locus-tag	class	description
LTQ03_00005	COG3385	transposase activity
LTQ03_00015	COG4989	oxidoreductase activity
LTQ03_00045	COG3568	Endonuclease Exonuclease Phosphatase
LTQ03_00090	COG2925	Exonuclease
LTQ03_00100	COG1346	cytolysis
LTQ03_00105	COG0295	cytidine deaminase activity
LTQ03_00110	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LTQ03_00115	COG0500	methyltransferase
LTQ03_00160	COG0776	regulation of translation
LTQ03_00175	COG0523	cobalamin synthesis protein
LTQ03_00185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ03_00200	COG2175	clavaminate synthase activity
LTQ03_00240	COG0840	transmembrane signaling receptor activity
LTQ03_00245	COG2378	regulation of single-species biofilm formation
LTQ03_00280	COG0776	regulation of translation
LTQ03_00300	COG0463	Glycosyl transferase, family 2
LTQ03_00325	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
LTQ03_00350	COG1342	Belongs to the UPF0251 family
LTQ03_00365	COG2205	protein histidine kinase activity
LTQ03_00385	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LTQ03_00400	COG1289	transmembrane transporter activity
LTQ03_00415	COG0583	DNA-binding transcription factor activity
LTQ03_00420	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LTQ03_00445	COG0697	spore germination
LTQ03_00455	COG2873	o-acetylhomoserine
LTQ03_00460	COG1522	sequence-specific DNA binding
LTQ03_00475	COG1464	Belongs to the NlpA lipoprotein family
LTQ03_00490	COG2356	endonuclease I
LTQ03_00495	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ03_00500	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LTQ03_00560	COG0596	Alpha beta hydrolase
LTQ03_00580	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_00580	COG0072	phenylalanine-tRNA ligase activity
LTQ03_00585	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LTQ03_00630	COG1643	Atp-dependent helicase
LTQ03_00660	COG3710	Transcriptional regulator
LTQ03_00680	COG3706	GGDEF domain
LTQ03_00695	COG0443	Heat shock 70 kDa protein
LTQ03_00710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ03_00725	COG3106	COG3106 Predicted ATPase
LTQ03_00745	COG2205	protein histidine kinase activity
LTQ03_00745	COG0784	Response regulator, receiver
LTQ03_00755	COG0494	nUDIX hydrolase
LTQ03_00760	COG0814	amino acid
LTQ03_00765	COG1760	l-serine dehydratase
LTQ03_00770	COG0814	amino acid
LTQ03_00775	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LTQ03_00780	COG0583	DNA-binding transcription factor activity
LTQ03_00790	COG0840	transmembrane signaling receptor activity
LTQ03_00795	COG0659	secondary active sulfate transmembrane transporter activity
LTQ03_00800	COG0017	Asparaginyl-tRNA synthetase
LTQ03_00820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ03_00830	COG2770	Histidine kinase
LTQ03_00830	COG3437	response regulator, receiver
LTQ03_00835	COG1448	Aminotransferase
LTQ03_00850	COG2176	DNA-directed DNA polymerase activity
LTQ03_00855	COG2258	MOSC domain
LTQ03_00870	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LTQ03_00880	COG3852	Histidine kinase
LTQ03_00885	COG2204	response regulator
LTQ03_00895	COG3070	regulator of competence-specific genes
LTQ03_00905	COG2431	L-lysine efflux transmembrane transporter activity
LTQ03_00915	COG0076	glutamate decarboxylase activity
LTQ03_00920	COG1737	Transcriptional regulator
LTQ03_00930	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LTQ03_00940	COG3273	potassium ion transport
LTQ03_00940	COG2985	domain, Protein
LTQ03_00945	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LTQ03_00990	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LTQ03_01005	COG1136	(ABC) transporter
LTQ03_01010	COG0534	Mate efflux family protein
LTQ03_01015	COG0702	epimerase
LTQ03_01025	COG2814	Major facilitator Superfamily
LTQ03_01035	COG1061	Type III restriction enzyme res subunit
LTQ03_01050	COG0642	Histidine kinase
LTQ03_01060	COG0586	Pfam SNARE associated Golgi protein
LTQ03_01070	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LTQ03_01140	COG3008	intermembrane lipid transfer
LTQ03_01140	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LTQ03_01145	COG2995	paraquat-inducible protein a
LTQ03_01150	COG0583	DNA-binding transcription factor activity
LTQ03_01160	COG2113	Glycine betaine
LTQ03_01165	COG4176	ABC-type proline glycine betaine transport system permease component
LTQ03_01185	COG0243	molybdopterin cofactor binding
LTQ03_01190	COG3005	denitrification pathway
LTQ03_01200	COG2866	Carboxypeptidase
LTQ03_01210	COG1280	lysine exporter protein (LysE YggA)
LTQ03_01215	COG0513	Belongs to the DEAD box helicase family
LTQ03_01235	COG3313	Fe-S protein
LTQ03_01245	COG4134	Bacterial extracellular solute-binding protein
LTQ03_01250	COG4135	transport system, permease component
LTQ03_01255	COG4136	ATPase activity
LTQ03_01260	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LTQ03_01265	COG3385	transposase activity
LTQ03_01270	COG0116	Belongs to the methyltransferase superfamily
LTQ03_01270	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LTQ03_01275	COG0564	pseudouridine synthase activity
LTQ03_01285	COG0733	neurotransmitter:sodium symporter activity
LTQ03_01295	COG0626	cystathionine gamma-synthase activity
LTQ03_01310	COG2818	Glycosylase
LTQ03_01325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_01330	COG1983	PspC domain protein
LTQ03_01340	COG1842	Phage shock protein A
LTQ03_01345	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LTQ03_01350	COG4166	transmembrane transport
LTQ03_01355	COG4168	peptide transport system, permease
LTQ03_01370	COG4172	Belongs to the ABC transporter superfamily
LTQ03_01385	COG1227	inorganic diphosphatase activity
LTQ03_01395	COG0243	molybdopterin cofactor binding
LTQ03_01400	COG3005	denitrification pathway
LTQ03_01405	COG4459	periplasmic nitrate reductase
LTQ03_01410	COG0390	transport system, permease component
LTQ03_01415	COG2116	formate transmembrane transporter activity
LTQ03_01435	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LTQ03_01445	COG0215	cysteine-tRNA ligase activity
LTQ03_01450	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ03_01455	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ03_01460	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LTQ03_01465	COG3012	SEC-C Motif Domain Protein
LTQ03_01470	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LTQ03_01470	COG0140	phosphoribosyl-ATP diphosphatase activity
LTQ03_01475	COG0107	imidazoleglycerol-phosphate synthase activity
LTQ03_01480	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LTQ03_01485	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LTQ03_01490	COG0131	Imidazoleglycerol-phosphate dehydratase
LTQ03_01490	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LTQ03_01495	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LTQ03_01510	COG1757	Na H antiporter
LTQ03_01515	COG2916	Histone family protein nucleoid-structuring protein H-NS
LTQ03_01525	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_01540	COG2915	High frequency lysogenization protein hflD homolog
LTQ03_01545	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LTQ03_01550	COG0501	Belongs to the peptidase M48B family
LTQ03_01560	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LTQ03_01570	COG0156	8-amino-7-oxononanoate synthase activity
LTQ03_01575	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LTQ03_01580	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LTQ03_01585	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LTQ03_01590	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LTQ03_01595	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LTQ03_01600	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LTQ03_01605	COG1674	ftsk spoiiie
LTQ03_01610	COG1522	sequence-specific DNA binding
LTQ03_01615	COG0686	Belongs to the AlaDH PNT family
LTQ03_01630	COG0583	DNA-binding transcription factor activity
LTQ03_01645	COG0284	orotidine-5'-phosphate decarboxylase activity
LTQ03_01650	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LTQ03_01655	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LTQ03_01660	COG0776	regulation of translation
LTQ03_01665	COG0539	negative regulation of cytoplasmic translation
LTQ03_01670	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LTQ03_01675	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LTQ03_01680	COG2835	tetraacyldisaccharide 4'-kinase activity
LTQ03_01685	COG1663	tetraacyldisaccharide 4'-kinase activity
LTQ03_01690	COG1132	(ABC) transporter
LTQ03_01695	COG0658	competence protein
LTQ03_01695	COG2333	competence protein COMEC
LTQ03_01705	COG4591	ABC-type transport system involved in lipoprotein release permease component
LTQ03_01710	COG1136	(ABC) transporter
LTQ03_01715	COG4591	ABC-type transport system involved in lipoprotein release permease component
LTQ03_01725	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LTQ03_01740	COG1252	NADH dehydrogenase
LTQ03_01745	COG3150	esterase
LTQ03_01770	COG0537	adenosine 5'-monophosphoramidase activity
LTQ03_01800	COG0517	IMP dehydrogenase activity
LTQ03_01800	COG0617	tRNA 3'-terminal CCA addition
LTQ03_01800	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LTQ03_01830	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ03_01835	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ03_01860	COG1902	pentaerythritol trinitrate reductase activity
LTQ03_01865	COG0346	lactoylglutathione lyase activity
LTQ03_01870	COG0583	DNA-binding transcription factor activity
LTQ03_01895	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LTQ03_01910	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LTQ03_01915	COG1845	cytochrome c oxidase, subunit III
LTQ03_01920	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LTQ03_01925	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LTQ03_01930	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_01940	COG1309	transcriptional regulator
LTQ03_01945	COG0583	DNA-binding transcription factor activity
LTQ03_01960	COG3040	lipid binding
LTQ03_01975	COG1228	amidohydrolase
LTQ03_01990	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LTQ03_02000	COG3118	belongs to the thioredoxin family
LTQ03_02005	COG4232	protein-disulfide reductase activity
LTQ03_02030	COG0697	spore germination
LTQ03_02040	COG0583	DNA-binding transcription factor activity
LTQ03_02060	COG1227	inorganic diphosphatase activity
LTQ03_02065	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LTQ03_02070	COG2233	PERMEase
LTQ03_02090	COG1280	lysine exporter protein (LysE YggA)
LTQ03_02095	COG1522	sequence-specific DNA binding
LTQ03_02100	COG1760	l-serine dehydratase
LTQ03_02110	COG2814	Major facilitator Superfamily
LTQ03_02125	COG1609	Transcriptional regulator
LTQ03_02130	COG3119	arylsulfatase activity
LTQ03_02155	COG0583	DNA-binding transcription factor activity
LTQ03_02160	COG1486	melibiose metabolic process
LTQ03_02170	COG0789	Transcriptional regulator
LTQ03_02180	COG0069	glutamate synthase activity
LTQ03_02195	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LTQ03_02235	COG0463	Glycosyl transferase, family 2
LTQ03_02235	COG1216	Glycosyl transferase, family 2
LTQ03_02240	COG0438	transferase activity, transferring glycosyl groups
LTQ03_02245	COG0328	RNA-DNA hybrid ribonuclease activity
LTQ03_02245	COG3341	Caulimovirus viroplasmin
LTQ03_02305	COG3126	Type III secretion system lipoprotein chaperone (YscW)
LTQ03_02310	COG1946	Acyl-CoA thioesterase
LTQ03_02320	COG1522	sequence-specific DNA binding
LTQ03_02335	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_02405	COG2855	membrane
LTQ03_02420	COG1263	PTS System
LTQ03_02420	COG2190	(PTS) system
LTQ03_02420	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ03_02440	COG2267	carboxylic ester hydrolase activity
LTQ03_02445	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LTQ03_02450	COG1169	isochorismate synthase
LTQ03_02455	COG0436	Aminotransferase
LTQ03_02460	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LTQ03_02465	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LTQ03_02480	COG1555	photosystem II stabilization
LTQ03_02485	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ03_02490	COG0776	regulation of translation
LTQ03_02495	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LTQ03_02500	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LTQ03_02505	COG0740	serine-type endopeptidase activity
LTQ03_02510	COG0544	peptidyl-prolyl cis-trans isomerase activity
LTQ03_02520	COG2204	response regulator
LTQ03_02530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_02535	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_02540	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ03_02555	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LTQ03_02555	COG3321	synthase
LTQ03_02570	COG2070	2-Nitropropane dioxygenase
LTQ03_02570	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LTQ03_02580	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LTQ03_02585	COG3842	ATPase activity
LTQ03_02595	COG1175	transmembrane transport
LTQ03_02615	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LTQ03_02620	COG1280	lysine exporter protein (LysE YggA)
LTQ03_02625	COG2890	protein-(glutamine-N5) methyltransferase activity
LTQ03_02630	COG2840	Smr protein MutS2
LTQ03_02635	COG2062	phosphohistidine phosphatase, SixA
LTQ03_02645	COG1024	Enoyl-CoA hydratase
LTQ03_02645	COG1250	3-hydroxyacyl-CoA dehydrogenase
LTQ03_02650	COG0183	Belongs to the thiolase family
LTQ03_02670	COG2067	long-chain fatty acid transport protein
LTQ03_02680	COG3088	subunit of a heme lyase
LTQ03_02680	COG4235	cytochrome complex assembly
LTQ03_02690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LTQ03_02695	COG1138	Cytochrome C-type biogenesis protein
LTQ03_02700	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
LTQ03_02705	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ03_02710	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ03_02715	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LTQ03_02720	COG4133	protoheme IX ABC transporter activity
LTQ03_02730	COG0835	chemotaxis
LTQ03_02740	COG1192	Involved in chromosome partitioning
LTQ03_02745	COG2201	protein-glutamate methylesterase activity
LTQ03_02750	COG2198	Histidine kinase
LTQ03_02750	COG0784	Response regulator, receiver
LTQ03_02750	COG0643	Histidine kinase
LTQ03_02755	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LTQ03_02790	COG1684	flagellar biosynthetic protein fliR
LTQ03_02795	COG1987	bacterial-type flagellum assembly
LTQ03_02845	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LTQ03_02855	COG1677	Flagellar hook-basal body complex protein FliE
LTQ03_02875	COG1516	flagellar protein fliS
LTQ03_02885	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LTQ03_02895	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ03_02900	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ03_02920	COG1705	Flagellar rod assembly protein muramidase FlgJ
LTQ03_02920	COG3951	Flagellar rod assembly protein muramidase FlgJ
LTQ03_02925	COG1706	bacterial-type flagellum-dependent cell motility
LTQ03_02930	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LTQ03_02940	COG4787	bacterial-type flagellum-dependent cell motility
LTQ03_02945	COG1749	Flagellar hook protein flgE
LTQ03_02955	COG1558	bacterial-type flagellum-dependent cell motility
LTQ03_02960	COG1815	bacterial-type flagellum-dependent cell motility
LTQ03_02965	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LTQ03_02970	COG0835	chemotaxis
LTQ03_02970	COG0784	Response regulator, receiver
LTQ03_02975	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
LTQ03_03035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LTQ03_03040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LTQ03_03060	COG1216	Glycosyl transferase, family 2
LTQ03_03065	COG2986	histidine ammonia-lyase
LTQ03_03100	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_03115	COG2217	Heavy metal translocating P-type atpase
LTQ03_03115	COG2608	mercury ion transmembrane transporter activity
LTQ03_03155	COG2840	Smr protein MutS2
LTQ03_03160	COG1187	pseudouridine synthase activity
LTQ03_03165	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LTQ03_03175	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LTQ03_03180	COG2912	Transglutaminase-like superfamily
LTQ03_03185	COG3094	Invasion gene expression up-regulator, SirB
LTQ03_03190	COG2890	protein-(glutamine-N5) methyltransferase activity
LTQ03_03195	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LTQ03_03200	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LTQ03_03205	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LTQ03_03210	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LTQ03_03215	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LTQ03_03220	COG0193	aminoacyl-tRNA hydrolase activity
LTQ03_03315	COG2706	6-phosphogluconolactonase activity
LTQ03_03320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ03_03330	COG1702	phosphate starvation-inducible protein PhoH
LTQ03_03335	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LTQ03_03340	COG4535	Mg2 and Co2 transporter CorC
LTQ03_03345	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LTQ03_03350	COG2888	peptidyl-tyrosine sulfation
LTQ03_03355	COG0495	leucyl-tRNA aminoacylation
LTQ03_03360	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LTQ03_03365	COG1466	dna polymerase III delta subunit
LTQ03_03370	COG0799	negative regulation of ribosome biogenesis
LTQ03_03375	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LTQ03_03380	COG0768	penicillin binding
LTQ03_03385	COG0772	Belongs to the SEDS family
LTQ03_03390	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LTQ03_03395	COG1686	Belongs to the peptidase S11 family
LTQ03_03405	COG0321	lipoyl(octanoyl) transferase activity
LTQ03_03410	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LTQ03_03415	COG0733	neurotransmitter:sodium symporter activity
LTQ03_03435	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LTQ03_03445	COG2991	Protein conserved in bacteria
LTQ03_03450	COG1477	protein flavinylation
LTQ03_03455	COG2871	sodium ion transport
LTQ03_03460	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ03_03465	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ03_03475	COG1805	sodium ion transport
LTQ03_03480	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LTQ03_03485	COG0271	Belongs to the BolA IbaG family
LTQ03_03490	COG2813	Specifically methylates the guanine in position
LTQ03_03500	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LTQ03_03505	COG2211	Major facilitator Superfamily
LTQ03_03515	COG3248	Nucleoside-binding outer membrane protein
LTQ03_03520	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LTQ03_03525	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LTQ03_03530	COG2166	iron-sulfur cluster assembly
LTQ03_03535	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LTQ03_03540	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LTQ03_03550	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LTQ03_03550	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LTQ03_03560	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LTQ03_03565	COG1074	ATP-dependent DNA helicase activity
LTQ03_03575	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LTQ03_03585	COG0583	DNA-binding transcription factor activity
LTQ03_03590	COG3141	response to X-ray
LTQ03_03605	COG2095	MarC family integral membrane protein
LTQ03_03610	COG2171	N-acyltransferase activity
LTQ03_03620	COG0047	phosphoribosylformylglycinamidine synthase activity
LTQ03_03620	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LTQ03_03635	COG1253	flavin adenine dinucleotide binding
LTQ03_03640	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LTQ03_03675	COG0484	heat shock protein binding
LTQ03_03680	COG0443	Heat shock 70 kDa protein
LTQ03_03695	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LTQ03_03700	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LTQ03_03705	COG0497	DNA recombination
LTQ03_03710	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ03_03715	COG2914	Belongs to the UPF0125 (RnfH) family
LTQ03_03720	COG2867	negative regulation of translational initiation
LTQ03_03735	COG0189	ligase activity
LTQ03_03735	COG4067	protein conserved in archaea
LTQ03_03750	COG2391	methyltransferase activity
LTQ03_03760	COG0204	Acyl-transferase
LTQ03_03765	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
LTQ03_03770	COG1115	amino acid carrier protein
LTQ03_03775	COG1584	GPR1 FUN34 yaaH family protein
LTQ03_03780	COG1757	Na H antiporter
LTQ03_03790	COG0519	Catalyzes the synthesis of GMP from XMP
LTQ03_03790	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LTQ03_03795	COG0516	GMP reductase activity
LTQ03_03795	COG0517	IMP dehydrogenase activity
LTQ03_03800	COG1570	exodeoxyribonuclease VII activity
LTQ03_03805	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LTQ03_03820	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LTQ03_03825	COG0804	urea catabolic process
LTQ03_03830	COG0832	Belongs to the urease beta subunit family
LTQ03_03835	COG0831	urea catabolic process
LTQ03_03875	COG3706	GGDEF domain
LTQ03_03880	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LTQ03_03885	COG1160	GTP binding
LTQ03_03890	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ03_03895	COG2976	Protein conserved in bacteria
LTQ03_03900	COG0124	histidyl-tRNA synthetase
LTQ03_03905	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LTQ03_03910	COG1426	Protein conserved in bacteria
LTQ03_03915	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LTQ03_03920	COG0105	UTP biosynthetic process
LTQ03_03925	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LTQ03_03930	COG2975	iron-sulfur cluster assembly
LTQ03_03940	COG0443	Heat shock 70 kDa protein
LTQ03_03945	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LTQ03_03955	COG0822	iron-sulfur transferase activity
LTQ03_03960	COG1104	cysteine desulfurase activity
LTQ03_03965	COG1959	2 iron, 2 sulfur cluster binding
LTQ03_03970	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LTQ03_03975	COG0483	inositol monophosphate 1-phosphatase activity
LTQ03_03980	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_03985	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_03990	COG1862	Preprotein translocase
LTQ03_03995	COG0343	queuine tRNA-ribosyltransferase activity
LTQ03_04000	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LTQ03_04005	COG0517	IMP dehydrogenase activity
LTQ03_04010	COG0840	transmembrane signaling receptor activity
LTQ03_04015	COG0583	DNA-binding transcription factor activity
LTQ03_04020	COG0450	alkyl hydroperoxide reductase
LTQ03_04025	COG3142	Participates in the control of copper homeostasis
LTQ03_04045	COG0704	Plays a role in the regulation of phosphate uptake
LTQ03_04050	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LTQ03_04055	COG0581	inorganic phosphate transmembrane transporter activity
LTQ03_04060	COG0573	inorganic phosphate transmembrane transporter activity
LTQ03_04065	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LTQ03_04070	COG0248	Ppx GppA phosphatase
LTQ03_04080	COG5002	protein histidine kinase activity
LTQ03_04085	COG0745	RESPONSE REGULATOR receiver
LTQ03_04090	COG2974	May be involved in recombination
LTQ03_04105	COG2252	PERMEase
LTQ03_04110	COG0826	peptidase U32
LTQ03_04115	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ03_04125	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
LTQ03_04180	COG0564	pseudouridine synthase activity
LTQ03_04185	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ03_04190	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LTQ03_04195	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LTQ03_04200	COG1605	Chorismate mutase
LTQ03_04200	COG0077	Prephenate dehydratase
LTQ03_04205	COG5001	Diguanylate cyclase
LTQ03_04210	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LTQ03_04215	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LTQ03_04225	COG0488	(ABC) transporter
LTQ03_04235	COG0739	heme binding
LTQ03_04240	COG1605	Chorismate mutase
LTQ03_04240	COG0287	Prephenate dehydrogenase
LTQ03_04245	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ03_04255	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LTQ03_04260	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LTQ03_04270	COG1966	Carbon starvation protein
LTQ03_04275	COG3275	phosphorelay sensor kinase activity
LTQ03_04280	COG3279	Response regulator of the LytR AlgR family
LTQ03_04285	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LTQ03_04290	COG1047	Peptidyl-prolyl cis-trans
LTQ03_04300	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LTQ03_04305	COG0196	riboflavin kinase activity
LTQ03_04310	COG0728	peptidoglycan biosynthetic process
LTQ03_04315	COG0268	Binds directly to 16S ribosomal RNA
LTQ03_04320	COG0640	Transcriptional regulator
LTQ03_04325	COG0583	DNA-binding transcription factor activity
LTQ03_04330	COG1283	sodium-dependent phosphate transmembrane transporter activity
LTQ03_04340	COG0745	RESPONSE REGULATOR receiver
LTQ03_04345	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LTQ03_04350	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LTQ03_04355	COG0730	response to heat
LTQ03_04365	COG0494	nUDIX hydrolase
LTQ03_04390	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LTQ03_04400	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LTQ03_04405	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ03_04410	COG4974	Belongs to the 'phage' integrase family
LTQ03_04415	COG0716	FMN binding
LTQ03_04425	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LTQ03_04430	COG0513	Belongs to the DEAD box helicase family
LTQ03_04435	COG3022	response to hydroperoxide
LTQ03_04440	COG1115	amino acid carrier protein
LTQ03_04455	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LTQ03_04460	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LTQ03_04465	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LTQ03_04470	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LTQ03_04475	COG0083	homoserine kinase activity
LTQ03_04490	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ03_04495	COG0745	RESPONSE REGULATOR receiver
LTQ03_04505	COG0784	Response regulator, receiver
LTQ03_04505	COG2198	Histidine kinase
LTQ03_04505	COG5002	protein histidine kinase activity
LTQ03_04510	COG3706	GGDEF domain
LTQ03_04510	COG2203	Gaf domain
LTQ03_04510	COG5001	Diguanylate cyclase
LTQ03_04510	COG4251	negative regulation of phosphorylation
LTQ03_04515	COG1242	4 iron, 4 sulfur cluster binding
LTQ03_04520	COG0070	glutamate synthase
LTQ03_04520	COG0069	glutamate synthase activity
LTQ03_04520	COG0067	glutamate synthase
LTQ03_04530	COG0070	glutamate synthase
LTQ03_04530	COG0069	glutamate synthase activity
LTQ03_04530	COG0067	glutamate synthase
LTQ03_04535	COG0493	'glutamate synthase
LTQ03_04545	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LTQ03_04555	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ03_04560	COG2860	membrane
LTQ03_04575	COG0583	DNA-binding transcription factor activity
LTQ03_04580	COG0730	response to heat
LTQ03_04585	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LTQ03_04590	COG0505	Belongs to the CarA family
LTQ03_04595	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LTQ03_04600	COG0494	nUDIX hydrolase
LTQ03_04605	COG0653	protein targeting
LTQ03_04610	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LTQ03_04615	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LTQ03_04620	COG0849	cell division
LTQ03_04625	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LTQ03_04630	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LTQ03_04635	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LTQ03_04640	COG0772	Belongs to the SEDS family
LTQ03_04645	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LTQ03_04650	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LTQ03_04655	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LTQ03_04660	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LTQ03_04665	COG0768	penicillin binding
LTQ03_04670	COG3116	cell division
LTQ03_04675	COG0275	rRNA processing
LTQ03_04685	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LTQ03_04700	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LTQ03_04710	COG2969	positive regulation of protein catabolic process
LTQ03_04715	COG0625	glutathione transferase activity
LTQ03_04720	COG2857	Cytochrome c1
LTQ03_04725	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LTQ03_04730	COG0723	plastoquinol--plastocyanin reductase activity
LTQ03_04735	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LTQ03_04740	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LTQ03_04745	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LTQ03_04750	COG3105	Protein conserved in bacteria
LTQ03_04760	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LTQ03_04775	COG3150	esterase
LTQ03_04785	COG3151	Protein conserved in bacteria
LTQ03_04790	COG0494	nUDIX hydrolase
LTQ03_04795	COG1538	Outer membrane efflux protein
LTQ03_04800	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LTQ03_04800	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LTQ03_04805	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LTQ03_04815	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LTQ03_04820	COG3025	triphosphatase activity
LTQ03_04825	COG1392	Phosphate transport regulator
LTQ03_04830	COG0306	phosphate transporter
LTQ03_04835	COG4991	sh3 domain protein
LTQ03_04845	COG3267	Type II secretory pathway component ExeA
LTQ03_04845	COG3409	Peptidoglycan-binding domain 1 protein
LTQ03_04850	COG0617	tRNA 3'-terminal CCA addition
LTQ03_04855	COG1968	undecaprenyl-diphosphatase activity
LTQ03_04860	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ03_04865	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LTQ03_04870	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LTQ03_04875	COG0596	Alpha beta hydrolase
LTQ03_04880	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LTQ03_04885	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LTQ03_04890	COG1610	YqeY-like protein
LTQ03_04910	COG2873	o-acetylhomoserine
LTQ03_04915	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LTQ03_04920	COG1349	DNA-binding transcription factor activity
LTQ03_04925	COG0469	pyruvate kinase activity
LTQ03_04930	COG1802	Transcriptional regulator
LTQ03_04935	COG3706	GGDEF domain
LTQ03_04945	COG0028	Belongs to the TPP enzyme family
LTQ03_04950	COG1022	Amp-dependent synthetase and ligase
LTQ03_04985	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LTQ03_04990	COG0473	3-isopropylmalate dehydrogenase activity
LTQ03_05000	COG0066	3-isopropylmalate dehydratase activity
LTQ03_05015	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LTQ03_05020	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LTQ03_05025	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ03_05030	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LTQ03_05035	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LTQ03_05040	COG2967	ApaG domain
LTQ03_05055	COG3610	response to peptide
LTQ03_05060	COG2966	Psort location CytoplasmicMembrane, score
LTQ03_05065	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LTQ03_05070	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LTQ03_05075	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LTQ03_05080	COG0142	geranyltranstransferase activity
LTQ03_05090	COG0039	L-malate dehydrogenase activity
LTQ03_05095	COG1438	arginine binding
LTQ03_05110	COG0589	response to stress
LTQ03_05115	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LTQ03_05130	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LTQ03_05135	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LTQ03_05140	COG0312	modulator of DNA gyrase
LTQ03_05145	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LTQ03_05160	COG0424	maF-like protein
LTQ03_05165	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LTQ03_05170	COG1792	Involved in formation and maintenance of cell shape
LTQ03_05175	COG1077	Cell shape determining protein MreB Mrl
LTQ03_05210	COG2165	general secretion pathway protein
LTQ03_05220	COG1459	type II secretion system
LTQ03_05225	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ03_05235	COG3409	Peptidoglycan-binding domain 1 protein
LTQ03_05235	COG3267	Type II secretory pathway component ExeA
LTQ03_05260	COG2200	EAL domain
LTQ03_05260	COG2199	diguanylate cyclase activity
LTQ03_05265	COG0629	single-stranded DNA binding
LTQ03_05270	COG2197	response regulator
LTQ03_05280	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LTQ03_05290	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LTQ03_05295	COG0527	aspartate kinase activity
LTQ03_05385	COG0175	sulfate reduction
LTQ03_05390	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ03_05395	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LTQ03_05420	COG0583	DNA-binding transcription factor activity
LTQ03_05430	COG0735	belongs to the Fur family
LTQ03_05440	COG0166	Belongs to the GPI family
LTQ03_05445	COG0432	Pfam Uncharacterised protein family UPF0047
LTQ03_05455	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LTQ03_05470	COG0359	binds to the 23S rRNA
LTQ03_05480	COG0360	Binds together with S18 to 16S ribosomal RNA
LTQ03_05485	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LTQ03_05490	COG0557	exoribonuclease II activity
LTQ03_05495	COG0402	S-adenosylhomocysteine deaminase activity
LTQ03_05500	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LTQ03_05505	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LTQ03_05510	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LTQ03_05515	COG0330	HflC and HflK could
LTQ03_05520	COG0330	HflC and HflK could
LTQ03_05525	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LTQ03_05530	COG1923	regulation of RNA biosynthetic process
LTQ03_05535	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LTQ03_05540	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LTQ03_05545	COG0860	N-Acetylmuramoyl-L-alanine amidase
LTQ03_05550	COG0802	atpase or kinase
LTQ03_05555	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LTQ03_05650	COG1162	GTPase activity
LTQ03_05660	COG0471	metal ion transport
LTQ03_05660	COG0490	domain, Protein
LTQ03_05665	COG0840	transmembrane signaling receptor activity
LTQ03_05675	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LTQ03_05680	COG1053	succinate dehydrogenase
LTQ03_05685	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LTQ03_05690	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LTQ03_05700	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LTQ03_05705	COG1509	lysine 2,3-aminomutase activity
LTQ03_05710	COG1285	pathogenesis
LTQ03_05715	COG2199	diguanylate cyclase activity
LTQ03_05715	COG2203	Gaf domain
LTQ03_05735	COG0534	Mate efflux family protein
LTQ03_05755	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LTQ03_05785	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LTQ03_05795	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LTQ03_05795	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LTQ03_05800	COG0367	asparagine synthase
LTQ03_05810	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LTQ03_05840	COG1088	dTDP-glucose 4,6-dehydratase activity
LTQ03_05845	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LTQ03_05855	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LTQ03_05865	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LTQ03_05870	COG0438	transferase activity, transferring glycosyl groups
LTQ03_05895	COG0438	transferase activity, transferring glycosyl groups
LTQ03_05940	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LTQ03_05970	COG1596	polysaccharide export
LTQ03_05975	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LTQ03_05995	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ03_06000	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LTQ03_06010	COG1045	serine acetyltransferase
LTQ03_06015	COG4942	peptidase
LTQ03_06035	COG1560	Kdo2-lipid A biosynthetic process
LTQ03_06040	COG0859	PFAM glycosyl transferase family 9
LTQ03_06050	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LTQ03_06070	COG1519	Transferase
LTQ03_06075	COG0438	transferase activity, transferring glycosyl groups
LTQ03_06085	COG3642	lipopolysaccharide core region biosynthetic process
LTQ03_06090	COG0859	PFAM glycosyl transferase family 9
LTQ03_06115	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LTQ03_06130	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LTQ03_06135	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LTQ03_06140	COG2003	Belongs to the UPF0758 family
LTQ03_06150	COG1309	transcriptional regulator
LTQ03_06155	COG1560	Kdo2-lipid A biosynthetic process
LTQ03_06160	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LTQ03_06165	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LTQ03_06170	COG1561	YicC-like family, N-terminal region
LTQ03_06175	COG1278	Cold shock
LTQ03_06190	COG2252	PERMEase
LTQ03_06195	COG0194	GDP metabolic process
LTQ03_06200	COG1758	RNA polymerase activity
LTQ03_06205	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LTQ03_06210	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LTQ03_06225	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LTQ03_06230	COG2183	response to ionizing radiation
LTQ03_06245	COG0596	Alpha beta hydrolase
LTQ03_06250	COG1040	competence protein
LTQ03_06255	COG0316	Belongs to the HesB IscA family
LTQ03_06255	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LTQ03_06260	COG0494	nUDIX hydrolase
LTQ03_06265	COG1218	3'(2'),5'-bisphosphate nucleotidase
LTQ03_06275	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LTQ03_06280	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
LTQ03_06285	COG3156	type II secretion system protein K
LTQ03_06290	COG4795	General secretion pathway protein
LTQ03_06295	COG2165	general secretion pathway protein
LTQ03_06300	COG2165	general secretion pathway protein
LTQ03_06305	COG2165	general secretion pathway protein
LTQ03_06310	COG1459	type II secretion system
LTQ03_06315	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ03_06325	COG3031	protein transport across the cell outer membrane
LTQ03_06330	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LTQ03_06340	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LTQ03_06350	COG0456	acetyltransferase
LTQ03_06355	COG1490	D-aminoacyl-tRNA deacylase activity
LTQ03_06360	COG1295	ribonuclease BN
LTQ03_06380	COG1217	gtp-binding protein TYPA
LTQ03_06385	COG0174	glutamine synthetase
LTQ03_06395	COG3852	Histidine kinase
LTQ03_06410	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LTQ03_06420	COG3078	GTPase activator activity
LTQ03_06445	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ03_06445	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ03_06460	COG0084	hydrolase, TatD family'
LTQ03_06465	COG0805	protein transport
LTQ03_06470	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LTQ03_06475	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LTQ03_06480	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LTQ03_06485	COG3165	ubiquinone biosynthetic process from chorismate
LTQ03_06490	COG2226	methyltransferase
LTQ03_06495	COG1322	Protein conserved in bacteria
LTQ03_06505	COG2081	HI0933 family
LTQ03_06515	COG1528	Iron-storage protein
LTQ03_06520	COG0589	response to stress
LTQ03_06535	COG0742	ribosomal rna small subunit methyltransferase
LTQ03_06540	COG5001	Diguanylate cyclase
LTQ03_06540	COG5002	protein histidine kinase activity
LTQ03_06545	COG1522	sequence-specific DNA binding
LTQ03_06555	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LTQ03_06560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ03_06620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ03_06625	COG0601	transmembrane transport
LTQ03_06675	COG1309	transcriptional regulator
LTQ03_06680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_06685	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_06690	COG2960	long-chain fatty acid transporting porin activity
LTQ03_06695	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LTQ03_06700	COG0583	DNA-binding transcription factor activity
LTQ03_06750	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LTQ03_06760	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LTQ03_06765	COG0408	coproporphyrinogen oxidase activity
LTQ03_06770	COG0009	L-threonylcarbamoyladenylate synthase
LTQ03_06775	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LTQ03_06780	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LTQ03_06785	COG0551	DNA topoisomerase type I activity
LTQ03_06790	COG2922	Belongs to the Smg family
LTQ03_06795	COG0758	DNA mediated transformation
LTQ03_06810	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LTQ03_06815	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LTQ03_06815	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LTQ03_06820	COG0569	domain protein
LTQ03_06825	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ03_06835	COG1272	protein, Hemolysin III
LTQ03_06840	COG4326	sporulation control protein
LTQ03_06850	COG3084	Protein conserved in bacteria
LTQ03_06860	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LTQ03_06865	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LTQ03_06875	COG0606	chelatase, subunit chli
LTQ03_06885	COG3978	acetolactate synthase activity
LTQ03_06890	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LTQ03_06895	COG0129	dihydroxy-acid dehydratase activity
LTQ03_06905	COG0583	DNA-binding transcription factor activity
LTQ03_06910	COG2814	Major facilitator Superfamily
LTQ03_06920	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LTQ03_06925	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LTQ03_06930	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LTQ03_06935	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LTQ03_06940	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LTQ03_06945	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LTQ03_06960	COG3312	ion transport
LTQ03_06965	COG1475	DNA binding
LTQ03_06970	COG1192	Involved in chromosome partitioning
LTQ03_06975	COG0357	Ribosomal RNA small subunit methyltransferase G
LTQ03_06980	COG0445	tRNA wobble uridine modification
LTQ03_06985	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LTQ03_06995	COG0706	membrane insertase activity
LTQ03_07000	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LTQ03_07005	COG0594	ribonuclease P activity
LTQ03_07010	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LTQ03_07015	COG1126	abc transporter atp-binding protein
LTQ03_07030	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LTQ03_07035	COG0592	DNA-directed DNA polymerase activity
LTQ03_07040	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LTQ03_07045	COG0187	DNA topoisomerase II activity
LTQ03_07055	COG3977	Valine--pyruvate aminotransferase
LTQ03_07060	COG0366	Alpha amylase catalytic
LTQ03_07065	COG0751	glycine-tRNA ligase activity
LTQ03_07070	COG0752	glycyl-tRNA synthetase alpha subunit
LTQ03_07075	COG2119	membrane
LTQ03_07085	COG0425	Belongs to the sulfur carrier protein TusA family
LTQ03_07100	COG0604	alcohol dehydrogenase
LTQ03_07105	COG0183	Belongs to the thiolase family
LTQ03_07110	COG1024	Enoyl-CoA hydratase
LTQ03_07110	COG1250	3-hydroxyacyl-CoA dehydrogenase
LTQ03_07115	COG1739	Uncharacterized protein family UPF0029
LTQ03_07120	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ03_07125	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LTQ03_07170	COG3335	DDE superfamily endonuclease
LTQ03_07175	COG2132	Multicopper oxidase
LTQ03_07185	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LTQ03_07190	COG0352	thiamine-phosphate diphosphorylase activity
LTQ03_07195	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LTQ03_07205	COG2022	thiamine diphosphate biosynthetic process
LTQ03_07215	COG0006	proline dipeptidase activity
LTQ03_07215	COG0006	proline dipeptidase activity
LTQ03_07245	COG3220	belongs to the UPF0276 family
LTQ03_07255	COG0210	DNA helicase
LTQ03_07265	COG0405	Gamma-glutamyltransferase
LTQ03_07270	COG1280	lysine exporter protein (LysE YggA)
LTQ03_07280	COG2962	Rard protein
LTQ03_07285	COG0514	ATP-dependent DNA helicase (RecQ)
LTQ03_07295	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LTQ03_07300	COG0248	Ppx GppA phosphatase
LTQ03_07305	COG0513	Belongs to the DEAD box helicase family
LTQ03_07310	COG3118	belongs to the thioredoxin family
LTQ03_07325	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LTQ03_07330	COG2871	sodium ion transport
LTQ03_07385	COG3071	HemY protein
LTQ03_07390	COG2959	enzyme of heme biosynthesis
LTQ03_07395	COG1587	Uroporphyrinogen-III synthase
LTQ03_07400	COG0181	hydroxymethylbilane synthase activity
LTQ03_07405	COG3072	Adenylate cyclase
LTQ03_07410	COG1965	Belongs to the frataxin family
LTQ03_07420	COG0019	diaminopimelate decarboxylase activity
LTQ03_07425	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LTQ03_07435	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LTQ03_07440	COG1011	Hydrolase
LTQ03_07445	COG2199	diguanylate cyclase activity
LTQ03_07445	COG3287	FIST C domain
LTQ03_07445	COG2200	EAL domain
LTQ03_07450	COG2200	EAL domain
LTQ03_07450	COG2199	diguanylate cyclase activity
LTQ03_07450	COG3287	FIST C domain
LTQ03_07455	COG3148	PFAM DTW domain containing protein
LTQ03_07470	COG0561	phosphatase activity
LTQ03_07475	COG2267	carboxylic ester hydrolase activity
LTQ03_07480	COG1280	lysine exporter protein (LysE YggA)
LTQ03_07485	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
LTQ03_07490	COG0640	Transcriptional regulator
LTQ03_07495	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LTQ03_07535	COG2095	MarC family integral membrane protein
LTQ03_07545	COG0742	ribosomal rna small subunit methyltransferase
LTQ03_07550	COG0552	protein localization to endoplasmic reticulum
LTQ03_07550	COG0552	protein localization to endoplasmic reticulum
LTQ03_07555	COG2884	Cell division ATP-binding protein ftsE
LTQ03_07560	COG2177	Part of the ABC transporter FtsEX involved in
LTQ03_07570	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ03_07575	COG0705	Rhomboid family
LTQ03_07585	COG1580	Controls the rotational direction of flagella during chemotaxis
LTQ03_07590	COG3161	chorismate lyase activity
LTQ03_07595	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LTQ03_07600	COG2937	Belongs to the GPAT DAPAT family
LTQ03_07605	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LTQ03_07610	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LTQ03_07615	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LTQ03_07620	COG0534	Mate efflux family protein
LTQ03_07625	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ03_07645	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LTQ03_07650	COG4206	TonB-dependent receptor
LTQ03_07660	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LTQ03_07765	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LTQ03_07775	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LTQ03_07785	COG1072	(Pantothenic acid kinase))
LTQ03_07815	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LTQ03_07820	COG0250	Participates in transcription elongation, termination and antitermination
LTQ03_07830	COG0081	regulation of translation
LTQ03_07835	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LTQ03_07840	COG0222	ribosome binding
LTQ03_07855	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LTQ03_07860	COG2816	NAD+ diphosphatase activity
LTQ03_07870	COG1573	uracil-dna glycosylase
LTQ03_07880	COG3068	Protein conserved in bacteria
LTQ03_07890	COG1253	flavin adenine dinucleotide binding
LTQ03_07910	COG0151	Belongs to the GarS family
LTQ03_07915	COG0138	bifunctional purine biosynthesis protein purh
LTQ03_07920	COG0789	Transcriptional regulator
LTQ03_07925	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LTQ03_07930	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LTQ03_07935	COG2264	protein methyltransferase activity
LTQ03_07940	COG0439	Biotin carboxylase
LTQ03_07945	COG0511	ligase activity, forming carbon-carbon bonds
LTQ03_07950	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LTQ03_07955	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LTQ03_07970	COG2814	Major facilitator Superfamily
LTQ03_07975	COG2205	protein histidine kinase activity
LTQ03_07975	COG0784	Response regulator, receiver
LTQ03_07975	COG2198	Histidine kinase
LTQ03_07990	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_08000	COG3263	regulation of cellular component size
LTQ03_08010	COG4232	protein-disulfide reductase activity
LTQ03_08015	COG1438	arginine binding
LTQ03_08020	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LTQ03_08025	COG0540	Belongs to the ATCase OTCase family
LTQ03_08030	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LTQ03_08045	COG1288	antiporter activity
LTQ03_08050	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LTQ03_08055	COG1027	Aspartate ammonia-lyase
LTQ03_08065	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LTQ03_08075	COG2205	protein histidine kinase activity
LTQ03_08080	COG0745	RESPONSE REGULATOR receiver
LTQ03_08090	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LTQ03_08110	COG3152	Membrane
LTQ03_08125	COG1494	fructose-1,6-bisphosphatase
LTQ03_08130	COG3074	FtsZ-dependent cytokinesis
LTQ03_08135	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ03_08140	COG1575	Belongs to the MenA family. Type 1 subfamily
LTQ03_08145	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LTQ03_08150	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LTQ03_08160	COG1609	Transcriptional regulator
LTQ03_08165	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LTQ03_08170	COG0254	rRNA binding
LTQ03_08175	COG0281	malic enzyme
LTQ03_08180	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
LTQ03_08185	COG0626	cystathionine gamma-synthase activity
LTQ03_08190	COG0527	aspartate kinase activity
LTQ03_08190	COG0460	homoserine dehydrogenase
LTQ03_08195	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LTQ03_08205	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LTQ03_08210	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ03_08215	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LTQ03_08230	COG0165	Argininosuccinate lyase
LTQ03_08230	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LTQ03_08240	COG0251	oxidation-reduction process
LTQ03_08245	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ03_08250	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LTQ03_08250	COG0678	peroxiredoxin activity
LTQ03_08265	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LTQ03_08300	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LTQ03_08310	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LTQ03_08315	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LTQ03_08320	COG0546	phosphoglycolate phosphatase activity
LTQ03_08325	COG0180	Tryptophanyl-tRNA synthetase
LTQ03_08335	COG0512	Glutamine amidotransferase of anthranilate synthase
LTQ03_08340	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LTQ03_08350	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_08360	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ03_08365	COG3954	Phosphoribulokinase
LTQ03_08370	COG3089	Belongs to the UPF0270 family
LTQ03_08375	COG0429	hydrolase of the alpha beta-hydrolase fold
LTQ03_08385	COG0488	(ABC) transporter
LTQ03_08390	COG2249	NAD(P)H dehydrogenase (quinone) activity
LTQ03_08405	COG1047	Peptidyl-prolyl cis-trans
LTQ03_08410	COG1446	asparaginase
LTQ03_08415	COG2900	Belongs to the SlyX family
LTQ03_08425	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ03_08430	COG2964	Protein conserved in bacteria
LTQ03_08435	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LTQ03_08440	COG2923	Belongs to the DsrF TusC family
LTQ03_08450	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LTQ03_08455	COG0049	tRNA binding
LTQ03_08460	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LTQ03_08475	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LTQ03_08480	COG0088	Forms part of the polypeptide exit tunnel
LTQ03_08485	COG0089	rRNA binding
LTQ03_08490	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LTQ03_08495	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LTQ03_08505	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LTQ03_08510	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LTQ03_08520	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LTQ03_08525	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LTQ03_08530	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LTQ03_08535	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LTQ03_08540	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LTQ03_08545	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LTQ03_08550	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LTQ03_08560	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LTQ03_08565	COG1841	ribosomal large subunit assembly
LTQ03_08570	COG0200	Binds to the 23S rRNA
LTQ03_08575	COG0201	protein transport
LTQ03_08580	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LTQ03_08585	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LTQ03_08590	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LTQ03_08595	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LTQ03_08600	COG0202	RNA polymerase activity
LTQ03_08605	COG0203	ribosomal protein L17
LTQ03_08615	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ03_08620	COG3061	Opacity-associated protein A
LTQ03_08620	COG3266	domain, Protein
LTQ03_08630	COG2153	protein acetylation
LTQ03_08680	COG0175	sulfate reduction
LTQ03_08685	COG2895	sulfate adenylyltransferase (ATP) activity
LTQ03_08690	COG3273	potassium ion transport
LTQ03_08690	COG0471	metal ion transport
LTQ03_08695	COG0529	Catalyzes the synthesis of activated sulfate
LTQ03_08730	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LTQ03_08740	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ03_08745	COG0729	surface antigen
LTQ03_08755	COG2105	PFAM AIG2 family protein
LTQ03_08760	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LTQ03_08765	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LTQ03_08770	COG0163	prenyltransferase activity
LTQ03_08775	COG4143	(ABC) transporter
LTQ03_08780	COG1178	ABC-type Fe3 transport system permease component
LTQ03_08785	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
LTQ03_08790	COG3028	Belongs to the UPF0307 family
LTQ03_08795	COG0312	modulator of DNA gyrase
LTQ03_08800	COG2239	Acts as a magnesium transporter
LTQ03_08805	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_08810	COG1660	Displays ATPase and GTPase activities
LTQ03_08815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_08820	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LTQ03_08830	COG1137	ATPase activity
LTQ03_08835	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LTQ03_08845	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LTQ03_08850	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LTQ03_08850	COG0517	IMP dehydrogenase activity
LTQ03_08860	COG1127	ABC transporter
LTQ03_08865	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LTQ03_08870	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LTQ03_08875	COG2854	intermembrane phospholipid transfer
LTQ03_08885	COG5007	Belongs to the BolA IbaG family
LTQ03_08890	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LTQ03_08895	COG0204	Acyl-transferase
LTQ03_08900	COG0251	oxidation-reduction process
LTQ03_08905	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
LTQ03_08935	COG0456	acetyltransferase
LTQ03_08945	COG0525	valine-tRNA ligase activity
LTQ03_08950	COG2927	DNA polymerase III (CHI subunit)
LTQ03_08955	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LTQ03_08960	COG0795	lipopolysaccharide-transporting ATPase activity
LTQ03_08965	COG0795	lipopolysaccharide-transporting ATPase activity
LTQ03_09080	COG0840	transmembrane signaling receptor activity
LTQ03_09120	COG0741	lytic transglycosylase activity
LTQ03_09125	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LTQ03_09140	COG2066	Belongs to the glutaminase family
LTQ03_09145	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LTQ03_09150	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LTQ03_09165	COG0762	integral membrane protein
LTQ03_09170	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LTQ03_09175	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LTQ03_09195	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LTQ03_09200	COG1678	Uncharacterized ACR, COG1678
LTQ03_09205	COG0189	ligase activity
LTQ03_09210	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LTQ03_09215	COG2356	endonuclease I
LTQ03_09220	COG3091	SprT-like family
LTQ03_09230	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LTQ03_09235	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LTQ03_09250	COG0191	fructose-bisphosphate aldolase activity
LTQ03_09255	COG0668	transmembrane transport
LTQ03_09260	COG1279	arginine transmembrane transporter activity
LTQ03_09275	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ03_09280	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LTQ03_09285	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LTQ03_09295	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LTQ03_09300	COG3079	Belongs to the UPF0149 family
LTQ03_09305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ03_09310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LTQ03_09325	COG0354	folic acid binding
LTQ03_09330	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LTQ03_09335	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LTQ03_09340	COG1595	DNA-templated transcription, initiation
LTQ03_09360	COG0481	GTPase activity
LTQ03_09370	COG0571	ribonuclease III activity
LTQ03_09375	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LTQ03_09380	COG1381	Involved in DNA repair and RecF pathway recombination
LTQ03_09385	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LTQ03_09390	COG0736	holo-[acyl-carrier-protein] synthase activity
LTQ03_09395	COG2205	protein histidine kinase activity
LTQ03_09395	COG3437	response regulator, receiver
LTQ03_09395	COG3850	Histidine kinase
LTQ03_09395	COG4999	Histidine kinase
LTQ03_09400	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LTQ03_09405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LTQ03_09410	COG3956	TIGRFAM MazG family protein
LTQ03_09415	COG0504	CTP synthase activity
LTQ03_09420	COG0148	phosphopyruvate hydratase activity
LTQ03_09435	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LTQ03_09440	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LTQ03_09450	COG0585	pseudouridine synthase activity
LTQ03_09455	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LTQ03_09460	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LTQ03_09470	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LTQ03_09475	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LTQ03_09480	COG1546	Belongs to the CinA family
LTQ03_09485	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LTQ03_09495	COG0527	aspartate kinase activity
LTQ03_09555	COG3630	sodium ion export across plasma membrane
LTQ03_09560	COG0511	ligase activity, forming carbon-carbon bonds
LTQ03_09560	COG5016	pyruvate
LTQ03_09565	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
LTQ03_09575	COG1238	metal cluster binding
LTQ03_09580	COG0612	Peptidase, M16
LTQ03_09585	COG2918	glutathione biosynthetic process
LTQ03_09595	COG1854	S-ribosylhomocysteine lyase activity
LTQ03_09600	COG4536	flavin adenine dinucleotide binding
LTQ03_09605	COG4137	Cytochrome C assembly protein
LTQ03_09610	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LTQ03_09615	COG0228	four-way junction DNA binding
LTQ03_09620	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LTQ03_09625	COG0336	Belongs to the RNA methyltransferase TrmD family
LTQ03_09630	COG0335	large ribosomal subunit rRNA binding
LTQ03_09640	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LTQ03_09645	COG0237	dephospho-CoA kinase activity
LTQ03_09655	COG1459	type II secretion system
LTQ03_09660	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LTQ03_09670	COG0157	Belongs to the NadC ModD family
LTQ03_09680	COG2186	Transcriptional regulator
LTQ03_09685	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LTQ03_09690	COG0508	dehydrogenase complex catalyzes the overall conversion of
LTQ03_09695	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LTQ03_09710	COG0288	reversible hydration of carbon dioxide
LTQ03_09715	COG0659	secondary active sulfate transmembrane transporter activity
LTQ03_09720	COG1131	(ABC) transporter
LTQ03_09725	COG0842	Transport permease protein
LTQ03_09730	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LTQ03_09735	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LTQ03_09740	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LTQ03_09760	COG1489	DNA binding
LTQ03_09765	COG1643	Atp-dependent helicase
LTQ03_09770	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LTQ03_09775	COG1752	Esterase of the alpha-beta hydrolase superfamily
LTQ03_09780	COG1049	propionate catabolic process, 2-methylcitrate cycle
LTQ03_09795	COG0004	ammonium transporteR
LTQ03_09800	COG1840	ABC-type Fe3 transport system, periplasmic component
LTQ03_09810	COG3842	ATPase activity
LTQ03_09815	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ03_09830	COG2971	BadF BadG BcrA BcrD
LTQ03_09840	COG4608	Belongs to the ABC transporter superfamily
LTQ03_09845	COG0444	Belongs to the ABC transporter superfamily
LTQ03_09850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ03_09860	COG0747	negative chemotaxis
LTQ03_09870	COG2813	Specifically methylates the guanine in position
LTQ03_09875	COG0628	permease
LTQ03_09880	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LTQ03_09885	COG0316	Belongs to the HesB IscA family
LTQ03_09900	COG0739	heme binding
LTQ03_09905	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LTQ03_09915	COG2239	Acts as a magnesium transporter
LTQ03_09920	COG2027	D-alanyl-D-alanine carboxypeptidase
LTQ03_09925	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LTQ03_09930	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LTQ03_09935	COG1534	Rna-binding protein
LTQ03_09940	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LTQ03_09945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LTQ03_09950	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LTQ03_09955	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ03_09960	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LTQ03_09975	COG0779	Required for maturation of 30S ribosomal subunits
LTQ03_09980	COG0195	Participates in both transcription termination and antitermination
LTQ03_09985	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LTQ03_09990	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LTQ03_09995	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LTQ03_10000	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LTQ03_10005	COG1185	polyribonucleotide nucleotidyltransferase activity
LTQ03_10020	COG0534	Mate efflux family protein
LTQ03_10025	COG0826	peptidase U32
LTQ03_10030	COG0826	peptidase U32
LTQ03_10040	COG3154	lipid carrier protein
LTQ03_10045	COG3153	acetyltransferase
LTQ03_10060	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LTQ03_10070	COG0084	hydrolase, TatD family'
LTQ03_10075	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ03_10080	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LTQ03_10085	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LTQ03_10095	COG0813	purine-nucleoside phosphorylase activity
LTQ03_10105	COG0560	Phosphoserine phosphatase
LTQ03_10115	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LTQ03_10120	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LTQ03_10125	COG4628	conserved protein (DUF2132)
LTQ03_10130	COG0583	DNA-binding transcription factor activity
LTQ03_10140	COG0583	DNA-binding transcription factor activity
LTQ03_10160	COG1022	Amp-dependent synthetase and ligase
LTQ03_10190	COG4964	Belongs to the GSP D family
LTQ03_10240	COG2059	Chromate
LTQ03_10245	COG0583	DNA-binding transcription factor activity
LTQ03_10255	COG1609	Transcriptional regulator
LTQ03_10265	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_10270	COG0534	Mate efflux family protein
LTQ03_10280	COG1175	transmembrane transport
LTQ03_10285	COG0395	ABC-type sugar transport system, permease component
LTQ03_10295	COG3250	beta-galactosidase activity
LTQ03_10300	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LTQ03_10300	COG3408	Glycogen debranching enzyme
LTQ03_10310	COG0531	amino acid
LTQ03_10315	COG0531	amino acid
LTQ03_10320	COG2731	YhcH YjgK YiaL family protein
LTQ03_10325	COG3250	beta-galactosidase activity
LTQ03_10330	COG1609	Transcriptional regulator
LTQ03_10335	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LTQ03_10340	COG1085	galactose-1-phosphate uridylyltransferase
LTQ03_10350	COG2017	converts alpha-aldose to the beta-anomer
LTQ03_10355	COG1609	Transcriptional regulator
LTQ03_10360	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_10375	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ03_10395	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ03_10400	COG2252	PERMEase
LTQ03_10405	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LTQ03_10410	COG1073	alpha beta
LTQ03_10425	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LTQ03_10430	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LTQ03_10435	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ03_10435	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ03_10455	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LTQ03_10460	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LTQ03_10465	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LTQ03_10475	COG3385	transposase activity
LTQ03_10480	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LTQ03_10485	COG0142	geranyltranstransferase activity
LTQ03_10490	COG1722	exodeoxyribonuclease VII activity
LTQ03_10495	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LTQ03_10505	COG0301	tRNA thio-modification
LTQ03_10505	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ03_10510	COG0583	DNA-binding transcription factor activity
LTQ03_10525	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LTQ03_10535	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LTQ03_10540	COG1611	Belongs to the LOG family
LTQ03_10555	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LTQ03_10555	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LTQ03_10565	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
LTQ03_10575	COG1464	Belongs to the NlpA lipoprotein family
LTQ03_10580	COG2011	ABC-type metal ion transport system permease component
LTQ03_10585	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LTQ03_10590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LTQ03_10600	COG1609	Transcriptional regulator
LTQ03_10605	COG1263	PTS System
LTQ03_10605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ03_10610	COG0366	Alpha amylase catalytic
LTQ03_10630	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LTQ03_10660	COG0442	prolyl-tRNA aminoacylation
LTQ03_10665	COG1720	tRNA m6t6A37 methyltransferase activity
LTQ03_10670	COG0254	rRNA binding
LTQ03_10680	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LTQ03_10690	COG1671	Belongs to the UPF0178 family
LTQ03_10715	COG3098	single-species biofilm formation
LTQ03_10720	COG0564	pseudouridine synthase activity
LTQ03_10730	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LTQ03_10735	COG0024	Methionine aminopeptidase
LTQ03_10740	COG0052	Belongs to the universal ribosomal protein uS2 family
LTQ03_10745	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LTQ03_10750	COG0528	UMP kinase activity
LTQ03_10755	COG0233	cytoplasmic translational termination
LTQ03_10760	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LTQ03_10765	COG0575	Belongs to the CDS family
LTQ03_10775	COG0750	zinc metalloprotease
LTQ03_10785	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
LTQ03_10790	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ03_10795	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LTQ03_10800	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LTQ03_10810	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LTQ03_10815	COG0587	DNA-directed DNA polymerase activity
LTQ03_10820	COG0825	malonyl-CoA metabolic process
LTQ03_10825	COG0037	tRNA processing
LTQ03_10835	COG0347	Belongs to the P(II) protein family
LTQ03_10840	COG3021	interspecies interaction between organisms
LTQ03_10850	COG1388	LysM domain
LTQ03_10850	COG0741	lytic transglycosylase activity
LTQ03_10855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LTQ03_10860	COG2226	methyltransferase
LTQ03_10865	COG0328	RNA-DNA hybrid ribonuclease activity
LTQ03_10870	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LTQ03_10885	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LTQ03_10890	COG0121	glutamine amidotransferase
LTQ03_10895	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LTQ03_10900	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LTQ03_10905	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LTQ03_10910	COG2233	PERMEase
LTQ03_10930	COG1393	Belongs to the ArsC family
LTQ03_10935	COG4783	chaperone-mediated protein folding
LTQ03_10950	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LTQ03_10955	COG2716	regulation of RNA biosynthetic process
LTQ03_10960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LTQ03_10965	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LTQ03_10980	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ03_10985	COG1393	Belongs to the ArsC family
LTQ03_11010	COG2837	iron assimilation
LTQ03_11015	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ03_11020	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LTQ03_11025	COG2190	(PTS) system
LTQ03_11035	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_11045	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LTQ03_11055	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LTQ03_11070	COG0789	Transcriptional regulator
LTQ03_11080	COG0330	HflC and HflK could
LTQ03_11085	COG3118	belongs to the thioredoxin family
LTQ03_11090	COG0300	oxidoreductase activity
LTQ03_11095	COG1090	epimerase
LTQ03_11120	COG0622	Phosphoesterase
LTQ03_11135	COG3710	Transcriptional regulator
LTQ03_11140	COG0326	Molecular chaperone. Has ATPase activity
LTQ03_11145	COG0563	adenylate kinase activity
LTQ03_11150	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LTQ03_11155	COG3104	oligopeptide transport
LTQ03_11160	COG0250	Participates in transcription elongation, termination and antitermination
LTQ03_11165	COG0367	asparagine synthase
LTQ03_11170	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LTQ03_11170	COG4651	solute:proton antiporter activity
LTQ03_11175	COG1846	Transcriptional regulator
LTQ03_11175	COG1940	carbohydrate kinase activity
LTQ03_11180	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LTQ03_11185	COG1263	PTS System
LTQ03_11185	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ03_11190	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LTQ03_11215	COG0596	Alpha beta hydrolase
LTQ03_11220	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LTQ03_11225	COG0033	Phosphoglucomutase
LTQ03_11235	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LTQ03_11240	COG0372	Belongs to the citrate synthase family
LTQ03_11250	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LTQ03_11255	COG1053	succinate dehydrogenase
LTQ03_11265	COG0567	Dehydrogenase, E1 component
LTQ03_11270	COG0508	dehydrogenase complex catalyzes the overall conversion of
LTQ03_11275	COG0045	succinate-CoA ligase (ADP-forming) activity
LTQ03_11285	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LTQ03_11290	COG1121	(ABC) transporter
LTQ03_11295	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LTQ03_11305	COG1918	ferrous iron import across plasma membrane
LTQ03_11325	COG0018	arginyl-trna synthetase
LTQ03_11330	COG3102	Protein conserved in bacteria
LTQ03_11335	COG0788	formyltetrahydrofolate deformylase activity
LTQ03_11345	COG1199	ATP-dependent helicase activity
LTQ03_11350	COG1214	PFAM Peptidase M22, glycoprotease
LTQ03_11365	COG0596	Alpha beta hydrolase
LTQ03_11370	COG0318	PFAM AMP-dependent synthetase and ligase
LTQ03_11375	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LTQ03_11380	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LTQ03_11385	COG2894	cell division
LTQ03_11390	COG0850	regulation of cytokinetic process
LTQ03_11395	COG3100	YcgL domain-containing protein
LTQ03_11400	COG2951	lytic endotransglycosylase activity
LTQ03_11405	COG0583	DNA-binding transcription factor activity
LTQ03_11410	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ03_11420	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LTQ03_11430	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LTQ03_11435	COG2860	membrane
LTQ03_11440	COG3101	peptidyl-lysine hydroxylation
LTQ03_11450	COG0431	NADPH-dependent FMN reductase
LTQ03_11460	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LTQ03_11465	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ03_11470	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LTQ03_11480	COG0101	tRNA pseudouridine synthase activity
LTQ03_11485	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LTQ03_11490	COG0285	dihydrofolate synthase activity
LTQ03_11495	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LTQ03_11500	COG1286	toxin biosynthetic process
LTQ03_11505	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LTQ03_11510	COG0583	DNA-binding transcription factor activity
LTQ03_11515	COG0745	RESPONSE REGULATOR receiver
LTQ03_11520	COG2832	Protein of unknown function (DUF454)
LTQ03_11525	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LTQ03_11530	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LTQ03_11535	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LTQ03_11540	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LTQ03_11555	COG2983	Belongs to the UPF0260 family
LTQ03_11560	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LTQ03_11620	COG1785	Belongs to the alkaline phosphatase family
LTQ03_11640	COG2226	methyltransferase
LTQ03_11655	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LTQ03_11660	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ03_11670	COG3139	Protein of unknown function (DUF1315)
LTQ03_11675	COG0252	asparaginase activity
LTQ03_11680	COG0616	signal peptide processing
LTQ03_11685	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ03_11685	COG1902	pentaerythritol trinitrate reductase activity
LTQ03_11690	COG0778	Nitroreductase
LTQ03_11695	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LTQ03_11710	COG0123	including yeast histone deacetylase and acetoin utilization protein
LTQ03_11715	COG0840	transmembrane signaling receptor activity
LTQ03_11725	COG1959	2 iron, 2 sulfur cluster binding
LTQ03_11745	COG3083	sulfuric ester hydrolase activity
LTQ03_11750	COG3082	Protein of unknown function (DUF1414)
LTQ03_11755	COG3081	Nucleoid-associated protein
LTQ03_11770	COG1757	Na H antiporter
LTQ03_11775	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LTQ03_11780	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ03_11785	COG2095	MarC family integral membrane protein
LTQ03_11790	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_11790	COG1454	alcohol dehydrogenase
LTQ03_11810	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LTQ03_11820	COG2056	Na+-H+ antiporter family
LTQ03_11840	COG0346	lactoylglutathione lyase activity
LTQ03_11845	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LTQ03_11850	COG4660	Part of a membrane complex involved in electron transport
LTQ03_11855	COG4659	FMN binding
LTQ03_11860	COG4658	electron transport chain
LTQ03_11865	COG4656	Part of a membrane complex involved in electron transport
LTQ03_11870	COG2878	Part of a membrane complex involved in electron transport
LTQ03_11875	COG4657	Part of a membrane complex involved in electron transport
LTQ03_11885	COG0556	nucleotide-excision repair
LTQ03_11890	COG2204	response regulator
LTQ03_11895	COG2198	Histidine kinase
LTQ03_11900	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LTQ03_11905	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LTQ03_11910	COG0521	Mo-molybdopterin cofactor biosynthetic process
LTQ03_11915	COG0315	cyclic pyranopterin monophosphate synthase activity
LTQ03_11920	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LTQ03_11925	COG0314	molybdopterin synthase activity
LTQ03_11935	COG0601	transmembrane transport
LTQ03_11940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LTQ03_11945	COG0444	Belongs to the ABC transporter superfamily
LTQ03_11955	COG0435	Glutathione S-transferase
LTQ03_11960	COG0280	phosphate acetyltransferase
LTQ03_11960	COG0857	belongs to the CobB CobQ family
LTQ03_11965	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LTQ03_11970	COG3092	negative regulation of chromosome organization
LTQ03_11980	COG0366	Alpha amylase catalytic
LTQ03_11985	COG3706	GGDEF domain
LTQ03_11990	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LTQ03_11995	COG0653	protein targeting
LTQ03_12005	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LTQ03_12010	COG2186	Transcriptional regulator
LTQ03_12020	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_12020	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_12025	COG0489	protein tyrosine kinase activity
LTQ03_12030	COG0572	uridine kinase
LTQ03_12035	COG2982	Protein involved in outer membrane biogenesis
LTQ03_12045	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
LTQ03_12050	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LTQ03_12055	COG0659	secondary active sulfate transmembrane transporter activity
LTQ03_12060	COG1530	ribonuclease E activity
LTQ03_12065	COG0564	pseudouridine synthase activity
LTQ03_12075	COG1399	metal-binding, possibly nucleic acid-binding protein
LTQ03_12080	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LTQ03_12085	COG0416	fatty acid biosynthetic process
LTQ03_12090	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LTQ03_12115	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LTQ03_12120	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LTQ03_12130	COG0470	DNA polymerase III
LTQ03_12135	COG0084	hydrolase, TatD family'
LTQ03_12140	COG1263	PTS System
LTQ03_12140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LTQ03_12160	COG4667	esterase of the alpha-beta hydrolase superfamily
LTQ03_12165	COG0469	pyruvate kinase activity
LTQ03_12170	COG1940	carbohydrate kinase activity
LTQ03_12175	COG0835	chemotaxis
LTQ03_12175	COG0784	Response regulator, receiver
LTQ03_12190	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LTQ03_12195	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_12200	COG0616	signal peptide processing
LTQ03_12205	COG2719	SpoVR family
LTQ03_12210	COG2718	Belongs to the UPF0229 family
LTQ03_12215	COG2766	serine protein kinase
LTQ03_12220	COG3713	MltA-interacting MipA family protein
LTQ03_12235	COG3013	Belongs to the UPF0304 family
LTQ03_12240	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LTQ03_12250	COG1882	Formate acetyltransferase
LTQ03_12280	COG4160	amino acid transport
LTQ03_12290	COG0708	Exodeoxyribonuclease III
LTQ03_12295	COG1770	oligopeptidase
LTQ03_12300	COG2814	Major facilitator Superfamily
LTQ03_12305	COG0840	transmembrane signaling receptor activity
LTQ03_12310	COG2850	peptidyl-arginine hydroxylation
LTQ03_12325	COG0730	response to heat
LTQ03_12330	COG1199	ATP-dependent helicase activity
LTQ03_12340	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LTQ03_12345	COG1187	pseudouridine synthase activity
LTQ03_12355	COG1278	Cold shock
LTQ03_12360	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LTQ03_12365	COG0542	response to heat
LTQ03_12370	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LTQ03_12375	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LTQ03_12380	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LTQ03_12390	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LTQ03_12400	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LTQ03_12405	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LTQ03_12410	COG0297	glycogen (starch) synthase activity
LTQ03_12430	COG3070	regulator of competence-specific genes
LTQ03_12435	COG1609	Transcriptional regulator
LTQ03_12440	COG3381	protein complex oligomerization
LTQ03_12445	COG0745	RESPONSE REGULATOR receiver
LTQ03_12450	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LTQ03_12455	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LTQ03_12460	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
LTQ03_12465	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
LTQ03_12470	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LTQ03_12475	COG3383	formate dehydrogenase (NAD+) activity
LTQ03_12490	COG0189	ligase activity
LTQ03_12490	COG4067	protein conserved in archaea
LTQ03_12495	COG0500	methyltransferase
LTQ03_12500	COG4106	trans-aconitate 2-methyltransferase activity
LTQ03_12505	COG1801	Protein of unknown function DUF72
LTQ03_12510	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LTQ03_12515	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LTQ03_12520	COG0840	transmembrane signaling receptor activity
LTQ03_12525	COG0632	four-way junction helicase activity
LTQ03_12530	COG2255	four-way junction helicase activity
LTQ03_12535	COG1271	oxidase subunit
LTQ03_12540	COG1294	oxidase, subunit
LTQ03_12545	COG4890	Cyd operon protein YbgT
LTQ03_12555	COG0824	Thioesterase
LTQ03_12560	COG0811	peptide transport
LTQ03_12575	COG0823	Involved in the tonB-independent uptake of proteins
LTQ03_12580	COG2885	chlorophyll binding
LTQ03_12585	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LTQ03_12590	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LTQ03_12605	COG0784	Response regulator, receiver
LTQ03_12605	COG5002	protein histidine kinase activity
LTQ03_12620	COG0786	glutamate:sodium symporter activity
LTQ03_12625	COG0583	DNA-binding transcription factor activity
LTQ03_12630	COG2194	sulfuric ester hydrolase activity
LTQ03_12655	COG1215	transferase activity, transferring glycosyl groups
LTQ03_12660	COG1215	transferase activity, transferring glycosyl groups
LTQ03_12665	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LTQ03_12670	COG0457	Tetratricopeptide repeat
LTQ03_12670	COG3118	belongs to the thioredoxin family
LTQ03_12675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ03_12695	COG0745	RESPONSE REGULATOR receiver
LTQ03_12700	COG0463	Glycosyl transferase, family 2
LTQ03_12715	COG1032	radical SAM domain protein
LTQ03_12730	COG0583	DNA-binding transcription factor activity
LTQ03_12735	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LTQ03_12745	COG2350	Protein conserved in bacteria
LTQ03_12750	COG1607	acyl-coa hydrolase
LTQ03_12755	COG2917	probably involved in intracellular septation
LTQ03_12770	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LTQ03_12785	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_12795	COG1301	dicarboxylic acid transport
LTQ03_12805	COG0330	HflC and HflK could
LTQ03_12810	COG0159	tryptophan synthase activity
LTQ03_12815	COG0133	tryptophan synthase activity
LTQ03_12820	COG0134	indole-3-glycerol-phosphate synthase activity
LTQ03_12820	COG0135	phosphoribosylanthranilate isomerase activity
LTQ03_12825	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LTQ03_12830	COG0512	Glutamine amidotransferase of anthranilate synthase
LTQ03_12835	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LTQ03_12845	COG0613	PHP domain protein
LTQ03_12850	COG0009	L-threonylcarbamoyladenylate synthase
LTQ03_12855	COG1187	pseudouridine synthase activity
LTQ03_12870	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LTQ03_12880	COG0417	DNA replication proofreading
LTQ03_12885	COG2197	response regulator
LTQ03_12890	COG0322	excinuclease ABC activity
LTQ03_12930	COG0019	diaminopimelate decarboxylase activity
LTQ03_12950	COG3302	dmso reductase anchor subunit
LTQ03_12955	COG0437	4 iron, 4 sulfur cluster binding
LTQ03_12960	COG0243	molybdopterin cofactor binding
LTQ03_12965	COG3381	protein complex oligomerization
LTQ03_12980	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LTQ03_12985	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LTQ03_12990	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LTQ03_13005	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LTQ03_13010	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LTQ03_13015	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
LTQ03_13020	COG0437	4 iron, 4 sulfur cluster binding
LTQ03_13025	COG3301	Polysulphide reductase, NrfD
LTQ03_13030	COG1138	Cytochrome C-type biogenesis protein
LTQ03_13040	COG3088	subunit of a heme lyase
LTQ03_13040	COG4235	cytochrome complex assembly
LTQ03_13050	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ03_13075	COG2989	Protein conserved in bacteria
LTQ03_13080	COG3108	Peptidase M15
LTQ03_13085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LTQ03_13100	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
LTQ03_13125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ03_13130	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ03_13135	COG0840	transmembrane signaling receptor activity
LTQ03_13140	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LTQ03_13145	COG4988	ABC transporter
LTQ03_13150	COG0492	ferredoxin-NADP+ reductase activity
LTQ03_13160	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LTQ03_13170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LTQ03_13185	COG2199	diguanylate cyclase activity
LTQ03_13185	COG2203	Gaf domain
LTQ03_13205	COG0471	metal ion transport
LTQ03_13210	COG2949	membrane
LTQ03_13220	COG1643	Atp-dependent helicase
LTQ03_13230	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LTQ03_13265	COG0247	lactate metabolic process
LTQ03_13265	COG0277	FAD linked oxidase domain protein
LTQ03_13280	COG2986	histidine ammonia-lyase
LTQ03_13285	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LTQ03_13290	COG0010	Belongs to the arginase family
LTQ03_13295	COG1228	amidohydrolase
LTQ03_13305	COG4326	sporulation control protein
LTQ03_13315	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LTQ03_13325	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LTQ03_13330	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LTQ03_13335	COG3097	Belongs to the UPF0267 family
LTQ03_13350	COG0488	(ABC) transporter
LTQ03_13355	COG1309	transcriptional regulator
LTQ03_13365	COG1166	arginine decarboxylase activity
LTQ03_13370	COG0010	Belongs to the arginase family
LTQ03_13380	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LTQ03_13385	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_13390	COG0800	Aldolase
LTQ03_13395	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_13400	COG1917	Cupin 2, conserved barrel domain protein
LTQ03_13425	COG3639	organic phosphonate transmembrane transporter activity
LTQ03_13430	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LTQ03_13440	COG2186	Transcriptional regulator
LTQ03_13455	COG3181	Tripartite tricarboxylate transporter family receptor
LTQ03_13465	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_13480	COG0840	transmembrane signaling receptor activity
LTQ03_13515	COG2186	Transcriptional regulator
LTQ03_13520	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_13525	COG2186	Transcriptional regulator
LTQ03_13530	COG0517	IMP dehydrogenase activity
LTQ03_13535	COG2176	DNA-directed DNA polymerase activity
LTQ03_13555	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_13580	COG3033	Beta-eliminating lyase
LTQ03_13640	COG0471	metal ion transport
LTQ03_13645	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ03_13645	COG4191	Histidine kinase
LTQ03_13670	COG0454	-acetyltransferase
LTQ03_13710	COG0730	response to heat
LTQ03_13740	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LTQ03_13745	COG1280	lysine exporter protein (LysE YggA)
LTQ03_13770	COG1115	amino acid carrier protein
LTQ03_13790	COG1115	amino acid carrier protein
LTQ03_13805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_13820	COG3290	protein histidine kinase activity
LTQ03_13825	COG4565	transcriptional regulatory protein
LTQ03_13830	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LTQ03_13835	COG0363	glucosamine-6-phosphate deaminase activity
LTQ03_13840	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LTQ03_13850	COG4628	conserved protein (DUF2132)
LTQ03_13880	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ03_13890	COG2814	Major facilitator Superfamily
LTQ03_13900	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LTQ03_13905	COG0372	Belongs to the citrate synthase family
LTQ03_13910	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LTQ03_13915	COG2828	Protein conserved in bacteria
LTQ03_13945	COG0561	phosphatase activity
LTQ03_13950	COG0602	queuosine metabolic process
LTQ03_13955	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LTQ03_13960	COG3706	GGDEF domain
LTQ03_13970	COG2885	chlorophyll binding
LTQ03_13990	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LTQ03_13995	COG0840	transmembrane signaling receptor activity
LTQ03_14000	COG1254	Belongs to the acylphosphatase family
LTQ03_14005	COG2920	part of a sulfur-relay system
LTQ03_14010	COG0670	Belongs to the BI1 family
LTQ03_14015	COG1126	abc transporter atp-binding protein
LTQ03_14020	COG0765	amino acid transport
LTQ03_14025	COG4597	amino acid ABC transporter
LTQ03_14030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ03_14040	COG1666	GTP binding
LTQ03_14045	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ03_14050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LTQ03_14050	COG0574	Belongs to the PEP-utilizing enzyme family
LTQ03_14065	COG2996	Protein conserved in bacteria
LTQ03_14070	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LTQ03_14070	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
LTQ03_14075	COG3008	intermembrane lipid transfer
LTQ03_14080	COG2995	paraquat-inducible protein a
LTQ03_14085	COG1132	(ABC) transporter
LTQ03_14090	COG1956	GAF domain-containing protein
LTQ03_14095	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
LTQ03_14110	COG0308	aminopeptidase N
LTQ03_14120	COG2902	Dehydrogenase
LTQ03_14125	COG0167	dihydroorotate dehydrogenase activity
LTQ03_14135	COG0116	Belongs to the methyltransferase superfamily
LTQ03_14135	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LTQ03_14145	COG0488	(ABC) transporter
LTQ03_14165	COG1067	ATP-dependent peptidase activity
LTQ03_14170	COG3120	sequence-specific DNA binding
LTQ03_14205	COG0784	Response regulator, receiver
LTQ03_14205	COG5002	protein histidine kinase activity
LTQ03_14220	COG3278	Belongs to the heme-copper respiratory oxidase family
LTQ03_14235	COG2010	Cytochrome c
LTQ03_14245	COG2217	Heavy metal translocating P-type atpase
LTQ03_14260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LTQ03_14265	COG0589	response to stress
LTQ03_14270	COG0037	tRNA processing
LTQ03_14290	COG3842	ATPase activity
LTQ03_14300	COG1177	transmembrane transport
LTQ03_14310	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LTQ03_14325	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LTQ03_14330	COG0004	ammonium transporteR
LTQ03_14345	COG0437	4 iron, 4 sulfur cluster binding
LTQ03_14350	COG3383	formate dehydrogenase (NAD+) activity
LTQ03_14350	COG0243	molybdopterin cofactor binding
LTQ03_14360	COG3381	protein complex oligomerization
LTQ03_14380	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LTQ03_14385	COG0840	transmembrane signaling receptor activity
LTQ03_14390	COG0488	(ABC) transporter
LTQ03_14405	COG0840	transmembrane signaling receptor activity
LTQ03_14410	COG4191	Histidine kinase
LTQ03_14425	COG4662	Binding-protein-dependent transport system inner membrane component
LTQ03_14430	COG3842	ATPase activity
LTQ03_14435	COG0746	molybdenum cofactor guanylyltransferase activity
LTQ03_14440	COG0303	'Molybdopterin
LTQ03_14450	COG1940	carbohydrate kinase activity
LTQ03_14455	COG3148	PFAM DTW domain containing protein
LTQ03_14465	COG0840	transmembrane signaling receptor activity
LTQ03_14470	COG0791	NLP P60 protein
LTQ03_14480	COG3001	Fructosamine kinase
LTQ03_14490	COG0307	riboflavin synthase, alpha
LTQ03_14495	COG0534	Mate efflux family protein
LTQ03_14500	COG1793	dna ligase
LTQ03_14510	COG2885	chlorophyll binding
LTQ03_14530	COG4176	ABC-type proline glycine betaine transport system permease component
LTQ03_14535	COG3448	diguanylate cyclase activity
LTQ03_14535	COG4175	Glycine betaine
LTQ03_14545	COG2204	response regulator
LTQ03_14550	COG0438	transferase activity, transferring glycosyl groups
LTQ03_14575	COG0438	transferase activity, transferring glycosyl groups
LTQ03_14580	COG1215	transferase activity, transferring glycosyl groups
LTQ03_14585	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LTQ03_14615	COG1742	UPF0060 membrane protein
LTQ03_14660	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LTQ03_14775	COG4160	amino acid transport
LTQ03_14780	COG4215	(ABC) transporter
LTQ03_14785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ03_14790	COG1126	abc transporter atp-binding protein
LTQ03_14805	COG3385	transposase activity
LTQ03_14810	COG0826	peptidase U32
LTQ03_14825	COG0786	glutamate:sodium symporter activity
LTQ03_14860	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_14870	COG0546	phosphoglycolate phosphatase activity
LTQ03_14875	COG0653	protein targeting
LTQ03_14920	COG0346	lactoylglutathione lyase activity
LTQ03_14955	COG0657	acetylesterase activity
LTQ03_14975	COG1051	belongs to the nudix hydrolase family
LTQ03_14985	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_14985	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LTQ03_15005	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LTQ03_15030	COG1280	lysine exporter protein (LysE YggA)
LTQ03_15035	COG0110	maltose O-acetyltransferase activity
LTQ03_15045	COG1187	pseudouridine synthase activity
LTQ03_15060	COG0494	nUDIX hydrolase
LTQ03_15080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LTQ03_15090	COG0584	glycerophosphoryl diester phosphodiesterase
LTQ03_15095	COG2271	Major facilitator Superfamily
LTQ03_15115	COG4774	siderophore transport
LTQ03_15135	COG4615	Cyclic peptide transporter
LTQ03_15145	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ03_15150	COG1120	ATPase activity
LTQ03_15170	COG0589	response to stress
LTQ03_15175	COG0415	Belongs to the DNA photolyase family
LTQ03_15180	COG3046	protein related to deoxyribodipyrimidine photolyase
LTQ03_15200	COG0419	ATPase involved in DNA repair
LTQ03_15205	COG0420	3'-5' exonuclease activity
LTQ03_15230	COG0454	-acetyltransferase
LTQ03_15235	COG3706	GGDEF domain
LTQ03_15240	COG2226	methyltransferase
LTQ03_15245	COG4771	TonB-dependent receptor
LTQ03_15255	COG3469	chitinase activity
LTQ03_15270	COG0840	transmembrane signaling receptor activity
LTQ03_15285	COG3119	arylsulfatase activity
LTQ03_15295	COG0583	DNA-binding transcription factor activity
LTQ03_15300	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LTQ03_15315	COG1733	regulation of RNA biosynthetic process
LTQ03_15330	COG1401	restriction endodeoxyribonuclease activity
LTQ03_15335	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
LTQ03_15340	COG0732	type I restriction modification DNA specificity domain
LTQ03_15345	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LTQ03_15350	COG1074	ATP-dependent DNA helicase activity
LTQ03_15375	COG3706	GGDEF domain
LTQ03_15380	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ03_15395	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
LTQ03_15400	COG3063	Type IV pilus biogenesis stability protein PilW
LTQ03_15410	COG1451	nucleotide metabolic process
LTQ03_15420	COG0583	DNA-binding transcription factor activity
LTQ03_15425	COG2814	Major facilitator Superfamily
LTQ03_15445	COG1247	-acetyltransferase
LTQ03_15490	COG1294	oxidase, subunit
LTQ03_15495	COG1271	oxidase subunit
LTQ03_15500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ03_15520	COG0604	alcohol dehydrogenase
LTQ03_15520	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_15520	COG3321	synthase
LTQ03_15530	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
LTQ03_15535	COG4139	cobalamin transport
LTQ03_15540	COG2988	succinylglutamate desuccinylase activity
LTQ03_15560	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
LTQ03_15565	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LTQ03_15570	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LTQ03_15580	COG1823	symporter activity
LTQ03_15605	COG0725	ABC transporter, periplasmic molybdate-binding protein
LTQ03_15610	COG4149	molybdate abc transporter
LTQ03_15615	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LTQ03_15630	COG5001	Diguanylate cyclase
LTQ03_15630	COG4251	negative regulation of phosphorylation
LTQ03_15630	COG3706	GGDEF domain
LTQ03_15630	COG2203	Gaf domain
LTQ03_15640	COG3706	GGDEF domain
LTQ03_15655	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LTQ03_15660	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LTQ03_15765	COG3140	Belongs to the UPF0181 family
LTQ03_15770	COG3706	GGDEF domain
LTQ03_15835	COG0023	Translation Initiation Factor
LTQ03_15850	COG1181	Belongs to the D-alanine--D-alanine ligase family
LTQ03_15855	COG3266	domain, Protein
LTQ03_15860	COG0045	succinate-CoA ligase (ADP-forming) activity
LTQ03_15860	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ03_15860	COG1042	CoA-binding domain protein
LTQ03_15865	COG0583	DNA-binding transcription factor activity
LTQ03_15870	COG4771	TonB-dependent receptor
LTQ03_15870	COG1629	transport
LTQ03_15880	COG5001	Diguanylate cyclase
LTQ03_15880	COG5002	protein histidine kinase activity
LTQ03_15880	COG3447	MASE1 domain protein
LTQ03_15900	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LTQ03_15905	COG1984	allophanate hydrolase subunit 2
LTQ03_15915	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LTQ03_15920	COG4181	ATPase activity
LTQ03_15930	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LTQ03_15935	COG1716	ATPase activity
LTQ03_15935	COG5001	Diguanylate cyclase
LTQ03_15945	COG0768	penicillin binding
LTQ03_15975	COG4533	DNA binding
LTQ03_15985	COG2050	protein possibly involved in aromatic compounds catabolism
LTQ03_15990	COG0501	Belongs to the peptidase M48B family
LTQ03_16000	COG2067	long-chain fatty acid transport protein
LTQ03_16005	COG2267	carboxylic ester hydrolase activity
LTQ03_16035	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LTQ03_16045	COG2985	domain, Protein
LTQ03_16070	COG2272	Belongs to the type-B carboxylesterase lipase family
LTQ03_16075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LTQ03_16085	COG0729	surface antigen
LTQ03_16090	COG0513	Belongs to the DEAD box helicase family
LTQ03_16105	COG0861	Integral membrane protein TerC family
LTQ03_16110	COG0737	Belongs to the 5'-nucleotidase family
LTQ03_16115	COG3593	DNA synthesis involved in DNA repair
LTQ03_16125	COG0583	DNA-binding transcription factor activity
LTQ03_16130	COG2116	formate transmembrane transporter activity
LTQ03_16135	COG2353	YceI-like domain
LTQ03_16140	COG3038	cytochrome b561
LTQ03_16155	COG2200	EAL domain
LTQ03_16180	COG0513	Belongs to the DEAD box helicase family
LTQ03_16185	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LTQ03_16190	COG0814	amino acid
LTQ03_16195	COG0840	transmembrane signaling receptor activity
LTQ03_16200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ03_16205	COG0784	Response regulator, receiver
LTQ03_16205	COG3437	response regulator, receiver
LTQ03_16220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_16225	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LTQ03_16230	COG3706	GGDEF domain
LTQ03_16235	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ03_16275	COG0509	glycine decarboxylation via glycine cleavage system
LTQ03_16295	COG0534	Mate efflux family protein
LTQ03_16310	COG0714	Associated with various cellular activities
LTQ03_16330	COG2304	oxidoreductase activity
LTQ03_16360	COG1280	lysine exporter protein (LysE YggA)
LTQ03_16400	COG2807	transmembrane transport
LTQ03_16410	COG1881	PFAM PEBP family protein
LTQ03_16415	COG5002	protein histidine kinase activity
LTQ03_16460	COG0840	transmembrane signaling receptor activity
LTQ03_16500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_16505	COG0784	Response regulator, receiver
LTQ03_16505	COG2205	protein histidine kinase activity
LTQ03_16510	COG1538	Outer membrane efflux protein
LTQ03_16515	COG1132	(ABC) transporter
LTQ03_16530	COG0784	Response regulator, receiver
LTQ03_16530	COG2205	protein histidine kinase activity
LTQ03_16530	COG5002	protein histidine kinase activity
LTQ03_16555	COG0840	transmembrane signaling receptor activity
LTQ03_16560	COG0405	Gamma-glutamyltransferase
LTQ03_16570	COG0641	radical SAM
LTQ03_16595	COG3300	MHYT domain
LTQ03_16595	COG5001	Diguanylate cyclase
LTQ03_16600	COG0583	DNA-binding transcription factor activity
LTQ03_16630	COG0714	Associated with various cellular activities
LTQ03_16640	COG3119	arylsulfatase activity
LTQ03_16645	COG3119	arylsulfatase activity
LTQ03_16655	COG2205	protein histidine kinase activity
LTQ03_16655	COG0784	Response regulator, receiver
LTQ03_16665	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LTQ03_16680	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ03_16685	COG2197	response regulator
LTQ03_16700	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
LTQ03_16725	COG0384	phenazine biosynthesis protein PhzF
LTQ03_16730	COG1280	lysine exporter protein (LysE YggA)
LTQ03_16740	COG3300	MHYT domain
LTQ03_16740	COG5001	Diguanylate cyclase
LTQ03_16760	COG3278	Belongs to the heme-copper respiratory oxidase family
LTQ03_16800	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ03_16810	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_16820	COG0583	DNA-binding transcription factor activity
LTQ03_16830	COG0356	it plays a direct role in the translocation of protons across the membrane
LTQ03_16845	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LTQ03_16855	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LTQ03_16865	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LTQ03_16875	COG0583	DNA-binding transcription factor activity
LTQ03_16895	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LTQ03_16905	COG1609	Transcriptional regulator
LTQ03_16910	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ03_16920	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_16920	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_16925	COG3842	ATPase activity
LTQ03_16935	COG1175	transmembrane transport
LTQ03_16940	COG0395	ABC-type sugar transport system, permease component
LTQ03_16980	COG1538	Outer membrane efflux protein
LTQ03_17015	COG0583	DNA-binding transcription factor activity
LTQ03_17030	COG1228	amidohydrolase
LTQ03_17045	COG4172	Belongs to the ABC transporter superfamily
LTQ03_17050	COG4239	(ABC) transporter, permease
LTQ03_17055	COG4174	ABC transporter (Permease)
LTQ03_17060	COG4166	transmembrane transport
LTQ03_17080	COG1869	D-ribose catabolic process
LTQ03_17085	COG1129	ABC transporter
LTQ03_17090	COG1172	Belongs to the binding-protein-dependent transport system permease family
LTQ03_17095	COG1879	ABC-type sugar transport system periplasmic component
LTQ03_17100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_17105	COG1609	Transcriptional regulator
LTQ03_17130	COG0583	DNA-binding transcription factor activity
LTQ03_17160	COG1192	Involved in chromosome partitioning
LTQ03_17180	COG0243	molybdopterin cofactor binding
LTQ03_17185	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ03_17195	COG2223	nitrite transmembrane transporter activity
LTQ03_17200	COG2815	serine threonine protein kinase
LTQ03_17200	COG0515	serine threonine protein kinase
LTQ03_17205	COG1609	Transcriptional regulator
LTQ03_17210	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_17210	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_17215	COG1105	Belongs to the carbohydrate kinase PfkB family
LTQ03_17220	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_17220	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LTQ03_17220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_17270	COG0625	glutathione transferase activity
LTQ03_17285	COG2223	nitrite transmembrane transporter activity
LTQ03_17330	COG1879	ABC-type sugar transport system periplasmic component
LTQ03_17335	COG1803	Methylglyoxal synthase
LTQ03_17345	COG0210	DNA helicase
LTQ03_17350	COG1289	transmembrane transporter activity
LTQ03_17370	COG0583	DNA-binding transcription factor activity
LTQ03_17375	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LTQ03_17380	COG1328	CTP reductase activity
LTQ03_17410	COG1011	Hydrolase
LTQ03_17420	COG1454	alcohol dehydrogenase
LTQ03_17485	COG1063	alcohol dehydrogenase
LTQ03_17490	COG0156	8-amino-7-oxononanoate synthase activity
LTQ03_17495	COG5001	Diguanylate cyclase
LTQ03_17495	COG3300	MHYT domain
LTQ03_17515	COG0346	lactoylglutathione lyase activity
LTQ03_17535	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LTQ03_17540	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ03_17555	COG0393	Putative heavy-metal-binding
LTQ03_17560	COG0739	heme binding
LTQ03_17585	COG1132	(ABC) transporter
LTQ03_17590	COG1132	(ABC) transporter
LTQ03_17605	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LTQ03_17625	COG1760	l-serine dehydratase
LTQ03_17635	COG3104	oligopeptide transport
LTQ03_17640	COG2375	cellular response to nickel ion
LTQ03_17645	COG1609	Transcriptional regulator
LTQ03_17650	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LTQ03_17655	COG3265	gluconokinase activity
LTQ03_17660	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_17670	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
LTQ03_17690	COG3842	ATPase activity
LTQ03_17695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ03_17700	COG1840	ABC-type Fe3 transport system, periplasmic component
LTQ03_17710	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LTQ03_17720	COG2885	chlorophyll binding
LTQ03_17730	COG1765	OsmC-like protein
LTQ03_17735	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ03_17735	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LTQ03_17740	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LTQ03_17745	COG0569	domain protein
LTQ03_17750	COG0668	transmembrane transport
LTQ03_17760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ03_17765	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LTQ03_17770	COG3530	Putative quorum-sensing-regulated virulence factor
LTQ03_17785	COG0109	protoheme IX farnesyltransferase activity
LTQ03_17790	COG1612	heme a metabolic process
LTQ03_17810	COG1845	cytochrome c oxidase, subunit III
LTQ03_17820	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LTQ03_17830	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LTQ03_17835	COG1280	lysine exporter protein (LysE YggA)
LTQ03_17840	COG0179	Fumarylacetoacetate (FAA) hydrolase
LTQ03_17850	COG0443	Heat shock 70 kDa protein
LTQ03_17880	COG2827	Endonuclease containing a URI domain
LTQ03_17885	COG3132	Protein of unknown function, DUF480
LTQ03_17895	COG2926	Belongs to the UPF0265 family
LTQ03_17920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ03_17925	COG1151	hydroxylamine reductase activity
LTQ03_17940	COG1280	lysine exporter protein (LysE YggA)
LTQ03_17955	COG0531	amino acid
LTQ03_17970	COG4413	Urea transporter
LTQ03_17990	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LTQ03_17995	COG0402	S-adenosylhomocysteine deaminase activity
LTQ03_18000	COG1278	Cold shock
LTQ03_18005	COG3706	GGDEF domain
LTQ03_18020	COG0513	Belongs to the DEAD box helicase family
LTQ03_18035	COG4106	trans-aconitate 2-methyltransferase activity
LTQ03_18040	COG2205	protein histidine kinase activity
LTQ03_18045	COG0745	RESPONSE REGULATOR receiver
LTQ03_18070	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LTQ03_18085	COG3037	sugar-specific permease SgaT UlaA
LTQ03_18095	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LTQ03_18100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LTQ03_18105	COG2205	protein histidine kinase activity
LTQ03_18110	COG0745	RESPONSE REGULATOR receiver
LTQ03_18115	COG5001	Diguanylate cyclase
LTQ03_18125	COG5001	Diguanylate cyclase
LTQ03_18135	COG1131	(ABC) transporter
LTQ03_18155	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ03_18155	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LTQ03_18165	COG0564	pseudouridine synthase activity
LTQ03_18180	COG0840	transmembrane signaling receptor activity
LTQ03_18185	COG2814	Major facilitator Superfamily
LTQ03_18195	COG3708	Transcriptional regulator
LTQ03_18195	COG2207	Transcriptional regulator
LTQ03_18205	COG1335	isochorismatase
LTQ03_18240	COG4934	collagen metabolic process
LTQ03_18270	COG3385	transposase activity
LTQ03_18285	COG0191	fructose-bisphosphate aldolase activity
LTQ03_18295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_18300	COG0673	inositol 2-dehydrogenase activity
LTQ03_18305	COG3962	Belongs to the TPP enzyme family
LTQ03_18315	COG2814	Major facilitator Superfamily
LTQ03_18315	COG0477	Major facilitator Superfamily
LTQ03_18320	COG0583	DNA-binding transcription factor activity
LTQ03_18330	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LTQ03_18340	COG3454	Phosphonate metabolism
LTQ03_18345	COG4778	phosphonate C-P lyase system protein PhnL
LTQ03_18350	COG4107	phosphonate C-P lyase system protein PhnK
LTQ03_18355	COG3627	carbon phosphorus lyase activity
LTQ03_18360	COG3626	phosphonate metabolism
LTQ03_18365	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LTQ03_18370	COG3624	Phosphonate C-P lyase system protein PhnG
LTQ03_18375	COG2188	Transcriptional regulator
LTQ03_18380	COG3639	organic phosphonate transmembrane transporter activity
LTQ03_18385	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LTQ03_18395	COG2964	Protein conserved in bacteria
LTQ03_18410	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ03_18515	COG1901	pseudouridine methyltransferase
LTQ03_18535	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LTQ03_18575	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ03_18585	COG0583	DNA-binding transcription factor activity
LTQ03_18590	COG2910	NAD(P)H-binding
LTQ03_18600	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_18605	COG1733	regulation of RNA biosynthetic process
LTQ03_18610	COG0583	DNA-binding transcription factor activity
LTQ03_18615	COG4221	oxidoreductase activity
LTQ03_18625	COG3047	cAMP biosynthetic process
LTQ03_18630	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LTQ03_18635	COG1288	antiporter activity
LTQ03_18660	COG3639	organic phosphonate transmembrane transporter activity
LTQ03_18665	COG3639	organic phosphonate transmembrane transporter activity
LTQ03_18670	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LTQ03_18685	COG2204	response regulator
LTQ03_18695	COG4948	Mandelate Racemase Muconate Lactonizing
LTQ03_18705	COG0583	DNA-binding transcription factor activity
LTQ03_18715	COG0366	Alpha amylase catalytic
LTQ03_18735	COG0583	DNA-binding transcription factor activity
LTQ03_18760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ03_18775	COG2814	Major facilitator Superfamily
LTQ03_18780	COG0814	amino acid
LTQ03_18785	COG1846	Transcriptional regulator
LTQ03_18790	COG1764	response to oxidative stress
LTQ03_18800	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_18810	COG0840	transmembrane signaling receptor activity
LTQ03_18825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18830	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18840	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_18845	COG2207	Transcriptional regulator
LTQ03_18850	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18850	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18850	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_18860	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18860	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_18860	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18865	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_18880	COG4166	transmembrane transport
LTQ03_18905	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LTQ03_18910	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LTQ03_18930	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_18935	COG3284	Transcriptional regulator
LTQ03_18940	COG0840	transmembrane signaling receptor activity
LTQ03_18965	COG2871	sodium ion transport
LTQ03_18980	COG2161	toxin-antitoxin pair type II binding
LTQ03_18985	COG4115	mRNA cleavage
LTQ03_18995	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LTQ03_19000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ03_19005	COG1418	mRNA catabolic process
LTQ03_19030	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LTQ03_19040	COG0402	S-adenosylhomocysteine deaminase activity
LTQ03_19050	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LTQ03_19055	COG0789	Transcriptional regulator
LTQ03_19070	COG2814	Major facilitator Superfamily
LTQ03_19080	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LTQ03_19105	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
LTQ03_19110	COG4266	Belongs to the allantoicase family
LTQ03_19130	COG2252	PERMEase
LTQ03_19155	COG0402	S-adenosylhomocysteine deaminase activity
LTQ03_19170	COG2199	diguanylate cyclase activity
LTQ03_19170	COG2200	EAL domain
LTQ03_19170	COG3287	FIST C domain
LTQ03_19175	COG0402	S-adenosylhomocysteine deaminase activity
LTQ03_19190	COG0745	RESPONSE REGULATOR receiver
LTQ03_19200	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LTQ03_19205	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_19210	COG2957	Belongs to the agmatine deiminase family
LTQ03_19220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ03_19225	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_19230	COG1396	sequence-specific DNA binding
LTQ03_19230	COG1917	Cupin 2, conserved barrel domain protein
LTQ03_19235	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LTQ03_19240	COG0174	glutamine synthetase
LTQ03_19245	COG1757	Na H antiporter
LTQ03_19265	COG2084	Dehydrogenase
LTQ03_19270	COG3622	Belongs to the hyi family
LTQ03_19275	COG3960	tartronate-semialdehyde synthase activity
LTQ03_19280	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LTQ03_19290	COG2259	Doxx family
LTQ03_19295	COG1846	Transcriptional regulator
LTQ03_19350	COG1067	ATP-dependent peptidase activity
LTQ03_19360	COG4172	Belongs to the ABC transporter superfamily
LTQ03_19390	COG1609	Transcriptional regulator
LTQ03_19400	COG2017	converts alpha-aldose to the beta-anomer
LTQ03_19405	COG3459	Glycosyltransferase 36 associated
LTQ03_19410	COG3842	ATPase activity
LTQ03_19415	COG2723	6-phospho-beta-galactosidase activity
LTQ03_19420	COG0395	ABC-type sugar transport system, permease component
LTQ03_19455	COG1505	serine-type exopeptidase activity
LTQ03_19460	COG0583	DNA-binding transcription factor activity
LTQ03_19465	COG1620	l-lactate permease
LTQ03_19470	COG1304	FMN binding
LTQ03_19490	COG0747	negative chemotaxis
LTQ03_19495	COG4172	Belongs to the ABC transporter superfamily
LTQ03_19505	COG0534	Mate efflux family protein
LTQ03_19510	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LTQ03_19510	COG2207	Transcriptional regulator
LTQ03_19515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LTQ03_19530	COG1054	Belongs to the UPF0176 family
LTQ03_19560	COG2271	Major facilitator Superfamily
LTQ03_19565	COG3851	Histidine kinase
LTQ03_19570	COG2197	response regulator
LTQ03_19595	COG1741	Belongs to the pirin family
LTQ03_19600	COG3123	guanosine phosphorylase activity
LTQ03_19615	COG0596	Alpha beta hydrolase
LTQ03_19660	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LTQ03_19665	COG0700	Nucleoside recognition
LTQ03_19670	COG3366	ferrous iron transmembrane transporter activity
LTQ03_19680	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LTQ03_19695	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LTQ03_19715	COG0363	glucosamine-6-phosphate deaminase activity
LTQ03_19725	COG3722	fumarate hydratase activity
LTQ03_19730	COG0246	Mannitol dehydrogenase
LTQ03_19735	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_19735	COG2213	PTS system mannitol-specific
LTQ03_19755	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ03_19760	COG0786	glutamate:sodium symporter activity
LTQ03_19775	COG1942	4-Oxalocrotonate Tautomerase
LTQ03_19785	COG1595	DNA-templated transcription, initiation
LTQ03_19790	COG3806	Anti-sigma factor
LTQ03_19800	COG0415	Belongs to the DNA photolyase family
LTQ03_19825	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LTQ03_19850	COG4221	oxidoreductase activity
LTQ03_19855	COG0724	RNA recognition motif
LTQ03_19865	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LTQ03_19885	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_19890	COG2814	Major facilitator Superfamily
LTQ03_19895	COG1902	pentaerythritol trinitrate reductase activity
LTQ03_19910	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_19915	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_19925	COG0612	Peptidase, M16
LTQ03_19930	COG0612	Peptidase, M16
LTQ03_19935	COG3279	Response regulator of the LytR AlgR family
LTQ03_19940	COG3275	phosphorelay sensor kinase activity
LTQ03_19955	COG4591	ABC-type transport system involved in lipoprotein release permease component
LTQ03_19995	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LTQ03_20000	COG2084	Dehydrogenase
LTQ03_20015	COG0217	transcriptional regulatory protein
LTQ03_20030	COG3186	Phenylalanine-4-hydroxylase
LTQ03_20035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LTQ03_20045	COG0625	glutathione transferase activity
LTQ03_20055	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LTQ03_20075	COG3842	ATPase activity
LTQ03_20115	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LTQ03_20115	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
LTQ03_20125	COG0444	Belongs to the ABC transporter superfamily
LTQ03_20130	COG4608	Belongs to the ABC transporter superfamily
LTQ03_20160	COG1444	tRNA N-acetyltransferase activity
LTQ03_20210	COG0259	pyridoxamine-phosphate oxidase activity
LTQ03_20235	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LTQ03_20265	COG4399	Belongs to the UPF0754 family
LTQ03_20270	COG1132	(ABC) transporter
LTQ03_20305	COG2194	sulfuric ester hydrolase activity
LTQ03_20335	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
LTQ03_20345	COG4145	pantothenate transmembrane transporter activity
LTQ03_20350	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_20355	COG0800	Aldolase
LTQ03_20370	COG2204	response regulator
LTQ03_20385	COG0579	oxidoreductase
LTQ03_20405	COG2205	protein histidine kinase activity
LTQ03_20410	COG0745	RESPONSE REGULATOR receiver
LTQ03_20425	COG1522	sequence-specific DNA binding
LTQ03_20435	COG1473	amidohydrolase
LTQ03_20440	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ03_20450	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_20460	COG1309	transcriptional regulator
LTQ03_20465	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_20485	COG4175	Glycine betaine
LTQ03_20490	COG1846	Transcriptional regulator
LTQ03_20520	COG0641	radical SAM
LTQ03_20525	COG1309	transcriptional regulator
LTQ03_20535	COG0456	acetyltransferase
LTQ03_20540	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_20545	COG2213	PTS system mannitol-specific
LTQ03_20550	COG1063	alcohol dehydrogenase
LTQ03_20560	COG1072	(Pantothenic acid kinase))
LTQ03_20565	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LTQ03_20580	COG2211	Major facilitator Superfamily
LTQ03_20585	COG1486	melibiose metabolic process
LTQ03_20590	COG2169	Transcriptional regulator
LTQ03_20605	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LTQ03_20610	COG0800	Aldolase
LTQ03_20620	COG3408	Glycogen debranching enzyme
LTQ03_20620	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LTQ03_20635	COG2207	Transcriptional regulator
LTQ03_20640	COG0110	maltose O-acetyltransferase activity
LTQ03_20645	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LTQ03_20665	COG3321	synthase
LTQ03_20665	COG0604	alcohol dehydrogenase
LTQ03_20665	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_20690	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LTQ03_20690	COG0646	methionine synthase
LTQ03_20805	COG1720	tRNA m6t6A37 methyltransferase activity
LTQ03_20825	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_20830	COG1024	Enoyl-CoA hydratase
LTQ03_20835	COG0534	Mate efflux family protein
LTQ03_20840	COG0583	DNA-binding transcription factor activity
LTQ03_20845	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LTQ03_20860	COG0346	lactoylglutathione lyase activity
LTQ03_20875	COG0737	Belongs to the 5'-nucleotidase family
LTQ03_20880	COG2723	6-phospho-beta-galactosidase activity
LTQ03_20885	COG1609	Transcriptional regulator
LTQ03_20890	COG0110	maltose O-acetyltransferase activity
LTQ03_20895	COG2814	Major facilitator Superfamily
LTQ03_20900	COG0583	DNA-binding transcription factor activity
LTQ03_20905	COG0641	radical SAM
LTQ03_20910	COG3119	arylsulfatase activity
LTQ03_20925	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LTQ03_20945	COG1794	racemase activity, acting on amino acids and derivatives
LTQ03_20955	COG0583	DNA-binding transcription factor activity
LTQ03_20960	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_20965	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LTQ03_20970	COG1349	DNA-binding transcription factor activity
LTQ03_20975	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LTQ03_20980	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LTQ03_21000	COG2828	Protein conserved in bacteria
LTQ03_21025	COG0583	DNA-binding transcription factor activity
LTQ03_21030	COG0798	PFAM Bile acid sodium symporter
LTQ03_21050	COG0561	phosphatase activity
LTQ03_21065	COG0583	DNA-binding transcription factor activity
LTQ03_21120	COG0561	phosphatase activity
LTQ03_21125	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LTQ03_21130	COG3623	hexulose-6-phosphate isomerase
LTQ03_21140	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LTQ03_21145	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LTQ03_21165	COG3623	hexulose-6-phosphate isomerase
LTQ03_21170	COG1414	Transcriptional regulator
LTQ03_21175	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LTQ03_21190	COG0561	phosphatase activity
LTQ03_21200	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ03_21205	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_21210	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_21220	COG1929	Belongs to the glycerate kinase type-1 family
LTQ03_21225	COG0753	catalase activity
LTQ03_21230	COG4667	esterase of the alpha-beta hydrolase superfamily
LTQ03_21235	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LTQ03_21245	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ03_21250	COG0204	Acyl-transferase
LTQ03_21255	COG2384	SAM-dependent methyltransferase
LTQ03_21295	COG0366	Alpha amylase catalytic
LTQ03_21335	COG3258	Cytochrome c
LTQ03_21365	COG4566	intracellular signal transduction
LTQ03_21375	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LTQ03_21380	COG1162	GTPase activity
LTQ03_21390	COG1999	signal sequence binding
LTQ03_21405	COG2909	trisaccharide binding
LTQ03_21410	COG0058	SHG alpha-glucan phosphorylase activity
LTQ03_21415	COG1640	4-alpha-glucanotransferase
LTQ03_21420	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LTQ03_21435	COG1122	ATPase activity
LTQ03_21440	COG4720	Psort location CytoplasmicMembrane, score
LTQ03_21445	COG1566	PFAM secretion protein HlyD family protein
LTQ03_21475	COG0813	purine-nucleoside phosphorylase activity
LTQ03_21480	COG1376	ErfK ybiS ycfS ynhG family protein
LTQ03_21480	COG1388	LysM domain
LTQ03_21490	COG0513	Belongs to the DEAD box helicase family
LTQ03_21495	COG3240	lipase activity
LTQ03_21500	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LTQ03_21515	COG4771	TonB-dependent receptor
LTQ03_21535	COG0840	transmembrane signaling receptor activity
LTQ03_21545	COG0573	inorganic phosphate transmembrane transporter activity
LTQ03_21550	COG0581	inorganic phosphate transmembrane transporter activity
LTQ03_21555	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LTQ03_21570	COG2304	oxidoreductase activity
LTQ03_21575	COG2304	oxidoreductase activity
LTQ03_21590	COG0714	Associated with various cellular activities
LTQ03_21595	COG0840	transmembrane signaling receptor activity
LTQ03_21610	COG3842	ATPase activity
LTQ03_21620	COG1175	transmembrane transport
LTQ03_21625	COG3833	ABC-type maltose transport systems, permease component
LTQ03_21680	COG0668	transmembrane transport
LTQ03_21685	COG0583	DNA-binding transcription factor activity
LTQ03_21705	COG2239	Acts as a magnesium transporter
LTQ03_21715	COG0387	Pfam Sodium calcium exchanger
LTQ03_21720	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_21725	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LTQ03_21730	COG2356	endonuclease I
LTQ03_21740	COG0577	efflux transmembrane transporter activity
LTQ03_21745	COG1136	(ABC) transporter
LTQ03_21755	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LTQ03_21765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ03_21780	COG1032	radical SAM domain protein
LTQ03_21810	COG1028	Short-chain dehydrogenase reductase Sdr
LTQ03_21830	COG0673	inositol 2-dehydrogenase activity
LTQ03_21835	COG1737	Transcriptional regulator
LTQ03_21840	COG1172	Belongs to the binding-protein-dependent transport system permease family
LTQ03_21845	COG1129	ABC transporter
LTQ03_21855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LTQ03_21870	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LTQ03_21875	COG0183	Belongs to the thiolase family
LTQ03_21890	COG0534	Mate efflux family protein
LTQ03_21895	COG3385	transposase activity
LTQ03_21905	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LTQ03_21910	COG2999	glutathione oxidoreductase activity
LTQ03_21920	COG0673	inositol 2-dehydrogenase activity
LTQ03_21940	COG0584	glycerophosphoryl diester phosphodiesterase
LTQ03_21945	COG3842	ATPase activity
LTQ03_21950	COG0395	ABC-type sugar transport system, permease component
LTQ03_21955	COG1175	transmembrane transport
LTQ03_21975	COG0189	ligase activity
LTQ03_21975	COG4067	protein conserved in archaea
LTQ03_21980	COG0189	ligase activity
LTQ03_21985	COG4533	DNA binding
LTQ03_22015	COG1012	belongs to the aldehyde dehydrogenase family
LTQ03_22020	COG1414	Transcriptional regulator
LTQ03_22025	COG0280	phosphate acetyltransferase
LTQ03_22030	COG0730	response to heat
LTQ03_22060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LTQ03_22065	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LTQ03_22070	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_22075	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
LTQ03_22075	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
LTQ03_22090	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ03_22100	COG2354	Protein conserved in bacteria
LTQ03_22105	COG0418	dihydroorotase activity
LTQ03_22115	COG3217	Mosc domain protein beta barrel domain protein
LTQ03_22115	COG0633	Ferredoxin
LTQ03_22120	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LTQ03_22165	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LTQ03_22170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ03_22180	COG0848	biopolymer transport protein
LTQ03_22185	COG0811	peptide transport
LTQ03_22190	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LTQ03_22200	COG3721	Heme iron utilization protein
LTQ03_22205	COG0748	coenzyme F420 binding
LTQ03_22210	COG2096	Adenosyltransferase
LTQ03_22215	COG0784	Response regulator, receiver
LTQ03_22215	COG0835	chemotaxis
LTQ03_22220	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LTQ03_22225	COG0366	Alpha amylase catalytic
LTQ03_22235	COG3314	Sporulation integral membrane protein YlbJ
LTQ03_22260	COG0739	heme binding
LTQ03_22265	COG5001	Diguanylate cyclase
LTQ03_22270	COG0583	DNA-binding transcription factor activity
LTQ03_22275	COG2814	Major facilitator Superfamily
LTQ03_22290	COG0697	spore germination
LTQ03_22310	COG3118	belongs to the thioredoxin family
LTQ03_22315	COG4232	protein-disulfide reductase activity
LTQ03_22330	COG0668	transmembrane transport
LTQ03_22340	COG2197	response regulator
LTQ03_22375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_22380	COG1538	Outer membrane efflux protein
LTQ03_22400	COG4989	oxidoreductase activity
LTQ03_22410	COG0513	Belongs to the DEAD box helicase family
LTQ03_22425	COG2176	DNA-directed DNA polymerase activity
LTQ03_22435	COG0513	Belongs to the DEAD box helicase family
LTQ03_22440	COG0778	Nitroreductase
LTQ03_22445	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
LTQ03_22450	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LTQ03_22455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LTQ03_22460	COG0667	Aldo Keto reductase
LTQ03_22470	COG2195	Cleaves the N-terminal amino acid of tripeptides
LTQ03_22505	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LTQ03_22520	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
LTQ03_22525	COG0513	Belongs to the DEAD box helicase family
LTQ03_22530	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LTQ03_22545	COG1396	sequence-specific DNA binding
LTQ03_22550	COG3135	benzoate transporter
LTQ03_22595	COG1280	lysine exporter protein (LysE YggA)
LTQ03_22625	COG0366	Alpha amylase catalytic
LTQ03_22635	COG0583	DNA-binding transcription factor activity
LTQ03_22640	COG0534	Mate efflux family protein
LTQ03_22670	COG0516	GMP reductase activity
LTQ03_22675	COG0582	viral genome integration into host DNA
LTQ03_22735	COG0697	spore germination
LTQ03_22740	COG0351	phosphomethylpyrimidine kinase
LTQ03_22745	COG1116	anion transmembrane transporter activity
LTQ03_22750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LTQ03_22755	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LTQ03_22760	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LTQ03_22765	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LTQ03_22785	COG0583	DNA-binding transcription factor activity
LTQ03_22800	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LTQ03_22825	COG3706	GGDEF domain
LTQ03_22835	COG1566	PFAM secretion protein HlyD family protein
LTQ03_22845	COG0628	permease
LTQ03_22875	COG4607	ABC-type enterochelin transport system periplasmic component
LTQ03_22880	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LTQ03_22885	COG4605	iron ion homeostasis
LTQ03_22890	COG4604	ABC transporter, ATP-binding protein
LTQ03_22895	COG3437	response regulator, receiver
LTQ03_22900	COG4999	Histidine kinase
LTQ03_22900	COG3850	Histidine kinase
LTQ03_22900	COG3437	response regulator, receiver
LTQ03_22900	COG2205	protein histidine kinase activity
LTQ03_22905	COG0583	DNA-binding transcription factor activity
LTQ03_22910	COG2814	Major facilitator Superfamily
LTQ03_22930	COG1522	sequence-specific DNA binding
LTQ03_22935	COG0840	transmembrane signaling receptor activity
LTQ03_22940	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LTQ03_22945	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LTQ03_22960	COG2203	Gaf domain
LTQ03_22960	COG3706	GGDEF domain
LTQ03_22960	COG4251	negative regulation of phosphorylation
LTQ03_22960	COG5001	Diguanylate cyclase
LTQ03_22965	COG2897	thiosulfate sulfurtransferase activity
LTQ03_22995	COG0302	gtp cyclohydrolase
LTQ03_23005	COG4681	YaeQ
LTQ03_23010	COG1278	Cold shock
LTQ03_23015	COG2133	pyrroloquinoline quinone binding
LTQ03_23025	COG1120	ATPase activity
LTQ03_23055	COG1024	Enoyl-CoA hydratase
LTQ03_23075	COG2985	domain, Protein
LTQ03_23085	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_23090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_23105	COG3710	Transcriptional regulator
LTQ03_23115	COG1902	pentaerythritol trinitrate reductase activity
LTQ03_23115	COG0446	pyridine nucleotide-disulphide oxidoreductase
LTQ03_23130	COG1132	(ABC) transporter
LTQ03_23155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_23160	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_23175	COG2273	Hydrolase Family 16
LTQ03_23175	COG5297	Belongs to the glycosyl hydrolase family 6
LTQ03_23195	COG2824	Alkylphosphonate utilization operon protein PhnA
LTQ03_23240	COG0765	amino acid transport
LTQ03_23245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LTQ03_23250	COG0765	amino acid transport
LTQ03_23255	COG1126	abc transporter atp-binding protein
LTQ03_23260	COG1979	alcohol dehydrogenase
LTQ03_23265	COG2207	Transcriptional regulator
LTQ03_23310	COG3059	membrane
LTQ03_23315	COG0384	phenazine biosynthesis protein PhzF
LTQ03_23325	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LTQ03_23340	COG3706	GGDEF domain
LTQ03_23355	COG1686	Belongs to the peptidase S11 family
LTQ03_23365	COG0564	pseudouridine synthase activity
LTQ03_23375	COG2130	NADP-dependent
LTQ03_23380	COG1309	transcriptional regulator
LTQ03_23385	COG0545	Peptidyl-prolyl cis-trans isomerase
LTQ03_23405	COG3604	Transcriptional regulator
LTQ03_23410	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LTQ03_23410	COG1017	nitric oxide dioxygenase activity
LTQ03_23420	COG0038	chloride channel
LTQ03_23425	COG0523	cobalamin synthesis protein
LTQ03_23430	COG0513	Belongs to the DEAD box helicase family
LTQ03_23435	COG1280	lysine exporter protein (LysE YggA)
LTQ03_23460	COG0745	RESPONSE REGULATOR receiver
LTQ03_23505	COG3005	denitrification pathway
LTQ03_23515	COG0243	molybdopterin cofactor binding
LTQ03_23525	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ03_23525	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LTQ03_23530	COG3850	Histidine kinase
LTQ03_23535	COG2197	response regulator
LTQ03_23540	COG3069	C4-dicarboxylate transmembrane transporter activity
LTQ03_23555	COG2267	carboxylic ester hydrolase activity
LTQ03_23560	COG2067	long-chain fatty acid transport protein
LTQ03_23565	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LTQ03_23570	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LTQ03_23590	COG2188	Transcriptional regulator
LTQ03_23595	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_23595	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LTQ03_23595	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LTQ03_23600	COG0383	alpha-mannosidase activity
LTQ03_23605	COG1929	Belongs to the glycerate kinase type-1 family
LTQ03_23630	COG3706	GGDEF domain
LTQ03_23635	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LTQ03_23680	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LTQ03_23685	COG0494	nUDIX hydrolase
LTQ03_23695	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LTQ03_23720	COG0840	transmembrane signaling receptor activity
LTQ03_23755	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LTQ03_23765	COG2116	formate transmembrane transporter activity
LTQ03_23770	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LTQ03_23770	COG1648	precorrin-2 dehydrogenase activity
LTQ03_23785	COG0745	RESPONSE REGULATOR receiver
LTQ03_23790	COG2205	protein histidine kinase activity
LTQ03_23795	COG1301	dicarboxylic acid transport
LTQ03_23800	COG4774	siderophore transport
LTQ03_23810	COG0811	peptide transport
LTQ03_23815	COG0811	peptide transport
LTQ03_23820	COG0848	biopolymer transport protein
LTQ03_23865	COG0803	Belongs to the bacterial solute-binding protein 9 family
LTQ03_23870	COG1121	(ABC) transporter
LTQ03_23875	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LTQ03_23875	COG1321	iron dependent repressor
LTQ03_23900	COG0534	Mate efflux family protein
LTQ03_23930	COG0318	PFAM AMP-dependent synthetase and ligase
LTQ03_23940	COG3118	belongs to the thioredoxin family
LTQ03_23945	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LTQ03_23975	COG1328	CTP reductase activity
LTQ03_23980	COG0602	queuosine metabolic process
LTQ03_24000	COG0189	ligase activity
LTQ03_24000	COG4067	protein conserved in archaea
LTQ03_24005	COG0488	(ABC) transporter