs to the ABC transporter superfamily
FIV04_21520	COG4174	ABC transporter (Permease)
FIV04_21525	COG4239	(ABC) transporter, permease
FIV04_21530	COG4166	transmembrane transport
FIV04_21535	COG0444	Belongs to the ABC transporter superfamily
FIV04_21540	COG4608	Belongs to the ABC transporter superfamily
FIV04_21555	COG0745	RESPONSE REGULATOR receiver
FIV04_21560	COG0642	Histidine kinase
FIV04_21580	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FIV04_21585	COG0573	inorganic phosphate transmembrane transporter activity
FIV04_21590	COG0581	inorganic phosphate transmembrane transporter activity
FIV04_21595	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FIV04_21615	COG1619	proteins homologs of microcin C7 resistance protein MccF
FIV04_21620	COG0583	DNA-binding transcription factor activity
FIV04_21630	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_21640	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FIV04_21670	COG0745	RESPONSE REGULATOR receiver
FIV04_21675	COG2205	protein histidine kinase activity
FIV04_21700	COG3278	Belongs to the heme-copper respiratory oxidase family
FIV04_21710	COG0778	Nitroreductase
FIV04_21725	COG0454	-acetyltransferase
FIV04_21755	COG2205	protein histidine kinase activity
FIV04_21755	COG0784	Response regulator, receiver
FIV04_21765	COG3119	arylsulfatase activity
FIV04_21770	COG3119	arylsulfatase activity
FIV04_21780	COG0714	Associated with various cellular activities
FIV04_21810	COG0583	DNA-binding transcription factor activity
FIV04_21840	COG0641	radical SAM
FIV04_21860	COG2205	protein histidine kinase activity
FIV04_21860	COG0784	Response regulator, receiver
FIV04_21860	COG5002	protein histidine kinase activity
FIV04_21880	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_21905	COG0745	RESPONSE REGULATOR receiver
FIV04_21910	COG1366	Belongs to the anti-sigma-factor antagonist family
FIV04_21915	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FIV04_21995	COG1858	cytochrome C peroxidase
FIV04_22000	COG1858	cytochrome C peroxidase
FIV04_22010	COG0243	molybdopterin cofactor binding
FIV04_22025	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_22035	COG1288	antiporter activity
FIV04_22065	COG1280	lysine exporter protein (LysE YggA)
FIV04_22085	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FIV04_22090	COG2146	nitrite reductase [NAD(P)H] activity
FIV04_22095	COG2116	formate transmembrane transporter activity
FIV04_22100	COG1648	precorrin-2 dehydrogenase activity
FIV04_22100	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FIV04_22115	COG0745	RESPONSE REGULATOR receiver
FIV04_22120	COG2205	protein histidine kinase activity
FIV04_22125	COG3300	MHYT domain
FIV04_22125	COG5001	Diguanylate cyclase
FIV04_22130	COG1301	dicarboxylic acid transport
FIV04_22145	COG0811	peptide transport
FIV04_22150	COG0811	peptide transport
FIV04_22155	COG0848	biopolymer transport protein
FIV04_22195	COG0803	Belongs to the bacterial solute-binding protein 9 family
FIV04_22200	COG1121	(ABC) transporter
FIV04_22205	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIV04_22225	COG0534	Mate efflux family protein
FIV04_22245	COG0318	PFAM AMP-dependent synthetase and ligase
FIV04_22255	COG3118	belongs to the thioredoxin family
FIV04_22260	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FIV04_22275	COG1328	CTP reductase activity
FIV04_22280	COG0602	queuosine metabolic process
FIV04_22285	COG0534	Mate efflux family protein
FIV04_22300	COG4067	protein conserved in archaea
FIV04_22300	COG0189	ligase activity
FIV04_22325	COG0725	ABC transporter, periplasmic molybdate-binding protein
FIV04_22330	COG4149	molybdate abc transporter
FIV04_22335	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FIV04_22345	COG3706	GGDEF domain
FIV04_22345	COG5001	Diguanylate cyclase
FIV04_22345	COG2203	Gaf domain
FIV04_22345	COG4251	negative regulation of phosphorylation
FIV04_22355	COG3706	GGDEF domain
FIV04_22370	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FIV04_22375	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FIV04_22405	COG3706	GGDEF domain
FIV04_22415	COG0023	Translation Initiation Factor
FIV04_22440	COG0045	succinate-CoA ligase (ADP-forming) activity
FIV04_22440	COG1042	CoA-binding domain protein
FIV04_22440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIV04_22445	COG0583	DNA-binding transcription factor activity
FIV04_22450	COG1629	transport
FIV04_22450	COG4771	TonB-dependent receptor
FIV04_22455	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIV04_22465	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FIV04_22470	COG1984	allophanate hydrolase subunit 2
FIV04_22480	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FIV04_22485	COG4181	ATPase activity
FIV04_22495	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FIV04_22500	COG5001	Diguanylate cyclase
FIV04_22500	COG1716	ATPase activity
FIV04_22510	COG0484	heat shock protein binding
FIV04_22530	COG4533	DNA binding
FIV04_22540	COG2050	protein possibly involved in aromatic compounds catabolism
FIV04_22555	COG2067	long-chain fatty acid transport protein
FIV04_22560	COG2267	carboxylic ester hydrolase activity
FIV04_22570	COG0513	Belongs to the DEAD box helicase family
FIV04_22585	COG0861	Integral membrane protein TerC family
FIV04_22595	COG0737	Belongs to the 5'-nucleotidase family
FIV04_22600	COG3593	DNA synthesis involved in DNA repair
FIV04_22610	COG0583	DNA-binding transcription factor activity
FIV04_22615	COG2116	formate transmembrane transporter activity
FIV04_22625	COG3038	cytochrome b561
FIV04_22640	COG2200	EAL domain
FIV04_22655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_22665	COG0513	Belongs to the DEAD box helicase family
FIV04_22670	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FIV04_22680	COG0814	amino acid
FIV04_22690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_22700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_22715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_22725	COG3706	GGDEF domain
FIV04_22730	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FIV04_22765	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FIV04_22780	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FIV04_22785	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FIV04_22795	COG1414	Transcriptional regulator
FIV04_22820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_22825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_22830	COG1120	ATPase activity
FIV04_22840	COG1741	Belongs to the pirin family
FIV04_22845	COG2259	Doxx family
FIV04_22855	COG2423	ornithine cyclodeaminase activity
FIV04_22860	COG1522	sequence-specific DNA binding
FIV04_22870	COG0840	transmembrane signaling receptor activity
FIV04_22875	COG0840	transmembrane signaling receptor activity
FIV04_22885	COG0431	NADPH-dependent FMN reductase
FIV04_22885	COG1053	succinate dehydrogenase
FIV04_22885	COG3976	FMN-binding domain protein
FIV04_22895	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FIV04_22900	COG3683	transport system, periplasmic component
FIV04_22915	COG3655	Transcriptional regulator
FIV04_22935	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FIV04_22960	COG4948	Mandelate Racemase Muconate Lactonizing
FIV04_22965	COG3976	FMN-binding domain protein
FIV04_22965	COG1053	succinate dehydrogenase
FIV04_22980	COG0583	DNA-binding transcription factor activity
FIV04_22985	COG0302	gtp cyclohydrolase
FIV04_22985	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FIV04_22990	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FIV04_22995	COG0302	gtp cyclohydrolase
FIV04_23010	COG3243	poly(R)-hydroxyalkanoic acid synthase
FIV04_23070	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FIV04_23090	COG3878	Protein conserved in bacteria
FIV04_23100	COG0431	NADPH-dependent FMN reductase
FIV04_23105	COG0583	DNA-binding transcription factor activity
FIV04_23110	COG0583	DNA-binding transcription factor activity
FIV04_23125	COG3604	Transcriptional regulator
FIV04_23145	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FIV04_23150	COG0583	DNA-binding transcription factor activity
FIV04_23155	COG3048	D-serine ammonia-lyase activity
FIV04_23190	COG4948	Mandelate Racemase Muconate Lactonizing
FIV04_23205	COG0848	biopolymer transport protein
FIV04_23210	COG0811	peptide transport
FIV04_23215	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FIV04_23230	COG1192	Involved in chromosome partitioning
FIV04_23265	COG0415	Belongs to the DNA photolyase family
FIV04_23275	COG4774	siderophore transport
FIV04_23290	COG2207	Transcriptional regulator
FIV04_23295	COG0346	lactoylglutathione lyase activity
FIV04_23305	COG3708	Transcriptional regulator
FIV04_23305	COG2207	Transcriptional regulator
FIV04_23315	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FIV04_23315	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FIV04_23325	COG1733	regulation of RNA biosynthetic process
FIV04_23365	COG1609	Transcriptional regulator
FIV04_23400	COG3250	beta-galactosidase activity
FIV04_23410	COG4580	involved in the transport of maltose and maltodextrins
FIV04_23420	COG2211	Major facilitator Superfamily
FIV04_23425	COG1733	regulation of RNA biosynthetic process
FIV04_23435	COG1271	oxidase subunit
FIV04_23440	COG1294	oxidase, subunit
FIV04_23445	COG1320	monovalent cation:proton antiporter activity
FIV04_23450	COG2212	antiporter activity
FIV04_23470	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FIV04_23470	COG2111	Na H antiporter
FIV04_23480	COG0589	response to stress
FIV04_23490	COG3706	GGDEF domain
FIV04_23500	COG0583	DNA-binding transcription factor activity
FIV04_23525	COG1902	pentaerythritol trinitrate reductase activity
FIV04_23530	COG0583	DNA-binding transcription factor activity
FIV04_23545	COG0697	spore germination
FIV04_23550	COG0583	DNA-binding transcription factor activity
FIV04_23560	COG4221	oxidoreductase activity
FIV04_23565	COG1280	lysine exporter protein (LysE YggA)
FIV04_23585	COG2207	Transcriptional regulator
FIV04_23595	COG1917	Cupin 2, conserved barrel domain protein
FIV04_23595	COG2207	Transcriptional regulator
FIV04_23615	COG0583	DNA-binding transcription factor activity
FIV04_23635	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_23640	COG0583	DNA-binding transcription factor activity
FIV04_23665	COG1012	belongs to the aldehyde dehydrogenase family
FIV04_23675	COG0778	Nitroreductase
FIV04_23740	COG1943	Transposase
FIV04_23805	COG2026	Addiction module toxin, RelE StbE family
FIV04_23820	COG0583	DNA-binding transcription factor activity
FIV04_23900	COG3547	Transposase (IS116 IS110 IS902 family)
FIV04_23920	COG0210	DNA helicase
FIV04_23940	COG0494	nUDIX hydrolase
FIV04_23980	COG1683	Conserved Protein
FIV04_24005	COG3710	Transcriptional regulator
FIV04_24010	COG1566	PFAM secretion protein HlyD family protein
FIV04_24020	COG0583	DNA-binding transcription factor activity
FIV04_24035	COG1538	Outer membrane efflux protein
FIV04_24050	COG2067	long-chain fatty acid transport protein
FIV04_24055	COG5001	Diguanylate cyclase
FIV04_24055	COG3300	MHYT domain
FIV04_24080	COG1454	alcohol dehydrogenase
FIV04_24095	COG1280	lysine exporter protein (LysE YggA)
FIV04_24100	COG0583	DNA-binding transcription factor activity
FIV04_24115	COG1733	regulation of RNA biosynthetic process
FIV04_24130	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FIV04_24140	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FIV04_24165	COG0840	transmembrane signaling receptor activity
FIV04_24195	COG0300	oxidoreductase activity
FIV04_24205	COG4771	TonB-dependent receptor
FIV04_24210	COG2382	esterase
FIV04_24215	COG4977	sequence-specific DNA binding
FIV04_24220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FIV04_24260	COG0784	Response regulator, receiver
FIV04_24260	COG2205	protein histidine kinase activity
FIV04_24275	COG0693	protein deglycase activity
FIV04_24280	COG1882	Formate acetyltransferase
FIV04_24290	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_24300	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_24310	COG3706	GGDEF domain
FIV04_24365	COG2770	Histidine kinase
FIV04_24365	COG3437	response regulator, receiver
FIV04_24390	COG2207	Transcriptional regulator
FIV04_24400	COG2233	PERMEase
FIV04_24405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_24415	COG2197	response regulator
FIV04_24425	COG1917	Cupin 2, conserved barrel domain protein
FIV04_24425	COG2207	Transcriptional regulator
FIV04_24435	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FIV04_24440	COG1121	(ABC) transporter
FIV04_24465	COG4774	siderophore transport
FIV04_24495	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FIV04_24505	COG1609	Transcriptional regulator
FIV04_24555	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FIV04_24565	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FIV04_24570	COG0583	DNA-binding transcription factor activity
FIV04_24585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_24610	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FIV04_24620	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FIV04_24630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FIV04_24635	COG1309	transcriptional regulator
FIV04_24645	COG0456	acetyltransferase
FIV04_24650	COG0730	response to heat
FIV04_24660	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FIV04_24670	COG2801	Transposase and inactivated derivatives
FIV04_24705	COG1686	Belongs to the peptidase S11 family
FIV04_24710	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FIV04_24715	COG0583	DNA-binding transcription factor activity
FIV04_24750	COG2199	diguanylate cyclase activity
FIV04_24750	COG2200	EAL domain
FIV04_24775	COG1929	Belongs to the glycerate kinase type-1 family
FIV04_24785	COG1263	PTS System
FIV04_24785	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FIV04_24790	COG2188	Transcriptional regulator
FIV04_24795	COG1120	ATPase activity
FIV04_24800	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_24805	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FIV04_24810	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FIV04_24815	COG4772	TonB-dependent receptor
FIV04_24840	COG4264	IucA IucC family
FIV04_24845	COG0019	diaminopimelate decarboxylase activity
FIV04_24885	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FIV04_24910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FIV04_24955	COG0346	lactoylglutathione lyase activity
FIV04_24970	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FIV04_24970	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FIV04_24985	COG0667	Aldo Keto reductase
FIV04_25040	COG0840	transmembrane signaling receptor activity
FIV04_25045	COG1073	alpha beta
FIV04_25065	COG1028	Short-chain dehydrogenase reductase Sdr
FIV04_25075	COG0583	DNA-binding transcription factor activity
FIV04_25085	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FIV04_25115	COG0069	glutamate synthase activity
FIV04_25135	COG1943	Transposase
FIV04_25140	COG0583	DNA-binding transcription factor activity
FIV04_25145	COG0783	Belongs to the Dps family
FIV04_25180	COG0384	phenazine biosynthesis protein PhzF
FIV04_25185	COG0678	peroxiredoxin activity
FIV04_25190	COG2814	Major facilitator Superfamily
FIV04_25195	COG0450	alkyl hydroperoxide reductase
FIV04_25205	COG0789	Transcriptional regulator
FIV04_25215	COG1653	transport
FIV04_25220	COG0840	transmembrane signaling receptor activity
FIV04_25225	COG0371	Dehydrogenase
FIV04_25230	COG1609	Transcriptional regulator
FIV04_25235	COG1105	Belongs to the carbohydrate kinase PfkB family
FIV04_25240	COG0517	IMP dehydrogenase activity
FIV04_25240	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FIV04_25245	COG4702	Belongs to the UPF0303 family
FIV04_25250	COG0673	inositol 2-dehydrogenase activity
FIV04_25255	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_25255	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FIV04_25255	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FIV04_25260	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_25265	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_25275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FIV04_25285	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FIV04_25290	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FIV04_25295	COG2207	Transcriptional regulator
FIV04_25310	COG0789	Transcriptional regulator
FIV04_25340	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FIV04_25380	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FIV04_25395	COG3070	regulator of competence-specific genes
FIV04_25555	COG4974	Belongs to the 'phage' integrase family
FIV04_25620	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FIV04_25640	COG2205	protein histidine kinase activity
FIV04_25645	COG0745	RESPONSE REGULATOR receiver
FIV04_25675	COG0789	Transcriptional regulator
FIV04_25710	COG2205	protein histidine kinase activity
FIV04_25710	COG0784	Response regulator, receiver
FIV04_25790	COG0592	DNA-directed DNA polymerase activity
FIV04_25900	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FIV04_25935	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FIV04_26365	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FIV04_26370	COG1085	galactose-1-phosphate uridylyltransferase
FIV04_26385	COG3064	Membrane
FIV04_26415	COG2199	diguanylate cyclase activity
FIV04_26415	COG2203	Gaf domain
FIV04_26420	COG3706	GGDEF domain
FIV04_26485	COG4115	mRNA cleavage
FIV04_26490	COG2161	toxin-antitoxin pair type II binding
FIV04_26625	COG3437	response regulator, receiver
FIV04_26625	COG0784	Response regulator, receiver
FIV04_26685	COG2207	Transcriptional regulator
FIV04_26685	COG1609	Transcriptional regulator
FIV04_26690	COG2017	converts alpha-aldose to the beta-anomer
FIV04_26700	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FIV04_26735	COG3437	response regulator, receiver
FIV04_26735	COG2770	Histidine kinase
FIV04_26820	COG0484	heat shock protein binding
FIV04_26905	COG1192	Involved in chromosome partitioning