locus-tag class description H9L11_00015 PF07720 Tetratricopeptide repeat H9L11_00020 PF04792 V antigen (LcrV) protein H9L11_00030 PF09621 Type III secretion system regulator (LcrR) H9L11_00035 PF00771 FHIPEP family H9L11_00055 PF09059 TyeA H9L11_00065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_00065 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9L11_00065 PF18269 T3SS EscN ATPase C-terminal domain H9L11_00080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9L11_00085 PF00813 FliP family H9L11_00090 PF01313 Bacterial export proteins, family 3 H9L11_00095 PF01311 Bacterial export proteins, family 1 H9L11_00100 PF01312 FlhB HrpN YscU SpaS Family H9L11_00105 PF12852 Cupin H9L11_00105 PF12833 Helix-turn-helix domain H9L11_00135 PF02661 Fic/DOC family H9L11_00145 PF02108 Flagellar assembly protein FliH H9L11_00155 PF01514 Secretory protein of YscJ/FliF family H9L11_00160 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI H9L11_00170 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) H9L11_00175 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF H9L11_00185 PF16697 Inner membrane component of T3SS, cytoplasmic domain H9L11_00185 PF16693 Inner membrane component of T3SS, periplasmic domain H9L11_00190 PF03958 Bacterial type II/III secretion system short domain H9L11_00190 PF00263 Bacterial type II and III secretion system protein H9L11_00205 PF12833 Helix-turn-helix domain H9L11_00225 PF00171 Aldehyde dehydrogenase family H9L11_00230 PF01590 GAF domain H9L11_00230 PF02954 Bacterial regulatory protein, Fis family H9L11_00230 PF00158 Sigma-54 interaction domain H9L11_00250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_00250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H9L11_00255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9L11_00260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H9L11_00260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H9L11_00265 PF02311 AraC-like ligand binding domain H9L11_00265 PF12833 Helix-turn-helix domain H9L11_00270 PF00593 TonB dependent receptor H9L11_00270 PF07715 TonB-dependent Receptor Plug Domain H9L11_00275 PF08279 HTH domain H9L11_00275 PF00072 Response regulator receiver domain H9L11_00275 PF12431 Transcriptional regulator H9L11_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_00280 PF17203 Single cache domain 3 H9L11_00280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9L11_00280 PF00989 PAS fold H9L11_00295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_00310 PF03466 LysR substrate binding domain H9L11_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_00325 PF08543 Phosphomethylpyrimidine kinase H9L11_00345 PF01810 LysE type translocator H9L11_00355 PF03466 LysR substrate binding domain H9L11_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_00360 PF00593 TonB dependent receptor H9L11_00360 PF07715 TonB-dependent Receptor Plug Domain H9L11_00375 PF00529 HlyD membrane-fusion protein of T1SS H9L11_00375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_00380 PF00664 ABC transporter transmembrane region H9L11_00380 PF03412 Peptidase C39 family H9L11_00380 PF00005 ABC transporter H9L11_00395 PF00691 OmpA family H9L11_00395 PF01389 OmpA-like transmembrane domain H9L11_00420 PF00665 Integrase core domain H9L11_00420 PF02796 Helix-turn-helix domain of resolvase H9L11_00425 PF01695 IstB-like ATP binding protein H9L11_00435 PF00589 Phage integrase family H9L11_00575 PF00293 NUDIX domain H9L11_00590 PF13495 Phage integrase, N-terminal SAM-like domain H9L11_00590 PF00589 Phage integrase family H9L11_00605 PF13302 Acetyltransferase (GNAT) domain H9L11_00610 PF18024 Helix-turn-helix domain H9L11_00610 PF00158 Sigma-54 interaction domain H9L11_00615 PF05128 Domain of unknown function (DUF697) H9L11_00620 PF04317 YcjX-like family, DUF463 H9L11_00635 PF00425 chorismate binding enzyme H9L11_00635 PF04715 Anthranilate synthase component I, N terminal region H9L11_00640 PF00072 Response regulator receiver domain H9L11_00640 PF09308 LuxQ, periplasmic H9L11_00640 PF00512 His Kinase A (phospho-acceptor) domain H9L11_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_00650 PF00293 NUDIX domain H9L11_00655 PF03222 Tryptophan/tyrosine permease family H9L11_00660 PF03315 Serine dehydratase beta chain H9L11_00660 PF03313 Serine dehydratase alpha chain H9L11_00665 PF04940 Sensors of blue-light using FAD H9L11_00665 PF00563 EAL domain H9L11_00675 PF01242 6-pyruvoyl tetrahydropterin synthase H9L11_00680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_00680 PF00672 HAMP domain H9L11_00680 PF17200 Single Cache domain 2 H9L11_00685 PF00152 tRNA synthetases class II (D, K and N) H9L11_00685 PF01336 OB-fold nucleic acid binding domain H9L11_00695 PF00392 Bacterial regulatory proteins, gntR family H9L11_00695 PF00155 Aminotransferase class I and II H9L11_00710 PF00155 Aminotransferase class I and II H9L11_00730 PF00672 HAMP domain H9L11_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_00735 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_00745 PF00196 Bacterial regulatory proteins, luxR family H9L11_00745 PF00072 Response regulator receiver domain H9L11_00750 PF17200 Single Cache domain 2 H9L11_00750 PF07730 Histidine kinase H9L11_00755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9L11_00765 PF03480 Bacterial extracellular solute-binding protein, family 7 H9L11_00780 PF00753 Metallo-beta-lactamase superfamily H9L11_00785 PF05951 Bacterial protein of unknown function (DUF882) H9L11_00790 PF03734 L,D-transpeptidase catalytic domain H9L11_00790 PF01471 Putative peptidoglycan binding domain H9L11_00815 PF00925 GTP cyclohydrolase II H9L11_00825 PF03918 Cytochrome C biogenesis protein H9L11_00830 PF08534 Redoxin H9L11_00835 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9L11_00835 PF01578 Cytochrome C assembly protein H9L11_00840 PF03916 Polysulphide reductase, NrfD H9L11_00845 PF13247 4Fe-4S dicluster domain H9L11_00855 PF02335 Cytochrome c552 H9L11_00870 PF03989 DNA gyrase C-terminal domain, beta-propeller H9L11_00870 PF00521 DNA gyrase/topoisomerase IV, subunit A H9L11_00880 PF02867 Ribonucleotide reductase, barrel domain H9L11_00880 PF03477 ATP cone domain H9L11_00880 PF00317 Ribonucleotide reductase, all-alpha domain H9L11_00885 PF00268 Ribonucleotide reductase, small chain H9L11_00895 PF00994 Probable molybdopterin binding domain H9L11_00910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9L11_00915 PF16653 Saccharopine dehydrogenase C-terminal domain H9L11_00915 PF03435 Saccharopine dehydrogenase NADP binding domain H9L11_00920 PF00202 Aminotransferase class-III H9L11_00945 PF01066 CDP-alcohol phosphatidyltransferase H9L11_00950 PF02151 UvrB/uvrC motif H9L11_00950 PF08459 UvrC Helix-hairpin-helix N-terminal H9L11_00950 PF01541 GIY-YIG catalytic domain H9L11_00955 PF00072 Response regulator receiver domain H9L11_00955 PF00196 Bacterial regulatory proteins, luxR family H9L11_00960 PF03104 DNA polymerase family B, exonuclease domain H9L11_00960 PF00136 DNA polymerase family B H9L11_00970 PF08207 Elongation factor P (EF-P) KOW-like domain H9L11_00970 PF09285 Elongation factor P, C-terminal H9L11_00970 PF01132 Elongation factor P (EF-P) OB domain H9L11_00975 PF04269 Protein of unknown function, DUF440 H9L11_00980 PF00849 RNA pseudouridylate synthase H9L11_00980 PF01479 S4 domain H9L11_00990 PF01300 Telomere recombination H9L11_00995 PF02811 PHP domain H9L11_01000 PF08056 Tryptophan operon leader peptide H9L11_01005 PF00425 chorismate binding enzyme H9L11_01005 PF04715 Anthranilate synthase component I, N terminal region H9L11_01010 PF00117 Glutamine amidotransferase class-I H9L11_01015 PF00591 Glycosyl transferase family, a/b domain H9L11_01015 PF02885 Glycosyl transferase family, helical bundle domain H9L11_01020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H9L11_01020 PF00218 Indole-3-glycerol phosphate synthase H9L11_01025 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_01030 PF00290 Tryptophan synthase alpha chain H9L11_01035 PF00027 Cyclic nucleotide-binding domain H9L11_01035 PF13545 Crp-like helix-turn-helix domain H9L11_01040 PF13193 AMP-binding enzyme C-terminal domain H9L11_01040 PF00501 AMP-binding enzyme H9L11_01045 PF00375 Sodium:dicarboxylate symporter family H9L11_01050 PF17327 Acyl homoserine lactone synthase H9L11_01055 PF00072 Response regulator receiver domain H9L11_01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_01065 PF04279 Intracellular septation protein A H9L11_01070 PF03061 Thioesterase superfamily H9L11_01075 PF03795 YCII-related domain H9L11_01085 PF01717 Cobalamin-independent synthase, Catalytic domain H9L11_01085 PF08267 Cobalamin-independent synthase, N-terminal domain H9L11_01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_01090 PF03466 LysR substrate binding domain H9L11_01105 PF00563 EAL domain H9L11_01105 PF00990 Diguanylate cyclase, GGDEF domain H9L11_01105 PF08447 PAS fold H9L11_01105 PF08448 PAS fold H9L11_01110 PF11842 Domain of unknown function (DUF3362) H9L11_01110 PF04055 Radical SAM superfamily H9L11_01110 PF08497 Radical SAM N-terminal H9L11_01140 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H9L11_01145 PF00535 Glycosyl transferase family 2 H9L11_01150 PF00486 Transcriptional regulatory protein, C terminal H9L11_01150 PF00072 Response regulator receiver domain H9L11_01155 PF00672 HAMP domain H9L11_01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_01155 PF00512 His Kinase A (phospho-acceptor) domain H9L11_01175 PF03466 LysR substrate binding domain H9L11_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_01180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_01180 PF00529 HlyD membrane-fusion protein of T1SS H9L11_01190 PF01717 Cobalamin-independent synthase, Catalytic domain H9L11_01190 PF08267 Cobalamin-independent synthase, N-terminal domain H9L11_01210 PF02687 FtsX-like permease family H9L11_01210 PF00005 ABC transporter H9L11_01210 PF12704 MacB-like periplasmic core domain H9L11_01215 PF00005 ABC transporter H9L11_01215 PF02687 FtsX-like permease family H9L11_01215 PF12704 MacB-like periplasmic core domain H9L11_01220 PF02687 FtsX-like permease family H9L11_01220 PF12704 MacB-like periplasmic core domain H9L11_01220 PF00005 ABC transporter H9L11_01230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_01245 PF01938 TRAM domain H9L11_01245 PF05958 tRNA (Uracil-5-)-methyltransferase H9L11_01255 PF00085 Thioredoxin H9L11_01260 PF11412 Disulphide bond corrector protein DsbC H9L11_01260 PF02683 Cytochrome C biogenesis protein transmembrane region H9L11_01270 PF00196 Bacterial regulatory proteins, luxR family H9L11_01270 PF00072 Response regulator receiver domain H9L11_01275 PF00512 His Kinase A (phospho-acceptor) domain H9L11_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_01280 PF13247 4Fe-4S dicluster domain H9L11_01285 PF03916 Polysulphide reductase, NrfD H9L11_01290 PF00384 Molybdopterin oxidoreductase H9L11_01290 PF01568 Molydopterin dinucleotide binding domain H9L11_01290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9L11_01295 PF00034 Cytochrome c H9L11_01300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9L11_01305 PF04403 Paraquat-inducible protein A H9L11_01310 PF02470 MlaD protein H9L11_01330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_01335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H9L11_01340 PF18073 Rubredoxin metal binding domain H9L11_01345 PF06305 Lipopolysaccharide assembly protein A domain H9L11_01350 PF00216 Bacterial DNA-binding protein H9L11_01355 PF00575 S1 RNA binding domain H9L11_01360 PF02224 Cytidylate kinase H9L11_01365 PF01343 Peptidase family S49 H9L11_01365 PF08496 Peptidase family S49 N-terminal H9L11_01370 PF00106 short chain dehydrogenase H9L11_01385 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9L11_01385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9L11_01385 PF14579 Helix-hairpin-helix motif H9L11_01385 PF02811 PHP domain H9L11_01385 PF01336 OB-fold nucleic acid binding domain H9L11_01390 PF01584 CheW-like domain H9L11_01390 PF00072 Response regulator receiver domain H9L11_01395 PF00480 ROK family H9L11_01400 PF00224 Pyruvate kinase, barrel domain H9L11_01400 PF02887 Pyruvate kinase, alpha/beta domain H9L11_01405 PF01734 Patatin-like phospholipase H9L11_01420 PF00209 Sodium:neurotransmitter symporter family H9L11_01435 PF02378 Phosphotransferase system, EIIC H9L11_01435 PF00367 phosphotransferase system, EIIB H9L11_01440 PF01026 TatD related DNase H9L11_01445 PF09115 DNA polymerase III, delta subunit, C terminal H9L11_01450 PF02223 Thymidylate kinase H9L11_01455 PF02618 YceG-like family H9L11_01460 PF01063 Amino-transferase class IV H9L11_01465 PF00109 Beta-ketoacyl synthase, N-terminal domain H9L11_01465 PF02801 Beta-ketoacyl synthase, C-terminal domain H9L11_01470 PF00550 Phosphopantetheine attachment site H9L11_01480 PF00698 Acyl transferase domain H9L11_01485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9L11_01485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9L11_01490 PF02504 Fatty acid synthesis protein H9L11_01495 PF01783 Ribosomal L32p protein family H9L11_01500 PF02620 Large ribosomal RNA subunit accumulation protein YceD H9L11_01505 PF02545 Maf-like protein H9L11_01510 PF00849 RNA pseudouridylate synthase H9L11_01510 PF01479 S4 domain H9L11_01515 PF12111 Polyribonucleotide phosphorylase C terminal H9L11_01515 PF10150 Ribonuclease E/G family H9L11_01515 PF00575 S1 RNA binding domain H9L11_01520 PF01740 STAS domain H9L11_01520 PF00916 Sulfate permease family H9L11_01530 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9L11_01535 PF12557 Cob(I)alamin adenosyltransferase N terminal H9L11_01535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP H9L11_01545 PF00485 Phosphoribulokinase / Uridine kinase family H9L11_01550 PF10609 NUBPL iron-transfer P-loop NTPase H9L11_01555 PF09334 tRNA synthetases class I (M) H9L11_01555 PF01588 Putative tRNA binding domain H9L11_01575 PF00392 Bacterial regulatory proteins, gntR family H9L11_01575 PF07840 FadR C-terminal domain H9L11_01580 PF06450 Bacterial Na+/H+ antiporter B (NhaB) H9L11_01585 PF02600 Disulfide bond formation protein DsbB H9L11_01590 PF01043 SecA preprotein cross-linking domain H9L11_01590 PF07517 SecA DEAD-like domain H9L11_01590 PF07516 SecA Wing and Scaffold domain H9L11_01590 PF02810 SEC-C motif H9L11_01595 PF01207 Dihydrouridine synthase (Dus) H9L11_01600 PF17158 Membrane-associated sensor, integral membrane domain H9L11_01600 PF00990 Diguanylate cyclase, GGDEF domain H9L11_01605 PF00128 Alpha amylase, catalytic domain H9L11_01605 PF02903 Alpha amylase, N-terminal ig-like domain H9L11_01610 PF00005 ABC transporter H9L11_01615 PF02653 Branched-chain amino acid transport system / permease component H9L11_01625 PF04217 Protein of unknown function, DUF412 H9L11_01630 PF00871 Acetokinase family H9L11_01635 PF01515 Phosphate acetyl/butaryl transferase H9L11_01635 PF07085 DRTGG domain H9L11_01645 PF13409 Glutathione S-transferase, N-terminal domain H9L11_01650 PF00005 ABC transporter H9L11_01650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_01655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_01655 PF00005 ABC transporter H9L11_01660 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_01660 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_01665 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_01670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_01675 PF02391 MoaE protein H9L11_01680 PF02597 ThiS family H9L11_01685 PF01967 MoaC family H9L11_01690 PF00994 Probable molybdopterin binding domain H9L11_01695 PF04055 Radical SAM superfamily H9L11_01695 PF06463 Molybdenum Cofactor Synthesis C H9L11_01700 PF01933 Uncharacterised protein family UPF0052 H9L11_01705 PF01627 Hpt domain H9L11_01710 PF02954 Bacterial regulatory protein, Fis family H9L11_01710 PF00072 Response regulator receiver domain H9L11_01710 PF00158 Sigma-54 interaction domain H9L11_01715 PF17757 UvrB interaction domain H9L11_01715 PF12344 Ultra-violet resistance protein B H9L11_01715 PF02151 UvrB/uvrC motif H9L11_01715 PF04851 Type III restriction enzyme, res subunit H9L11_01715 PF00271 Helicase conserved C-terminal domain H9L11_01725 PF01228 Glycine radical H9L11_01725 PF02901 Pyruvate formate lyase-like H9L11_01730 PF02508 Rnf-Nqr subunit, membrane protein H9L11_01735 PF04060 Putative Fe-S cluster H9L11_01740 PF10531 SLBB domain H9L11_01740 PF13375 RnfC Barrel sandwich hybrid domain H9L11_01740 PF12838 4Fe-4S dicluster domain H9L11_01740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H9L11_01745 PF03116 NQR2, RnfD, RnfE family H9L11_01750 PF04205 FMN-binding domain H9L11_01755 PF02508 Rnf-Nqr subunit, membrane protein H9L11_01760 PF00730 HhH-GPD superfamily base excision DNA repair protein H9L11_01760 PF10576 Iron-sulfur binding domain of endonuclease III H9L11_01760 PF00633 Helix-hairpin-helix motif H9L11_01765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_01770 PF10952 Protein of unknown function (DUF2753) H9L11_01775 PF18393 MotY N-terminal domain H9L11_01775 PF00691 OmpA family H9L11_01780 PF00929 Exonuclease H9L11_01785 PF03553 Na+/H+ antiporter family H9L11_01785 PF13726 Na+-H+ antiporter family H9L11_01805 PF00462 Glutaredoxin H9L11_01810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9L11_01810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9L11_01825 PF00465 Iron-containing alcohol dehydrogenase H9L11_01825 PF00171 Aldehyde dehydrogenase family H9L11_01830 PF01914 MarC family integral membrane protein H9L11_01835 PF00027 Cyclic nucleotide-binding domain H9L11_01835 PF00520 Ion transport protein H9L11_01840 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9L11_01840 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9L11_01845 PF03553 Na+/H+ antiporter family H9L11_01860 PF04245 37-kD nucleoid-associated bacterial protein H9L11_01865 PF07208 Protein of unknown function (DUF1414) H9L11_01870 PF00884 Sulfatase H9L11_01870 PF11893 Domain of unknown function (DUF3413) H9L11_01880 PF00850 Histone deacetylase domain H9L11_01885 PF00106 short chain dehydrogenase H9L11_01895 PF01131 DNA topoisomerase H9L11_01895 PF01751 Toprim domain H9L11_01900 PF00881 Nitroreductase family H9L11_01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_01910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9L11_01915 PF01343 Peptidase family S49 H9L11_01920 PF00710 Asparaginase, N-terminal H9L11_01920 PF17763 Glutaminase/Asparaginase C-terminal domain H9L11_01925 PF07023 Protein of unknown function (DUF1315) H9L11_01935 PF01641 SelR domain H9L11_01940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9L11_01940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9L11_01945 PF01263 Aldose 1-epimerase H9L11_01950 PF02743 Cache domain H9L11_01950 PF00672 HAMP domain H9L11_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_01955 PF13847 Methyltransferase domain H9L11_01970 PF00245 Alkaline phosphatase H9L11_01980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_01985 PF03992 Antibiotic biosynthesis monooxygenase H9L11_01990 PF05552 Conserved TM helix H9L11_01990 PF00924 Mechanosensitive ion channel H9L11_01995 PF03692 Putative zinc- or iron-chelating domain H9L11_02000 PF04226 Transglycosylase associated protein H9L11_02005 PF03692 Putative zinc- or iron-chelating domain H9L11_02010 PF00230 Major intrinsic protein H9L11_02015 PF13662 Toprim domain H9L11_02015 PF02132 RecR protein H9L11_02020 PF02575 YbaB/EbfC DNA-binding family H9L11_02025 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H9L11_02025 PF12169 DNA polymerase III subunits gamma and tau domain III H9L11_02025 PF12170 DNA polymerase III tau subunit V interacting with alpha H9L11_02030 PF00156 Phosphoribosyl transferase domain H9L11_02035 PF04304 Protein of unknown function (DUF454) H9L11_02040 PF00072 Response regulator receiver domain H9L11_02045 PF03466 LysR substrate binding domain H9L11_02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_02050 PF00156 Phosphoribosyl transferase domain H9L11_02055 PF02674 Colicin V production protein H9L11_02060 PF05036 Sporulation related domain H9L11_02065 PF02875 Mur ligase family, glutamate ligase domain H9L11_02065 PF08245 Mur ligase middle domain H9L11_02070 PF01039 Carboxyl transferase domain H9L11_02070 PF17848 Acetyl-coA carboxylase zinc finger domain H9L11_02075 PF01416 tRNA pseudouridine synthase H9L11_02085 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9L11_02085 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9L11_02090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9L11_02090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9L11_02090 PF11890 Domain of unknown function (DUF3410) H9L11_02095 PF00109 Beta-ketoacyl synthase, N-terminal domain H9L11_02095 PF02801 Beta-ketoacyl synthase, C-terminal domain H9L11_02100 PF01266 FAD dependent oxidoreductase H9L11_02100 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H9L11_02105 PF03358 NADPH-dependent FMN reductase H9L11_02110 PF08891 YfcL protein H9L11_02115 PF04315 Elongation factor P hydroxylase H9L11_02120 PF03458 UPF0126 domain H9L11_02125 PF01264 Chorismate synthase H9L11_02130 PF05175 Methyltransferase small domain H9L11_02135 PF01713 Smr domain H9L11_02140 PF00300 Histidine phosphatase superfamily (branch 1) H9L11_02145 PF05193 Peptidase M16 inactive domain H9L11_02145 PF16187 Middle or third domain of peptidase_M16 H9L11_02145 PF00675 Insulinase (Peptidase family M16) H9L11_02155 PF00378 Enoyl-CoA hydratase/isomerase H9L11_02155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9L11_02155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9L11_02160 PF02803 Thiolase, C-terminal domain H9L11_02160 PF00108 Thiolase, N-terminal domain H9L11_02165 PF08281 Sigma-70, region 4 H9L11_02165 PF04542 Sigma-70 region 2 H9L11_02175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9L11_02180 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9L11_02190 PF04333 MlaA lipoprotein H9L11_02195 PF03918 Cytochrome C biogenesis protein H9L11_02200 PF03918 Cytochrome C biogenesis protein H9L11_02205 PF08534 Redoxin H9L11_02210 PF01578 Cytochrome C assembly protein H9L11_02210 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9L11_02215 PF03100 CcmE H9L11_02220 PF04995 Heme exporter protein D (CcmD) H9L11_02225 PF01578 Cytochrome C assembly protein H9L11_02230 PF03379 CcmB protein H9L11_02235 PF00005 ABC transporter H9L11_02245 PF01584 CheW-like domain H9L11_02255 PF13614 AAA domain H9L11_02260 PF00072 Response regulator receiver domain H9L11_02260 PF01339 CheB methylesterase H9L11_02265 PF01584 CheW-like domain H9L11_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_02265 PF01627 Hpt domain H9L11_02265 PF00072 Response regulator receiver domain H9L11_02265 PF02895 Signal transducing histidine kinase, homodimeric domain H9L11_02270 PF04344 Chemotaxis phosphatase, CheZ H9L11_02275 PF00072 Response regulator receiver domain H9L11_02280 PF04542 Sigma-70 region 2 H9L11_02280 PF04545 Sigma-70, region 4 H9L11_02280 PF04539 Sigma-70 region 3 H9L11_02285 PF10609 NUBPL iron-transfer P-loop NTPase H9L11_02290 PF00448 SRP54-type protein, GTPase domain H9L11_02295 PF00771 FHIPEP family H9L11_02300 PF01312 FlhB HrpN YscU SpaS Family H9L11_02305 PF01311 Bacterial export proteins, family 1 H9L11_02310 PF01313 Bacterial export proteins, family 3 H9L11_02315 PF00813 FliP family H9L11_02320 PF04347 Flagellar biosynthesis protein, FliO H9L11_02325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9L11_02330 PF02154 Flagellar motor switch protein FliM H9L11_02330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9L11_02355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_02355 PF18269 T3SS EscN ATPase C-terminal domain H9L11_02365 PF14842 FliG N-terminal domain H9L11_02365 PF01706 FliG C-terminal domain H9L11_02365 PF14841 FliG middle domain H9L11_02370 PF08345 Flagellar M-ring protein C-terminal H9L11_02370 PF01514 Secretory protein of YscJ/FliF family H9L11_02375 PF02049 Flagellar hook-basal body complex protein FliE H9L11_02380 PF02954 Bacterial regulatory protein, Fis family H9L11_02380 PF00158 Sigma-54 interaction domain H9L11_02380 PF00072 Response regulator receiver domain H9L11_02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_02385 PF13188 PAS domain H9L11_02385 PF00512 His Kinase A (phospho-acceptor) domain H9L11_02390 PF06490 Flagellar regulatory protein FleQ H9L11_02390 PF00158 Sigma-54 interaction domain H9L11_02390 PF02954 Bacterial regulatory protein, Fis family H9L11_02395 PF02561 Flagellar protein FliS H9L11_02405 PF02465 Flagellar hook-associated protein 2 N-terminus H9L11_02405 PF07195 Flagellar hook-associated protein 2 C-terminus H9L11_02405 PF07196 Flagellin hook IN motif H9L11_02410 PF03646 FlaG protein H9L11_02415 PF00669 Bacterial flagellin N-terminal helical region H9L11_02415 PF07196 Flagellin hook IN motif H9L11_02415 PF00700 Bacterial flagellin C-terminal helical region H9L11_02420 PF00669 Bacterial flagellin N-terminal helical region H9L11_02420 PF00700 Bacterial flagellin C-terminal helical region H9L11_02420 PF07196 Flagellin hook IN motif H9L11_02425 PF00700 Bacterial flagellin C-terminal helical region H9L11_02425 PF00669 Bacterial flagellin N-terminal helical region H9L11_02425 PF07196 Flagellin hook IN motif H9L11_02430 PF04261 Dyp-type peroxidase family H9L11_02435 PF11143 Protein of unknown function (DUF2919) H9L11_02455 PF03960 ArsC family H9L11_02460 PF07687 Peptidase dimerisation domain H9L11_02460 PF01546 Peptidase family M20/M25/M40 H9L11_02475 PF06804 NlpB/DapX lipoprotein H9L11_02480 PF00701 Dihydrodipicolinate synthetase family H9L11_02490 PF00578 AhpC/TSA family H9L11_02495 PF01594 AI-2E family transporter H9L11_02505 PF13181 Tetratricopeptide repeat H9L11_02505 PF01435 Peptidase family M48 H9L11_02510 PF03960 ArsC family H9L11_02515 PF03358 NADPH-dependent FMN reductase H9L11_02530 PF00860 Permease family H9L11_02545 PF02769 AIR synthase related protein, C-terminal domain H9L11_02545 PF00586 AIR synthase related protein, N-terminal domain H9L11_02550 PF00551 Formyl transferase H9L11_02560 PF13230 Glutamine amidotransferases class-II H9L11_02565 PF13580 SIS domain H9L11_02570 PF09317 Domain of unknown function (DUF1974) H9L11_02570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_02570 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_02570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_02575 PF01740 STAS domain H9L11_02575 PF00916 Sulfate permease family H9L11_02600 PF00929 Exonuclease H9L11_02605 PF00075 RNase H H9L11_02610 PF08241 Methyltransferase domain H9L11_02615 PF00753 Metallo-beta-lactamase superfamily H9L11_02615 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9L11_02620 PF01464 Transglycosylase SLT domain H9L11_02620 PF01476 LysM domain H9L11_02630 PF03372 Endonuclease/Exonuclease/phosphatase family H9L11_02635 PF00543 Nitrogen regulatory protein P-II H9L11_02640 PF00034 Cytochrome c H9L11_02645 PF01171 PP-loop family H9L11_02645 PF09179 TilS substrate binding domain H9L11_02645 PF11734 TilS substrate C-terminal domain H9L11_02650 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H9L11_02655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9L11_02655 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9L11_02655 PF14579 Helix-hairpin-helix motif H9L11_02655 PF01336 OB-fold nucleic acid binding domain H9L11_02655 PF02811 PHP domain H9L11_02660 PF01351 Ribonuclease HII H9L11_02665 PF02684 Lipid-A-disaccharide synthetase H9L11_02670 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H9L11_02670 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_02675 PF07977 FabA-like domain H9L11_02680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H9L11_02680 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_02685 PF03938 Outer membrane protein (OmpH-like) H9L11_02690 PF01103 Surface antigen H9L11_02690 PF07244 Surface antigen variable number repeat H9L11_02695 PF17820 PDZ domain H9L11_02695 PF02163 Peptidase family M50 H9L11_02700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H9L11_02700 PF13288 DXP reductoisomerase C-terminal domain H9L11_02700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H9L11_02710 PF01255 Putative undecaprenyl diphosphate synthase H9L11_02715 PF01765 Ribosome recycling factor H9L11_02720 PF00696 Amino acid kinase family H9L11_02725 PF00889 Elongation factor TS H9L11_02730 PF00318 Ribosomal protein S2 H9L11_02735 PF00557 Metallopeptidase family M24 H9L11_02740 PF01842 ACT domain H9L11_02740 PF08335 GlnD PII-uridylyltransferase H9L11_02740 PF01966 HD domain H9L11_02740 PF01909 Nucleotidyltransferase domain H9L11_02745 PF11944 Protein of unknown function (DUF3461) H9L11_02750 PF00849 RNA pseudouridylate synthase H9L11_02755 PF04287 tRNA pseudouridine synthase C H9L11_02755 PF00849 RNA pseudouridylate synthase H9L11_02780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H9L11_02785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9L11_02785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9L11_02790 PF01370 NAD dependent epimerase/dehydratase family H9L11_02815 PF03806 AbgT putative transporter family H9L11_02820 PF00444 Ribosomal protein L36 H9L11_02825 PF01197 Ribosomal protein L31 H9L11_02830 PF18389 TrmO C-terminal domain H9L11_02830 PF01980 tRNA-methyltransferase O H9L11_02835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9L11_02835 PF03129 Anticodon binding domain H9L11_02835 PF04073 Aminoacyl-tRNA editing domain H9L11_02845 PF06786 Uncharacterised protein family (UPF0253) H9L11_02855 PF00209 Sodium:neurotransmitter symporter family H9L11_02860 PF00704 Glycosyl hydrolases family 18 H9L11_02860 PF06483 Chitinase C H9L11_02870 PF01272 Transcription elongation factor, GreA/GreB, C-term H9L11_02870 PF03449 Transcription elongation factor, N-terminal H9L11_02875 PF00270 DEAD/DEAH box helicase H9L11_02875 PF09382 RQC domain H9L11_02875 PF16124 RecQ zinc-binding H9L11_02875 PF00271 Helicase conserved C-terminal domain H9L11_02875 PF00570 HRDC domain H9L11_02880 PF00817 impB/mucB/samB family H9L11_02880 PF11799 impB/mucB/samB family C-terminal domain H9L11_02880 PF11798 IMS family HHH motif H9L11_02890 PF00990 Diguanylate cyclase, GGDEF domain H9L11_02890 PF00072 Response regulator receiver domain H9L11_02900 PF02424 ApbE family H9L11_02905 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_02905 PF00970 Oxidoreductase FAD-binding domain H9L11_02905 PF00175 Oxidoreductase NAD-binding domain H9L11_02910 PF02508 Rnf-Nqr subunit, membrane protein H9L11_02915 PF02508 Rnf-Nqr subunit, membrane protein H9L11_02920 PF04205 FMN-binding domain H9L11_02925 PF03116 NQR2, RnfD, RnfE family H9L11_02930 PF11973 NQRA C-terminal domain H9L11_02930 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) H9L11_02935 PF01722 BolA-like protein H9L11_02940 PF05175 Methyltransferase small domain H9L11_02945 PF03923 Uncharacterized lipoprotein H9L11_02945 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9L11_02950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9L11_02955 PF07690 Major Facilitator Superfamily H9L11_02965 PF04545 Sigma-70, region 4 H9L11_02965 PF04542 Sigma-70 region 2 H9L11_02980 PF03502 Nucleoside-specific channel-forming protein, Tsx H9L11_02985 PF08546 Ketopantoate reductase PanE/ApbA C terminal H9L11_02985 PF02558 Ketopantoate reductase PanE/ApbA H9L11_02990 PF01965 DJ-1/PfpI family H9L11_02995 PF00266 Aminotransferase class-V H9L11_03000 PF17158 Membrane-associated sensor, integral membrane domain H9L11_03000 PF00990 Diguanylate cyclase, GGDEF domain H9L11_03005 PF02657 Fe-S metabolism associated domain H9L11_03010 PF00899 ThiF family H9L11_03015 PF06725 3D domain H9L11_03015 PF03562 MltA specific insert domain H9L11_03025 PF00583 Acetyltransferase (GNAT) family H9L11_03025 PF00696 Amino acid kinase family H9L11_03050 PF13538 UvrD-like helicase C-terminal domain H9L11_03055 PF00580 UvrD/REP helicase N-terminal domain H9L11_03055 PF13361 UvrD-like helicase C-terminal domain H9L11_03055 PF12705 PD-(D/E)XK nuclease superfamily H9L11_03060 PF17946 RecC C-terminal domain H9L11_03065 PF11893 Domain of unknown function (DUF3413) H9L11_03065 PF00884 Sulfatase H9L11_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_03075 PF03466 LysR substrate binding domain H9L11_03080 PF07130 YebG protein H9L11_03095 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H9L11_03095 PF14602 Hexapeptide repeat of succinyl-transferase H9L11_03100 PF03009 Glycerophosphoryl diester phosphodiesterase family H9L11_03105 PF07690 Major Facilitator Superfamily H9L11_03110 PF00230 Major intrinsic protein H9L11_03115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9L11_03115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9L11_03120 PF00455 DeoR C terminal sensor domain H9L11_03120 PF08220 DeoR-like helix-turn-helix domain H9L11_03125 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H9L11_03125 PF01266 FAD dependent oxidoreductase H9L11_03130 PF01544 CorA-like Mg2+ transporter protein H9L11_03150 PF00356 Bacterial regulatory proteins, lacI family H9L11_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_03155 PF03466 LysR substrate binding domain H9L11_03165 PF00196 Bacterial regulatory proteins, luxR family H9L11_03195 PF00501 AMP-binding enzyme H9L11_03205 PF03466 LysR substrate binding domain H9L11_03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_03210 PF03764 Elongation factor G, domain IV H9L11_03210 PF14492 Elongation Factor G, domain II H9L11_03210 PF03144 Elongation factor Tu domain 2 H9L11_03210 PF00679 Elongation factor G C-terminus H9L11_03210 PF00009 Elongation factor Tu GTP binding domain H9L11_03215 PF18073 Rubredoxin metal binding domain H9L11_03225 PF18429 Domain of unknown function (DUF5609) H9L11_03235 PF01048 Phosphorylase superfamily H9L11_03240 PF01676 Metalloenzyme superfamily H9L11_03245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H9L11_03245 PF00591 Glycosyl transferase family, a/b domain H9L11_03245 PF02885 Glycosyl transferase family, helical bundle domain H9L11_03250 PF01791 DeoC/LacD family aldolase H9L11_03255 PF07670 Nucleoside recognition H9L11_03255 PF07662 Na+ dependent nucleoside transporter C-terminus H9L11_03255 PF01773 Na+ dependent nucleoside transporter N-terminus H9L11_03260 PF01026 TatD related DNase H9L11_03270 PF00009 Elongation factor Tu GTP binding domain H9L11_03270 PF03144 Elongation factor Tu domain 2 H9L11_03270 PF16658 Class II release factor RF3, C-terminal domain H9L11_03290 PF13508 Acetyltransferase (GNAT) domain H9L11_03295 PF02036 SCP-2 sterol transfer family H9L11_03300 PF00990 Diguanylate cyclase, GGDEF domain H9L11_03300 PF03707 Bacterial signalling protein N terminal repeat H9L11_03300 PF00563 EAL domain H9L11_03305 PF01136 Peptidase family U32 H9L11_03310 PF01136 Peptidase family U32 H9L11_03315 PF01554 MatE H9L11_03325 PF13181 Tetratricopeptide repeat H9L11_03325 PF07719 Tetratricopeptide repeat H9L11_03330 PF00013 KH domain H9L11_03330 PF01138 3' exoribonuclease family, domain 1 H9L11_03330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H9L11_03330 PF00575 S1 RNA binding domain H9L11_03330 PF03725 3' exoribonuclease family, domain 2 H9L11_03335 PF00312 Ribosomal protein S15 H9L11_03340 PF01509 TruB family pseudouridylate synthase (N terminal domain) H9L11_03340 PF16198 tRNA pseudouridylate synthase B C-terminal domain H9L11_03340 PF09157 Pseudouridine synthase II TruB, C-terminal H9L11_03345 PF02033 Ribosome-binding factor A H9L11_03350 PF08364 Bacterial translation initiation factor IF-2 associated region H9L11_03350 PF00009 Elongation factor Tu GTP binding domain H9L11_03350 PF11987 Translation-initiation factor 2 H9L11_03350 PF04760 Translation initiation factor IF-2, N-terminal region H9L11_03355 PF08529 NusA N-terminal domain H9L11_03355 PF00575 S1 RNA binding domain H9L11_03355 PF13184 NusA-like KH domain H9L11_03360 PF02576 RimP N-terminal domain H9L11_03360 PF17384 RimP C-terminal SH3 domain H9L11_03375 PF03840 Preprotein translocase SecG subunit H9L11_03380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9L11_03380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9L11_03380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9L11_03380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9L11_03385 PF00809 Pterin binding enzyme H9L11_03390 PF17862 AAA+ lid domain H9L11_03390 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_03390 PF06480 FtsH Extracellular H9L11_03390 PF01434 Peptidase family M41 H9L11_03395 PF01728 FtsJ-like methyltransferase H9L11_03400 PF01985 CRS1 / YhbY (CRM) domain H9L11_03405 PF01272 Transcription elongation factor, GreA/GreB, C-term H9L11_03405 PF03449 Transcription elongation factor, N-terminal H9L11_03410 PF13609 Gram-negative porin H9L11_03415 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H9L11_03425 PF00579 tRNA synthetases class I (W and Y) H9L11_03430 PF08525 Opacity-associated protein A N-terminal motif H9L11_03430 PF01476 LysM domain H9L11_03430 PF01551 Peptidase family M23 H9L11_03435 PF00873 AcrB/AcrD/AcrF family H9L11_03445 PF01521 Iron-sulphur cluster biosynthesis H9L11_03450 PF00202 Aminotransferase class-III H9L11_03455 PF01594 AI-2E family transporter H9L11_03460 PF08468 Methyltransferase small domain N-terminal H9L11_03460 PF05175 Methyltransferase small domain H9L11_03465 PF09308 LuxQ, periplasmic H9L11_03465 PF00512 His Kinase A (phospho-acceptor) domain H9L11_03465 PF00072 Response regulator receiver domain H9L11_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_03470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_03475 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_03480 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_03480 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_03485 PF00005 ABC transporter H9L11_03485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_03490 PF00005 ABC transporter H9L11_03490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_03500 PF01869 BadF/BadG/BcrA/BcrD ATPase family H9L11_03505 PF00728 Glycosyl hydrolase family 20, catalytic domain H9L11_03505 PF02838 Glycosyl hydrolase family 20, domain 2 H9L11_03510 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H9L11_03510 PF06165 Glycosyltransferase family 36 H9L11_03515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9L11_03515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9L11_03515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9L11_03515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9L11_03520 PF00005 ABC transporter H9L11_03520 PF08402 TOBE domain H9L11_03530 PF13416 Bacterial extracellular solute-binding protein H9L11_03535 PF00909 Ammonium Transporter Family H9L11_03540 PF00543 Nitrogen regulatory protein P-II H9L11_03545 PF06062 Uncharacterised protein family (UPF0231) H9L11_03550 PF00330 Aconitase family (aconitate hydratase) H9L11_03550 PF06434 Aconitate hydratase 2 N-terminus H9L11_03550 PF11791 Aconitate B N-terminal domain H9L11_03555 PF01734 Patatin-like phospholipase H9L11_03560 PF00912 Transglycosylase H9L11_03560 PF00905 Penicillin binding protein transpeptidase domain H9L11_03560 PF14814 Bifunctional transglycosylase second domain H9L11_03565 PF08482 ATP-dependent helicase C-terminal H9L11_03565 PF00271 Helicase conserved C-terminal domain H9L11_03565 PF04408 Helicase associated domain (HA2) H9L11_03565 PF00270 DEAD/DEAH box helicase H9L11_03570 PF17746 SfsA N-terminal OB domain H9L11_03570 PF03749 Sugar fermentation stimulation protein RE domain H9L11_03575 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9L11_03580 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9L11_03585 PF12626 Polymerase A arginine-rich C-terminus H9L11_03585 PF12627 Probable RNA and SrmB- binding site of polymerase A H9L11_03585 PF01743 Poly A polymerase head domain H9L11_03590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9L11_03595 PF02548 Ketopantoate hydroxymethyltransferase H9L11_03600 PF02569 Pantoate-beta-alanine ligase H9L11_03605 PF03279 Bacterial lipid A biosynthesis acyltransferase H9L11_03610 PF01061 ABC-2 type transporter H9L11_03615 PF00005 ABC transporter H9L11_03620 PF01740 STAS domain H9L11_03620 PF00916 Sulfate permease family H9L11_03625 PF00484 Carbonic anhydrase H9L11_03630 PF00156 Phosphoribosyl transferase domain H9L11_03635 PF00440 Bacterial regulatory proteins, tetR family H9L11_03640 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_03640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9L11_03645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9L11_03645 PF00364 Biotin-requiring enzyme H9L11_03645 PF02817 e3 binding domain H9L11_03650 PF00456 Transketolase, thiamine diphosphate binding domain H9L11_03650 PF17831 Pyruvate dehydrogenase E1 component middle domain H9L11_03655 PF07729 FCD domain H9L11_03655 PF00392 Bacterial regulatory proteins, gntR family H9L11_03660 PF01510 N-acetylmuramoyl-L-alanine amidase H9L11_03665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H9L11_03665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H9L11_03670 PF07963 Prokaryotic N-terminal methylation motif H9L11_03670 PF00114 Pilin (bacterial filament) H9L11_03675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9L11_03675 PF00437 Type II/IV secretion system protein H9L11_03680 PF00482 Type II secretion system (T2SS), protein F H9L11_03685 PF01478 Type IV leader peptidase family H9L11_03685 PF06750 Bacterial Peptidase A24 N-terminal domain H9L11_03690 PF01121 Dephospho-CoA kinase H9L11_03695 PF07072 Cell division protein H9L11_03700 PF03884 DNA gyrase inhibitor YacG H9L11_03705 PF01245 Ribosomal protein L19 H9L11_03710 PF01746 tRNA (Guanine-1)-methyltransferase H9L11_03715 PF05239 PRC-barrel domain H9L11_03715 PF01782 RimM N-terminal domain H9L11_03720 PF00886 Ribosomal protein S16 H9L11_03725 PF00448 SRP54-type protein, GTPase domain H9L11_03725 PF02978 Signal peptide binding domain H9L11_03725 PF02881 SRP54-type protein, helical bundle domain H9L11_03730 PF01578 Cytochrome C assembly protein H9L11_03735 PF01595 Cyclin M transmembrane N-terminal domain H9L11_03735 PF03471 Transporter associated domain H9L11_03735 PF00571 CBS domain H9L11_03740 PF02664 S-Ribosylhomocysteinase (LuxS) H9L11_03750 PF04262 Glutamate-cysteine ligase H9L11_03755 PF05193 Peptidase M16 inactive domain H9L11_03755 PF00675 Insulinase (Peptidase family M16) H9L11_03760 PF09335 SNARE associated Golgi protein H9L11_03765 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_03765 PF00107 Zinc-binding dehydrogenase H9L11_03770 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit H9L11_03775 PF00682 HMGL-like H9L11_03775 PF02436 Conserved carboxylase domain H9L11_03775 PF00364 Biotin-requiring enzyme H9L11_03780 PF04277 Oxaloacetate decarboxylase, gamma chain H9L11_03835 PF02599 Global regulator protein family H9L11_03840 PF13840 ACT domain H9L11_03840 PF01842 ACT domain H9L11_03840 PF00696 Amino acid kinase family H9L11_03845 PF01411 tRNA synthetases class II (A) H9L11_03845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9L11_03845 PF02272 DHHA1 domain H9L11_03850 PF02631 RecX family H9L11_03855 PF00154 recA bacterial DNA recombination protein H9L11_03860 PF02464 Competence-damaged protein H9L11_03865 PF07196 Flagellin hook IN motif H9L11_03865 PF00700 Bacterial flagellin C-terminal helical region H9L11_03865 PF00669 Bacterial flagellin N-terminal helical region H9L11_03890 PF02796 Helix-turn-helix domain of resolvase H9L11_03890 PF00665 Integrase core domain H9L11_03895 PF01695 IstB-like ATP binding protein H9L11_03910 PF01624 MutS domain I H9L11_03910 PF05192 MutS domain III H9L11_03910 PF05188 MutS domain II H9L11_03910 PF05190 MutS family domain IV H9L11_03910 PF00488 MutS domain V H9L11_03915 PF04539 Sigma-70 region 3 H9L11_03915 PF04545 Sigma-70, region 4 H9L11_03915 PF00140 Sigma-70 factor, region 1.2 H9L11_03915 PF04542 Sigma-70 region 2 H9L11_03920 PF01476 LysM domain H9L11_03920 PF01551 Peptidase family M23 H9L11_03930 PF01975 Survival protein SurE H9L11_03935 PF01142 tRNA pseudouridine synthase D (TruD) H9L11_03940 PF02542 YgbB family H9L11_03945 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9L11_03950 PF04977 Septum formation initiator H9L11_03955 PF00113 Enolase, C-terminal TIM barrel domain H9L11_03955 PF03952 Enolase, N-terminal domain H9L11_03960 PF06418 CTP synthase N-terminus H9L11_03960 PF00117 Glutamine amidotransferase class-I H9L11_03965 PF03819 MazG nucleotide pyrophosphohydrolase domain H9L11_03970 PF13291 ACT domain H9L11_03970 PF04607 Region found in RelA / SpoT proteins H9L11_03970 PF02824 TGS domain H9L11_03975 PF05958 tRNA (Uracil-5-)-methyltransferase H9L11_03975 PF01938 TRAM domain H9L11_03980 PF01627 Hpt domain H9L11_03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_03980 PF00672 HAMP domain H9L11_03980 PF00072 Response regulator receiver domain H9L11_03980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9L11_03980 PF00512 His Kinase A (phospho-acceptor) domain H9L11_03985 PF01648 4'-phosphopantetheinyl transferase superfamily H9L11_03990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H9L11_03995 PF11967 Recombination protein O N terminal H9L11_03995 PF02565 Recombination protein O C terminal H9L11_04000 PF01926 50S ribosome-binding GTPase H9L11_04000 PF07650 KH domain H9L11_04005 PF14622 Ribonuclease-III-like H9L11_04005 PF00035 Double-stranded RNA binding motif H9L11_04010 PF10502 Signal peptidase, peptidase S26 H9L11_04015 PF00679 Elongation factor G C-terminus H9L11_04015 PF06421 GTP-binding protein LepA C-terminus H9L11_04015 PF03144 Elongation factor Tu domain 2 H9L11_04015 PF00009 Elongation factor Tu GTP binding domain H9L11_04025 PF03888 MucB/RseB N-terminal domain H9L11_04025 PF17188 MucB/RseB C-terminal domain H9L11_04030 PF03872 Anti sigma-E protein RseA, N-terminal domain H9L11_04030 PF03873 Anti sigma-E protein RseA, C-terminal domain H9L11_04035 PF08281 Sigma-70, region 4 H9L11_04035 PF04542 Sigma-70 region 2 H9L11_04040 PF00890 FAD binding domain H9L11_04040 PF02910 Fumarate reductase flavoprotein C-term H9L11_04050 PF03937 Flavinator of succinate dehydrogenase H9L11_04070 PF01494 FAD binding domain H9L11_04075 PF01494 FAD binding domain H9L11_04080 PF03695 Uncharacterised protein family (UPF0149) H9L11_04085 PF05164 Cell division protein ZapA H9L11_04095 PF01812 5-formyltetrahydrofolate cyclo-ligase family H9L11_04100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H9L11_04105 PF01842 ACT domain H9L11_04105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9L11_04105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9L11_04110 PF04402 Protein of unknown function (DUF541) H9L11_04115 PF03466 LysR substrate binding domain H9L11_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_04120 PF01810 LysE type translocator H9L11_04130 PF05552 Conserved TM helix H9L11_04130 PF00924 Mechanosensitive ion channel H9L11_04135 PF01116 Fructose-bisphosphate aldolase class-II H9L11_04140 PF00162 Phosphoglycerate kinase H9L11_04145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9L11_04145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9L11_04150 PF07715 TonB-dependent Receptor Plug Domain H9L11_04150 PF00593 TonB dependent receptor H9L11_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_04155 PF03466 LysR substrate binding domain H9L11_04160 PF00456 Transketolase, thiamine diphosphate binding domain H9L11_04160 PF02779 Transketolase, pyrimidine binding domain H9L11_04160 PF02780 Transketolase, C-terminal domain H9L11_04165 PF00438 S-adenosylmethionine synthetase, N-terminal domain H9L11_04165 PF02772 S-adenosylmethionine synthetase, central domain H9L11_04165 PF02773 S-adenosylmethionine synthetase, C-terminal domain H9L11_04175 PF17283 SprT-like zinc ribbon domain H9L11_04175 PF10263 SprT-like family H9L11_04180 PF04231 Endonuclease I H9L11_04185 PF04452 RNA methyltransferase H9L11_04190 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H9L11_04190 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H9L11_04195 PF02622 Uncharacterized ACR, COG1678 H9L11_04200 PF03652 Holliday junction resolvase H9L11_04205 PF00437 Type II/IV secretion system protein H9L11_04210 PF00437 Type II/IV secretion system protein H9L11_04215 PF01168 Alanine racemase, N-terminal domain H9L11_04220 PF14748 Pyrroline-5-carboxylate reductase dimerisation H9L11_04220 PF03807 NADP oxidoreductase coenzyme F420-dependent H9L11_04225 PF02325 YGGT family H9L11_04230 PF02594 Uncharacterised ACR, YggU family COG1872 H9L11_04240 PF01725 Ham1 family H9L11_04245 PF06969 HemN C-terminal domain H9L11_04245 PF04055 Radical SAM superfamily H9L11_04250 PF04960 Glutaminase H9L11_04255 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9L11_04260 PF02390 Putative methyltransferase H9L11_04265 PF14815 NUDIX domain H9L11_04265 PF00633 Helix-hairpin-helix motif H9L11_04265 PF00730 HhH-GPD superfamily base excision DNA repair protein H9L11_04270 PF04362 Bacterial Fe(2+) trafficking H9L11_04275 PF01464 Transglycosylase SLT domain H9L11_04275 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9L11_04315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_04315 PF17200 Single Cache domain 2 H9L11_04315 PF00672 HAMP domain H9L11_04345 PF00171 Aldehyde dehydrogenase family H9L11_04395 PF00356 Bacterial regulatory proteins, lacI family H9L11_04400 PF04794 YdjC-like protein H9L11_04405 PF02056 Family 4 glycosyl hydrolase H9L11_04405 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9L11_04410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H9L11_04415 PF02378 Phosphotransferase system, EIIC H9L11_04420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9L11_04425 PF01522 Polysaccharide deacetylase H9L11_04440 PF10011 Predicted membrane protein (DUF2254) H9L11_04450 PF03739 Lipopolysaccharide export system permease LptF/LptG H9L11_04455 PF03739 Lipopolysaccharide export system permease LptF/LptG H9L11_04460 PF02789 Cytosol aminopeptidase family, N-terminal domain H9L11_04460 PF00883 Cytosol aminopeptidase family, catalytic domain H9L11_04465 PF04364 DNA polymerase III chi subunit, HolC H9L11_04470 PF10458 Valyl tRNA synthetase tRNA binding arm H9L11_04470 PF00133 tRNA synthetases class I (I, L, M and V) H9L11_04470 PF08264 Anticodon-binding domain of tRNA H9L11_04480 PF00583 Acetyltransferase (GNAT) family H9L11_04490 PF06877 Regulator of ribonuclease activity B H9L11_04500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9L11_04500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9L11_04510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9L11_04510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9L11_04515 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain H9L11_04515 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain H9L11_04520 PF01042 Endoribonuclease L-PSP H9L11_04525 PF01553 Acyltransferase H9L11_04530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9L11_04535 PF01722 BolA-like protein H9L11_04545 PF05494 MlaC protein H9L11_04550 PF02470 MlaD protein H9L11_04555 PF02405 Permease MlaE H9L11_04560 PF00005 ABC transporter H9L11_04565 PF01699 Sodium/calcium exchanger protein H9L11_04570 PF00571 CBS domain H9L11_04570 PF01380 SIS domain H9L11_04580 PF03968 OstA-like protein H9L11_04585 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9L11_04585 PF00005 ABC transporter H9L11_04590 PF04552 Sigma-54, DNA binding domain H9L11_04590 PF04963 Sigma-54 factor, core binding domain H9L11_04590 PF00309 Sigma-54 factor, Activator interacting domain (AID) H9L11_04595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9L11_04600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9L11_04605 PF03668 P-loop ATPase protein family H9L11_04610 PF00381 PTS HPr component phosphorylation site H9L11_04615 PF00571 CBS domain H9L11_04615 PF01769 Divalent cation transporter H9L11_04615 PF03448 MgtE intracellular N domain H9L11_04620 PF01523 Putative modulator of DNA gyrase H9L11_04625 PF04751 Protein of unknown function (DUF615) H9L11_04630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9L11_04630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9L11_04635 PF00849 RNA pseudouridylate synthase H9L11_04645 PF12137 RNA polymerase recycling family C-terminal H9L11_04645 PF18339 RapA N-terminal Tudor like domain 1 H9L11_04645 PF00271 Helicase conserved C-terminal domain H9L11_04645 PF00176 SNF2 family N-terminal domain H9L11_04645 PF18337 RapA N-terminal Tudor like domain H9L11_04650 PF13638 PIN domain H9L11_04650 PF02562 PhoH-like protein H9L11_04655 PF01523 Putative modulator of DNA gyrase H9L11_04660 PF00795 Carbon-nitrogen hydrolase H9L11_04665 PF13116 Protein of unknown function H9L11_04665 PF13502 AsmA-like C-terminal region H9L11_04670 PF10150 Ribonuclease E/G family H9L11_04670 PF00575 S1 RNA binding domain H9L11_04675 PF02545 Maf-like protein H9L11_04680 PF04093 rod shape-determining protein MreD H9L11_04685 PF04085 rod shape-determining protein MreC H9L11_04710 PF13401 AAA domain H9L11_04710 PF01471 Putative peptidoglycan binding domain H9L11_04715 PF03958 Bacterial type II/III secretion system short domain H9L11_04715 PF00263 Bacterial type II and III secretion system protein H9L11_04735 PF00990 Diguanylate cyclase, GGDEF domain H9L11_04735 PF00563 EAL domain H9L11_04735 PF17157 Gammaproteobacterial periplasmic sensor domain H9L11_04740 PF00436 Single-strand binding protein family H9L11_04745 PF00196 Bacterial regulatory proteins, luxR family H9L11_04750 PF00483 Nucleotidyl transferase H9L11_04755 PF00005 ABC transporter H9L11_04755 PF17760 UvrA interaction domain H9L11_04755 PF17755 UvrA DNA-binding domain H9L11_04765 PF00266 Aminotransferase class-V H9L11_04770 PF00696 Amino acid kinase family H9L11_04770 PF01842 ACT domain H9L11_04775 PF02310 B12 binding domain H9L11_04775 PF02574 Homocysteine S-methyltransferase H9L11_04775 PF00809 Pterin binding enzyme H9L11_04775 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9L11_04775 PF02607 B12 binding domain H9L11_04780 PF00999 Sodium/hydrogen exchanger family H9L11_04835 PF01507 Phosphoadenosine phosphosulfate reductase family H9L11_04840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9L11_04840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9L11_04845 PF00175 Oxidoreductase NAD-binding domain H9L11_04845 PF00258 Flavodoxin H9L11_04845 PF00667 FAD binding domain H9L11_04865 PF01207 Dihydrouridine synthase (Dus) H9L11_04870 PF01475 Ferric uptake regulator family H9L11_04880 PF00342 Phosphoglucose isomerase H9L11_04885 PF01894 Uncharacterised protein family UPF0047 H9L11_04890 PF01168 Alanine racemase, N-terminal domain H9L11_04890 PF00842 Alanine racemase, C-terminal domain H9L11_04895 PF03796 DnaB-like helicase C terminal domain H9L11_04895 PF00772 DnaB-like helicase N terminal domain H9L11_04905 PF03948 Ribosomal protein L9, C-terminal domain H9L11_04905 PF01281 Ribosomal protein L9, N-terminal domain H9L11_04910 PF01084 Ribosomal protein S18 H9L11_04915 PF00436 Single-strand binding protein family H9L11_04920 PF01250 Ribosomal protein S6 H9L11_04925 PF00834 Ribulose-phosphate 3 epimerase family H9L11_04930 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9L11_04940 PF01761 3-dehydroquinate synthase H9L11_04945 PF01202 Shikimate kinase H9L11_04950 PF11741 AMIN domain H9L11_04950 PF07660 Secretin and TonB N terminus short domain H9L11_04950 PF03958 Bacterial type II/III secretion system short domain H9L11_04950 PF00263 Bacterial type II and III secretion system protein H9L11_04955 PF04351 Pilus assembly protein, PilP H9L11_04965 PF05137 Fimbrial assembly protein (PilN) H9L11_04975 PF00905 Penicillin binding protein transpeptidase domain H9L11_04975 PF00912 Transglycosylase H9L11_04975 PF17092 Penicillin-binding protein OB-like domain H9L11_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_04980 PF03466 LysR substrate binding domain H9L11_04985 PF00462 Glutaredoxin H9L11_04985 PF08534 Redoxin H9L11_04990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9L11_04990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_05000 PF00583 Acetyltransferase (GNAT) family H9L11_05000 PF14698 Argininosuccinate lyase C-terminal H9L11_05000 PF00206 Lyase H9L11_05005 PF00764 Arginosuccinate synthase H9L11_05010 PF00696 Amino acid kinase family H9L11_05015 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9L11_05015 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9L11_05020 PF01546 Peptidase family M20/M25/M40 H9L11_05020 PF07687 Peptidase dimerisation domain H9L11_05025 PF00311 Phosphoenolpyruvate carboxylase H9L11_05035 PF02219 Methylenetetrahydrofolate reductase H9L11_05040 PF00742 Homoserine dehydrogenase H9L11_05040 PF03447 Homoserine dehydrogenase, NAD binding domain H9L11_05040 PF00696 Amino acid kinase family H9L11_05045 PF01053 Cys/Met metabolism PLP-dependent enzyme H9L11_05050 PF01340 Met Apo-repressor, MetJ H9L11_05055 PF03949 Malic enzyme, NAD binding domain H9L11_05055 PF00390 Malic enzyme, N-terminal domain H9L11_05060 PF00210 Ferritin-like domain H9L11_05065 PF04324 BFD-like [2Fe-2S] binding domain H9L11_05070 PF03143 Elongation factor Tu C-terminal domain H9L11_05070 PF03144 Elongation factor Tu domain 2 H9L11_05070 PF00009 Elongation factor Tu GTP binding domain H9L11_05075 PF00679 Elongation factor G C-terminus H9L11_05075 PF14492 Elongation Factor G, domain II H9L11_05075 PF03764 Elongation factor G, domain IV H9L11_05075 PF03144 Elongation factor Tu domain 2 H9L11_05075 PF00009 Elongation factor Tu GTP binding domain H9L11_05080 PF00177 Ribosomal protein S7p/S5e H9L11_05085 PF00164 Ribosomal protein S12/S23 H9L11_05090 PF04077 DsrH like protein H9L11_05095 PF02635 DsrE/DsrF-like family H9L11_05100 PF02635 DsrE/DsrF-like family H9L11_05105 PF13309 HTH domain H9L11_05105 PF08348 YheO-like PAS domain H9L11_05110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9L11_05110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_05120 PF04102 SlyX H9L11_05125 PF01112 Asparaginase H9L11_05130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_05140 PF00999 Sodium/hydrogen exchanger family H9L11_05140 PF02254 TrkA-N domain H9L11_05145 PF02525 Flavodoxin-like fold H9L11_05150 PF00005 ABC transporter H9L11_05150 PF12848 ABC transporter H9L11_05160 PF00561 alpha/beta hydrolase fold H9L11_05165 PF06794 Uncharacterised protein family (UPF0270) H9L11_05170 PF00485 Phosphoribulokinase / Uridine kinase family H9L11_05175 PF13545 Crp-like helix-turn-helix domain H9L11_05175 PF00027 Cyclic nucleotide-binding domain H9L11_05185 PF00171 Aldehyde dehydrogenase family H9L11_05190 PF04958 Arginine N-succinyltransferase beta subunit H9L11_05195 PF00202 Aminotransferase class-III H9L11_05200 PF00117 Glutamine amidotransferase class-I H9L11_05205 PF01047 MarR family H9L11_05210 PF00892 EamA-like transporter family H9L11_05220 PF07687 Peptidase dimerisation domain H9L11_05220 PF01546 Peptidase family M20/M25/M40 H9L11_05225 PF03806 AbgT putative transporter family H9L11_05230 PF03466 LysR substrate binding domain H9L11_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_05245 PF00579 tRNA synthetases class I (W and Y) H9L11_05250 PF13419 Haloacid dehalogenase-like hydrolase H9L11_05255 PF00588 SpoU rRNA Methylase family H9L11_05255 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9L11_05260 PF08206 Ribonuclease B OB domain H9L11_05260 PF08461 Ribonuclease R winged-helix domain H9L11_05260 PF00773 RNB domain H9L11_05260 PF00575 S1 RNA binding domain H9L11_05260 PF17876 Cold shock domain H9L11_05265 PF02082 Transcriptional regulator H9L11_05270 PF00175 Oxidoreductase NAD-binding domain H9L11_05270 PF00042 Globin H9L11_05270 PF00970 Oxidoreductase FAD-binding domain H9L11_05275 PF08238 Sel1 repeat H9L11_05280 PF00709 Adenylosuccinate synthetase H9L11_05285 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) H9L11_05290 PF01145 SPFH domain / Band 7 family H9L11_05295 PF12221 Bacterial membrane protein N terminal H9L11_05295 PF01145 SPFH domain / Band 7 family H9L11_05300 PF01926 50S ribosome-binding GTPase H9L11_05300 PF16360 GTP-binding GTPase Middle Region H9L11_05300 PF13167 GTP-binding GTPase N-terminal H9L11_05305 PF17209 Hfq protein H9L11_05315 PF08676 MutL C terminal dimerisation domain H9L11_05315 PF01119 DNA mismatch repair protein, C-terminal domain H9L11_05320 PF01520 N-acetylmuramoyl-L-alanine amidase H9L11_05325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H9L11_05330 PF08331 Domain of unknown function (DUF1730) H9L11_05395 PF00929 Exonuclease H9L11_05400 PF03193 RsgA GTPase H9L11_05405 PF02666 Phosphatidylserine decarboxylase H9L11_05410 PF02080 TrkA-C domain H9L11_05410 PF03600 Citrate transporter H9L11_05420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H9L11_05420 PF01676 Metalloenzyme superfamily H9L11_05425 PF00581 Rhodanese-like domain H9L11_05430 PF02556 Preprotein translocase subunit SecB H9L11_05435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H9L11_05435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H9L11_05440 PF06426 Serine acetyltransferase, N-terminal H9L11_05440 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_05445 PF01551 Peptidase family M23 H9L11_05455 PF00440 Bacterial regulatory proteins, tetR family H9L11_05455 PF08360 QacR-like protein, C-terminal region H9L11_05465 PF00152 tRNA synthetases class II (D, K and N) H9L11_05470 PF02910 Fumarate reductase flavoprotein C-term H9L11_05470 PF00890 FAD binding domain H9L11_05475 PF13085 2Fe-2S iron-sulfur cluster binding domain H9L11_05475 PF13183 4Fe-4S dicluster domain H9L11_05480 PF02300 Fumarate reductase subunit C H9L11_05485 PF02313 Fumarate reductase subunit D H9L11_05495 PF01132 Elongation factor P (EF-P) OB domain H9L11_05495 PF08207 Elongation factor P (EF-P) KOW-like domain H9L11_05495 PF09285 Elongation factor P, C-terminal H9L11_05500 PF04055 Radical SAM superfamily H9L11_05505 PF02308 MgtC family H9L11_05515 PF00118 TCP-1/cpn60 chaperonin family H9L11_05520 PF00166 Chaperonin 10 Kd subunit H9L11_05525 PF01554 MatE H9L11_05530 PF00365 Phosphofructokinase H9L11_05535 PF01545 Cation efflux family H9L11_05535 PF16916 Dimerisation domain of Zinc Transporter H9L11_05540 PF07813 LTXXQ motif family protein H9L11_05545 PF00072 Response regulator receiver domain H9L11_05545 PF00486 Transcriptional regulatory protein, C terminal H9L11_05550 PF00672 HAMP domain H9L11_05550 PF00512 His Kinase A (phospho-acceptor) domain H9L11_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_05550 PF16527 Two-component sensor protein CpxA, periplasmic domain H9L11_05555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9L11_05555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9L11_05560 PF00588 SpoU rRNA Methylase family H9L11_05565 PF04186 FxsA cytoplasmic membrane protein H9L11_05570 PF00206 Lyase H9L11_05570 PF10415 Fumarase C C-terminus H9L11_05575 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9L11_05580 PF11412 Disulphide bond corrector protein DsbC H9L11_05580 PF02683 Cytochrome C biogenesis protein transmembrane region H9L11_05585 PF00196 Bacterial regulatory proteins, luxR family H9L11_05585 PF00072 Response regulator receiver domain H9L11_05590 PF03471 Transporter associated domain H9L11_05590 PF02080 TrkA-C domain H9L11_05590 PF00999 Sodium/hydrogen exchanger family H9L11_05600 PF00474 Sodium:solute symporter family H9L11_05615 PF10415 Fumarase C C-terminus H9L11_05615 PF00206 Lyase H9L11_05620 PF00512 His Kinase A (phospho-acceptor) domain H9L11_05620 PF09308 LuxQ, periplasmic H9L11_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_05620 PF00072 Response regulator receiver domain H9L11_05625 PF12832 MFS_1 like family H9L11_05640 PF00501 AMP-binding enzyme H9L11_05640 PF13193 AMP-binding enzyme C-terminal domain H9L11_05640 PF16177 Acetyl-coenzyme A synthetase N-terminus H9L11_05645 PF01220 Dehydroquinase class II H9L11_05650 PF00364 Biotin-requiring enzyme H9L11_05655 PF02785 Biotin carboxylase C-terminal domain H9L11_05655 PF00289 Biotin carboxylase, N-terminal domain H9L11_05655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9L11_05665 PF01207 Dihydrouridine synthase (Dus) H9L11_05670 PF02954 Bacterial regulatory protein, Fis family H9L11_05680 PF00005 ABC transporter H9L11_05680 PF12848 ABC transporter H9L11_05730 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9L11_05730 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9L11_05730 PF01276 Orn/Lys/Arg decarboxylase, major domain H9L11_05735 PF13520 Amino acid permease H9L11_05740 PF18500 CadC C-terminal domain 1 H9L11_05740 PF00486 Transcriptional regulatory protein, C terminal H9L11_05745 PF13411 MerR HTH family regulatory protein H9L11_05750 PF01808 AICARFT/IMPCHase bienzyme H9L11_05750 PF02142 MGS-like domain H9L11_05755 PF02844 Phosphoribosylglycinamide synthetase, N domain H9L11_05755 PF02843 Phosphoribosylglycinamide synthetase, C domain H9L11_05755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H9L11_05765 PF00216 Bacterial DNA-binding protein H9L11_05770 PF01595 Cyclin M transmembrane N-terminal domain H9L11_05770 PF00571 CBS domain H9L11_05775 PF04222 Protein of unknown function (DUF416) H9L11_05780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9L11_05785 PF03167 Uracil DNA glycosylase superfamily H9L11_05790 PF01208 Uroporphyrinogen decarboxylase (URO-D) H9L11_05795 PF09297 NADH pyrophosphatase zinc ribbon domain H9L11_05795 PF00293 NUDIX domain H9L11_05800 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H9L11_05805 PF04998 RNA polymerase Rpb1, domain 5 H9L11_05805 PF05000 RNA polymerase Rpb1, domain 4 H9L11_05805 PF04983 RNA polymerase Rpb1, domain 3 H9L11_05805 PF00623 RNA polymerase Rpb1, domain 2 H9L11_05805 PF04997 RNA polymerase Rpb1, domain 1 H9L11_05810 PF04563 RNA polymerase beta subunit H9L11_05810 PF04561 RNA polymerase Rpb2, domain 2 H9L11_05810 PF04565 RNA polymerase Rpb2, domain 3 H9L11_05810 PF10385 RNA polymerase beta subunit external 1 domain H9L11_05810 PF00562 RNA polymerase Rpb2, domain 6 H9L11_05810 PF04560 RNA polymerase Rpb2, domain 7 H9L11_05815 PF16320 Ribosomal protein L7/L12 dimerisation domain H9L11_05815 PF00542 Ribosomal protein L7/L12 C-terminal domain H9L11_05820 PF00466 Ribosomal protein L10 H9L11_05825 PF00687 Ribosomal protein L1p/L10e family H9L11_05830 PF00298 Ribosomal protein L11, RNA binding domain H9L11_05830 PF03946 Ribosomal protein L11, N-terminal domain H9L11_05835 PF02357 Transcription termination factor nusG H9L11_05835 PF00467 KOW motif H9L11_05840 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H9L11_05845 PF00009 Elongation factor Tu GTP binding domain H9L11_05845 PF03144 Elongation factor Tu domain 2 H9L11_05845 PF03143 Elongation factor Tu C-terminal domain H9L11_05870 PF00485 Phosphoribulokinase / Uridine kinase family H9L11_05875 PF02237 Biotin protein ligase C terminal domain H9L11_05875 PF08279 HTH domain H9L11_05875 PF03099 Biotin/lipoate A/B protein ligase family H9L11_05880 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H9L11_05880 PF01565 FAD binding domain H9L11_05890 PF13091 PLD-like domain H9L11_05955 PF01177 Asp/Glu/Hydantoin racemase H9L11_05965 PF00593 TonB dependent receptor H9L11_05965 PF07715 TonB-dependent Receptor Plug Domain H9L11_05970 PF05958 tRNA (Uracil-5-)-methyltransferase H9L11_05975 PF12161 HsdM N-terminal domain H9L11_05975 PF02384 N-6 DNA Methylase H9L11_06010 PF06114 IrrE N-terminal-like domain H9L11_06020 PF00075 RNase H H9L11_06025 PF04002 RadC-like JAB domain H9L11_06080 PF00440 Bacterial regulatory proteins, tetR family H9L11_06085 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_06085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9L11_06090 PF01554 MatE H9L11_06095 PF04072 Leucine carboxyl methyltransferase H9L11_06100 PF01726 LexA DNA binding domain H9L11_06100 PF00717 Peptidase S24-like H9L11_06105 PF01553 Acyltransferase H9L11_06110 PF01040 UbiA prenyltransferase family H9L11_06115 PF04345 Chorismate lyase H9L11_06120 PF03748 Flagellar basal body-associated protein FliL H9L11_06125 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease H9L11_06125 PF01694 Rhomboid family H9L11_06130 PF00581 Rhodanese-like domain H9L11_06135 PF04542 Sigma-70 region 2 H9L11_06135 PF04545 Sigma-70, region 4 H9L11_06135 PF00140 Sigma-70 factor, region 1.2 H9L11_06140 PF18075 FtsX extracellular domain H9L11_06145 PF00005 ABC transporter H9L11_06150 PF00448 SRP54-type protein, GTPase domain H9L11_06150 PF02881 SRP54-type protein, helical bundle domain H9L11_06165 PF01914 MarC family integral membrane protein H9L11_06190 PF10694 Protein of unknown function (DUF2500) H9L11_06210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9L11_06210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9L11_06215 PF01022 Bacterial regulatory protein, arsR family H9L11_06220 PF00563 EAL domain H9L11_06220 PF08668 HDOD domain H9L11_06225 PF01810 LysE type translocator H9L11_06230 PF12146 Serine aminopeptidase, S33 H9L11_06250 PF03942 DTW domain H9L11_06255 PF10442 FIST C domain H9L11_06255 PF08495 FIST N domain H9L11_06255 PF00990 Diguanylate cyclase, GGDEF domain H9L11_06255 PF00563 EAL domain H9L11_06260 PF13419 Haloacid dehalogenase-like hydrolase H9L11_06265 PF00589 Phage integrase family H9L11_06265 PF02899 Phage integrase, N-terminal SAM-like domain H9L11_06275 PF01678 Diaminopimelate epimerase H9L11_06280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9L11_06280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9L11_06290 PF01491 Frataxin-like domain H9L11_06295 PF12633 Adenylate cyclase NT domain H9L11_06295 PF01295 Adenylate cyclase, class-I H9L11_06300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H9L11_06300 PF03900 Porphobilinogen deaminase, C-terminal domain H9L11_06305 PF02602 Uroporphyrinogen-III synthase HemD H9L11_06310 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase H9L11_06315 PF07219 HemY protein N-terminus H9L11_06350 PF00175 Oxidoreductase NAD-binding domain H9L11_06355 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_06360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H9L11_06370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_06370 PF07498 Rho termination factor, N-terminal domain H9L11_06370 PF07497 Rho termination factor, RNA-binding domain H9L11_06375 PF00085 Thioredoxin H9L11_06380 PF00271 Helicase conserved C-terminal domain H9L11_06380 PF00270 DEAD/DEAH box helicase H9L11_06385 PF02541 Ppx/GppA phosphatase family H9L11_06395 PF02592 Putative vitamin uptake transporter H9L11_06405 PF00270 DEAD/DEAH box helicase H9L11_06405 PF00271 Helicase conserved C-terminal domain H9L11_06405 PF00570 HRDC domain H9L11_06405 PF16124 RecQ zinc-binding H9L11_06405 PF09382 RQC domain H9L11_06410 PF00892 EamA-like transporter family H9L11_06420 PF01810 LysE type translocator H9L11_06430 PF00580 UvrD/REP helicase N-terminal domain H9L11_06430 PF13361 UvrD-like helicase C-terminal domain H9L11_06440 PF05114 Protein of unknown function (DUF692) H9L11_06460 PF07690 Major Facilitator Superfamily H9L11_06465 PF03466 LysR substrate binding domain H9L11_06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_06470 PF00557 Metallopeptidase family M24 H9L11_06470 PF01321 Creatinase/Prolidase N-terminal domain H9L11_06470 PF01321 Creatinase/Prolidase N-terminal domain H9L11_06470 PF00557 Metallopeptidase family M24 H9L11_06475 PF06968 Biotin and Thiamin Synthesis associated domain H9L11_06475 PF04055 Radical SAM superfamily H9L11_06480 PF05690 Thiazole biosynthesis protein ThiG H9L11_06485 PF02597 ThiS family H9L11_06490 PF00899 ThiF family H9L11_06495 PF02581 Thiamine monophosphate synthase H9L11_06500 PF13667 ThiC-associated domain H9L11_06500 PF01964 Radical SAM ThiC family H9L11_06505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H9L11_06555 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_06560 PF07369 Protein of unknown function (DUF1488) H9L11_06565 PF01488 Shikimate / quinate 5-dehydrogenase H9L11_06565 PF08501 Shikimate dehydrogenase substrate binding domain H9L11_06565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H9L11_06570 PF01218 Coproporphyrinogen III oxidase H9L11_06575 PF01300 Telomere recombination H9L11_06580 PF00731 AIR carboxylase H9L11_06585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H9L11_06585 PF02222 ATP-grasp domain H9L11_06590 PF01396 Topoisomerase DNA binding C4 zinc finger H9L11_06595 PF04361 Protein of unknown function (DUF494) H9L11_06600 PF02481 DNA recombination-mediator protein A H9L11_06600 PF17782 DprA winged helix domain H9L11_06610 PF01327 Polypeptide deformylase H9L11_06615 PF02911 Formyl transferase, C-terminal domain H9L11_06615 PF00551 Formyl transferase H9L11_06620 PF01029 NusB family H9L11_06620 PF01189 16S rRNA methyltransferase RsmB/F H9L11_06625 PF02254 TrkA-N domain H9L11_06625 PF02080 TrkA-C domain H9L11_06630 PF02386 Cation transport protein H9L11_06640 PF03006 Haemolysin-III related H9L11_06645 PF07070 SpoOM protein H9L11_06655 PF06288 Protein of unknown function (DUF1040) H9L11_06660 PF12801 4Fe-4S binding domain H9L11_06660 PF13746 4Fe-4S dicluster domain H9L11_06660 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase H9L11_06665 PF01636 Phosphotransferase enzyme family H9L11_06670 PF01323 DSBA-like thioredoxin domain H9L11_06675 PF01553 Acyltransferase H9L11_06720 PF00239 Resolvase, N terminal domain H9L11_06720 PF02796 Helix-turn-helix domain of resolvase H9L11_06730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9L11_06730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9L11_06730 PF00205 Thiamine pyrophosphate enzyme, central domain H9L11_06740 PF01063 Amino-transferase class IV H9L11_06745 PF00920 Dehydratase family H9L11_06750 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_06750 PF00585 C-terminal regulatory domain of Threonine dehydratase H9L11_06755 PF03466 LysR substrate binding domain H9L11_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_06760 PF07690 Major Facilitator Superfamily H9L11_06765 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_06770 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_06775 PF12804 MobA-like NTP transferase domain H9L11_06775 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_06780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H9L11_06780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H9L11_06785 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9L11_06785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_06790 PF00231 ATP synthase H9L11_06795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_06795 PF00306 ATP synthase alpha/beta chain, C terminal domain H9L11_06795 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9L11_06800 PF00213 ATP synthase delta (OSCP) subunit H9L11_06805 PF00430 ATP synthase B/B' CF(0) H9L11_06810 PF00137 ATP synthase subunit C H9L11_06815 PF00119 ATP synthase A chain H9L11_06820 PF03899 ATP synthase I chain H9L11_06825 PF17762 HTH domain found in ParB protein H9L11_06825 PF02195 ParB-like nuclease domain H9L11_06830 PF13614 AAA domain H9L11_06835 PF02527 rRNA small subunit methyltransferase G H9L11_06840 PF01134 Glucose inhibited division protein A H9L11_06840 PF13932 GidA associated domain H9L11_06845 PF00258 Flavodoxin H9L11_06850 PF12631 MnmE helical domain H9L11_06850 PF10396 GTP-binding protein TrmE N-terminus H9L11_06850 PF01926 50S ribosome-binding GTPase H9L11_06855 PF02096 60Kd inner membrane protein H9L11_06855 PF14849 YidC periplasmic domain H9L11_06860 PF01809 Putative membrane protein insertion efficiency factor H9L11_06865 PF00825 Ribonuclease P H9L11_06870 PF00468 Ribosomal protein L34 H9L11_06875 PF00005 ABC transporter H9L11_06880 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_06885 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_06890 PF00308 Bacterial dnaA protein H9L11_06890 PF11638 DnaA N-terminal domain H9L11_06890 PF08299 Bacterial dnaA protein helix-turn-helix H9L11_06895 PF00712 DNA polymerase III beta subunit, N-terminal domain H9L11_06895 PF02767 DNA polymerase III beta subunit, central domain H9L11_06895 PF02768 DNA polymerase III beta subunit, C-terminal domain H9L11_06900 PF02463 RecF/RecN/SMC N terminal domain H9L11_06905 PF18053 DNA gyrase B subunit insert domain H9L11_06905 PF00204 DNA gyrase B H9L11_06905 PF00986 DNA gyrase B subunit, carboxyl terminus H9L11_06905 PF01751 Toprim domain H9L11_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_06915 PF00011 Hsp20/alpha crystallin family H9L11_06920 PF00155 Aminotransferase class I and II H9L11_06925 PF00128 Alpha amylase, catalytic domain H9L11_06930 PF05746 DALR anticodon binding domain H9L11_06930 PF02092 Glycyl-tRNA synthetase beta subunit H9L11_06935 PF02091 Glycyl-tRNA synthetase alpha subunit H9L11_06940 PF01169 Uncharacterized protein family UPF0016 H9L11_06950 PF01206 Sulfurtransferase TusA H9L11_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_06960 PF03466 LysR substrate binding domain H9L11_06965 PF00107 Zinc-binding dehydrogenase H9L11_06965 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_06970 PF02803 Thiolase, C-terminal domain H9L11_06970 PF00108 Thiolase, N-terminal domain H9L11_06975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9L11_06975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9L11_06975 PF00378 Enoyl-CoA hydratase/isomerase H9L11_06980 PF09186 Domain of unknown function (DUF1949) H9L11_06980 PF01205 Uncharacterized protein family UPF0029 H9L11_06985 PF02386 Cation transport protein H9L11_06990 PF12724 Flavodoxin domain H9L11_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_07025 PF03466 LysR substrate binding domain H9L11_07030 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H9L11_07030 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H9L11_07035 PF04380 Membrane fusogenic activity H9L11_07040 PF00873 AcrB/AcrD/AcrF family H9L11_07045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_07050 PF00440 Bacterial regulatory proteins, tetR family H9L11_07050 PF16295 Tetracyclin repressor-like, C-terminal domain H9L11_07055 PF13361 UvrD-like helicase C-terminal domain H9L11_07055 PF00580 UvrD/REP helicase N-terminal domain H9L11_07060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9L11_07090 PF13419 Haloacid dehalogenase-like hydrolase H9L11_07095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_07095 PF00005 ABC transporter H9L11_07100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_07105 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_07110 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_07110 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_07120 PF00356 Bacterial regulatory proteins, lacI family H9L11_07120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9L11_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_07125 PF03466 LysR substrate binding domain H9L11_07130 PF00893 Small Multidrug Resistance protein H9L11_07135 PF00893 Small Multidrug Resistance protein H9L11_07140 PF00920 Dehydratase family H9L11_07145 PF01202 Shikimate kinase H9L11_07150 PF02447 GntP family permease H9L11_07155 PF01081 KDPG and KHG aldolase H9L11_07160 PF01048 Phosphorylase superfamily H9L11_07165 PF03466 LysR substrate binding domain H9L11_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_07170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9L11_07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_07175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H9L11_07180 PF01432 Peptidase family M3 H9L11_07185 PF01037 Lrp/AsnC ligand binding domain H9L11_07190 PF00563 EAL domain H9L11_07190 PF00990 Diguanylate cyclase, GGDEF domain H9L11_07190 PF08448 PAS fold H9L11_07195 PF04445 Putative SAM-dependent methyltransferase H9L11_07205 PF00892 EamA-like transporter family H9L11_07210 PF00582 Universal stress protein family H9L11_07215 PF00210 Ferritin-like domain H9L11_07220 PF10625 Universal stress protein B (UspB) H9L11_07230 PF01590 GAF domain H9L11_07230 PF02954 Bacterial regulatory protein, Fis family H9L11_07230 PF00158 Sigma-54 interaction domain H9L11_07255 PF00781 Diacylglycerol kinase catalytic domain H9L11_07285 PF01594 AI-2E family transporter H9L11_07290 PF00563 EAL domain H9L11_07290 PF03707 Bacterial signalling protein N terminal repeat H9L11_07290 PF00990 Diguanylate cyclase, GGDEF domain H9L11_07300 PF02646 RmuC family H9L11_07305 PF01209 ubiE/COQ5 methyltransferase family H9L11_07310 PF02036 SCP-2 sterol transfer family H9L11_07315 PF03109 ABC1 family H9L11_07320 PF02416 mttA/Hcf106 family H9L11_07325 PF02416 mttA/Hcf106 family H9L11_07330 PF00902 Sec-independent protein translocase protein (TatC) H9L11_07340 PF01026 TatD related DNase H9L11_07345 PF00490 Delta-aminolevulinic acid dehydratase H9L11_07350 PF00583 Acetyltransferase (GNAT) family H9L11_07355 PF01612 3'-5' exonuclease H9L11_07355 PF00476 DNA polymerase family A H9L11_07355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9L11_07355 PF01367 5'-3' exonuclease, C-terminal SAM fold H9L11_07360 PF01926 50S ribosome-binding GTPase H9L11_07365 PF00034 Cytochrome c H9L11_07375 PF04220 Der GTPase activator (YihI) H9L11_07380 PF10675 Protein of unknown function (DUF2489) H9L11_07385 PF04055 Radical SAM superfamily H9L11_07385 PF06969 HemN C-terminal domain H9L11_07390 PF00962 Adenosine/AMP deaminase H9L11_07395 PF00563 EAL domain H9L11_07395 PF00990 Diguanylate cyclase, GGDEF domain H9L11_07395 PF03707 Bacterial signalling protein N terminal repeat H9L11_07400 PF02954 Bacterial regulatory protein, Fis family H9L11_07400 PF00072 Response regulator receiver domain H9L11_07400 PF00158 Sigma-54 interaction domain H9L11_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_07405 PF00512 His Kinase A (phospho-acceptor) domain H9L11_07405 PF00989 PAS fold H9L11_07415 PF00120 Glutamine synthetase, catalytic domain H9L11_07415 PF03951 Glutamine synthetase, beta-Grasp domain H9L11_07420 PF00009 Elongation factor Tu GTP binding domain H9L11_07420 PF00679 Elongation factor G C-terminus H9L11_07420 PF03144 Elongation factor Tu domain 2 H9L11_07425 PF00308 Bacterial dnaA protein H9L11_07425 PF08299 Bacterial dnaA protein helix-turn-helix H9L11_07435 PF03631 Virulence factor BrkB H9L11_07440 PF02580 D-Tyr-tRNA(Tyr) deacylase H9L11_07445 PF09500 Putative thioesterase (yiiD_Cterm) H9L11_07445 PF00583 Acetyltransferase (GNAT) family H9L11_07455 PF01293 Phosphoenolpyruvate carboxykinase H9L11_07460 PF01430 Hsp33 protein H9L11_07465 PF01479 S4 domain H9L11_07470 PF11356 Type II secretion system protein C H9L11_07475 PF03958 Bacterial type II/III secretion system short domain H9L11_07475 PF00263 Bacterial type II and III secretion system protein H9L11_07480 PF00437 Type II/IV secretion system protein H9L11_07485 PF00482 Type II secretion system (T2SS), protein F H9L11_07490 PF08334 Type II secretion system (T2SS), protein G H9L11_07490 PF07963 Prokaryotic N-terminal methylation motif H9L11_07495 PF12019 Type II transport protein GspH H9L11_07500 PF02501 Type II secretion system (T2SS), protein I H9L11_07500 PF07963 Prokaryotic N-terminal methylation motif H9L11_07505 PF11612 Type II secretion system (T2SS), protein J H9L11_07505 PF07963 Prokaryotic N-terminal methylation motif H9L11_07510 PF03934 Type II secretion system (T2SS), protein K H9L11_07515 PF05134 Type II secretion system (T2SS), protein L H9L11_07515 PF12693 GspL periplasmic domain H9L11_07520 PF04612 Type II secretion system (T2SS), protein M H9L11_07525 PF01203 Type II secretion system (T2SS), protein N H9L11_07530 PF00459 Inositol monophosphatase family H9L11_07535 PF00293 NUDIX domain H9L11_07540 PF01521 Iron-sulphur cluster biosynthesis H9L11_07540 PF01106 NifU-like domain H9L11_07545 PF00156 Phosphoribosyl transferase domain H9L11_07550 PF00561 alpha/beta hydrolase fold H9L11_07560 PF16921 Tex protein YqgF-like domain H9L11_07560 PF17674 HHH domain H9L11_07560 PF00575 S1 RNA binding domain H9L11_07560 PF09371 Tex-like protein N-terminal domain H9L11_07570 PF01272 Transcription elongation factor, GreA/GreB, C-term H9L11_07570 PF03449 Transcription elongation factor, N-terminal H9L11_07580 PF00486 Transcriptional regulatory protein, C terminal H9L11_07580 PF00072 Response regulator receiver domain H9L11_07585 PF00512 His Kinase A (phospho-acceptor) domain H9L11_07585 PF00672 HAMP domain H9L11_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_07590 PF00860 Permease family H9L11_07595 PF00270 DEAD/DEAH box helicase H9L11_07595 PF17191 RecG wedge domain H9L11_07595 PF00271 Helicase conserved C-terminal domain H9L11_07600 PF12105 SpoU, rRNA methylase, C-terminal H9L11_07600 PF00588 SpoU rRNA Methylase family H9L11_07605 PF13291 ACT domain H9L11_07605 PF02824 TGS domain H9L11_07605 PF04607 Region found in RelA / SpoT proteins H9L11_07610 PF01192 RNA polymerase Rpb6 H9L11_07615 PF00625 Guanylate kinase H9L11_07630 PF02472 Biopolymer transport protein ExbD/TolR H9L11_07635 PF01618 MotA/TolQ/ExbB proton channel family H9L11_07650 PF00593 TonB dependent receptor H9L11_07650 PF07715 TonB-dependent Receptor Plug Domain H9L11_07655 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_07660 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_07660 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_07665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_07670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_07670 PF00005 ABC transporter H9L11_07675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_07675 PF00005 ABC transporter H9L11_07710 PF00075 RNase H H9L11_07715 PF02673 Bacitracin resistance protein BacA H9L11_07720 PF01699 Sodium/calcium exchanger protein H9L11_07725 PF00924 Mechanosensitive ion channel H9L11_07725 PF05552 Conserved TM helix H9L11_07740 PF00072 Response regulator receiver domain H9L11_07740 PF13188 PAS domain H9L11_07740 PF08448 PAS fold H9L11_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_07740 PF00512 His Kinase A (phospho-acceptor) domain H9L11_07745 PF00072 Response regulator receiver domain H9L11_07745 PF00486 Transcriptional regulatory protein, C terminal H9L11_07750 PF00498 FHA domain H9L11_07750 PF00990 Diguanylate cyclase, GGDEF domain H9L11_07750 PF00563 EAL domain H9L11_07755 PF00990 Diguanylate cyclase, GGDEF domain H9L11_07790 PF04002 RadC-like JAB domain H9L11_07805 PF08340 Domain of unknown function (DUF1732) H9L11_07805 PF03755 YicC-like family, N-terminal region H9L11_07810 PF03725 3' exoribonuclease family, domain 2 H9L11_07810 PF01138 3' exoribonuclease family, domain 1 H9L11_07815 PF00156 Phosphoribosyl transferase domain H9L11_07820 PF03279 Bacterial lipid A biosynthesis acyltransferase H9L11_07825 PF00440 Bacterial regulatory proteins, tetR family H9L11_07830 PF04127 DNA / pantothenate metabolism flavoprotein H9L11_07830 PF02441 Flavoprotein H9L11_07835 PF00672 HAMP domain H9L11_07835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_07835 PF17200 Single Cache domain 2 H9L11_07840 PF04002 RadC-like JAB domain H9L11_07845 PF00830 Ribosomal L28 family H9L11_07850 PF00471 Ribosomal protein L33 H9L11_07860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H9L11_07860 PF06827 Zinc finger found in FPG and IleRS H9L11_07860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H9L11_07865 PF05686 Glycosyl transferase family 90 H9L11_07870 PF01467 Cytidylyltransferase-like H9L11_07875 PF13439 Glycosyltransferase Family 4 H9L11_07875 PF00534 Glycosyl transferases group 1 H9L11_07880 PF00535 Glycosyl transferase family 2 H9L11_07885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9L11_07890 PF01219 Prokaryotic diacylglycerol kinase H9L11_07900 PF02348 Cytidylyltransferase H9L11_07910 PF03023 Lipid II flippase MurJ H9L11_07920 PF02397 Bacterial sugar transferase H9L11_07925 PF13537 Glutamine amidotransferase domain H9L11_07925 PF00733 Asparagine synthase H9L11_07930 PF02719 Polysaccharide biosynthesis protein H9L11_07940 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H9L11_07945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9L11_07955 PF03279 Bacterial lipid A biosynthesis acyltransferase H9L11_07960 PF01370 NAD dependent epimerase/dehydratase family H9L11_07965 PF06082 Exopolysaccharide biosynthesis protein YbjH H9L11_07985 PF00953 Glycosyl transferase family 4 H9L11_07990 PF00009 Elongation factor Tu GTP binding domain H9L11_08005 PF01507 Phosphoadenosine phosphosulfate reductase family H9L11_08010 PF02080 TrkA-C domain H9L11_08010 PF03600 Citrate transporter H9L11_08015 PF00005 ABC transporter H9L11_08060 PF01510 N-acetylmuramoyl-L-alanine amidase H9L11_08085 PF16363 GDP-mannose 4,6 dehydratase H9L11_08090 PF04321 RmlD substrate binding domain H9L11_08105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H9L11_08110 PF00483 Nucleotidyl transferase H9L11_08120 PF01061 ABC-2 type transporter H9L11_08125 PF02563 Polysaccharide biosynthesis/export protein H9L11_08125 PF10531 SLBB domain H9L11_08135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H9L11_08135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H9L11_08135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H9L11_08140 PF00121 Triosephosphate isomerase H9L11_08160 PF08220 DeoR-like helix-turn-helix domain H9L11_08160 PF00455 DeoR C terminal sensor domain H9L11_08165 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H9L11_08170 PF06005 Cell division protein ZapB H9L11_08175 PF03737 Aldolase/RraA H9L11_08180 PF01040 UbiA prenyltransferase family H9L11_08185 PF13358 DDE superfamily endonuclease H9L11_08215 PF04002 RadC-like JAB domain H9L11_08225 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_08225 PF07724 AAA domain (Cdc48 subfamily) H9L11_08230 PF00227 Proteasome subunit H9L11_08235 PF13358 DDE superfamily endonuclease H9L11_08245 PF00356 Bacterial regulatory proteins, lacI family H9L11_08250 PF00270 DEAD/DEAH box helicase H9L11_08250 PF00271 Helicase conserved C-terminal domain H9L11_08250 PF17764 3′ DNA-binding domain (3′BD) H9L11_08250 PF18074 Primosomal protein N C-terminal domain H9L11_08250 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H9L11_08255 PF01197 Ribosomal protein L31 H9L11_08260 PF00338 Ribosomal protein S10p/S20e H9L11_08265 PF00297 Ribosomal protein L3 H9L11_08270 PF00573 Ribosomal protein L4/L1 family H9L11_08275 PF00276 Ribosomal protein L23 H9L11_08280 PF00181 Ribosomal Proteins L2, RNA binding domain H9L11_08280 PF03947 Ribosomal Proteins L2, C-terminal domain H9L11_08285 PF00203 Ribosomal protein S19 H9L11_08290 PF00237 Ribosomal protein L22p/L17e H9L11_08295 PF07650 KH domain H9L11_08295 PF00189 Ribosomal protein S3, C-terminal domain H9L11_08300 PF00252 Ribosomal protein L16p/L10e H9L11_08305 PF00831 Ribosomal L29 protein H9L11_08310 PF00366 Ribosomal protein S17 H9L11_08315 PF00238 Ribosomal protein L14p/L23e H9L11_08320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H9L11_08320 PF00467 KOW motif H9L11_08325 PF00673 ribosomal L5P family C-terminus H9L11_08325 PF00281 Ribosomal protein L5 H9L11_08330 PF00253 Ribosomal protein S14p/S29e H9L11_08335 PF00410 Ribosomal protein S8 H9L11_08340 PF00347 Ribosomal protein L6 H9L11_08345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H9L11_08350 PF03719 Ribosomal protein S5, C-terminal domain H9L11_08350 PF00333 Ribosomal protein S5, N-terminal domain H9L11_08355 PF00327 Ribosomal protein L30p/L7e H9L11_08360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H9L11_08365 PF00344 SecY translocase H9L11_08370 PF00444 Ribosomal protein L36 H9L11_08375 PF00416 Ribosomal protein S13/S18 H9L11_08380 PF00411 Ribosomal protein S11 H9L11_08385 PF00163 Ribosomal protein S4/S9 N-terminal domain H9L11_08385 PF01479 S4 domain H9L11_08390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H9L11_08390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H9L11_08390 PF01000 RNA polymerase Rpb3/RpoA insert domain H9L11_08395 PF01196 Ribosomal protein L17 H9L11_08405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_08405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9L11_08415 PF13673 Acetyltransferase (GNAT) domain H9L11_08420 PF00271 Helicase conserved C-terminal domain H9L11_08420 PF00270 DEAD/DEAH box helicase H9L11_08420 PF03880 DbpA RNA binding domain H9L11_08430 PF00149 Calcineurin-like phosphoesterase H9L11_08430 PF02872 5'-nucleotidase, C-terminal domain H9L11_08435 PF10414 Sirohaem synthase dimerisation region H9L11_08435 PF14824 Sirohaem biosynthesis protein central H9L11_08435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9L11_08440 PF01507 Phosphoadenosine phosphosulfate reductase family H9L11_08445 PF00009 Elongation factor Tu GTP binding domain H9L11_08450 PF02080 TrkA-C domain H9L11_08450 PF03600 Citrate transporter H9L11_08475 PF00005 ABC transporter H9L11_08485 PF10795 Protein of unknown function (DUF2607) H9L11_08490 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9L11_08495 PF06526 Protein of unknown function (DUF1107) H9L11_08500 PF01625 Peptide methionine sulfoxide reductase H9L11_08505 PF17243 POTRA domain TamA domain 1 H9L11_08505 PF01103 Surface antigen H9L11_08505 PF07244 Surface antigen variable number repeat H9L11_08510 PF04357 TamB, inner membrane protein subunit of TAM complex H9L11_08515 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like H9L11_08525 PF00719 Inorganic pyrophosphatase H9L11_08530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H9L11_08535 PF08245 Mur ligase middle domain H9L11_08535 PF01225 Mur ligase family, catalytic domain H9L11_08535 PF02875 Mur ligase family, glutamate ligase domain H9L11_08540 PF02441 Flavoprotein H9L11_08550 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_08555 PF00005 ABC transporter H9L11_08560 PF03466 LysR substrate binding domain H9L11_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_08565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9L11_08580 PF16868 NMT1-like family H9L11_08585 PF02863 Arginine repressor, C-terminal domain H9L11_08585 PF01316 Arginine repressor, DNA binding domain H9L11_08590 PF00056 lactate/malate dehydrogenase, NAD binding domain H9L11_08590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9L11_08600 PF00348 Polyprenyl synthetase H9L11_08605 PF00829 Ribosomal prokaryotic L21 protein H9L11_08610 PF01016 Ribosomal L27 protein H9L11_08615 PF01018 GTP1/OBG H9L11_08615 PF01926 50S ribosome-binding GTPase H9L11_08620 PF06738 Putative threonine/serine exporter H9L11_08625 PF12821 Threonine/Serine exporter, ThrE H9L11_08630 PF00186 Dihydrofolate reductase H9L11_08635 PF00149 Calcineurin-like phosphoesterase H9L11_08640 PF04379 ApaG domain H9L11_08645 PF00398 Ribosomal RNA adenine dimethylase H9L11_08650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H9L11_08655 PF09312 SurA N-terminal domain H9L11_08660 PF03968 OstA-like protein H9L11_08660 PF04453 LPS transport system D H9L11_08665 PF05099 Tellurite resistance protein TerB H9L11_08665 PF00226 DnaJ domain H9L11_08675 PF00694 Aconitase C-terminal domain H9L11_08680 PF00330 Aconitase family (aconitate hydratase) H9L11_08685 PF00180 Isocitrate/isopropylmalate dehydrogenase H9L11_08690 PF00682 HMGL-like H9L11_08690 PF08502 LeuA allosteric (dimerisation) domain H9L11_08700 PF01569 PAP2 superfamily H9L11_08710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_08710 PF03466 LysR substrate binding domain H9L11_08715 PF00501 AMP-binding enzyme H9L11_08720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9L11_08720 PF00205 Thiamine pyrophosphate enzyme, central domain H9L11_08720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9L11_08725 PF10369 Small subunit of acetolactate synthase H9L11_08730 PF00990 Diguanylate cyclase, GGDEF domain H9L11_08740 PF00224 Pyruvate kinase, barrel domain H9L11_08740 PF02887 Pyruvate kinase, alpha/beta domain H9L11_08745 PF08220 DeoR-like helix-turn-helix domain H9L11_08745 PF00455 DeoR C terminal sensor domain H9L11_08750 PF01380 SIS domain H9L11_08755 PF00465 Iron-containing alcohol dehydrogenase H9L11_08760 PF02733 Dak1 domain H9L11_08765 PF02734 DAK2 domain H9L11_08770 PF13358 DDE superfamily endonuclease H9L11_08775 PF02896 PEP-utilising enzyme, TIM barrel domain H9L11_08775 PF05524 PEP-utilising enzyme, N-terminal H9L11_08775 PF00391 PEP-utilising enzyme, mobile domain H9L11_08780 PF02954 Bacterial regulatory protein, Fis family H9L11_08780 PF00989 PAS fold H9L11_08780 PF00158 Sigma-54 interaction domain H9L11_08785 PF05068 Mannitol repressor H9L11_08790 PF01232 Mannitol dehydrogenase Rossmann domain H9L11_08790 PF08125 Mannitol dehydrogenase C-terminal domain H9L11_08795 PF02378 Phosphotransferase system, EIIC H9L11_08795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9L11_08795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9L11_08815 PF03180 NLPA lipoprotein H9L11_08840 PF04545 Sigma-70, region 4 H9L11_08840 PF04539 Sigma-70 region 3 H9L11_08840 PF04542 Sigma-70 region 2 H9L11_08840 PF00140 Sigma-70 factor, region 1.2 H9L11_08840 PF03979 Sigma-70 factor, region 1.1 H9L11_08840 PF04546 Sigma-70, non-essential region H9L11_08845 PF10410 DnaB-helicase binding domain of primase H9L11_08845 PF08278 DNA primase DnaG DnaB-binding H9L11_08845 PF08275 DNA primase catalytic core, N-terminal domain H9L11_08845 PF01807 CHC2 zinc finger H9L11_08850 PF09424 Yqey-like protein H9L11_08855 PF01165 Ribosomal protein S21 H9L11_08860 PF00814 Glycoprotease family H9L11_08865 PF00561 alpha/beta hydrolase fold H9L11_08870 PF02660 Glycerol-3-phosphate acyltransferase H9L11_08875 PF02152 Dihydroneopterin aldolase H9L11_08880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9L11_08885 PF02673 Bacitracin resistance protein BacA H9L11_08890 PF01966 HD domain H9L11_08890 PF01743 Poly A polymerase head domain H9L11_08890 PF12627 Probable RNA and SrmB- binding site of polymerase A H9L11_08895 PF13401 AAA domain H9L11_08895 PF01471 Putative peptidoglycan binding domain H9L11_08910 PF08239 Bacterial SH3 domain H9L11_08915 PF01384 Phosphate transporter family H9L11_08920 PF01865 Protein of unknown function DUF47 H9L11_08925 PF01928 CYTH domain H9L11_08935 PF02743 Cache domain H9L11_08935 PF00672 HAMP domain H9L11_08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_08940 PF08335 GlnD PII-uridylyltransferase H9L11_08940 PF03710 Glutamate-ammonia ligase adenylyltransferase H9L11_08945 PF00294 pfkB family carbohydrate kinase H9L11_08945 PF01467 Cytidylyltransferase-like H9L11_08950 PF02321 Outer membrane efflux protein H9L11_08955 PF00293 NUDIX domain H9L11_08960 PF06853 Protein of unknown function (DUF1249) H9L11_08965 PF00149 Calcineurin-like phosphoesterase H9L11_08970 PF05728 Uncharacterised protein family (UPF0227) H9L11_08975 PF00986 DNA gyrase B subunit, carboxyl terminus H9L11_08975 PF00204 DNA gyrase B H9L11_08975 PF01751 Toprim domain H9L11_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_08980 PF03989 DNA gyrase C-terminal domain, beta-propeller H9L11_08980 PF00521 DNA gyrase/topoisomerase IV, subunit A H9L11_08985 PF13180 PDZ domain H9L11_08990 PF00595 PDZ domain H9L11_08995 PF06295 Protein of unknown function (DUF1043) H9L11_09000 PF03969 AFG1-like ATPase H9L11_09005 PF00572 Ribosomal protein L13 H9L11_09010 PF00380 Ribosomal protein S9/S16 H9L11_09015 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H9L11_09015 PF00355 Rieske [2Fe-2S] domain H9L11_09020 PF00032 Cytochrome b(C-terminal)/b6/petD H9L11_09020 PF00033 Cytochrome b/b6/petB H9L11_09025 PF02167 Cytochrome C1 family H9L11_09030 PF02798 Glutathione S-transferase, N-terminal domain H9L11_09030 PF00043 Glutathione S-transferase, C-terminal domain H9L11_09035 PF04386 Stringent starvation protein B H9L11_09040 PF04972 BON domain H9L11_09045 PF13580 SIS domain H9L11_09050 PF02021 Uncharacterised protein family UPF0102 H9L11_09055 PF04348 LppC putative lipoprotein H9L11_09060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9L11_09075 PF01795 MraW methylase family H9L11_09080 PF04999 Cell division protein FtsL H9L11_09085 PF00905 Penicillin binding protein transpeptidase domain H9L11_09085 PF03717 Penicillin-binding Protein dimerisation domain H9L11_09090 PF01225 Mur ligase family, catalytic domain H9L11_09090 PF02875 Mur ligase family, glutamate ligase domain H9L11_09090 PF08245 Mur ligase middle domain H9L11_09095 PF08245 Mur ligase middle domain H9L11_09095 PF02875 Mur ligase family, glutamate ligase domain H9L11_09095 PF01225 Mur ligase family, catalytic domain H9L11_09100 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H9L11_09100 PF00953 Glycosyl transferase family 4 H9L11_09105 PF02875 Mur ligase family, glutamate ligase domain H9L11_09105 PF08245 Mur ligase middle domain H9L11_09110 PF01098 Cell cycle protein H9L11_09115 PF04101 Glycosyltransferase family 28 C-terminal domain H9L11_09115 PF03033 Glycosyltransferase family 28 N-terminal domain H9L11_09120 PF01225 Mur ligase family, catalytic domain H9L11_09120 PF02875 Mur ligase family, glutamate ligase domain H9L11_09120 PF08245 Mur ligase middle domain H9L11_09125 PF08478 POTRA domain, FtsQ-type H9L11_09125 PF03799 Cell division protein FtsQ H9L11_09130 PF02491 SHS2 domain inserted in FTSA H9L11_09135 PF12327 FtsZ family, C-terminal domain H9L11_09135 PF00091 Tubulin/FtsZ family, GTPase domain H9L11_09140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H9L11_09150 PF07516 SecA Wing and Scaffold domain H9L11_09150 PF07517 SecA DEAD-like domain H9L11_09150 PF01043 SecA preprotein cross-linking domain H9L11_09150 PF02810 SEC-C motif H9L11_09155 PF00293 NUDIX domain H9L11_09160 PF01113 Dihydrodipicolinate reductase, N-terminus H9L11_09160 PF05173 Dihydrodipicolinate reductase, C-terminus H9L11_09165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H9L11_09165 PF00117 Glutamine amidotransferase class-I H9L11_09170 PF02142 MGS-like domain H9L11_09170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9L11_09170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H9L11_09185 PF01925 Sulfite exporter TauE/SafE H9L11_09190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_09190 PF03466 LysR substrate binding domain H9L11_09195 PF03458 UPF0126 domain H9L11_09200 PF01497 Periplasmic binding protein H9L11_09205 PF03186 CobD/Cbib protein H9L11_09205 PF17113 Regulatory signalling modulator protein AmpE H9L11_09210 PF01048 Phosphorylase superfamily H9L11_09220 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_09220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9L11_09225 PF01645 Conserved region in glutamate synthase H9L11_09225 PF04898 Glutamate synthase central domain H9L11_09225 PF01493 GXGXG motif H9L11_09225 PF00310 Glutamine amidotransferases class-II H9L11_09230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9L11_09230 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_09235 PF00310 Glutamine amidotransferases class-II H9L11_09235 PF01493 GXGXG motif H9L11_09235 PF01645 Conserved region in glutamate synthase H9L11_09235 PF04898 Glutamate synthase central domain H9L11_09240 PF04055 Radical SAM superfamily H9L11_09240 PF16199 Radical_SAM C-terminal domain H9L11_09245 PF01590 GAF domain H9L11_09245 PF00990 Diguanylate cyclase, GGDEF domain H9L11_09245 PF00563 EAL domain H9L11_09245 PF00360 Phytochrome region H9L11_09250 PF00512 His Kinase A (phospho-acceptor) domain H9L11_09250 PF00989 PAS fold H9L11_09250 PF18415 Histidine kinase receptor ArcB trans-membrane domain H9L11_09250 PF01627 Hpt domain H9L11_09250 PF00072 Response regulator receiver domain H9L11_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_09260 PF00072 Response regulator receiver domain H9L11_09260 PF00486 Transcriptional regulatory protein, C terminal H9L11_09270 PF03737 Aldolase/RraA H9L11_09285 PF13840 ACT domain H9L11_09285 PF00696 Amino acid kinase family H9L11_09285 PF00742 Homoserine dehydrogenase H9L11_09285 PF03447 Homoserine dehydrogenase, NAD binding domain H9L11_09285 PF01842 ACT domain H9L11_09290 PF00288 GHMP kinases N terminal domain H9L11_09290 PF08544 GHMP kinases C terminal H9L11_09295 PF14821 Threonine synthase N terminus H9L11_09295 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_09305 PF01228 Glycine radical H9L11_09310 PF01261 Xylose isomerase-like TIM barrel H9L11_09315 PF03167 Uracil DNA glycosylase superfamily H9L11_09330 PF01235 Sodium:alanine symporter family H9L11_09335 PF03883 Peroxide stress protein YaaA H9L11_09340 PF00271 Helicase conserved C-terminal domain H9L11_09340 PF00270 DEAD/DEAH box helicase H9L11_09345 PF05175 Methyltransferase small domain H9L11_09350 PF05525 Branched-chain amino acid transport protein H9L11_09355 PF00258 Flavodoxin H9L11_09360 PF02899 Phage integrase, N-terminal SAM-like domain H9L11_09360 PF00589 Phage integrase family H9L11_09365 PF10411 Disulfide bond isomerase protein N-terminus H9L11_09365 PF13098 Thioredoxin-like domain H9L11_09370 PF01368 DHH family H9L11_09370 PF17768 RecJ OB domain H9L11_09370 PF02272 DHHA1 domain H9L11_09380 PF01336 OB-fold nucleic acid binding domain H9L11_09380 PF00152 tRNA synthetases class II (D, K and N) H9L11_09385 PF02954 Bacterial regulatory protein, Fis family H9L11_09385 PF00072 Response regulator receiver domain H9L11_09385 PF00158 Sigma-54 interaction domain H9L11_09395 PF00248 Aldo/keto reductase family H9L11_09405 PF02976 DNA mismatch repair enzyme MutH H9L11_09410 PF00293 NUDIX domain H9L11_09415 PF02896 PEP-utilising enzyme, TIM barrel domain H9L11_09415 PF00391 PEP-utilising enzyme, mobile domain H9L11_09415 PF01590 GAF domain H9L11_09415 PF05524 PEP-utilising enzyme, N-terminal H9L11_09420 PF01925 Sulfite exporter TauE/SafE H9L11_09425 PF01790 Prolipoprotein diacylglyceryl transferase H9L11_09430 PF00303 Thymidylate synthase H9L11_09440 PF02690 Na+/Pi-cotransporter H9L11_09445 PF03466 LysR substrate binding domain H9L11_09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_09450 PF01022 Bacterial regulatory protein, arsR family H9L11_09455 PF01649 Ribosomal protein S20 H9L11_09460 PF03023 Lipid II flippase MurJ H9L11_09465 PF06574 FAD synthetase H9L11_09465 PF01687 Riboflavin kinase H9L11_09470 PF06827 Zinc finger found in FPG and IleRS H9L11_09470 PF00133 tRNA synthetases class I (I, L, M and V) H9L11_09470 PF08264 Anticodon-binding domain of tRNA H9L11_09475 PF01252 Signal peptidase (SPase) II H9L11_09480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_09485 PF02401 LytB protein H9L11_09495 PF04397 LytTr DNA-binding domain H9L11_09495 PF00072 Response regulator receiver domain H9L11_09500 PF07694 5TMR of 5TMR-LYT H9L11_09500 PF06580 Histidine kinase H9L11_09505 PF02554 Carbon starvation protein CstA H9L11_09520 PF01380 SIS domain H9L11_09525 PF03702 Anhydro-N-acetylmuramic acid kinase H9L11_09530 PF00933 Glycosyl hydrolase family 3 N terminal domain H9L11_09535 PF00793 DAHP synthetase I family H9L11_09540 PF02153 Prephenate dehydrogenase H9L11_09540 PF01817 Chorismate mutase type II H9L11_09545 PF04225 Opacity-associated protein A LysM-like domain H9L11_09545 PF01551 Peptidase family M23 H9L11_09550 PF07238 PilZ domain H9L11_09555 PF12848 ABC transporter H9L11_09555 PF00005 ABC transporter H9L11_09560 PF01464 Transglycosylase SLT domain H9L11_09560 PF14718 Soluble lytic murein transglycosylase L domain H9L11_09565 PF01371 Trp repressor protein H9L11_09570 PF01931 Protein of unknown function DUF84 H9L11_09575 PF00800 Prephenate dehydratase H9L11_09575 PF01817 Chorismate mutase type II H9L11_09580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9L11_09585 PF01464 Transglycosylase SLT domain H9L11_09585 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_09590 PF13525 Outer membrane lipoprotein H9L11_09595 PF01479 S4 domain H9L11_09595 PF00849 RNA pseudouridylate synthase H9L11_09600 PF02578 Multi-copper polyphenol oxidoreductase laccase H9L11_09605 PF17871 AAA lid domain H9L11_09605 PF07724 AAA domain (Cdc48 subfamily) H9L11_09605 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_09605 PF02861 Clp amino terminal domain, pathogenicity island component H9L11_09605 PF10431 C-terminal, D2-small domain, of ClpB protein H9L11_09650 PF03411 Penicillin-insensitive murein endopeptidase H9L11_09660 PF00037 4Fe-4S binding domain H9L11_09665 PF16325 Peptidase family U32 C-terminal domain H9L11_09665 PF01136 Peptidase family U32 H9L11_09670 PF04381 Putative exonuclease, RdgC H9L11_09675 PF00486 Transcriptional regulatory protein, C terminal H9L11_09675 PF00072 Response regulator receiver domain H9L11_09680 PF11808 Phosphate regulon sensor protein PhoR H9L11_09680 PF00512 His Kinase A (phospho-acceptor) domain H9L11_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_09680 PF00989 PAS fold H9L11_09685 PF12849 PBP superfamily domain H9L11_09690 PF02541 Ppx/GppA phosphatase family H9L11_09695 PF17941 Polyphosphate kinase C-terminal domain 1 H9L11_09695 PF13090 Polyphosphate kinase C-terminal domain 2 H9L11_09695 PF02503 Polyphosphate kinase middle domain H9L11_09695 PF13089 Polyphosphate kinase N-terminal domain H9L11_09700 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_09705 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_09710 PF00005 ABC transporter H9L11_09715 PF01895 PhoU domain H9L11_09720 PF03976 Polyphosphate kinase 2 (PPK2) H9L11_09725 PF03932 CutC family H9L11_09730 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9L11_09730 PF00578 AhpC/TSA family H9L11_09735 PF03466 LysR substrate binding domain H9L11_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_09740 PF01274 Malate synthase H9L11_09745 PF00463 Isocitrate lyase family H9L11_09750 PF00571 CBS domain H9L11_09760 PF02547 Queuosine biosynthesis protein H9L11_09765 PF01702 Queuine tRNA-ribosyltransferase H9L11_09770 PF02699 Preprotein translocase subunit H9L11_09775 PF07549 SecD/SecF GG Motif H9L11_09775 PF02355 Protein export membrane protein H9L11_09775 PF13721 SecD export protein N-terminal TM region H9L11_09780 PF02355 Protein export membrane protein H9L11_09780 PF07549 SecD/SecF GG Motif H9L11_09795 PF00459 Inositol monophosphatase family H9L11_09800 PF00588 SpoU rRNA Methylase family H9L11_09805 PF02082 Transcriptional regulator H9L11_09810 PF00266 Aminotransferase class-V H9L11_09815 PF01592 NifU-like N terminal domain H9L11_09820 PF01521 Iron-sulphur cluster biosynthesis H9L11_09825 PF07743 HSCB C-terminal oligomerisation domain H9L11_09825 PF00226 DnaJ domain H9L11_09830 PF00012 Hsp70 protein H9L11_09835 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_09840 PF04384 Iron-sulphur cluster assembly H9L11_09845 PF00883 Cytosol aminopeptidase family, catalytic domain H9L11_09845 PF12404 Peptidase H9L11_09850 PF00334 Nucleoside diphosphate kinase H9L11_09855 PF04055 Radical SAM superfamily H9L11_09860 PF13464 Domain of unknown function (DUF4115) H9L11_09865 PF04551 GcpE protein H9L11_09870 PF03129 Anticodon binding domain H9L11_09870 PF13393 Histidyl-tRNA synthetase H9L11_09875 PF09976 Tetratricopeptide repeat-like domain H9L11_09880 PF13360 PQQ-like domain H9L11_09885 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H9L11_09885 PF01926 50S ribosome-binding GTPase H9L11_09900 PF13742 OB-fold nucleic acid binding domain H9L11_09900 PF02601 Exonuclease VII, large subunit H9L11_09905 PF00478 IMP dehydrogenase / GMP reductase domain H9L11_09905 PF00571 CBS domain H9L11_09910 PF02540 NAD synthase H9L11_09910 PF00958 GMP synthase C terminal domain H9L11_09910 PF00117 Glutamine amidotransferase class-I H9L11_09915 PF13356 Arm DNA-binding domain H9L11_09915 PF00589 Phage integrase family H9L11_09935 PF13358 DDE superfamily endonuclease H9L11_09960 PF18821 Large polyvalent protein-associated domain 7 H9L11_09960 PF03432 Relaxase/Mobilisation nuclease domain H9L11_10000 PF13358 DDE superfamily endonuclease H9L11_10025 PF00186 Dihydrofolate reductase H9L11_10045 PF07690 Major Facilitator Superfamily H9L11_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_10050 PF03466 LysR substrate binding domain H9L11_10060 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase H9L11_10065 PF01636 Phosphotransferase enzyme family H9L11_10070 PF00809 Pterin binding enzyme H9L11_10075 PF03553 Na+/H+ antiporter family H9L11_10080 PF00704 Glycosyl hydrolases family 18 H9L11_10080 PF06483 Chitinase C H9L11_10085 PF01184 GPR1/FUN34/yaaH family H9L11_10090 PF01235 Sodium:alanine symporter family H9L11_10095 PF01266 FAD dependent oxidoreductase H9L11_10105 PF01053 Cys/Met metabolism PLP-dependent enzyme H9L11_10110 PF00202 Aminotransferase class-III H9L11_10130 PF00583 Acetyltransferase (GNAT) family H9L11_10130 PF00795 Carbon-nitrogen hydrolase H9L11_10135 PF03466 LysR substrate binding domain H9L11_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_10170 PF02384 N-6 DNA Methylase H9L11_10210 PF01695 IstB-like ATP binding protein H9L11_10215 PF02796 Helix-turn-helix domain of resolvase H9L11_10215 PF00665 Integrase core domain H9L11_10230 PF01668 SmpB protein H9L11_10235 PF03364 Polyketide cyclase / dehydrase and lipid transport H9L11_10240 PF03658 RnfH family Ubiquitin H9L11_10245 PF04355 SmpA / OmlA family H9L11_10255 PF02463 RecF/RecN/SMC N terminal domain H9L11_10265 PF01513 ATP-NAD kinase H9L11_10270 PF01025 GrpE H9L11_10275 PF00375 Sodium:dicarboxylate symporter family H9L11_10280 PF00012 Hsp70 protein H9L11_10285 PF00226 DnaJ domain H9L11_10285 PF01556 DnaJ C terminal domain H9L11_10285 PF00684 DnaJ central domain H9L11_10290 PF00114 Pilin (bacterial filament) H9L11_10290 PF07963 Prokaryotic N-terminal methylation motif H9L11_10315 PF03806 AbgT putative transporter family H9L11_10320 PF14437 MafB19-like deaminase H9L11_10325 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_10325 PF01464 Transglycosylase SLT domain H9L11_10330 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H9L11_10330 PF02769 AIR synthase related protein, C-terminal domain H9L11_10330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H9L11_10345 PF07715 TonB-dependent Receptor Plug Domain H9L11_10345 PF00593 TonB dependent receptor H9L11_10360 PF07687 Peptidase dimerisation domain H9L11_10360 PF01546 Peptidase family M20/M25/M40 H9L11_10365 PF00860 Permease family H9L11_10370 PF00156 Phosphoribosyl transferase domain H9L11_10375 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) H9L11_10380 PF07417 Sigma factor-binding transcriptional regulator Crl H9L11_10385 PF00696 Amino acid kinase family H9L11_10385 PF01472 PUA domain H9L11_10390 PF00171 Aldehyde dehydrogenase family H9L11_10395 PF03477 ATP cone domain H9L11_10400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9L11_10400 PF01872 RibD C-terminal domain H9L11_10405 PF00677 Lumazine binding domain H9L11_10410 PF00925 GTP cyclohydrolase II H9L11_10410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9L11_10415 PF00885 6,7-dimethyl-8-ribityllumazine synthase H9L11_10420 PF01029 NusB family H9L11_10425 PF02769 AIR synthase related protein, C-terminal domain H9L11_10425 PF00586 AIR synthase related protein, N-terminal domain H9L11_10430 PF04608 Phosphatidylglycerophosphatase A H9L11_10435 PF02780 Transketolase, C-terminal domain H9L11_10435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H9L11_10435 PF02779 Transketolase, pyrimidine binding domain H9L11_10440 PF00348 Polyprenyl synthetase H9L11_10445 PF02609 Exonuclease VII small subunit H9L11_10450 PF01618 MotA/TolQ/ExbB proton channel family H9L11_10455 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9L11_10455 PF00691 OmpA family H9L11_10460 PF02926 THUMP domain H9L11_10460 PF02568 Thiamine biosynthesis protein (ThiI) H9L11_10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_10465 PF03466 LysR substrate binding domain H9L11_10475 PF04241 Protein of unknown function (DUF423) H9L11_10480 PF01728 FtsJ-like methyltransferase H9L11_10480 PF18125 RlmM ferredoxin-like domain H9L11_10485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9L11_10485 PF01367 5'-3' exonuclease, C-terminal SAM fold H9L11_10490 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H9L11_10490 PF11892 Domain of unknown function (DUF3412) H9L11_10490 PF03641 Possible lysine decarboxylase H9L11_10495 PF00990 Diguanylate cyclase, GGDEF domain H9L11_10505 PF14489 QueF-like protein H9L11_10505 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H9L11_10510 PF07348 Syd protein (SUKH-2) H9L11_10515 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) H9L11_10520 PF03180 NLPA lipoprotein H9L11_10525 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_10530 PF09383 NIL domain H9L11_10530 PF00005 ABC transporter H9L11_10540 PF00356 Bacterial regulatory proteins, lacI family H9L11_10545 PF02378 Phosphotransferase system, EIIC H9L11_10545 PF00367 phosphotransferase system, EIIB H9L11_10550 PF00128 Alpha amylase, catalytic domain H9L11_10550 PF16657 Maltogenic Amylase, C-terminal domain H9L11_10565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H9L11_10565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9L11_10570 PF00464 Serine hydroxymethyltransferase H9L11_10575 PF04055 Radical SAM superfamily H9L11_10575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H9L11_10580 PF03099 Biotin/lipoate A/B protein ligase family H9L11_10585 PF04359 Protein of unknown function (DUF493) H9L11_10590 PF07943 Penicillin-binding protein 5, C-terminal domain H9L11_10590 PF00768 D-alanyl-D-alanine carboxypeptidase H9L11_10595 PF05036 Sporulation related domain H9L11_10595 PF03330 Lytic transglycolase H9L11_10600 PF01098 Cell cycle protein H9L11_10605 PF03717 Penicillin-binding Protein dimerisation domain H9L11_10605 PF00905 Penicillin binding protein transpeptidase domain H9L11_10610 PF02590 Predicted SPOUT methyltransferase H9L11_10620 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H9L11_10620 PF06144 DNA polymerase III, delta subunit H9L11_10625 PF04390 Lipopolysaccharide-assembly H9L11_10630 PF13603 Leucyl-tRNA synthetase, Domain 2 H9L11_10630 PF08264 Anticodon-binding domain of tRNA H9L11_10630 PF00133 tRNA synthetases class I (I, L, M and V) H9L11_10635 PF07295 Zinc-ribbon containing domain H9L11_10640 PF00795 Carbon-nitrogen hydrolase H9L11_10645 PF03471 Transporter associated domain H9L11_10645 PF00571 CBS domain H9L11_10650 PF02130 Uncharacterized protein family UPF0054 H9L11_10655 PF02562 PhoH-like protein H9L11_10660 PF04055 Radical SAM superfamily H9L11_10660 PF01938 TRAM domain H9L11_10660 PF00919 Uncharacterized protein family UPF0004 H9L11_10665 PF01494 FAD binding domain H9L11_10770 PF01926 50S ribosome-binding GTPase H9L11_10770 PF06071 Protein of unknown function (DUF933) H9L11_10775 PF01195 Peptidyl-tRNA hydrolase H9L11_10780 PF14572 Phosphoribosyl synthetase-associated domain H9L11_10780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H9L11_10785 PF08544 GHMP kinases C terminal H9L11_10785 PF00288 GHMP kinases N terminal domain H9L11_10790 PF03550 Outer membrane lipoprotein LolB H9L11_10795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H9L11_10795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H9L11_10795 PF01488 Shikimate / quinate 5-dehydrogenase H9L11_10800 PF03462 PCRF domain H9L11_10800 PF00472 RF-1 domain H9L11_10805 PF13847 Methyltransferase domain H9L11_10805 PF17827 PrmC N-terminal domain H9L11_10810 PF04247 Invasion gene expression up-regulator, SirB H9L11_10815 PF13369 Transglutaminase-like superfamily H9L11_10820 PF00793 DAHP synthetase I family H9L11_10825 PF00149 Calcineurin-like phosphoesterase H9L11_10825 PF02872 5'-nucleotidase, C-terminal domain H9L11_10830 PF04073 Aminoacyl-tRNA editing domain H9L11_10835 PF01479 S4 domain H9L11_10835 PF00849 RNA pseudouridylate synthase H9L11_10840 PF01713 Smr domain H9L11_10865 PF03173 Putative carbohydrate binding domain H9L11_10865 PF00728 Glycosyl hydrolase family 20, catalytic domain H9L11_10865 PF02838 Glycosyl hydrolase family 20, domain 2 H9L11_10865 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain H9L11_10880 PF00403 Heavy-metal-associated domain H9L11_10885 PF13609 Gram-negative porin H9L11_10890 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9L11_10895 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9L11_10900 PF01389 OmpA-like transmembrane domain H9L11_10900 PF00691 OmpA family H9L11_10940 PF01584 CheW-like domain H9L11_10940 PF00072 Response regulator receiver domain H9L11_10945 PF03705 CheR methyltransferase, all-alpha domain H9L11_10945 PF01739 CheR methyltransferase, SAM binding domain H9L11_10950 PF00460 Flagella basal body rod protein H9L11_10955 PF00460 Flagella basal body rod protein H9L11_10955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_10960 PF03963 Flagellar hook capping protein - N-terminal region H9L11_10960 PF13860 FlgD Ig-like domain H9L11_10960 PF13861 FlgD Tudor-like domain H9L11_10965 PF07559 Flagellar basal body protein FlaE H9L11_10965 PF00460 Flagella basal body rod protein H9L11_10965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_10970 PF00460 Flagella basal body rod protein H9L11_10970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_10975 PF00460 Flagella basal body rod protein H9L11_10975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_10980 PF02107 Flagellar L-ring protein H9L11_10985 PF02119 Flagellar P-ring protein H9L11_10990 PF10135 Rod binding protein H9L11_10990 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9L11_10995 PF07196 Flagellin hook IN motif H9L11_10995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_11000 PF00669 Bacterial flagellin N-terminal helical region H9L11_11005 PF00700 Bacterial flagellin C-terminal helical region H9L11_11005 PF07196 Flagellin hook IN motif H9L11_11005 PF00669 Bacterial flagellin N-terminal helical region H9L11_11010 PF00700 Bacterial flagellin C-terminal helical region H9L11_11010 PF07196 Flagellin hook IN motif H9L11_11010 PF00669 Bacterial flagellin N-terminal helical region H9L11_11015 PF00669 Bacterial flagellin N-terminal helical region H9L11_11015 PF07196 Flagellin hook IN motif H9L11_11015 PF00700 Bacterial flagellin C-terminal helical region H9L11_11020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9L11_11025 PF00391 PEP-utilising enzyme, mobile domain H9L11_11025 PF05524 PEP-utilising enzyme, N-terminal H9L11_11025 PF02896 PEP-utilising enzyme, TIM barrel domain H9L11_11030 PF00381 PTS HPr component phosphorylation site H9L11_11035 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_11045 PF04354 ZipA, C-terminal FtsZ-binding domain H9L11_11050 PF03120 NAD-dependent DNA ligase OB-fold domain H9L11_11050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H9L11_11050 PF00533 BRCA1 C Terminus (BRCT) domain H9L11_11050 PF12826 Helix-hairpin-helix motif H9L11_11050 PF01653 NAD-dependent DNA ligase adenylation domain H9L11_11055 PF03573 outer membrane porin, OprD family H9L11_11070 PF01145 SPFH domain / Band 7 family H9L11_11070 PF16200 C-terminal region of band_7 H9L11_11075 PF00085 Thioredoxin H9L11_11080 PF00106 short chain dehydrogenase H9L11_11085 PF08338 Domain of unknown function (DUF1731) H9L11_11085 PF01370 NAD dependent epimerase/dehydratase family H9L11_11090 PF07556 Protein of unknown function (DUF1538) H9L11_11095 PF07556 Protein of unknown function (DUF1538) H9L11_11115 PF12850 Calcineurin-like phosphoesterase superfamily domain H9L11_11130 PF17323 Trans-membrane regulatory protein ToxS H9L11_11135 PF00486 Transcriptional regulatory protein, C terminal H9L11_11140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_11140 PF00183 Hsp90 protein H9L11_11145 PF05191 Adenylate kinase, active site lid H9L11_11150 PF00762 Ferrochelatase H9L11_11155 PF00854 POT family H9L11_11160 PF02357 Transcription termination factor nusG H9L11_11165 PF00733 Asparagine synthase H9L11_11165 PF13537 Glutamine amidotransferase domain H9L11_11170 PF02254 TrkA-N domain H9L11_11170 PF00999 Sodium/hydrogen exchanger family H9L11_11175 PF00480 ROK family H9L11_11175 PF01047 MarR family H9L11_11180 PF01979 Amidohydrolase family H9L11_11185 PF02378 Phosphotransferase system, EIIC H9L11_11185 PF00367 phosphotransferase system, EIIB H9L11_11185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9L11_11190 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H9L11_11190 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9L11_11195 PF01475 Ferric uptake regulator family H9L11_11205 PF00258 Flavodoxin H9L11_11215 PF12697 Alpha/beta hydrolase family H9L11_11220 PF03925 SeqA protein C-terminal domain H9L11_11220 PF17206 SeqA protein N-terminal domain H9L11_11225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9L11_11225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9L11_11225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9L11_11225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9L11_11235 PF01784 NIF3 (NGG1p interacting factor 3) H9L11_11240 PF00285 Citrate synthase, C-terminal domain H9L11_11245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9L11_11250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9L11_11255 PF02910 Fumarate reductase flavoprotein C-term H9L11_11255 PF00890 FAD binding domain H9L11_11260 PF13085 2Fe-2S iron-sulfur cluster binding domain H9L11_11265 PF02779 Transketolase, pyrimidine binding domain H9L11_11265 PF16078 2-oxoglutarate dehydrogenase N-terminus H9L11_11265 PF00676 Dehydrogenase E1 component H9L11_11265 PF16870 2-oxoglutarate dehydrogenase C-terminal H9L11_11270 PF02817 e3 binding domain H9L11_11270 PF00364 Biotin-requiring enzyme H9L11_11270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9L11_11275 PF08442 ATP-grasp domain H9L11_11275 PF00549 CoA-ligase H9L11_11280 PF00549 CoA-ligase H9L11_11280 PF02629 CoA binding domain H9L11_11285 PF00950 ABC 3 transport family H9L11_11290 PF00005 ABC transporter H9L11_11295 PF01297 Zinc-uptake complex component A periplasmic H9L11_11300 PF12833 Helix-turn-helix domain H9L11_11300 PF02311 AraC-like ligand binding domain H9L11_11305 PF04023 FeoA domain H9L11_11310 PF07664 Ferrous iron transport protein B C terminus H9L11_11310 PF17910 FeoB cytosolic helical domain H9L11_11310 PF02421 Ferrous iron transport protein B H9L11_11310 PF07670 Nucleoside recognition H9L11_11330 PF00750 tRNA synthetases class I (R) H9L11_11330 PF05746 DALR anticodon binding domain H9L11_11330 PF03485 Arginyl tRNA synthetase N terminal domain H9L11_11335 PF06185 YecM protein H9L11_11340 PF01842 ACT domain H9L11_11340 PF00551 Formyl transferase H9L11_11345 PF13307 Helicase C-terminal domain H9L11_11345 PF04851 Type III restriction enzyme, res subunit H9L11_11350 PF00814 Glycoprotease family H9L11_11360 PF03843 Outer membrane lipoprotein Slp family H9L11_11365 PF00561 alpha/beta hydrolase fold H9L11_11370 PF00501 AMP-binding enzyme H9L11_11370 PF13193 AMP-binding enzyme C-terminal domain H9L11_11375 PF00570 HRDC domain H9L11_11375 PF01612 3'-5' exonuclease H9L11_11380 PF03776 Septum formation topological specificity factor MinE H9L11_11385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9L11_11390 PF05209 Septum formation inhibitor MinC, N-terminal domain H9L11_11390 PF03775 Septum formation inhibitor MinC, C-terminal domain H9L11_11395 PF05166 YcgL domain H9L11_11400 PF13406 Transglycosylase SLT domain H9L11_11405 PF03466 LysR substrate binding domain H9L11_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_11410 PF01773 Na+ dependent nucleoside transporter N-terminus H9L11_11410 PF07670 Nucleoside recognition H9L11_11410 PF07662 Na+ dependent nucleoside transporter C-terminus H9L11_11415 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H9L11_11415 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H9L11_11425 PF01209 ubiE/COQ5 methyltransferase family H9L11_11430 PF02801 Beta-ketoacyl synthase, C-terminal domain H9L11_11430 PF00109 Beta-ketoacyl synthase, N-terminal domain H9L11_11440 PF07977 FabA-like domain H9L11_11445 PF02801 Beta-ketoacyl synthase, C-terminal domain H9L11_11445 PF00109 Beta-ketoacyl synthase, N-terminal domain H9L11_11470 PF00221 Aromatic amino acid lyase H9L11_11475 PF00535 Glycosyl transferase family 2 H9L11_11480 PF07977 FabA-like domain H9L11_11495 PF00550 Phosphopantetheine attachment site H9L11_11500 PF00550 Phosphopantetheine attachment site H9L11_11525 PF04820 Tryptophan halogenase H9L11_11535 PF00270 DEAD/DEAH box helicase H9L11_11535 PF00271 Helicase conserved C-terminal domain H9L11_11540 PF02080 TrkA-C domain H9L11_11540 PF02254 TrkA-N domain H9L11_11545 PF02386 Cation transport protein H9L11_11560 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H9L11_11565 PF03480 Bacterial extracellular solute-binding protein, family 7 H9L11_11570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9L11_11575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9L11_11580 PF02954 Bacterial regulatory protein, Fis family H9L11_11580 PF00072 Response regulator receiver domain H9L11_11580 PF00158 Sigma-54 interaction domain H9L11_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_11585 PF02743 Cache domain H9L11_11585 PF00512 His Kinase A (phospho-acceptor) domain H9L11_11590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_11590 PF05697 Bacterial trigger factor protein (TF) H9L11_11590 PF05698 Bacterial trigger factor protein (TF) C-terminus H9L11_11595 PF00574 Clp protease H9L11_11600 PF07724 AAA domain (Cdc48 subfamily) H9L11_11600 PF10431 C-terminal, D2-small domain, of ClpB protein H9L11_11600 PF06689 ClpX C4-type zinc finger H9L11_11605 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_11605 PF05362 Lon protease (S16) C-terminal proteolytic domain H9L11_11605 PF02190 ATP-dependent protease La (LON) substrate-binding domain H9L11_11610 PF00216 Bacterial DNA-binding protein H9L11_11615 PF13145 PPIC-type PPIASE domain H9L11_11635 PF13286 Phosphohydrolase-associated domain H9L11_11635 PF01966 HD domain H9L11_11645 PF00155 Aminotransferase class I and II H9L11_11650 PF00425 chorismate binding enzyme H9L11_11655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9L11_11655 PF16582 Middle domain of thiamine pyrophosphate H9L11_11655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9L11_11660 PF12697 Alpha/beta hydrolase family H9L11_11665 PF00378 Enoyl-CoA hydratase/isomerase H9L11_11670 PF13378 Enolase C-terminal domain-like H9L11_11675 PF13193 AMP-binding enzyme C-terminal domain H9L11_11675 PF00501 AMP-binding enzyme H9L11_11685 PF03601 Conserved hypothetical protein 698 H9L11_11690 PF07690 Major Facilitator Superfamily H9L11_11735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_11735 PF00529 HlyD membrane-fusion protein of T1SS H9L11_11740 PF00873 AcrB/AcrD/AcrF family H9L11_11755 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_11760 PF13404 AsnC-type helix-turn-helix domain H9L11_11760 PF01037 Lrp/AsnC ligand binding domain H9L11_11775 PF09619 Type III secretion system lipoprotein chaperone (YscW) H9L11_11780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9L11_11790 PF00990 Diguanylate cyclase, GGDEF domain H9L11_11800 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9L11_11800 PF00588 SpoU rRNA Methylase family H9L11_11805 PF00478 IMP dehydrogenase / GMP reductase domain H9L11_11805 PF00571 CBS domain H9L11_11810 PF00403 Heavy-metal-associated domain H9L11_11815 PF01048 Phosphorylase superfamily H9L11_11825 PF00672 HAMP domain H9L11_11825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_11830 PF01230 HIT domain H9L11_11845 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9L11_11845 PF13036 Peptidoglycan-synthase activator LpoB H9L11_11850 PF01636 Phosphotransferase enzyme family H9L11_11855 PF05728 Uncharacterised protein family (UPF0227) H9L11_11860 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_11875 PF17757 UvrB interaction domain H9L11_11875 PF00271 Helicase conserved C-terminal domain H9L11_11875 PF00270 DEAD/DEAH box helicase H9L11_11875 PF03461 TRCF domain H9L11_11875 PF02559 CarD-like/TRCF domain H9L11_11885 PF02687 FtsX-like permease family H9L11_11885 PF12704 MacB-like periplasmic core domain H9L11_11890 PF00005 ABC transporter H9L11_11895 PF12704 MacB-like periplasmic core domain H9L11_11895 PF02687 FtsX-like permease family H9L11_11905 PF13567 Domain of unknown function (DUF4131) H9L11_11905 PF00753 Metallo-beta-lactamase superfamily H9L11_11905 PF03772 Competence protein H9L11_11920 PF00005 ABC transporter H9L11_11920 PF00664 ABC transporter transmembrane region H9L11_11925 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H9L11_11930 PF03966 Trm112p-like protein H9L11_11935 PF02348 Cytidylyltransferase H9L11_11940 PF04293 SpoVR like protein H9L11_11945 PF04285 Protein of unknown function (DUF444) H9L11_11950 PF08298 PrkA AAA domain H9L11_11950 PF06798 PrkA serine protein kinase C-terminal domain H9L11_11955 PF03887 YfbU domain H9L11_11965 PF04055 Radical SAM superfamily H9L11_11975 PF01228 Glycine radical H9L11_11975 PF02901 Pyruvate formate lyase-like H9L11_11990 PF00005 ABC transporter H9L11_11995 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_12000 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_12005 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_12015 PF03372 Endonuclease/Exonuclease/phosphatase family H9L11_12020 PF10689 Protein of unknown function (DUF2496) H9L11_12025 PF07445 Primosomal replication protein priC H9L11_12030 PF01925 Sulfite exporter TauE/SafE H9L11_12035 PF13307 Helicase C-terminal domain H9L11_12035 PF06733 DEAD_2 H9L11_12045 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9L11_12050 PF00849 RNA pseudouridylate synthase H9L11_12055 PF03971 Monomeric isocitrate dehydrogenase H9L11_12060 PF00313 'Cold-shock' DNA-binding domain H9L11_12065 PF02617 ATP-dependent Clp protease adaptor protein ClpS H9L11_12070 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_12070 PF07724 AAA domain (Cdc48 subfamily) H9L11_12070 PF17871 AAA lid domain H9L11_12070 PF10431 C-terminal, D2-small domain, of ClpB protein H9L11_12070 PF02861 Clp amino terminal domain, pathogenicity island component H9L11_12075 PF01176 Translation initiation factor 1A / IF-1 H9L11_12080 PF04377 Arginine-tRNA-protein transferase, C terminus H9L11_12080 PF04376 Arginine-tRNA-protein transferase, N terminus H9L11_12085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H9L11_12095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9L11_12100 PF10692 Protein of unknown function (DUF2498) H9L11_12105 PF01131 DNA topoisomerase H9L11_12105 PF01751 Toprim domain H9L11_12105 PF01396 Topoisomerase DNA binding C4 zinc finger H9L11_12105 PF08272 Topoisomerase I zinc-ribbon-like H9L11_12110 PF00483 Nucleotidyl transferase H9L11_12115 PF00534 Glycosyl transferases group 1 H9L11_12115 PF08323 Starch synthase catalytic domain H9L11_12135 PF04993 TfoX N-terminal domain H9L11_12135 PF04994 TfoX C-terminal domain H9L11_12140 PF00356 Bacterial regulatory proteins, lacI family H9L11_12145 PF02613 Nitrate reductase delta subunit H9L11_12150 PF00072 Response regulator receiver domain H9L11_12150 PF00486 Transcriptional regulatory protein, C terminal H9L11_12155 PF02698 DUF218 domain H9L11_12160 PF13847 Methyltransferase domain H9L11_12165 PF03882 MukF winged-helix domain H9L11_12165 PF17193 MukF C-terminal domain H9L11_12165 PF17192 MukF middle domain H9L11_12170 PF04288 MukE-like family H9L11_12175 PF04310 MukB N-terminal H9L11_12175 PF16330 MukB hinge domain H9L11_12195 PF08443 RimK-like ATP-grasp domain H9L11_12195 PF18030 RimK PreATP-grasp domain H9L11_12200 PF08003 Protein of unknown function (DUF1698) H9L11_12205 PF13649 Methyltransferase domain H9L11_12210 PF01904 Protein of unknown function DUF72 H9L11_12215 PF02938 GAD domain H9L11_12215 PF00152 tRNA synthetases class II (D, K and N) H9L11_12215 PF01336 OB-fold nucleic acid binding domain H9L11_12220 PF01709 Transcriptional regulator H9L11_12225 PF02075 Crossover junction endodeoxyribonuclease RuvC H9L11_12230 PF01330 RuvA N terminal domain H9L11_12230 PF07499 RuvA, C-terminal domain H9L11_12235 PF05496 Holliday junction DNA helicase RuvB P-loop domain H9L11_12235 PF17864 RuvB AAA lid domain H9L11_12235 PF05491 RuvB C-terminal winged helix domain H9L11_12240 PF01654 Cytochrome bd terminal oxidase subunit I H9L11_12245 PF02322 Cytochrome bd terminal oxidase subunit II H9L11_12250 PF08173 Membrane bound YbgT-like protein H9L11_12260 PF03061 Thioesterase superfamily H9L11_12265 PF01618 MotA/TolQ/ExbB proton channel family H9L11_12270 PF02472 Biopolymer transport protein ExbD/TolR H9L11_12280 PF07676 WD40-like Beta Propeller Repeat H9L11_12280 PF04052 TolB amino-terminal domain H9L11_12285 PF00691 OmpA family H9L11_12290 PF13174 Tetratricopeptide repeat H9L11_12290 PF16331 TolA binding protein trimerisation H9L11_12295 PF02445 Quinolinate synthetase A protein H9L11_12305 PF03994 Domain of Unknown Function (DUF350) H9L11_12315 PF03738 Glutathionylspermidine synthase preATP-grasp H9L11_12325 PF09308 LuxQ, periplasmic H9L11_12325 PF00512 His Kinase A (phospho-acceptor) domain H9L11_12325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_12325 PF00072 Response regulator receiver domain H9L11_12330 PF06610 L-alanine exporter H9L11_12350 PF01695 IstB-like ATP binding protein H9L11_12355 PF00665 Integrase core domain H9L11_12355 PF02796 Helix-turn-helix domain of resolvase H9L11_12365 PF00239 Resolvase, N terminal domain H9L11_12365 PF02796 Helix-turn-helix domain of resolvase H9L11_12370 PF13614 AAA domain H9L11_12375 PF02322 Cytochrome bd terminal oxidase subunit II H9L11_12380 PF01654 Cytochrome bd terminal oxidase subunit I H9L11_12395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_12395 PF12729 Four helix bundle sensory module for signal transduction H9L11_12395 PF00672 HAMP domain H9L11_12400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_12400 PF00529 HlyD membrane-fusion protein of T1SS H9L11_12405 PF00873 AcrB/AcrD/AcrF family H9L11_12420 PF00579 tRNA synthetases class I (W and Y) H9L11_12430 PF03372 Endonuclease/Exonuclease/phosphatase family H9L11_12440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_12440 PF00672 HAMP domain H9L11_12445 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H9L11_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_12455 PF03466 LysR substrate binding domain H9L11_12465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9L11_12465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9L11_12470 PF01037 Lrp/AsnC ligand binding domain H9L11_12475 PF01580 FtsK/SpoIIIE family H9L11_12475 PF17854 FtsK alpha domain H9L11_12475 PF09397 Ftsk gamma domain H9L11_12475 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H9L11_12480 PF03548 Outer membrane lipoprotein carrier protein LolA H9L11_12485 PF12002 MgsA AAA+ ATPase C terminal H9L11_12485 PF16193 AAA C-terminal domain H9L11_12485 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_12490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9L11_12490 PF02403 Seryl-tRNA synthetase N-terminal domain H9L11_12505 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9L11_12510 PF00202 Aminotransferase class-III H9L11_12515 PF06968 Biotin and Thiamin Synthesis associated domain H9L11_12515 PF04055 Radical SAM superfamily H9L11_12520 PF00155 Aminotransferase class I and II H9L11_12525 PF08241 Methyltransferase domain H9L11_12540 PF01435 Peptidase family M48 H9L11_12550 PF00106 short chain dehydrogenase H9L11_12575 PF16036 Chalcone isomerase-like H9L11_12585 PF08328 Adenylosuccinate lyase C-terminal H9L11_12585 PF00206 Lyase H9L11_12590 PF04356 Protein of unknown function (DUF489) H9L11_12605 PF00294 pfkB family carbohydrate kinase H9L11_12610 PF00816 H-NS histone family H9L11_12615 PF03553 Na+/H+ antiporter family H9L11_12620 PF08029 HisG, C-terminal domain H9L11_12620 PF01634 ATP phosphoribosyltransferase H9L11_12625 PF00815 Histidinol dehydrogenase H9L11_12630 PF00155 Aminotransferase class I and II H9L11_12635 PF00475 Imidazoleglycerol-phosphate dehydratase H9L11_12635 PF08645 Polynucleotide kinase 3 phosphatase H9L11_12640 PF00117 Glutamine amidotransferase class-I H9L11_12645 PF00977 Histidine biosynthesis protein H9L11_12650 PF00977 Histidine biosynthesis protein H9L11_12655 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H9L11_12655 PF01502 Phosphoribosyl-AMP cyclohydrolase H9L11_12660 PF02810 SEC-C motif H9L11_12665 PF08668 HDOD domain H9L11_12665 PF00563 EAL domain H9L11_12670 PF00149 Calcineurin-like phosphoesterase H9L11_12675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9L11_12680 PF01406 tRNA synthetases class I (C) catalytic domain H9L11_12680 PF09190 DALR domain H9L11_12685 PF00265 Thymidine kinase H9L11_12715 PF01226 Formate/nitrite transporter H9L11_12725 PF03649 Uncharacterised protein family (UPF0014) H9L11_12730 PF06796 Periplasmic nitrate reductase protein NapE H9L11_12735 PF03264 NapC/NirT cytochrome c family, N-terminal region H9L11_12740 PF00384 Molybdopterin oxidoreductase H9L11_12740 PF18364 Molybdopterin oxidoreductase N-terminal domain H9L11_12740 PF01568 Molydopterin dinucleotide binding domain H9L11_12745 PF16874 Glycosyl hydrolase family 36 C-terminal domain H9L11_12745 PF16875 Glycosyl hydrolase family 36 N-terminal domain H9L11_12755 PF01368 DHH family H9L11_12755 PF02833 DHHA2 domain H9L11_12765 PF00005 ABC transporter H9L11_12770 PF00005 ABC transporter H9L11_12770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_12775 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_12775 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_12780 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_12785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_12790 PF02954 Bacterial regulatory protein, Fis family H9L11_12790 PF00158 Sigma-54 interaction domain H9L11_12795 PF04012 PspA/IM30 family H9L11_12800 PF06667 Phage shock protein B H9L11_12805 PF04024 PspC domain H9L11_12815 PF13533 Biotin-lipoyl like H9L11_12820 PF00873 AcrB/AcrD/AcrF family H9L11_12825 PF03352 Methyladenine glycosylase H9L11_12830 PF03280 Proteobacterial lipase chaperone protein H9L11_12835 PF00561 alpha/beta hydrolase fold H9L11_12840 PF01053 Cys/Met metabolism PLP-dependent enzyme H9L11_12845 PF13396 Phospholipase_D-nuclease N-terminal H9L11_12845 PF13091 PLD-like domain H9L11_12850 PF00209 Sodium:neurotransmitter symporter family H9L11_12855 PF00849 RNA pseudouridylate synthase H9L11_12865 PF00970 Oxidoreductase FAD-binding domain H9L11_12865 PF00175 Oxidoreductase NAD-binding domain H9L11_12865 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_12870 PF03063 Prismane/CO dehydrogenase family H9L11_12875 PF00158 Sigma-54 interaction domain H9L11_12875 PF01590 GAF domain H9L11_12885 PF01066 CDP-alcohol phosphatidyltransferase H9L11_12890 PF00005 ABC transporter H9L11_12895 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_12900 PF13416 Bacterial extracellular solute-binding protein H9L11_12910 PF06945 Protein of unknown function (DUF1289) H9L11_12920 PF02872 5'-nucleotidase, C-terminal domain H9L11_12920 PF00149 Calcineurin-like phosphoesterase H9L11_12930 PF01386 Ribosomal L25p family H9L11_12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_12940 PF00486 Transcriptional regulatory protein, C terminal H9L11_12940 PF00072 Response regulator receiver domain H9L11_12950 PF00271 Helicase conserved C-terminal domain H9L11_12950 PF04851 Type III restriction enzyme, res subunit H9L11_12955 PF00849 RNA pseudouridylate synthase H9L11_12955 PF01479 S4 domain H9L11_12960 PF07690 Major Facilitator Superfamily H9L11_12970 PF11066 Protein of unknown function (DUF2867) H9L11_12970 PF13460 NAD(P)H-binding H9L11_12975 PF01554 MatE H9L11_12980 PF00005 ABC transporter H9L11_12995 PF06965 Na+/H+ antiporter 1 H9L11_13000 PF16295 Tetracyclin repressor-like, C-terminal domain H9L11_13000 PF00440 Bacterial regulatory proteins, tetR family H9L11_13005 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_13005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_13005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_13005 PF09317 Domain of unknown function (DUF1974) H9L11_13010 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9L11_13010 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9L11_13010 PF07055 Enoyl reductase FAD binding domain H9L11_13015 PF02080 TrkA-C domain H9L11_13015 PF06826 Predicted Permease Membrane Region H9L11_13020 PF00462 Glutaredoxin H9L11_13025 PF00465 Iron-containing alcohol dehydrogenase H9L11_13030 PF01380 SIS domain H9L11_13030 PF01418 Helix-turn-helix domain, rpiR family H9L11_13035 PF00282 Pyridoxal-dependent decarboxylase conserved domain H9L11_13045 PF03956 Lysine exporter LysO H9L11_13055 PF04994 TfoX C-terminal domain H9L11_13055 PF04993 TfoX N-terminal domain H9L11_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_13070 PF00512 His Kinase A (phospho-acceptor) domain H9L11_13070 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_13080 PF00266 Aminotransferase class-V H9L11_13085 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_13090 PF00664 ABC transporter transmembrane region H9L11_13090 PF00005 ABC transporter H9L11_13095 PF00664 ABC transporter transmembrane region H9L11_13095 PF00005 ABC transporter H9L11_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_13110 PF00266 Aminotransferase class-V H9L11_13120 PF00990 Diguanylate cyclase, GGDEF domain H9L11_13120 PF00072 Response regulator receiver domain H9L11_13125 PF00939 Sodium:sulfate symporter transmembrane region H9L11_13130 PF02698 DUF218 domain H9L11_13135 PF03949 Malic enzyme, NAD binding domain H9L11_13135 PF00390 Malic enzyme, N-terminal domain H9L11_13140 PF04408 Helicase associated domain (HA2) H9L11_13140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9L11_13140 PF00271 Helicase conserved C-terminal domain H9L11_13140 PF00270 DEAD/DEAH box helicase H9L11_13140 PF11898 Domain of unknown function (DUF3418) H9L11_13150 PF09423 PhoD-like phosphatase H9L11_13150 PF16655 PhoD-like phosphatase, N-terminal domain H9L11_13155 PF01259 SAICAR synthetase H9L11_13175 PF00691 OmpA family H9L11_13175 PF05736 OprF membrane domain H9L11_13190 PF13183 4Fe-4S dicluster domain H9L11_13190 PF02913 FAD linked oxidases, C-terminal domain H9L11_13190 PF01565 FAD binding domain H9L11_13195 PF04191 Phospholipid methyltransferase H9L11_13205 PF00221 Aromatic amino acid lyase H9L11_13210 PF17392 Urocanase C-terminal domain H9L11_13210 PF01175 Urocanase Rossmann-like domain H9L11_13210 PF17391 Urocanase N-terminal domain H9L11_13215 PF00491 Arginase family H9L11_13220 PF01979 Amidohydrolase family H9L11_13225 PF00392 Bacterial regulatory proteins, gntR family H9L11_13225 PF07702 UTRA domain H9L11_13240 PF02824 TGS domain H9L11_13240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9L11_13240 PF03129 Anticodon binding domain H9L11_13240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9L11_13245 PF00707 Translation initiation factor IF-3, C-terminal domain H9L11_13245 PF05198 Translation initiation factor IF-3, N-terminal domain H9L11_13250 PF01632 Ribosomal protein L35 H9L11_13255 PF00453 Ribosomal protein L20 H9L11_13260 PF01906 Putative heavy-metal-binding H9L11_13270 PF13358 DDE superfamily endonuclease H9L11_13305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H9L11_13305 PF01409 tRNA synthetases class II core domain (F) H9L11_13310 PF01588 Putative tRNA binding domain H9L11_13310 PF03147 Ferredoxin-fold anticodon binding domain H9L11_13310 PF03484 tRNA synthetase B5 domain H9L11_13310 PF03483 B3/4 domain H9L11_13310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H9L11_13320 PF00216 Bacterial DNA-binding protein H9L11_13330 PF05724 Thiopurine S-methyltransferase (TPMT) H9L11_13335 PF02222 ATP-grasp domain H9L11_13340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9L11_13340 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region H9L11_13345 PF04172 LrgB-like family H9L11_13350 PF03788 LrgA family H9L11_13355 PF00929 Exonuclease H9L11_13355 PF08411 Exonuclease C-terminal H9L11_13360 PF00375 Sodium:dicarboxylate symporter family H9L11_13365 PF13460 NAD(P)H-binding H9L11_13370 PF02277 Phosphoribosyltransferase H9L11_13375 PF02654 Cobalamin-5-phosphate synthase H9L11_13380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H9L11_13395 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9L11_13400 PF01032 FecCD transport family H9L11_13405 PF00005 ABC transporter H9L11_13425 PF03466 LysR substrate binding domain H9L11_13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_13435 PF01863 Protein of unknown function DUF45 H9L11_13440 PF05971 RNA methyltransferase H9L11_13460 PF00392 Bacterial regulatory proteins, gntR family H9L11_13465 PF00171 Aldehyde dehydrogenase family H9L11_13470 PF05544 Proline racemase H9L11_13475 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H9L11_13475 PF01266 FAD dependent oxidoreductase H9L11_13485 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9L11_13490 PF00701 Dihydrodipicolinate synthetase family H9L11_13495 PF08402 TOBE domain H9L11_13495 PF00005 ABC transporter H9L11_13500 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_13505 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_13515 PF01752 Collagenase H9L11_13515 PF08453 Peptidase family M9 N-terminal H9L11_13525 PF00005 ABC transporter H9L11_13525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_13530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_13530 PF00005 ABC transporter H9L11_13535 PF12911 N-terminal TM domain of oligopeptide transport permease C H9L11_13535 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_13540 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_13545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_13550 PF07687 Peptidase dimerisation domain H9L11_13550 PF01546 Peptidase family M20/M25/M40 H9L11_13555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_13560 PF04209 homogentisate 1,2-dioxygenase H9L11_13570 PF14497 Glutathione S-transferase, C-terminal domain H9L11_13570 PF02798 Glutathione S-transferase, N-terminal domain H9L11_13620 PF07007 Lysozyme inhibitor LprI H9L11_13645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H9L11_13660 PF03553 Na+/H+ antiporter family H9L11_13665 PF00120 Glutamine synthetase, catalytic domain H9L11_13670 PF07722 Peptidase C26 H9L11_13675 PF07883 Cupin domain H9L11_13675 PF01381 Helix-turn-helix H9L11_13680 PF00171 Aldehyde dehydrogenase family H9L11_13685 PF01266 FAD dependent oxidoreductase H9L11_13690 PF00795 Carbon-nitrogen hydrolase H9L11_13695 PF04371 Porphyromonas-type peptidyl-arginine deiminase H9L11_13700 PF00171 Aldehyde dehydrogenase family H9L11_13705 PF00202 Aminotransferase class-III H9L11_13710 PF12792 CSS motif domain associated with EAL H9L11_13710 PF00563 EAL domain H9L11_13720 PF01047 MarR family H9L11_13725 PF04237 YjbR H9L11_13750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_13750 PF00672 HAMP domain H9L11_13750 PF00512 His Kinase A (phospho-acceptor) domain H9L11_13750 PF01627 Hpt domain H9L11_13750 PF00072 Response regulator receiver domain H9L11_13750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9L11_13755 PF03707 Bacterial signalling protein N terminal repeat H9L11_13755 PF00990 Diguanylate cyclase, GGDEF domain H9L11_13755 PF00563 EAL domain H9L11_13770 PF04204 Homoserine O-succinyltransferase H9L11_13780 PF00893 Small Multidrug Resistance protein H9L11_13785 PF03279 Bacterial lipid A biosynthesis acyltransferase H9L11_13795 PF07508 Recombinase H9L11_13795 PF13408 Recombinase zinc beta ribbon domain H9L11_13795 PF00239 Resolvase, N terminal domain H9L11_13825 PF02796 Helix-turn-helix domain of resolvase H9L11_13825 PF00239 Resolvase, N terminal domain H9L11_13910 PF02074 Carboxypeptidase Taq (M32) metallopeptidase H9L11_13915 PF01810 LysE type translocator H9L11_13925 PF01235 Sodium:alanine symporter family H9L11_13950 PF00884 Sulfatase H9L11_13955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9L11_13960 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_13965 PF00571 CBS domain H9L11_13965 PF00005 ABC transporter H9L11_13980 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_13985 PF00583 Acetyltransferase (GNAT) family H9L11_13990 PF00202 Aminotransferase class-III H9L11_13995 PF06339 Ectoine synthase H9L11_14000 PF13840 ACT domain H9L11_14000 PF00696 Amino acid kinase family H9L11_14005 PF00884 Sulfatase H9L11_14015 PF03781 Sulfatase-modifying factor enzyme 1 H9L11_14020 PF13186 Iron-sulfur cluster-binding domain H9L11_14020 PF04055 Radical SAM superfamily H9L11_14035 PF00884 Sulfatase H9L11_14040 PF00884 Sulfatase H9L11_14050 PF03412 Peptidase C39 family H9L11_14050 PF00005 ABC transporter H9L11_14050 PF00664 ABC transporter transmembrane region H9L11_14060 PF02321 Outer membrane efflux protein H9L11_14075 PF08220 DeoR-like helix-turn-helix domain H9L11_14075 PF00455 DeoR C terminal sensor domain H9L11_14080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H9L11_14080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9L11_14085 PF03928 Haem-degrading H9L11_14090 PF00072 Response regulator receiver domain H9L11_14090 PF00990 Diguanylate cyclase, GGDEF domain H9L11_14110 PF00939 Sodium:sulfate symporter transmembrane region H9L11_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_14115 PF00512 His Kinase A (phospho-acceptor) domain H9L11_14120 PF00072 Response regulator receiver domain H9L11_14120 PF00158 Sigma-54 interaction domain H9L11_14120 PF02954 Bacterial regulatory protein, Fis family H9L11_14125 PF03707 Bacterial signalling protein N terminal repeat H9L11_14125 PF00990 Diguanylate cyclase, GGDEF domain H9L11_14125 PF00563 EAL domain H9L11_14130 PF01966 HD domain H9L11_14130 PF11871 Domain of unknown function (DUF3391) H9L11_14135 PF01810 LysE type translocator H9L11_14140 PF11230 Protein of unknown function (DUF3029) H9L11_14145 PF04055 Radical SAM superfamily H9L11_14155 PF03741 Integral membrane protein TerC family H9L11_14165 PF01966 HD domain H9L11_14170 PF00465 Iron-containing alcohol dehydrogenase H9L11_14175 PF03222 Tryptophan/tyrosine permease family H9L11_14180 PF11871 Domain of unknown function (DUF3391) H9L11_14180 PF01966 HD domain H9L11_14190 PF00005 ABC transporter H9L11_14195 PF01497 Periplasmic binding protein H9L11_14200 PF01032 FecCD transport family H9L11_14205 PF00593 TonB dependent receptor H9L11_14205 PF07715 TonB-dependent Receptor Plug Domain H9L11_14215 PF00664 ABC transporter transmembrane region H9L11_14215 PF00005 ABC transporter H9L11_14220 PF00664 ABC transporter transmembrane region H9L11_14220 PF00005 ABC transporter H9L11_14225 PF07963 Prokaryotic N-terminal methylation motif H9L11_14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_14235 PF03466 LysR substrate binding domain H9L11_14245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H9L11_14245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9L11_14260 PF00012 Hsp70 protein H9L11_14265 PF00012 Hsp70 protein H9L11_14275 PF00990 Diguanylate cyclase, GGDEF domain H9L11_14310 PF02525 Flavodoxin-like fold H9L11_14315 PF11898 Domain of unknown function (DUF3418) H9L11_14315 PF00270 DEAD/DEAH box helicase H9L11_14315 PF04408 Helicase associated domain (HA2) H9L11_14315 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9L11_14315 PF00271 Helicase conserved C-terminal domain H9L11_14330 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_14340 PF02397 Bacterial sugar transferase H9L11_14350 PF13439 Glycosyltransferase Family 4 H9L11_14350 PF00534 Glycosyl transferases group 1 H9L11_14380 PF00534 Glycosyl transferases group 1 H9L11_14380 PF13439 Glycosyltransferase Family 4 H9L11_14385 PF13439 Glycosyltransferase Family 4 H9L11_14385 PF00534 Glycosyl transferases group 1 H9L11_14390 PF02954 Bacterial regulatory protein, Fis family H9L11_14390 PF00158 Sigma-54 interaction domain H9L11_14390 PF00072 Response regulator receiver domain H9L11_14405 PF02563 Polysaccharide biosynthesis/export protein H9L11_14405 PF10531 SLBB domain H9L11_14415 PF01740 STAS domain H9L11_14420 PF01068 ATP dependent DNA ligase domain H9L11_14420 PF14743 DNA ligase OB-like domain H9L11_14430 PF01554 MatE H9L11_14435 PF00677 Lumazine binding domain H9L11_14445 PF03881 Fructosamine kinase H9L11_14450 PF01339 CheB methylesterase H9L11_14450 PF00072 Response regulator receiver domain H9L11_14455 PF00990 Diguanylate cyclase, GGDEF domain H9L11_14455 PF05230 MASE2 domain H9L11_14465 PF00877 NlpC/P60 family H9L11_14495 PF03942 DTW domain H9L11_14500 PF00480 ROK family H9L11_14510 PF03453 MoeA N-terminal region (domain I and II) H9L11_14510 PF00994 Probable molybdopterin binding domain H9L11_14510 PF03454 MoeA C-terminal region (domain IV) H9L11_14515 PF12804 MobA-like NTP transferase domain H9L11_14520 PF08402 TOBE domain H9L11_14520 PF00005 ABC transporter H9L11_14525 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_14530 PF12849 PBP superfamily domain H9L11_14535 PF00158 Sigma-54 interaction domain H9L11_14535 PF00072 Response regulator receiver domain H9L11_14535 PF02954 Bacterial regulatory protein, Fis family H9L11_14540 PF00989 PAS fold H9L11_14540 PF00512 His Kinase A (phospho-acceptor) domain H9L11_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_14545 PF12848 ABC transporter H9L11_14545 PF00005 ABC transporter H9L11_14550 PF02634 FdhD/NarQ family H9L11_14570 PF02613 Nitrate reductase delta subunit H9L11_14580 PF01568 Molydopterin dinucleotide binding domain H9L11_14580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9L11_14580 PF00384 Molybdopterin oxidoreductase H9L11_14585 PF13247 4Fe-4S dicluster domain H9L11_14600 PF03527 RHS protein H9L11_14600 PF05593 RHS Repeat H9L11_14720 PF00909 Ammonium Transporter Family H9L11_14730 PF02146 Sir2 family H9L11_14735 PF13333 Integrase core domain H9L11_14735 PF00665 Integrase core domain H9L11_14735 PF13276 HTH-like domain H9L11_14745 PF01695 IstB-like ATP binding protein H9L11_14750 PF00665 Integrase core domain H9L11_14750 PF02796 Helix-turn-helix domain of resolvase H9L11_14760 PF13416 Bacterial extracellular solute-binding protein H9L11_14765 PF13416 Bacterial extracellular solute-binding protein H9L11_14770 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_14775 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_14780 PF08402 TOBE domain H9L11_14780 PF00005 ABC transporter H9L11_14800 PF01171 PP-loop family H9L11_14805 PF00582 Universal stress protein family H9L11_14810 PF13545 Crp-like helix-turn-helix domain H9L11_14810 PF00027 Cyclic nucleotide-binding domain H9L11_14825 PF00403 Heavy-metal-associated domain H9L11_14835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9L11_14835 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H9L11_14850 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9L11_15010 PF17414 MatP C-terminal ribbon-helix-helix domain H9L11_15010 PF06303 MatP N-terminal domain H9L11_15015 PF13654 AAA domain H9L11_15015 PF05362 Lon protease (S16) C-terminal proteolytic domain H9L11_15020 PF07977 FabA-like domain H9L11_15025 PF04957 Ribosome modulation factor H9L11_15035 PF12848 ABC transporter H9L11_15035 PF16326 ABC transporter C-terminal domain H9L11_15035 PF00005 ABC transporter H9L11_15045 PF02926 THUMP domain H9L11_15045 PF01170 Putative RNA methylase family UPF0020 H9L11_15045 PF10672 S-adenosylmethionine-dependent methyltransferase H9L11_15050 PF07126 Cell-division protein ZapC H9L11_15055 PF01180 Dihydroorotate dehydrogenase H9L11_15060 PF05088 Bacterial NAD-glutamate dehydrogenase H9L11_15070 PF01433 Peptidase family M1 domain H9L11_15070 PF11940 Domain of unknown function (DUF3458) Ig-like fold H9L11_15070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H9L11_15080 PF17804 Tail specific protease N-terminal domain H9L11_15080 PF00595 PDZ domain H9L11_15080 PF11818 C-terminal domain of tail specific protease (DUF3340) H9L11_15080 PF03572 Peptidase family S41 H9L11_15085 PF17516 ProQ C-terminal domain H9L11_15085 PF04352 ProQ/FINO family H9L11_15090 PF13185 GAF domain H9L11_15095 PF00005 ABC transporter H9L11_15095 PF00664 ABC transporter transmembrane region H9L11_15100 PF04403 Paraquat-inducible protein A H9L11_15105 PF02470 MlaD protein H9L11_15110 PF01189 16S rRNA methyltransferase RsmB/F H9L11_15110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H9L11_15110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF H9L11_15130 PF00793 DAHP synthetase I family H9L11_15135 PF04461 Protein of unknown function (DUF520) H9L11_15140 PF14824 Sirohaem biosynthesis protein central H9L11_15140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9L11_15140 PF10414 Sirohaem synthase dimerisation region H9L11_15145 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_15150 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_15155 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_15160 PF00005 ABC transporter H9L11_15165 PF01027 Inhibitor of apoptosis-promoting Bax1 H9L11_15175 PF04358 DsrC like protein H9L11_15180 PF00708 Acylphosphatase H9L11_15185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_15185 PF17200 Single Cache domain 2 H9L11_15185 PF00672 HAMP domain H9L11_15190 PF17785 PUA-like domain H9L11_15190 PF10672 S-adenosylmethionine-dependent methyltransferase H9L11_15210 PF00691 OmpA family H9L11_15225 PF00691 OmpA family H9L11_15225 PF05736 OprF membrane domain H9L11_15235 PF13185 GAF domain H9L11_15235 PF00990 Diguanylate cyclase, GGDEF domain H9L11_15240 PF01614 Bacterial transcriptional regulator H9L11_15240 PF09339 IclR helix-turn-helix domain H9L11_15250 PF00248 Aldo/keto reductase family H9L11_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15255 PF03466 LysR substrate binding domain H9L11_15265 PF03466 LysR substrate binding domain H9L11_15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15270 PF07690 Major Facilitator Superfamily H9L11_15280 PF08659 KR domain H9L11_15280 PF00550 Phosphopantetheine attachment site H9L11_15280 PF14765 Polyketide synthase dehydratase H9L11_15280 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_15280 PF00107 Zinc-binding dehydrogenase H9L11_15280 PF16197 Ketoacyl-synthetase C-terminal extension H9L11_15280 PF00109 Beta-ketoacyl synthase, N-terminal domain H9L11_15280 PF02801 Beta-ketoacyl synthase, C-terminal domain H9L11_15280 PF00698 Acyl transferase domain H9L11_15285 PF12833 Helix-turn-helix domain H9L11_15285 PF02311 AraC-like ligand binding domain H9L11_15290 PF00857 Isochorismatase family H9L11_15295 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_15305 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_15305 PF00107 Zinc-binding dehydrogenase H9L11_15310 PF02310 B12 binding domain H9L11_15310 PF02574 Homocysteine S-methyltransferase H9L11_15310 PF02607 B12 binding domain H9L11_15310 PF00809 Pterin binding enzyme H9L11_15310 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9L11_15315 PF00005 ABC transporter H9L11_15320 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_15325 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_15335 PF00267 Gram-negative porin H9L11_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15340 PF03466 LysR substrate binding domain H9L11_15350 PF00873 AcrB/AcrD/AcrF family H9L11_15355 PF03466 LysR substrate binding domain H9L11_15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15360 PF03466 LysR substrate binding domain H9L11_15365 PF01810 LysE type translocator H9L11_15375 PF06508 Queuosine biosynthesis protein QueC H9L11_15380 PF04055 Radical SAM superfamily H9L11_15395 PF00089 Trypsin H9L11_15405 PF13193 AMP-binding enzyme C-terminal domain H9L11_15405 PF16177 Acetyl-coenzyme A synthetase N-terminus H9L11_15405 PF00501 AMP-binding enzyme H9L11_15410 PF04303 PrpF protein H9L11_15415 PF00694 Aconitase C-terminal domain H9L11_15415 PF00330 Aconitase family (aconitate hydratase) H9L11_15420 PF00285 Citrate synthase, C-terminal domain H9L11_15450 PF01970 Tripartite tricarboxylate transporter TctA family H9L11_15460 PF01925 Sulfite exporter TauE/SafE H9L11_15465 PF16868 NMT1-like family H9L11_15470 PF00709 Adenylosuccinate synthetase H9L11_15475 PF00710 Asparaginase, N-terminal H9L11_15475 PF17763 Glutaminase/Asparaginase C-terminal domain H9L11_15480 PF03618 Kinase/pyrophosphorylase H9L11_15485 PF00391 PEP-utilising enzyme, mobile domain H9L11_15485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H9L11_15485 PF02896 PEP-utilising enzyme, TIM barrel domain H9L11_15495 PF00196 Bacterial regulatory proteins, luxR family H9L11_15495 PF00072 Response regulator receiver domain H9L11_15500 PF00579 tRNA synthetases class I (W and Y) H9L11_15505 PF13416 Bacterial extracellular solute-binding protein H9L11_15515 PF03466 LysR substrate binding domain H9L11_15515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15520 PF13533 Biotin-lipoyl like H9L11_15525 PF00873 AcrB/AcrD/AcrF family H9L11_15540 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9L11_15540 PF00703 Glycosyl hydrolases family 2 H9L11_15540 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H9L11_15540 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9L11_15545 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_15550 PF00392 Bacterial regulatory proteins, gntR family H9L11_15550 PF07702 UTRA domain H9L11_15575 PF00005 ABC transporter H9L11_15575 PF08402 TOBE domain H9L11_15595 PF00873 AcrB/AcrD/AcrF family H9L11_15615 PF00873 AcrB/AcrD/AcrF family H9L11_15620 PF13533 Biotin-lipoyl like H9L11_15625 PF13091 PLD-like domain H9L11_15650 PF00376 MerR family regulatory protein H9L11_15650 PF09278 MerR, DNA binding H9L11_15660 PF03466 LysR substrate binding domain H9L11_15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15670 PF13378 Enolase C-terminal domain-like H9L11_15670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H9L11_15675 PF14492 Elongation Factor G, domain II H9L11_15675 PF00679 Elongation factor G C-terminus H9L11_15675 PF03764 Elongation factor G, domain IV H9L11_15675 PF00009 Elongation factor Tu GTP binding domain H9L11_15675 PF03144 Elongation factor Tu domain 2 H9L11_15700 PF02001 Protein of unknown function DUF134 H9L11_15705 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_15710 PF00571 CBS domain H9L11_15710 PF00005 ABC transporter H9L11_15715 PF04170 NlpE N-terminal domain H9L11_15715 PF17185 NlpE C-terminal OB domain H9L11_15720 PF06629 MltA-interacting protein MipA H9L11_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15735 PF03466 LysR substrate binding domain H9L11_15760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H9L11_15760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H9L11_15770 PF00857 Isochorismatase family H9L11_15785 PF00455 DeoR C terminal sensor domain H9L11_15785 PF08220 DeoR-like helix-turn-helix domain H9L11_15790 PF01641 SelR domain H9L11_15790 PF01625 Peptide methionine sulfoxide reductase H9L11_15795 PF03060 Nitronate monooxygenase H9L11_15800 PF13520 Amino acid permease H9L11_15805 PF05985 Ethanolamine ammonia-lyase light chain (EutC) H9L11_15810 PF06751 Ethanolamine ammonia lyase large subunit (EutB) H9L11_15815 PF12833 Helix-turn-helix domain H9L11_15820 PF00440 Bacterial regulatory proteins, tetR family H9L11_15820 PF08359 YsiA-like protein, C-terminal region H9L11_15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_15835 PF03466 LysR substrate binding domain H9L11_15840 PF01810 LysE type translocator H9L11_15850 PF00118 TCP-1/cpn60 chaperonin family H9L11_15855 PF00166 Chaperonin 10 Kd subunit H9L11_15860 PF00581 Rhodanese-like domain H9L11_15875 PF01070 FMN-dependent dehydrogenase H9L11_15895 PF00669 Bacterial flagellin N-terminal helical region H9L11_15900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_15900 PF00460 Flagella basal body rod protein H9L11_15905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9L11_15905 PF10135 Rod binding protein H9L11_15910 PF02119 Flagellar P-ring protein H9L11_15915 PF02107 Flagellar L-ring protein H9L11_15920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_15920 PF00460 Flagella basal body rod protein H9L11_15925 PF00460 Flagella basal body rod protein H9L11_15925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_15930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_15930 PF07559 Flagellar basal body protein FlaE H9L11_15930 PF00460 Flagella basal body rod protein H9L11_15935 PF13861 FlgD Tudor-like domain H9L11_15935 PF03963 Flagellar hook capping protein - N-terminal region H9L11_15935 PF13860 FlgD Ig-like domain H9L11_15940 PF00460 Flagella basal body rod protein H9L11_15940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9L11_15945 PF00460 Flagella basal body rod protein H9L11_15965 PF01464 Transglycosylase SLT domain H9L11_15965 PF01476 LysM domain H9L11_15970 PF08264 Anticodon-binding domain of tRNA H9L11_15970 PF00133 tRNA synthetases class I (I, L, M and V) H9L11_15990 PF03315 Serine dehydratase beta chain H9L11_15990 PF03313 Serine dehydratase alpha chain H9L11_16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16000 PF03466 LysR substrate binding domain H9L11_16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16005 PF03466 LysR substrate binding domain H9L11_16010 PF00691 OmpA family H9L11_16010 PF01389 OmpA-like transmembrane domain H9L11_16015 PF18027 Cytosolic carboxypeptidase N-terminal domain H9L11_16015 PF00246 Zinc carboxypeptidase H9L11_16020 PF01266 FAD dependent oxidoreductase H9L11_16030 PF04393 Protein of unknown function (DUF535) H9L11_16045 PF00392 Bacterial regulatory proteins, gntR family H9L11_16045 PF07702 UTRA domain H9L11_16050 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_16055 PF00005 ABC transporter H9L11_16065 PF00266 Aminotransferase class-V H9L11_16070 PF00202 Aminotransferase class-III H9L11_16075 PF13419 Haloacid dehalogenase-like hydrolase H9L11_16080 PF00356 Bacterial regulatory proteins, lacI family H9L11_16085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9L11_16095 PF03611 PTS system sugar-specific permease component H9L11_16105 PF05922 Peptidase inhibitor I9 H9L11_16105 PF00082 Subtilase family H9L11_16110 PF00657 GDSL-like Lipase/Acylhydrolase H9L11_16115 PF00440 Bacterial regulatory proteins, tetR family H9L11_16125 PF02321 Outer membrane efflux protein H9L11_16130 PF02687 FtsX-like permease family H9L11_16130 PF00005 ABC transporter H9L11_16130 PF12704 MacB-like periplasmic core domain H9L11_16135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_16140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9L11_16145 PF00194 Eukaryotic-type carbonic anhydrase H9L11_16150 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9L11_16165 PF13419 Haloacid dehalogenase-like hydrolase H9L11_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16170 PF03466 LysR substrate binding domain H9L11_16200 PF12464 Maltose acetyltransferase H9L11_16200 PF14602 Hexapeptide repeat of succinyl-transferase H9L11_16205 PF02566 OsmC-like protein H9L11_16210 PF01641 SelR domain H9L11_16210 PF01625 Peptide methionine sulfoxide reductase H9L11_16225 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H9L11_16230 PF00875 DNA photolyase H9L11_16230 PF03441 FAD binding domain of DNA photolyase H9L11_16235 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16250 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16250 PF05230 MASE2 domain H9L11_16265 PF01773 Na+ dependent nucleoside transporter N-terminus H9L11_16265 PF07662 Na+ dependent nucleoside transporter C-terminus H9L11_16265 PF07670 Nucleoside recognition H9L11_16285 PF01212 Beta-eliminating lyase H9L11_16290 PF03116 NQR2, RnfD, RnfE family H9L11_16295 PF01654 Cytochrome bd terminal oxidase subunit I H9L11_16300 PF02322 Cytochrome bd terminal oxidase subunit II H9L11_16315 PF04229 GrpB protein H9L11_16320 PF01266 FAD dependent oxidoreductase H9L11_16340 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16345 PF02954 Bacterial regulatory protein, Fis family H9L11_16345 PF00072 Response regulator receiver domain H9L11_16345 PF00158 Sigma-54 interaction domain H9L11_16350 PF00512 His Kinase A (phospho-acceptor) domain H9L11_16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_16355 PF00232 Glycosyl hydrolase family 1 H9L11_16370 PF03466 LysR substrate binding domain H9L11_16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16380 PF12706 Beta-lactamase superfamily domain H9L11_16390 PF08443 RimK-like ATP-grasp domain H9L11_16390 PF18030 RimK PreATP-grasp domain H9L11_16395 PF08443 RimK-like ATP-grasp domain H9L11_16395 PF18030 RimK PreATP-grasp domain H9L11_16400 PF00753 Metallo-beta-lactamase superfamily H9L11_16405 PF17810 Arginine decarboxylase helical bundle domain H9L11_16405 PF17944 Arginine decarboxylase C-terminal helical extension H9L11_16405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9L11_16410 PF00491 Arginase family H9L11_16415 PF07690 Major Facilitator Superfamily H9L11_16420 PF00326 Prolyl oligopeptidase family H9L11_16420 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9L11_16435 PF00950 ABC 3 transport family H9L11_16440 PF00005 ABC transporter H9L11_16445 PF01297 Zinc-uptake complex component A periplasmic H9L11_16490 PF02472 Biopolymer transport protein ExbD/TolR H9L11_16495 PF01618 MotA/TolQ/ExbB proton channel family H9L11_16500 PF01618 MotA/TolQ/ExbB proton channel family H9L11_16510 PF00593 TonB dependent receptor H9L11_16510 PF07715 TonB-dependent Receptor Plug Domain H9L11_16515 PF00672 HAMP domain H9L11_16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_16515 PF00512 His Kinase A (phospho-acceptor) domain H9L11_16515 PF16750 Sensor domain of 2-component histidine kinase H9L11_16520 PF00072 Response regulator receiver domain H9L11_16520 PF00486 Transcriptional regulatory protein, C terminal H9L11_16525 PF03009 Glycerophosphoryl diester phosphodiesterase family H9L11_16535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9L11_16535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9L11_16540 PF10928 Protein of unknown function (DUF2810) H9L11_16575 PF03707 Bacterial signalling protein N terminal repeat H9L11_16575 PF00563 EAL domain H9L11_16575 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16675 PF04013 Putative SAM-dependent RNA methyltransferase H9L11_16680 PF01523 Putative modulator of DNA gyrase H9L11_16685 PF01523 Putative modulator of DNA gyrase H9L11_16690 PF08543 Phosphomethylpyrimidine kinase H9L11_16695 PF00005 ABC transporter H9L11_16700 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_16705 PF09084 NMT1/THI5 like H9L11_16710 PF03070 TENA/THI-4/PQQC family H9L11_16715 PF02110 Hydroxyethylthiazole kinase family H9L11_16720 PF02581 Thiamine monophosphate synthase H9L11_16730 PF01568 Molydopterin dinucleotide binding domain H9L11_16730 PF18364 Molybdopterin oxidoreductase N-terminal domain H9L11_16730 PF00384 Molybdopterin oxidoreductase H9L11_16735 PF03264 NapC/NirT cytochrome c family, N-terminal region H9L11_16740 PF13302 Acetyltransferase (GNAT) domain H9L11_16760 PF00583 Acetyltransferase (GNAT) family H9L11_16780 PF00155 Aminotransferase class I and II H9L11_16780 PF00392 Bacterial regulatory proteins, gntR family H9L11_16785 PF02595 Glycerate kinase family H9L11_16790 PF02447 GntP family permease H9L11_16795 PF05651 Putative sugar diacid recognition H9L11_16795 PF13556 PucR C-terminal helix-turn-helix domain H9L11_16795 PF17853 GGDEF-like domain H9L11_16830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_16835 PF12706 Beta-lactamase superfamily domain H9L11_16845 PF07690 Major Facilitator Superfamily H9L11_16850 PF13533 Biotin-lipoyl like H9L11_16855 PF03922 OmpW family H9L11_16860 PF13599 Pentapeptide repeats (9 copies) H9L11_16880 PF01037 Lrp/AsnC ligand binding domain H9L11_16885 PF01810 LysE type translocator H9L11_16890 PF04954 Siderophore-interacting protein H9L11_16890 PF08021 Siderophore-interacting FAD-binding domain H9L11_16895 PF03466 LysR substrate binding domain H9L11_16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16900 PF00797 N-acetyltransferase H9L11_16905 PF00107 Zinc-binding dehydrogenase H9L11_16905 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_16910 PF00756 Putative esterase H9L11_16920 PF17152 Periplasmic sensor domain H9L11_16920 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_16935 PF03466 LysR substrate binding domain H9L11_16950 PF00849 RNA pseudouridylate synthase H9L11_16955 PF01554 MatE H9L11_16960 PF00563 EAL domain H9L11_16960 PF00990 Diguanylate cyclase, GGDEF domain H9L11_16960 PF03707 Bacterial signalling protein N terminal repeat H9L11_16970 PF06865 Pyrimidine/purine nucleoside phosphorylase H9L11_16980 PF08329 Chitinase A, N-terminal domain H9L11_16980 PF00704 Glycosyl hydrolases family 18 H9L11_16985 PF12697 Alpha/beta hydrolase family H9L11_17000 PF03600 Citrate transporter H9L11_17010 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9L11_17020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9L11_17020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9L11_17025 PF02805 Metal binding domain of Ada H9L11_17025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9L11_17025 PF12833 Helix-turn-helix domain H9L11_17025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9L11_17035 PF07681 DoxX H9L11_17040 PF02678 Pirin H9L11_17040 PF17954 Quercetinase C-terminal cupin domain H9L11_17045 PF03466 LysR substrate binding domain H9L11_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_17060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9L11_17070 PF03616 Sodium/glutamate symporter H9L11_17075 PF00155 Aminotransferase class I and II H9L11_17075 PF00392 Bacterial regulatory proteins, gntR family H9L11_17080 PF00005 ABC transporter H9L11_17090 PF03616 Sodium/glutamate symporter H9L11_17105 PF00672 HAMP domain H9L11_17105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_17105 PF17200 Single Cache domain 2 H9L11_17110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9L11_17120 PF00072 Response regulator receiver domain H9L11_17120 PF04397 LytTr DNA-binding domain H9L11_17125 PF07694 5TMR of 5TMR-LYT H9L11_17125 PF13492 GAF domain H9L11_17125 PF06580 Histidine kinase H9L11_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_17145 PF00005 ABC transporter H9L11_17155 PF01098 Cell cycle protein H9L11_17160 PF01709 Transcriptional regulator H9L11_17170 PF00512 His Kinase A (phospho-acceptor) domain H9L11_17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_17170 PF01627 Hpt domain H9L11_17170 PF00072 Response regulator receiver domain H9L11_17170 PF00672 HAMP domain H9L11_17170 PF17149 Periplasmic sensor domain found in signal transduction proteins H9L11_17180 PF08719 Domain of unknown function (DUF1768) H9L11_17180 PF00925 GTP cyclohydrolase II H9L11_17190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_17190 PF00005 ABC transporter H9L11_17195 PF00005 ABC transporter H9L11_17195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_17210 PF18607 ParA helix turn helix domain H9L11_17210 PF13614 AAA domain H9L11_17215 PF02195 ParB-like nuclease domain H9L11_17215 PF08775 ParB family H9L11_17220 PF13718 GNAT acetyltransferase 2 H9L11_17220 PF05127 Helicase H9L11_17230 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_17235 PF03466 LysR substrate binding domain H9L11_17240 PF00267 Gram-negative porin H9L11_17245 PF02378 Phosphotransferase system, EIIC H9L11_17245 PF00367 phosphotransferase system, EIIB H9L11_17250 PF01380 SIS domain H9L11_17255 PF01380 SIS domain H9L11_17255 PF01418 Helix-turn-helix domain, rpiR family H9L11_17260 PF00246 Zinc carboxypeptidase H9L11_17265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_17270 PF03358 NADPH-dependent FMN reductase H9L11_17290 PF03412 Peptidase C39 family H9L11_17290 PF00664 ABC transporter transmembrane region H9L11_17290 PF00005 ABC transporter H9L11_17305 PF00529 HlyD membrane-fusion protein of T1SS H9L11_17310 PF00158 Sigma-54 interaction domain H9L11_17310 PF00072 Response regulator receiver domain H9L11_17310 PF02954 Bacterial regulatory protein, Fis family H9L11_17315 PF02743 Cache domain H9L11_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_17315 PF00512 His Kinase A (phospho-acceptor) domain H9L11_17320 PF01243 Pyridoxamine 5'-phosphate oxidase H9L11_17320 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H9L11_17330 PF12833 Helix-turn-helix domain H9L11_17335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H9L11_17335 PF14850 DNA-binding domain of Proline dehydrogenase H9L11_17335 PF00171 Aldehyde dehydrogenase family H9L11_17335 PF01619 Proline dehydrogenase H9L11_17345 PF00474 Sodium:solute symporter family H9L11_17370 PF01037 Lrp/AsnC ligand binding domain H9L11_17380 PF00005 ABC transporter H9L11_17380 PF00664 ABC transporter transmembrane region H9L11_17390 PF00271 Helicase conserved C-terminal domain H9L11_17390 PF00270 DEAD/DEAH box helicase H9L11_17395 PF03475 3-alpha domain H9L11_17395 PF03473 MOSC domain H9L11_17415 PF08281 Sigma-70, region 4 H9L11_17415 PF04542 Sigma-70 region 2 H9L11_17420 PF01965 DJ-1/PfpI family H9L11_17420 PF12833 Helix-turn-helix domain H9L11_17425 PF03466 LysR substrate binding domain H9L11_17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_17440 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_17440 PF13192 Thioredoxin domain H9L11_17445 PF00578 AhpC/TSA family H9L11_17445 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9L11_17450 PF01047 MarR family H9L11_17455 PF02566 OsmC-like protein H9L11_17490 PF12704 MacB-like periplasmic core domain H9L11_17490 PF02687 FtsX-like permease family H9L11_17495 PF00005 ABC transporter H9L11_17505 PF01136 Peptidase family U32 H9L11_17515 PF00367 phosphotransferase system, EIIB H9L11_17515 PF02378 Phosphotransferase system, EIIC H9L11_17520 PF00486 Transcriptional regulatory protein, C terminal H9L11_17520 PF00072 Response regulator receiver domain H9L11_17525 PF00512 His Kinase A (phospho-acceptor) domain H9L11_17525 PF08521 Two-component sensor kinase N-terminal H9L11_17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_17530 PF01547 Bacterial extracellular solute-binding protein H9L11_17535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9L11_17535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9L11_17540 PF06276 Ferric iron reductase FhuF-like transporter H9L11_17540 PF04183 IucA / IucC family H9L11_17550 PF04183 IucA / IucC family H9L11_17550 PF06276 Ferric iron reductase FhuF-like transporter H9L11_17555 PF00206 Lyase H9L11_17555 PF02655 ATP-grasp domain H9L11_17560 PF00593 TonB dependent receptor H9L11_17560 PF07715 TonB-dependent Receptor Plug Domain H9L11_17565 PF07660 Secretin and TonB N terminus short domain H9L11_17565 PF00593 TonB dependent receptor H9L11_17565 PF07715 TonB-dependent Receptor Plug Domain H9L11_17570 PF01497 Periplasmic binding protein H9L11_17575 PF01032 FecCD transport family H9L11_17580 PF01032 FecCD transport family H9L11_17585 PF00005 ABC transporter H9L11_17590 PF00672 HAMP domain H9L11_17590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_17590 PF17200 Single Cache domain 2 H9L11_17595 PF05193 Peptidase M16 inactive domain H9L11_17595 PF00675 Insulinase (Peptidase family M16) H9L11_17605 PF04225 Opacity-associated protein A LysM-like domain H9L11_17605 PF01551 Peptidase family M23 H9L11_17620 PF07690 Major Facilitator Superfamily H9L11_17625 PF02796 Helix-turn-helix domain of resolvase H9L11_17625 PF00239 Resolvase, N terminal domain H9L11_17630 PF00356 Bacterial regulatory proteins, lacI family H9L11_17635 PF00474 Sodium:solute symporter family H9L11_17650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9L11_17650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9L11_17655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9L11_17655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9L11_17660 PF03480 Bacterial extracellular solute-binding protein, family 7 H9L11_17665 PF00356 Bacterial regulatory proteins, lacI family H9L11_17670 PF03328 HpcH/HpaI aldolase/citrate lyase family H9L11_17675 PF00815 Histidinol dehydrogenase H9L11_17690 PF12697 Alpha/beta hydrolase family H9L11_17705 PF07690 Major Facilitator Superfamily H9L11_17710 PF00474 Sodium:solute symporter family H9L11_17715 PF03315 Serine dehydratase beta chain H9L11_17715 PF03313 Serine dehydratase alpha chain H9L11_17720 PF00128 Alpha amylase, catalytic domain H9L11_17720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9L11_17725 PF02264 LamB porin H9L11_17740 PF00128 Alpha amylase, catalytic domain H9L11_17740 PF02903 Alpha amylase, N-terminal ig-like domain H9L11_17740 PF16657 Maltogenic Amylase, C-terminal domain H9L11_17745 PF04231 Endonuclease I H9L11_17750 PF17967 Pullulanase N2 domain H9L11_17750 PF11852 Domain of unknown function (DUF3372) H9L11_17750 PF03714 Bacterial pullanase-associated domain H9L11_17750 PF18494 Pullulanase Ins domain H9L11_17750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9L11_17765 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9L11_17765 PF01276 Orn/Lys/Arg decarboxylase, major domain H9L11_17765 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9L11_17770 PF13520 Amino acid permease H9L11_17780 PF08543 Phosphomethylpyrimidine kinase H9L11_17785 PF00375 Sodium:dicarboxylate symporter family H9L11_17790 PF03193 RsgA GTPase H9L11_17795 PF00367 phosphotransferase system, EIIB H9L11_17795 PF02378 Phosphotransferase system, EIIC H9L11_17800 PF02630 SCO1/SenC H9L11_17815 PF17874 MalT-like TPR region H9L11_17815 PF00196 Bacterial regulatory proteins, luxR family H9L11_17820 PF00343 Carbohydrate phosphorylase H9L11_17825 PF02446 4-alpha-glucanotransferase H9L11_17830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9L11_17830 PF00128 Alpha amylase, catalytic domain H9L11_17830 PF02806 Alpha amylase, C-terminal all-beta domain H9L11_17835 PF00912 Transglycosylase H9L11_17840 PF00128 Alpha amylase, catalytic domain H9L11_17855 PF07670 Nucleoside recognition H9L11_17860 PF07670 Nucleoside recognition H9L11_17865 PF01546 Peptidase family M20/M25/M40 H9L11_17865 PF07687 Peptidase dimerisation domain H9L11_17870 PF06803 Protein of unknown function (DUF1232) H9L11_17885 PF00375 Sodium:dicarboxylate symporter family H9L11_17895 PF03466 LysR substrate binding domain H9L11_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_17900 PF08803 Putative mono-oxygenase ydhR H9L11_17910 PF02706 Chain length determinant protein H9L11_17910 PF13807 G-rich domain on putative tyrosine kinase H9L11_17910 PF13614 AAA domain H9L11_17915 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9L11_17920 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H9L11_17920 PF10531 SLBB domain H9L11_17920 PF02563 Polysaccharide biosynthesis/export protein H9L11_17925 PF00881 Nitroreductase family H9L11_17930 PF01914 MarC family integral membrane protein H9L11_17935 PF01734 Patatin-like phospholipase H9L11_17940 PF18416 N-acetylglucosamine binding protein domain 2 H9L11_17940 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9L11_17945 PF02469 Fasciclin domain H9L11_17950 PF03441 FAD binding domain of DNA photolyase H9L11_17950 PF00875 DNA photolyase H9L11_17960 PF17773 UPF0176 acylphosphatase like domain H9L11_17960 PF00581 Rhodanese-like domain H9L11_17965 PF00561 alpha/beta hydrolase fold H9L11_17970 PF07943 Penicillin-binding protein 5, C-terminal domain H9L11_17970 PF00768 D-alanyl-D-alanine carboxypeptidase H9L11_17975 PF00686 Starch binding domain H9L11_17975 PF00128 Alpha amylase, catalytic domain H9L11_17980 PF12833 Helix-turn-helix domain H9L11_17980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9L11_17985 PF00881 Nitroreductase family H9L11_17995 PF03466 LysR substrate binding domain H9L11_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18000 PF09905 DNA-binding protein VF530 H9L11_18010 PF00970 Oxidoreductase FAD-binding domain H9L11_18010 PF00175 Oxidoreductase NAD-binding domain H9L11_18020 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9L11_18025 PF01594 AI-2E family transporter H9L11_18035 PF13533 Biotin-lipoyl like H9L11_18050 PF04632 Fusaric acid resistance protein family H9L11_18055 PF00892 EamA-like transporter family H9L11_18060 PF03466 LysR substrate binding domain H9L11_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18065 PF07690 Major Facilitator Superfamily H9L11_18075 PF00583 Acetyltransferase (GNAT) family H9L11_18085 PF00072 Response regulator receiver domain H9L11_18085 PF00486 Transcriptional regulatory protein, C terminal H9L11_18090 PF00672 HAMP domain H9L11_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_18090 PF00512 His Kinase A (phospho-acceptor) domain H9L11_18105 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9L11_18110 PF04055 Radical SAM superfamily H9L11_18115 PF01228 Glycine radical H9L11_18115 PF02901 Pyruvate formate lyase-like H9L11_18135 PF08000 Bacterial PH domain H9L11_18145 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9L11_18145 PF00691 OmpA family H9L11_18150 PF01618 MotA/TolQ/ExbB proton channel family H9L11_18155 PF04545 Sigma-70, region 4 H9L11_18155 PF04542 Sigma-70 region 2 H9L11_18160 PF03748 Flagellar basal body-associated protein FliL H9L11_18175 PF02561 Flagellar protein FliS H9L11_18180 PF07196 Flagellin hook IN motif H9L11_18180 PF07195 Flagellar hook-associated protein 2 C-terminus H9L11_18180 PF02465 Flagellar hook-associated protein 2 N-terminus H9L11_18190 PF00700 Bacterial flagellin C-terminal helical region H9L11_18190 PF00669 Bacterial flagellin N-terminal helical region H9L11_18200 PF00771 FHIPEP family H9L11_18205 PF01312 FlhB HrpN YscU SpaS Family H9L11_18210 PF01311 Bacterial export proteins, family 1 H9L11_18215 PF01313 Bacterial export proteins, family 3 H9L11_18220 PF00813 FliP family H9L11_18225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9L11_18240 PF00072 Response regulator receiver domain H9L11_18240 PF02954 Bacterial regulatory protein, Fis family H9L11_18240 PF00158 Sigma-54 interaction domain H9L11_18245 PF02049 Flagellar hook-basal body complex protein FliE H9L11_18250 PF01514 Secretory protein of YscJ/FliF family H9L11_18250 PF08345 Flagellar M-ring protein C-terminal H9L11_18255 PF14841 FliG middle domain H9L11_18255 PF14842 FliG N-terminal domain H9L11_18255 PF01706 FliG C-terminal domain H9L11_18265 PF18269 T3SS EscN ATPase C-terminal domain H9L11_18265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9L11_18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18280 PF03466 LysR substrate binding domain H9L11_18315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18320 PF03466 LysR substrate binding domain H9L11_18340 PF00486 Transcriptional regulatory protein, C terminal H9L11_18340 PF00072 Response regulator receiver domain H9L11_18345 PF08448 PAS fold H9L11_18345 PF13426 PAS domain H9L11_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_18345 PF00512 His Kinase A (phospho-acceptor) domain H9L11_18345 PF00072 Response regulator receiver domain H9L11_18350 PF00080 Copper/zinc superoxide dismutase (SODC) H9L11_18365 PF03707 Bacterial signalling protein N terminal repeat H9L11_18365 PF00563 EAL domain H9L11_18365 PF00990 Diguanylate cyclase, GGDEF domain H9L11_18365 PF13188 PAS domain H9L11_18370 PF00155 Aminotransferase class I and II H9L11_18375 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_18375 PF00107 Zinc-binding dehydrogenase H9L11_18405 PF00194 Eukaryotic-type carbonic anhydrase H9L11_18410 PF00924 Mechanosensitive ion channel H9L11_18420 PF01070 FMN-dependent dehydrogenase H9L11_18425 PF02652 L-lactate permease H9L11_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18430 PF03466 LysR substrate binding domain H9L11_18435 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9L11_18435 PF00326 Prolyl oligopeptidase family H9L11_18440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_18440 PF00005 ABC transporter H9L11_18450 PF05362 Lon protease (S16) C-terminal proteolytic domain H9L11_18450 PF13654 AAA domain H9L11_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_18455 PF12729 Four helix bundle sensory module for signal transduction H9L11_18455 PF00672 HAMP domain H9L11_18460 PF13609 Gram-negative porin H9L11_18465 PF12945 Flagellar protein YcgR H9L11_18465 PF07238 PilZ domain H9L11_18480 PF00583 Acetyltransferase (GNAT) family H9L11_18485 PF12838 4Fe-4S dicluster domain H9L11_18485 PF12800 4Fe-4S binding domain H9L11_18490 PF13237 4Fe-4S dicluster domain H9L11_18490 PF12801 4Fe-4S binding domain H9L11_18510 PF12558 ATP-binding cassette cobalt transporter H9L11_18510 PF00005 ABC transporter H9L11_18515 PF07155 ECF-type riboflavin transporter, S component H9L11_18520 PF00529 HlyD membrane-fusion protein of T1SS H9L11_18520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_18525 PF11742 Protein of unknown function (DUF3302) H9L11_18530 PF00990 Diguanylate cyclase, GGDEF domain H9L11_18545 PF01048 Phosphorylase superfamily H9L11_18550 PF08349 Protein of unknown function (DUF1722) H9L11_18555 PF13411 MerR HTH family regulatory protein H9L11_18560 PF00875 DNA photolyase H9L11_18560 PF03441 FAD binding domain of DNA photolyase H9L11_18565 PF01476 LysM domain H9L11_18565 PF03734 L,D-transpeptidase catalytic domain H9L11_18565 PF17969 L,D-transpeptidase C-terminal domain H9L11_18575 PF00271 Helicase conserved C-terminal domain H9L11_18575 PF00270 DEAD/DEAH box helicase H9L11_18580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9L11_18580 PF00326 Prolyl oligopeptidase family H9L11_18585 PF07715 TonB-dependent Receptor Plug Domain H9L11_18585 PF00593 TonB dependent receptor H9L11_18605 PF00672 HAMP domain H9L11_18605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_18610 PF12849 PBP superfamily domain H9L11_18615 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_18620 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_18625 PF00005 ABC transporter H9L11_18645 PF13519 von Willebrand factor type A domain H9L11_18655 PF01882 Protein of unknown function DUF58 H9L11_18660 PF17863 AAA lid domain H9L11_18660 PF07726 ATPase family associated with various cellular activities (AAA) H9L11_18665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_18665 PF02743 Cache domain H9L11_18665 PF00672 HAMP domain H9L11_18675 PF00196 Bacterial regulatory proteins, luxR family H9L11_18680 PF00196 Bacterial regulatory proteins, luxR family H9L11_18690 PF00005 ABC transporter H9L11_18690 PF00664 ABC transporter transmembrane region H9L11_18695 PF00529 HlyD membrane-fusion protein of T1SS H9L11_18705 PF01032 FecCD transport family H9L11_18710 PF01497 Periplasmic binding protein H9L11_18715 PF00005 ABC transporter H9L11_18720 PF07715 TonB-dependent Receptor Plug Domain H9L11_18720 PF00593 TonB dependent receptor H9L11_18725 PF00005 ABC transporter H9L11_18725 PF00664 ABC transporter transmembrane region H9L11_18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_18730 PF02702 Osmosensitive K+ channel His kinase sensor domain H9L11_18730 PF00512 His Kinase A (phospho-acceptor) domain H9L11_18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_18730 PF13493 Domain of unknown function (DUF4118) H9L11_18730 PF02702 Osmosensitive K+ channel His kinase sensor domain H9L11_18730 PF00512 His Kinase A (phospho-acceptor) domain H9L11_18730 PF13493 Domain of unknown function (DUF4118) H9L11_18735 PF00072 Response regulator receiver domain H9L11_18735 PF00486 Transcriptional regulatory protein, C terminal H9L11_18740 PF02254 TrkA-N domain H9L11_18740 PF02080 TrkA-C domain H9L11_18745 PF02386 Cation transport protein H9L11_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_18750 PF03466 LysR substrate binding domain H9L11_18755 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_18760 PF00355 Rieske [2Fe-2S] domain H9L11_18760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H9L11_18765 PF00171 Aldehyde dehydrogenase family H9L11_18770 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_18770 PF18113 Rubredoxin binding C-terminal domain H9L11_18775 PF01266 FAD dependent oxidoreductase H9L11_18785 PF00127 Copper binding proteins, plastocyanin/azurin family H9L11_18790 PF13419 Haloacid dehalogenase-like hydrolase H9L11_18800 PF00158 Sigma-54 interaction domain H9L11_18800 PF01590 GAF domain H9L11_18805 PF00258 Flavodoxin H9L11_18805 PF00753 Metallo-beta-lactamase superfamily H9L11_18805 PF00301 Rubredoxin H9L11_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_18810 PF18113 Rubredoxin binding C-terminal domain H9L11_18820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9L11_18820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_18825 PF00199 Catalase H9L11_18825 PF06628 Catalase-related immune-responsive H9L11_18830 PF13417 Glutathione S-transferase, N-terminal domain H9L11_18835 PF00107 Zinc-binding dehydrogenase H9L11_18835 PF16884 N-terminal domain of oxidoreductase H9L11_18840 PF16925 Tetracyclin repressor-like, C-terminal domain H9L11_18840 PF00440 Bacterial regulatory proteins, tetR family H9L11_18845 PF04266 ASCH domain H9L11_18875 PF00534 Glycosyl transferases group 1 H9L11_18875 PF13439 Glycosyltransferase Family 4 H9L11_18885 PF13807 G-rich domain on putative tyrosine kinase H9L11_18885 PF02706 Chain length determinant protein H9L11_18885 PF13614 AAA domain H9L11_18900 PF02397 Bacterial sugar transferase H9L11_18905 PF08402 TOBE domain H9L11_18905 PF00005 ABC transporter H9L11_18910 PF01547 Bacterial extracellular solute-binding protein H9L11_18915 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_18915 PF14785 Maltose transport system permease protein MalF P2 domain H9L11_18920 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_18945 PF00664 ABC transporter transmembrane region H9L11_18945 PF00005 ABC transporter H9L11_18950 PF08021 Siderophore-interacting FAD-binding domain H9L11_18950 PF00005 ABC transporter H9L11_18950 PF04954 Siderophore-interacting protein H9L11_18950 PF00664 ABC transporter transmembrane region H9L11_18955 PF00593 TonB dependent receptor H9L11_18955 PF07715 TonB-dependent Receptor Plug Domain H9L11_18960 PF01497 Periplasmic binding protein H9L11_18965 PF01032 FecCD transport family H9L11_18970 PF01032 FecCD transport family H9L11_18980 PF05661 Protein of unknown function (DUF808) H9L11_18985 PF01979 Amidohydrolase family H9L11_18990 PF01679 Proteolipid membrane potential modulator H9L11_18995 PF03476 MOSC N-terminal beta barrel domain H9L11_18995 PF03476 MOSC N-terminal beta barrel domain H9L11_18995 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_18995 PF00111 2Fe-2S iron-sulfur cluster binding domain H9L11_18995 PF03473 MOSC domain H9L11_18995 PF03473 MOSC domain H9L11_19000 PF02540 NAD synthase H9L11_19005 PF01467 Cytidylyltransferase-like H9L11_19045 PF00005 ABC transporter H9L11_19050 PF01032 FecCD transport family H9L11_19060 PF02472 Biopolymer transport protein ExbD/TolR H9L11_19065 PF01618 MotA/TolQ/ExbB proton channel family H9L11_19070 PF03544 Gram-negative bacterial TonB protein C-terminal H9L11_19075 PF04055 Radical SAM superfamily H9L11_19080 PF06228 Haem utilisation ChuX/HutX H9L11_19085 PF01243 Pyridoxamine 5'-phosphate oxidase H9L11_19095 PF01584 CheW-like domain H9L11_19095 PF00072 Response regulator receiver domain H9L11_19105 PF01554 MatE H9L11_19110 PF00005 ABC transporter H9L11_19110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_19115 PF00005 ABC transporter H9L11_19115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9L11_19120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_19125 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_19130 PF00455 DeoR C terminal sensor domain H9L11_19130 PF08220 DeoR-like helix-turn-helix domain H9L11_19135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9L11_19135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_19140 PF07005 Sugar-binding N-terminal domain H9L11_19140 PF17042 Nucleotide-binding C-terminal domain H9L11_19145 PF00596 Class II Aldolase and Adducin N-terminal domain H9L11_19150 PF01261 Xylose isomerase-like TIM barrel H9L11_19155 PF01370 NAD dependent epimerase/dehydratase family H9L11_19160 PF02447 GntP family permease H9L11_19165 PF02583 Metal-sensitive transcriptional repressor H9L11_19170 PF03824 High-affinity nickel-transport protein H9L11_19175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_19175 PF00672 HAMP domain H9L11_19175 PF02743 Cache domain H9L11_19180 PF03466 LysR substrate binding domain H9L11_19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19185 PF01039 Carboxyl transferase domain H9L11_19185 PF17848 Acetyl-coA carboxylase zinc finger domain H9L11_19195 PF04151 Bacterial pre-peptidase C-terminal domain H9L11_19195 PF01752 Collagenase H9L11_19195 PF08453 Peptidase family M9 N-terminal H9L11_19205 PF02627 Carboxymuconolactone decarboxylase family H9L11_19210 PF13411 MerR HTH family regulatory protein H9L11_19215 PF00128 Alpha amylase, catalytic domain H9L11_19230 PF00999 Sodium/hydrogen exchanger family H9L11_19230 PF02254 TrkA-N domain H9L11_19235 PF02525 Flavodoxin-like fold H9L11_19240 PF00582 Universal stress protein family H9L11_19245 PF16326 ABC transporter C-terminal domain H9L11_19245 PF12848 ABC transporter H9L11_19245 PF00005 ABC transporter H9L11_19250 PF00326 Prolyl oligopeptidase family H9L11_19250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9L11_19260 PF13533 Biotin-lipoyl like H9L11_19265 PF00873 AcrB/AcrD/AcrF family H9L11_19270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9L11_19280 PF13302 Acetyltransferase (GNAT) domain H9L11_19290 PF17151 Periplasmic sensor domain H9L11_19290 PF00990 Diguanylate cyclase, GGDEF domain H9L11_19305 PF00873 AcrB/AcrD/AcrF family H9L11_19310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_19325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H9L11_19325 PF01568 Molydopterin dinucleotide binding domain H9L11_19325 PF12838 4Fe-4S dicluster domain H9L11_19325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9L11_19325 PF00384 Molybdopterin oxidoreductase H9L11_19340 PF00005 ABC transporter H9L11_19355 PF01161 Phosphatidylethanolamine-binding protein H9L11_19365 PF01758 Sodium Bile acid symporter family H9L11_19380 PF01638 HxlR-like helix-turn-helix H9L11_19400 PF03466 LysR substrate binding domain H9L11_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19405 PF00248 Aldo/keto reductase family H9L11_19410 PF03928 Haem-degrading H9L11_19430 PF03222 Tryptophan/tyrosine permease family H9L11_19440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_19440 PF00672 HAMP domain H9L11_19440 PF02743 Cache domain H9L11_19445 PF07670 Nucleoside recognition H9L11_19465 PF08525 Opacity-associated protein A N-terminal motif H9L11_19465 PF01476 LysM domain H9L11_19465 PF01551 Peptidase family M23 H9L11_19470 PF08447 PAS fold H9L11_19470 PF08448 PAS fold H9L11_19470 PF00990 Diguanylate cyclase, GGDEF domain H9L11_19470 PF00563 EAL domain H9L11_19475 PF03466 LysR substrate binding domain H9L11_19475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19480 PF07690 Major Facilitator Superfamily H9L11_19490 PF00462 Glutaredoxin H9L11_19495 PF00892 EamA-like transporter family H9L11_19500 PF00267 Gram-negative porin H9L11_19510 PF01557 Fumarylacetoacetate (FAA) hydrolase family H9L11_19530 PF01810 LysE type translocator H9L11_19540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9L11_19540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9L11_19540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9L11_19540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9L11_19545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9L11_19545 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H9L11_19550 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9L11_19555 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H9L11_19560 PF00510 Cytochrome c oxidase subunit III H9L11_19580 PF02628 Cytochrome oxidase assembly protein H9L11_19585 PF01040 UbiA prenyltransferase family H9L11_19590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9L11_19590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9L11_19600 PF00691 OmpA family H9L11_19600 PF05736 OprF membrane domain H9L11_19620 PF00313 'Cold-shock' DNA-binding domain H9L11_19625 PF03889 Alternative ribosome-rescue factor A H9L11_19630 PF00990 Diguanylate cyclase, GGDEF domain H9L11_19635 PF00140 Sigma-70 factor, region 1.2 H9L11_19635 PF04545 Sigma-70, region 4 H9L11_19635 PF04542 Sigma-70 region 2 H9L11_19635 PF04539 Sigma-70 region 3 H9L11_19645 PF00664 ABC transporter transmembrane region H9L11_19645 PF00005 ABC transporter H9L11_19650 PF00664 ABC transporter transmembrane region H9L11_19650 PF00005 ABC transporter H9L11_19655 PF02321 Outer membrane efflux protein H9L11_19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_19660 PF00072 Response regulator receiver domain H9L11_19665 PF13533 Biotin-lipoyl like H9L11_19685 PF12729 Four helix bundle sensory module for signal transduction H9L11_19685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_19685 PF00672 HAMP domain H9L11_19690 PF00210 Ferritin-like domain H9L11_19700 PF07995 Glucose / Sorbosone dehydrogenase H9L11_19705 PF00465 Iron-containing alcohol dehydrogenase H9L11_19720 PF00892 EamA-like transporter family H9L11_19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19730 PF03466 LysR substrate binding domain H9L11_19740 PF13193 AMP-binding enzyme C-terminal domain H9L11_19740 PF00501 AMP-binding enzyme H9L11_19745 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H9L11_19750 PF01329 Pterin 4 alpha carbinolamine dehydratase H9L11_19770 PF12843 Putative quorum-sensing-regulated virulence factor H9L11_19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19780 PF03466 LysR substrate binding domain H9L11_19785 PF07690 Major Facilitator Superfamily H9L11_19790 PF00270 DEAD/DEAH box helicase H9L11_19790 PF00271 Helicase conserved C-terminal domain H9L11_19795 PF09905 DNA-binding protein VF530 H9L11_19805 PF00291 Pyridoxal-phosphate dependent enzyme H9L11_19810 PF00313 'Cold-shock' DNA-binding domain H9L11_19820 PF01470 Pyroglutamyl peptidase H9L11_19830 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9L11_19830 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9L11_19835 PF00271 Helicase conserved C-terminal domain H9L11_19835 PF00270 DEAD/DEAH box helicase H9L11_19855 PF12792 CSS motif domain associated with EAL H9L11_19855 PF00563 EAL domain H9L11_19860 PF00005 ABC transporter H9L11_19865 PF00672 HAMP domain H9L11_19865 PF12729 Four helix bundle sensory module for signal transduction H9L11_19865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_19875 PF01575 MaoC like domain H9L11_19880 PF12849 PBP superfamily domain H9L11_19890 PF12833 Helix-turn-helix domain H9L11_19895 PF00575 S1 RNA binding domain H9L11_19895 PF08206 Ribonuclease B OB domain H9L11_19895 PF00773 RNB domain H9L11_19900 PF00271 Helicase conserved C-terminal domain H9L11_19900 PF03880 DbpA RNA binding domain H9L11_19900 PF00270 DEAD/DEAH box helicase H9L11_19910 PF00871 Acetokinase family H9L11_19915 PF03466 LysR substrate binding domain H9L11_19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_19920 PF12146 Serine aminopeptidase, S33 H9L11_19925 PF12146 Serine aminopeptidase, S33 H9L11_19940 PF01925 Sulfite exporter TauE/SafE H9L11_19955 PF01475 Ferric uptake regulator family H9L11_19960 PF01979 Amidohydrolase family H9L11_19965 PF00132 Bacterial transferase hexapeptide (six repeats) H9L11_19970 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9L11_19970 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9L11_19980 PF01476 LysM domain H9L11_19980 PF08525 Opacity-associated protein A N-terminal motif H9L11_19980 PF01551 Peptidase family M23 H9L11_19985 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9L11_19985 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9L11_19990 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9L11_19990 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9L11_19995 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9L11_20000 PF01914 MarC family integral membrane protein H9L11_20015 PF08447 PAS fold H9L11_20015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_20015 PF13426 PAS domain H9L11_20025 PF00682 HMGL-like H9L11_20030 PF00378 Enoyl-CoA hydratase/isomerase H9L11_20035 PF01039 Carboxyl transferase domain H9L11_20040 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_20040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_20040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_20045 PF00376 MerR family regulatory protein H9L11_20045 PF09278 MerR, DNA binding H9L11_20050 PF00108 Thiolase, N-terminal domain H9L11_20050 PF02803 Thiolase, C-terminal domain H9L11_20055 PF00171 Aldehyde dehydrogenase family H9L11_20060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_20060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_20060 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_20065 PF00378 Enoyl-CoA hydratase/isomerase H9L11_20070 PF00378 Enoyl-CoA hydratase/isomerase H9L11_20075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9L11_20075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_20085 PF06481 COX Aromatic Rich Motif H9L11_20085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9L11_20090 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9L11_20095 PF00510 Cytochrome c oxidase subunit III H9L11_20105 PF01040 UbiA prenyltransferase family H9L11_20110 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_20110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9L11_20125 PF00171 Aldehyde dehydrogenase family H9L11_20135 PF02028 BCCT, betaine/carnitine/choline family transporter H9L11_20165 PF00005 ABC transporter H9L11_20170 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_20175 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_20180 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_20190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_20190 PF03466 LysR substrate binding domain H9L11_20195 PF00043 Glutathione S-transferase, C-terminal domain H9L11_20195 PF13417 Glutathione S-transferase, N-terminal domain H9L11_20205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_20205 PF03466 LysR substrate binding domain H9L11_20215 PF01012 Electron transfer flavoprotein domain H9L11_20215 PF00766 Electron transfer flavoprotein FAD-binding domain H9L11_20220 PF02817 e3 binding domain H9L11_20220 PF00364 Biotin-requiring enzyme H9L11_20220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9L11_20225 PF02780 Transketolase, C-terminal domain H9L11_20225 PF02779 Transketolase, pyrimidine binding domain H9L11_20230 PF00676 Dehydrogenase E1 component H9L11_20250 PF00474 Sodium:solute symporter family H9L11_20255 PF02811 PHP domain H9L11_20255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9L11_20255 PF00929 Exonuclease H9L11_20255 PF14579 Helix-hairpin-helix motif H9L11_20255 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9L11_20255 PF11490 DNA polymerase III polC-type N-terminus II H9L11_20260 PF00571 CBS domain H9L11_20265 PF07729 FCD domain H9L11_20265 PF00392 Bacterial regulatory proteins, gntR family H9L11_20270 PF00392 Bacterial regulatory proteins, gntR family H9L11_20270 PF07729 FCD domain H9L11_20280 PF08787 Alginate lyase H9L11_20295 PF08787 Alginate lyase H9L11_20300 PF08787 Alginate lyase H9L11_20305 PF07940 Heparinase II/III-like protein H9L11_20305 PF05426 Alginate lyase H9L11_20310 PF05426 Alginate lyase H9L11_20310 PF07940 Heparinase II/III-like protein H9L11_20315 PF07883 Cupin domain H9L11_20320 PF00294 pfkB family carbohydrate kinase H9L11_20325 PF01081 KDPG and KHG aldolase H9L11_20335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H9L11_20335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_20345 PF04314 Copper chaperone PCu(A)C H9L11_20380 PF00486 Transcriptional regulatory protein, C terminal H9L11_20380 PF00072 Response regulator receiver domain H9L11_20400 PF00082 Subtilase family H9L11_20400 PF01483 Proprotein convertase P-domain H9L11_20410 PF00990 Diguanylate cyclase, GGDEF domain H9L11_20415 PF03222 Tryptophan/tyrosine permease family H9L11_20425 PF01568 Molydopterin dinucleotide binding domain H9L11_20425 PF00384 Molybdopterin oxidoreductase H9L11_20425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9L11_20430 PF10414 Sirohaem synthase dimerisation region H9L11_20430 PF14824 Sirohaem biosynthesis protein central H9L11_20430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9L11_20435 PF00591 Glycosyl transferase family, a/b domain H9L11_20435 PF02885 Glycosyl transferase family, helical bundle domain H9L11_20440 PF01738 Dienelactone hydrolase family H9L11_20445 PF00072 Response regulator receiver domain H9L11_20445 PF03861 ANTAR domain H9L11_20450 PF00005 ABC transporter H9L11_20455 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_20460 PF00005 ABC transporter H9L11_20465 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_20465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9L11_20465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9L11_20465 PF04324 BFD-like [2Fe-2S] binding domain H9L11_20465 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9L11_20465 PF13806 Rieske-like [2Fe-2S] domain H9L11_20495 PF00211 Adenylate and Guanylate cyclase catalytic domain H9L11_20495 PF00072 Response regulator receiver domain H9L11_20515 PF00069 Protein kinase domain H9L11_20515 PF03793 PASTA domain H9L11_20530 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9L11_20535 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9L11_20535 PF00691 OmpA family H9L11_20540 PF06761 Intracellular multiplication and human macrophage-killing H9L11_20540 PF14331 ImcF-related N-terminal domain H9L11_20540 PF06744 Type VI secretion protein IcmF C-terminal H9L11_20560 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H9L11_20565 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9L11_20570 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9L11_20585 PF05947 Type VI secretion system, TssF H9L11_20595 PF10431 C-terminal, D2-small domain, of ClpB protein H9L11_20595 PF17871 AAA lid domain H9L11_20595 PF07724 AAA domain (Cdc48 subfamily) H9L11_20595 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_20605 PF04717 Type VI secretion system, phage-baseplate injector H9L11_20605 PF06715 Gp5 C-terminal repeat (3 copies) H9L11_20620 PF00149 Calcineurin-like phosphoesterase H9L11_20620 PF12320 Type 5 capsule protein repressor C-terminal domain H9L11_20625 PF13476 AAA domain H9L11_20635 PF08212 Lipocalin-like domain H9L11_20645 PF03606 C4-dicarboxylate anaerobic carrier H9L11_20655 PF01212 Beta-eliminating lyase H9L11_20665 PF12592 Protein of unknown function (DUF3763) H9L11_20665 PF17868 AAA lid domain H9L11_20665 PF07728 AAA domain (dynein-related subfamily) H9L11_20670 PF05762 VWA domain containing CoxE-like protein H9L11_20685 PF03466 LysR substrate binding domain H9L11_20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_20690 PF01565 FAD binding domain H9L11_20690 PF09330 D-lactate dehydrogenase, membrane binding H9L11_20705 PF00842 Alanine racemase, C-terminal domain H9L11_20705 PF01168 Alanine racemase, N-terminal domain H9L11_20710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_20710 PF00672 HAMP domain H9L11_20725 PF09154 Domain of unknown function (DUF1939) H9L11_20725 PF00128 Alpha amylase, catalytic domain H9L11_20755 PF00296 Luciferase-like monooxygenase H9L11_20760 PF00563 EAL domain H9L11_20760 PF03707 Bacterial signalling protein N terminal repeat H9L11_20760 PF00990 Diguanylate cyclase, GGDEF domain H9L11_20770 PF03707 Bacterial signalling protein N terminal repeat H9L11_20770 PF00563 EAL domain H9L11_20770 PF00990 Diguanylate cyclase, GGDEF domain H9L11_20775 PF01272 Transcription elongation factor, GreA/GreB, C-term H9L11_20775 PF14760 Rnk N-terminus H9L11_20780 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_20780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9L11_20780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9L11_20780 PF04324 BFD-like [2Fe-2S] binding domain H9L11_20780 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9L11_20785 PF13806 Rieske-like [2Fe-2S] domain H9L11_20790 PF01226 Formate/nitrite transporter H9L11_20795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9L11_20795 PF14824 Sirohaem biosynthesis protein central H9L11_20795 PF10414 Sirohaem synthase dimerisation region H9L11_20810 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9L11_20820 PF07715 TonB-dependent Receptor Plug Domain H9L11_20820 PF00593 TonB dependent receptor H9L11_20830 PF13302 Acetyltransferase (GNAT) domain H9L11_20835 PF11756 Nitrous oxide-stimulated promoter H9L11_20840 PF07690 Major Facilitator Superfamily H9L11_20845 PF00085 Thioredoxin H9L11_20850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9L11_20850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9L11_20870 PF01238 Phosphomannose isomerase type I H9L11_20875 PF07690 Major Facilitator Superfamily H9L11_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_20880 PF05231 MASE1 H9L11_20880 PF07730 Histidine kinase H9L11_20885 PF00196 Bacterial regulatory proteins, luxR family H9L11_20885 PF00072 Response regulator receiver domain H9L11_20890 PF07690 Major Facilitator Superfamily H9L11_20895 PF02634 FdhD/NarQ family H9L11_20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_20900 PF03466 LysR substrate binding domain H9L11_20905 PF00384 Molybdopterin oxidoreductase H9L11_20920 PF02567 Phenazine biosynthesis-like protein H9L11_20925 PF01177 Asp/Glu/Hydantoin racemase H9L11_20930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9L11_20930 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9L11_20940 PF04143 Sulphur transport H9L11_20955 PF13597 Anaerobic ribonucleoside-triphosphate reductase H9L11_20955 PF03477 ATP cone domain H9L11_20965 PF01554 MatE H9L11_20970 PF12852 Cupin H9L11_20970 PF12833 Helix-turn-helix domain H9L11_20975 PF00155 Aminotransferase class I and II H9L11_20980 PF08443 RimK-like ATP-grasp domain H9L11_20980 PF18030 RimK PreATP-grasp domain H9L11_20990 PF04076 Bacterial OB fold (BOF) protein H9L11_20995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9L11_20995 PF07685 CobB/CobQ-like glutamine amidotransferase domain H9L11_21005 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_21010 PF03459 TOBE domain H9L11_21010 PF00005 ABC transporter H9L11_21020 PF00360 Phytochrome region H9L11_21020 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21020 PF00563 EAL domain H9L11_21020 PF01590 GAF domain H9L11_21025 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9L11_21040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9L11_21040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H9L11_21045 PF02233 NAD(P) transhydrogenase beta subunit H9L11_21055 PF00486 Transcriptional regulatory protein, C terminal H9L11_21055 PF00072 Response regulator receiver domain H9L11_21070 PF03701 Uncharacterised protein family (UPF0181) H9L11_21075 PF00582 Universal stress protein family H9L11_21085 PF03466 LysR substrate binding domain H9L11_21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21090 PF01695 IstB-like ATP binding protein H9L11_21095 PF02796 Helix-turn-helix domain of resolvase H9L11_21095 PF00665 Integrase core domain H9L11_21100 PF01253 Translation initiation factor SUI1 H9L11_21110 PF07478 D-ala D-ala ligase C-terminus H9L11_21110 PF01820 D-ala D-ala ligase N-terminus H9L11_21115 PF05036 Sporulation related domain H9L11_21120 PF13607 Succinyl-CoA ligase like flavodoxin domain H9L11_21120 PF13380 CoA binding domain H9L11_21120 PF00583 Acetyltransferase (GNAT) family H9L11_21125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21125 PF03466 LysR substrate binding domain H9L11_21130 PF00593 TonB dependent receptor H9L11_21130 PF07715 TonB-dependent Receptor Plug Domain H9L11_21130 PF04886 PT repeat H9L11_21135 PF16363 GDP-mannose 4,6 dehydratase H9L11_21140 PF00563 EAL domain H9L11_21140 PF08447 PAS fold H9L11_21140 PF08448 PAS fold H9L11_21140 PF13426 PAS domain H9L11_21140 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21140 PF05231 MASE1 H9L11_21145 PF03746 LamB/YcsF family H9L11_21150 PF02682 Carboxyltransferase domain, subdomain C and D H9L11_21155 PF02626 Carboxyltransferase domain, subdomain A and B H9L11_21170 PF00005 ABC transporter H9L11_21175 PF13472 GDSL-like Lipase/Acylhydrolase family H9L11_21180 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9L11_21180 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9L11_21180 PF07055 Enoyl reductase FAD binding domain H9L11_21185 PF00563 EAL domain H9L11_21185 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21185 PF03707 Bacterial signalling protein N terminal repeat H9L11_21185 PF13188 PAS domain H9L11_21195 PF00684 DnaJ central domain H9L11_21195 PF00226 DnaJ domain H9L11_21195 PF01556 DnaJ C terminal domain H9L11_21220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9L11_21220 PF12793 Sugar transport-related sRNA regulator N-term H9L11_21230 PF03061 Thioesterase superfamily H9L11_21245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9L11_21250 PF12262 Bacterial virulence factor lipase N-terminal H9L11_21270 PF03741 Integral membrane protein TerC family H9L11_21275 PF00149 Calcineurin-like phosphoesterase H9L11_21275 PF02872 5'-nucleotidase, C-terminal domain H9L11_21280 PF11398 Protein of unknown function (DUF2813) H9L11_21285 PF06496 Protein of unknown function (DUF1097) H9L11_21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21290 PF03466 LysR substrate binding domain H9L11_21295 PF01226 Formate/nitrite transporter H9L11_21300 PF04264 YceI-like domain H9L11_21305 PF01292 Prokaryotic cytochrome b561 H9L11_21325 PF00270 DEAD/DEAH box helicase H9L11_21325 PF00271 Helicase conserved C-terminal domain H9L11_21330 PF04336 Acyl carrier protein phosphodiesterase H9L11_21340 PF12729 Four helix bundle sensory module for signal transduction H9L11_21340 PF00672 HAMP domain H9L11_21340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_21345 PF13419 Haloacid dehalogenase-like hydrolase H9L11_21360 PF00294 pfkB family carbohydrate kinase H9L11_21365 PF01268 Formate--tetrahydrofolate ligase H9L11_21370 PF00483 Nucleotidyl transferase H9L11_21375 PF06483 Chitinase C H9L11_21375 PF00704 Glycosyl hydrolases family 18 H9L11_21380 PF06719 AraC-type transcriptional regulator N-terminus H9L11_21380 PF12833 Helix-turn-helix domain H9L11_21385 PF00465 Iron-containing alcohol dehydrogenase H9L11_21395 PF00005 ABC transporter H9L11_21400 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_21405 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9L11_21410 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_21430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9L11_21430 PF00356 Bacterial regulatory proteins, lacI family H9L11_21435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9L11_21435 PF00381 PTS HPr component phosphorylation site H9L11_21440 PF00294 pfkB family carbohydrate kinase H9L11_21445 PF02378 Phosphotransferase system, EIIC H9L11_21445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9L11_21455 PF00873 AcrB/AcrD/AcrF family H9L11_21475 PF08669 Glycine cleavage T-protein C-terminal barrel domain H9L11_21475 PF01571 Aminomethyltransferase folate-binding domain H9L11_21485 PF00464 Serine hydroxymethyltransferase H9L11_21490 PF01597 Glycine cleavage H-protein H9L11_21495 PF02347 Glycine cleavage system P-protein H9L11_21500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_21505 PF00753 Metallo-beta-lactamase superfamily H9L11_21505 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9L11_21510 PF03466 LysR substrate binding domain H9L11_21510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21515 PF00892 EamA-like transporter family H9L11_21520 PF02627 Carboxymuconolactone decarboxylase family H9L11_21525 PF12833 Helix-turn-helix domain H9L11_21575 PF11490 DNA polymerase III polC-type N-terminus II H9L11_21575 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9L11_21575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9L11_21575 PF14579 Helix-hairpin-helix motif H9L11_21575 PF02811 PHP domain H9L11_21575 PF00929 Exonuclease H9L11_21585 PF00664 ABC transporter transmembrane region H9L11_21585 PF00005 ABC transporter H9L11_21605 PF02253 Phospholipase A1 H9L11_21615 PF00376 MerR family regulatory protein H9L11_21615 PF09278 MerR, DNA binding H9L11_21620 PF01327 Polypeptide deformylase H9L11_21650 PF00571 CBS domain H9L11_21650 PF03448 MgtE intracellular N domain H9L11_21650 PF01769 Divalent cation transporter H9L11_21670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9L11_21675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9L11_21685 PF01757 Acyltransferase family H9L11_21695 PF09722 Protein of unknown function (DUF2384) H9L11_21700 PF00141 Peroxidase H9L11_21705 PF13187 4Fe-4S dicluster domain H9L11_21705 PF01645 Conserved region in glutamate synthase H9L11_21715 PF00171 Aldehyde dehydrogenase family H9L11_21730 PF00892 EamA-like transporter family H9L11_21735 PF00893 Small Multidrug Resistance protein H9L11_21755 PF00892 EamA-like transporter family H9L11_21765 PF07963 Prokaryotic N-terminal methylation motif H9L11_21765 PF08334 Type II secretion system (T2SS), protein G H9L11_21770 PF01584 CheW-like domain H9L11_21770 PF00072 Response regulator receiver domain H9L11_21775 PF00072 Response regulator receiver domain H9L11_21775 PF00196 Bacterial regulatory proteins, luxR family H9L11_21785 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21790 PF00196 Bacterial regulatory proteins, luxR family H9L11_21790 PF00072 Response regulator receiver domain H9L11_21795 PF03707 Bacterial signalling protein N terminal repeat H9L11_21795 PF00563 EAL domain H9L11_21795 PF00990 Diguanylate cyclase, GGDEF domain H9L11_21795 PF13188 PAS domain H9L11_21800 PF00072 Response regulator receiver domain H9L11_21800 PF09456 RcsC Alpha-Beta-Loop (ABL) H9L11_21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_21800 PF00512 His Kinase A (phospho-acceptor) domain H9L11_21805 PF01926 50S ribosome-binding GTPase H9L11_21810 PF00155 Aminotransferase class I and II H9L11_21815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_21815 PF00072 Response regulator receiver domain H9L11_21825 PF00814 Glycoprotease family H9L11_21825 PF00583 Acetyltransferase (GNAT) family H9L11_21835 PF03606 C4-dicarboxylate anaerobic carrier H9L11_21850 PF08774 VRR-NUC domain H9L11_21850 PF18081 Fanconi anemia-associated nuclease SAP domain H9L11_21860 PF04076 Bacterial OB fold (BOF) protein H9L11_21865 PF00781 Diacylglycerol kinase catalytic domain H9L11_21870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21870 PF03466 LysR substrate binding domain H9L11_21875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9L11_21890 PF00092 von Willebrand factor type A domain H9L11_21905 PF07726 ATPase family associated with various cellular activities (AAA) H9L11_21905 PF17863 AAA lid domain H9L11_21910 PF04055 Radical SAM superfamily H9L11_21910 PF13186 Iron-sulfur cluster-binding domain H9L11_21915 PF00884 Sulfatase H9L11_21915 PF16385 Domain of unknown function H9L11_21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_21920 PF03466 LysR substrate binding domain H9L11_21925 PF00884 Sulfatase H9L11_21930 PF00072 Response regulator receiver domain H9L11_21930 PF00486 Transcriptional regulatory protein, C terminal H9L11_21945 PF00072 Response regulator receiver domain H9L11_21945 PF00672 HAMP domain H9L11_21945 PF00512 His Kinase A (phospho-acceptor) domain H9L11_21945 PF01627 Hpt domain H9L11_21945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_21950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9L11_21955 PF02142 MGS-like domain H9L11_21960 PF13361 UvrD-like helicase C-terminal domain H9L11_21960 PF00580 UvrD/REP helicase N-terminal domain H9L11_21960 PF12462 DNA helicase IV / RNA helicase N terminal H9L11_21965 PF12805 FUSC-like inner membrane protein yccS H9L11_21995 PF00593 TonB dependent receptor H9L11_21995 PF07715 TonB-dependent Receptor Plug Domain H9L11_22000 PF12833 Helix-turn-helix domain H9L11_22005 PF13411 MerR HTH family regulatory protein H9L11_22010 PF00005 ABC transporter H9L11_22015 PF01032 FecCD transport family H9L11_22020 PF01032 FecCD transport family H9L11_22025 PF01497 Periplasmic binding protein H9L11_22035 PF01048 Phosphorylase superfamily H9L11_22040 PF04973 Nicotinamide mononucleotide transporter H9L11_22050 PF00356 Bacterial regulatory proteins, lacI family H9L11_22055 PF00294 pfkB family carbohydrate kinase H9L11_22060 PF13407 Periplasmic binding protein domain H9L11_22065 PF02653 Branched-chain amino acid transport system / permease component H9L11_22070 PF00005 ABC transporter H9L11_22075 PF05025 RbsD / FucU transport protein family H9L11_22080 PF00563 EAL domain H9L11_22080 PF00990 Diguanylate cyclase, GGDEF domain H9L11_22125 PF04116 Fatty acid hydroxylase superfamily H9L11_22135 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H9L11_22135 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H9L11_22145 PF00512 His Kinase A (phospho-acceptor) domain H9L11_22145 PF09308 LuxQ, periplasmic H9L11_22145 PF00072 Response regulator receiver domain H9L11_22145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_22150 PF00034 Cytochrome c H9L11_22150 PF03150 Di-haem cytochrome c peroxidase H9L11_22155 PF13358 DDE superfamily endonuclease H9L11_22165 PF01145 SPFH domain / Band 7 family H9L11_22165 PF16200 C-terminal region of band_7 H9L11_22175 PF00881 Nitroreductase family H9L11_22180 PF00005 ABC transporter H9L11_22180 PF00571 CBS domain H9L11_22185 PF00528 Binding-protein-dependent transport system inner membrane component H9L11_22190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9L11_22195 PF05199 GMC oxidoreductase H9L11_22195 PF00732 GMC oxidoreductase H9L11_22200 PF00171 Aldehyde dehydrogenase family H9L11_22205 PF00440 Bacterial regulatory proteins, tetR family H9L11_22205 PF13977 BetI-type transcriptional repressor, C-terminal H9L11_22210 PF00072 Response regulator receiver domain H9L11_22210 PF00990 Diguanylate cyclase, GGDEF domain H9L11_22220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9L11_22220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9L11_22230 PF00378 Enoyl-CoA hydratase/isomerase H9L11_22235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_22235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_22235 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_22240 PF00171 Aldehyde dehydrogenase family H9L11_22245 PF02803 Thiolase, C-terminal domain H9L11_22245 PF00108 Thiolase, N-terminal domain H9L11_22250 PF09278 MerR, DNA binding H9L11_22250 PF00376 MerR family regulatory protein H9L11_22255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9L11_22255 PF02770 Acyl-CoA dehydrogenase, middle domain H9L11_22255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9L11_22260 PF01039 Carboxyl transferase domain H9L11_22265 PF00378 Enoyl-CoA hydratase/isomerase H9L11_22270 PF18140 Propionyl-coenzyme A carboxylase BT domain H9L11_22270 PF00364 Biotin-requiring enzyme H9L11_22270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9L11_22270 PF02785 Biotin carboxylase C-terminal domain H9L11_22270 PF00289 Biotin carboxylase, N-terminal domain H9L11_22275 PF00682 HMGL-like H9L11_22285 PF12795 Mechanosensitive ion channel porin domain H9L11_22285 PF00924 Mechanosensitive ion channel H9L11_22285 PF12794 Mechanosensitive ion channel inner membrane domain 1 H9L11_22290 PF14602 Hexapeptide repeat of succinyl-transferase H9L11_22290 PF12464 Maltose acetyltransferase H9L11_22295 PF00392 Bacterial regulatory proteins, gntR family H9L11_22295 PF00155 Aminotransferase class I and II H9L11_22300 PF01654 Cytochrome bd terminal oxidase subunit I H9L11_22305 PF02322 Cytochrome bd terminal oxidase subunit II H9L11_22320 PF13419 Haloacid dehalogenase-like hydrolase H9L11_22325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_22325 PF03466 LysR substrate binding domain H9L11_22330 PF03306 Alpha-acetolactate decarboxylase H9L11_22335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9L11_22335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9L11_22335 PF00205 Thiamine pyrophosphate enzyme, central domain H9L11_22345 PF05724 Thiopurine S-methyltransferase (TPMT) H9L11_22350 PF00501 AMP-binding enzyme H9L11_22350 PF14535 AMP-binding enzyme C-terminal domain H9L11_22355 PF00005 ABC transporter H9L11_22375 PF00501 AMP-binding enzyme H9L11_22380 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9L11_22380 PF00005 ABC transporter H9L11_22390 PF01012 Electron transfer flavoprotein domain H9L11_22395 PF01012 Electron transfer flavoprotein domain H9L11_22395 PF00766 Electron transfer flavoprotein FAD-binding domain H9L11_22400 PF00501 AMP-binding enzyme H9L11_22400 PF13193 AMP-binding enzyme C-terminal domain H9L11_22405 PF02378 Phosphotransferase system, EIIC H9L11_22405 PF00367 phosphotransferase system, EIIB H9L11_22410 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9L11_22410 PF02056 Family 4 glycosyl hydrolase H9L11_22415 PF07702 UTRA domain H9L11_22415 PF00392 Bacterial regulatory proteins, gntR family H9L11_22420 PF03334 Na+/H+ antiporter subunit H9L11_22425 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H9L11_22430 PF01899 Na+/H+ ion antiporter subunit H9L11_22435 PF00361 Proton-conducting membrane transporter H9L11_22440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H9L11_22445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H9L11_22445 PF13244 Domain of unknown function (DUF4040) H9L11_22445 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H9L11_22445 PF00361 Proton-conducting membrane transporter H9L11_22455 PF00582 Universal stress protein family H9L11_22460 PF00106 short chain dehydrogenase H9L11_22465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_22465 PF03466 LysR substrate binding domain H9L11_22475 PF07690 Major Facilitator Superfamily H9L11_22510 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9L11_22540 PF01037 Lrp/AsnC ligand binding domain H9L11_22550 PF05947 Type VI secretion system, TssF H9L11_22560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9L11_22575 PF00069 Protein kinase domain H9L11_22600 PF04717 Type VI secretion system, phage-baseplate injector H9L11_22605 PF05638 Type VI secretion system effector, Hcp H9L11_22610 PF17871 AAA lid domain H9L11_22610 PF07724 AAA domain (Cdc48 subfamily) H9L11_22610 PF10431 C-terminal, D2-small domain, of ClpB protein H9L11_22610 PF00004 ATPase family associated with various cellular activities (AAA) H9L11_22615 PF00158 Sigma-54 interaction domain H9L11_22615 PF02954 Bacterial regulatory protein, Fis family H9L11_22615 PF00072 Response regulator receiver domain H9L11_22640 PF01551 Peptidase family M23 H9L11_22670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9L11_22680 PF12833 Helix-turn-helix domain H9L11_22685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9L11_22685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9L11_22690 PF01238 Phosphomannose isomerase type I H9L11_22715 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9L11_22715 PF07971 Glycosyl hydrolase family 92 H9L11_22720 PF07971 Glycosyl hydrolase family 92 H9L11_22720 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9L11_22730 PF00478 IMP dehydrogenase / GMP reductase domain H9L11_22735 PF01256 Carbohydrate kinase H9L11_22735 PF03853 YjeF-related protein N-terminus H9L11_22745 PF00072 Response regulator receiver domain H9L11_22750 PF00248 Aldo/keto reductase family H9L11_22765 PF00654 Voltage gated chloride channel H9L11_22775 PF01227 GTP cyclohydrolase I H9L11_22780 PF03453 MoeA N-terminal region (domain I and II) H9L11_22780 PF03454 MoeA C-terminal region (domain IV) H9L11_22780 PF00994 Probable molybdopterin binding domain H9L11_22785 PF00899 ThiF family H9L11_22800 PF00581 Rhodanese-like domain H9L11_22810 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9L11_22815 PF02780 Transketolase, C-terminal domain H9L11_22815 PF02779 Transketolase, pyrimidine binding domain H9L11_22815 PF00456 Transketolase, thiamine diphosphate binding domain H9L11_22820 PF08447 PAS fold H9L11_22820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_22825 PF07690 Major Facilitator Superfamily H9L11_22830 PF00793 DAHP synthetase I family H9L11_22840 PF01389 OmpA-like transmembrane domain H9L11_22840 PF00691 OmpA family H9L11_22845 PF13419 Haloacid dehalogenase-like hydrolase H9L11_22850 PF00472 RF-1 domain H9L11_22855 PF12729 Four helix bundle sensory module for signal transduction H9L11_22855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9L11_22855 PF00672 HAMP domain H9L11_22860 PF00873 AcrB/AcrD/AcrF family H9L11_22865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_22870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9L11_22875 PF07687 Peptidase dimerisation domain H9L11_22875 PF01546 Peptidase family M20/M25/M40 H9L11_22890 PF00072 Response regulator receiver domain H9L11_22890 PF00196 Bacterial regulatory proteins, luxR family H9L11_22895 PF07730 Histidine kinase H9L11_22895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_22895 PF00672 HAMP domain H9L11_22895 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H9L11_22900 PF13187 4Fe-4S dicluster domain H9L11_22900 PF12838 4Fe-4S dicluster domain H9L11_22910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9L11_22910 PF01568 Molydopterin dinucleotide binding domain H9L11_22910 PF00384 Molybdopterin oxidoreductase H9L11_22915 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H9L11_22920 PF03264 NapC/NirT cytochrome c family, N-terminal region H9L11_22930 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H9L11_22940 PF00108 Thiolase, N-terminal domain H9L11_22940 PF02803 Thiolase, C-terminal domain H9L11_22945 PF00106 short chain dehydrogenase H9L11_22950 PF01810 LysE type translocator H9L11_22960 PF02355 Protein export membrane protein H9L11_22960 PF07549 SecD/SecF GG Motif H9L11_22965 PF07549 SecD/SecF GG Motif H9L11_22965 PF13721 SecD export protein N-terminal TM region H9L11_22965 PF02355 Protein export membrane protein H9L11_22990 PF01037 Lrp/AsnC ligand binding domain H9L11_23010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_23010 PF00529 HlyD membrane-fusion protein of T1SS H9L11_23020 PF00512 His Kinase A (phospho-acceptor) domain H9L11_23020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_23020 PF09308 LuxQ, periplasmic H9L11_23020 PF00072 Response regulator receiver domain H9L11_23025 PF13407 Periplasmic binding protein domain H9L11_23030 PF01541 GIY-YIG catalytic domain H9L11_23035 PF04337 Protein of unknown function, DUF480 H9L11_23045 PF04363 Protein of unknown function (DUF496) H9L11_23050 PF01554 MatE H9L11_23055 PF00672 HAMP domain H9L11_23055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9L11_23055 PF00072 Response regulator receiver domain H9L11_23055 PF01627 Hpt domain H9L11_23055 PF00512 His Kinase A (phospho-acceptor) domain H9L11_23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_23060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9L11_23060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9L11_23080 PF03466 LysR substrate binding domain H9L11_23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_23090 PF13520 Amino acid permease H9L11_23095 PF00155 Aminotransferase class I and II H9L11_23095 PF00392 Bacterial regulatory proteins, gntR family H9L11_23105 PF16527 Two-component sensor protein CpxA, periplasmic domain H9L11_23105 PF00512 His Kinase A (phospho-acceptor) domain H9L11_23105 PF00672 HAMP domain H9L11_23105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_23110 PF00072 Response regulator receiver domain H9L11_23110 PF00486 Transcriptional regulatory protein, C terminal H9L11_23125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9L11_23125 PF12833 Helix-turn-helix domain H9L11_23135 PF00529 HlyD membrane-fusion protein of T1SS H9L11_23135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9L11_23140 PF03109 ABC1 family H9L11_23145 PF03448 MgtE intracellular N domain H9L11_23145 PF01769 Divalent cation transporter H9L11_23145 PF00571 CBS domain H9L11_23150 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H9L11_23155 PF07969 Amidohydrolase family H9L11_23160 PF01966 HD domain H9L11_23170 PF07690 Major Facilitator Superfamily H9L11_23180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9L11_23185 PF00255 Glutathione peroxidase H9L11_23200 PF01323 DSBA-like thioredoxin domain H9L11_23215 PF00072 Response regulator receiver domain H9L11_23215 PF00486 Transcriptional regulatory protein, C terminal H9L11_23220 PF16527 Two-component sensor protein CpxA, periplasmic domain H9L11_23220 PF00672 HAMP domain H9L11_23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9L11_23220 PF00512 His Kinase A (phospho-acceptor) domain H9L11_23230 PF01219 Prokaryotic diacylglycerol kinase H9L11_23235 PF08019 Phosphoethanolamine transferase EptA/EptB H9L11_23235 PF00884 Sulfatase H9L11_23240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9L11_23255 PF01734 Patatin-like phospholipase H9L11_23260 PF05726 Pirin C-terminal cupin domain H9L11_23260 PF02678 Pirin H9L11_23265 PF00313 'Cold-shock' DNA-binding domain H9L11_23280 PF00962 Adenosine/AMP deaminase H9L11_23285 PF08534 Redoxin H9L11_23285 PF00462 Glutaredoxin H9L11_23295 PF00768 D-alanyl-D-alanine carboxypeptidase H9L11_23295 PF07943 Penicillin-binding protein 5, C-terminal domain H9L11_23300 PF02798 Glutathione S-transferase, N-terminal domain H9L11_23305 PF08244 Glycosyl hydrolases family 32 C terminal H9L11_23305 PF00251 Glycosyl hydrolases family 32 N-terminal domain H9L11_23310 PF00294 pfkB family carbohydrate kinase H9L11_23315 PF02378 Phosphotransferase system, EIIC H9L11_23315 PF00367 phosphotransferase system, EIIB H9L11_23320 PF00356 Bacterial regulatory proteins, lacI family H9L11_23325 PF02264 LamB porin H9L11_23325 PF11471 Maltoporin periplasmic N-terminal extension H9L11_23370 PF00106 short chain dehydrogenase H9L11_23375 PF03466 LysR substrate binding domain H9L11_23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_23380 PF12833 Helix-turn-helix domain H9L11_23380 PF01497 Periplasmic binding protein H9L11_23385 PF00155 Aminotransferase class I and II H9L11_23405 PF00270 DEAD/DEAH box helicase H9L11_23405 PF00271 Helicase conserved C-terminal domain H9L11_23415 PF03466 LysR substrate binding domain H9L11_23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_23420 PF03466 LysR substrate binding domain H9L11_23420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9L11_23430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9L11_23435 PF00107 Zinc-binding dehydrogenase H9L11_23435 PF08240 Alcohol dehydrogenase GroES-like domain H9L11_23455 PF00155 Aminotransferase class I and II H9L11_23455 PF00392 Bacterial regulatory proteins, gntR family H9L11_23460 PF00557 Metallopeptidase family M24 H9L11_23460 PF01321 Creatinase/Prolidase N-terminal domain H9L11_23465 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9L11_23470 PF01037 Lrp/AsnC ligand binding domain H9L11_23475 PF00171 Aldehyde dehydrogenase family H9L11_23480 PF00202 Aminotransferase class-III H9L11_23485 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H9L11_23500 PF03466 LysR substrate binding domain H9L11_23500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family