locus-tag class description LTQ54_00015 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_00015 PF17785 PUA-like domain LTQ54_00020 PF12729 Four helix bundle sensory module for signal transduction LTQ54_00020 PF00672 HAMP domain LTQ54_00020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_00025 PF00708 Acylphosphatase LTQ54_00030 PF04358 DsrC like protein LTQ54_00035 PF01027 Inhibitor of apoptosis-promoting Bax1 LTQ54_00040 PF00005 ABC transporter LTQ54_00045 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00050 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00055 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_00060 PF10414 Sirohaem synthase dimerisation region LTQ54_00060 PF14824 Sirohaem biosynthesis protein central LTQ54_00060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_00065 PF04461 Protein of unknown function (DUF520) LTQ54_00070 PF00793 DAHP synthetase I family LTQ54_00075 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_00075 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LTQ54_00075 PF00391 PEP-utilising enzyme, mobile domain LTQ54_00090 PF13509 S1 domain LTQ54_00090 PF17783 CvfB-like winged helix domain LTQ54_00095 PF01189 16S rRNA methyltransferase RsmB/F LTQ54_00095 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LTQ54_00095 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LTQ54_00100 PF02470 MlaD protein LTQ54_00105 PF04403 Paraquat-inducible protein A LTQ54_00110 PF00005 ABC transporter LTQ54_00110 PF00664 ABC transporter transmembrane region LTQ54_00115 PF13185 GAF domain LTQ54_00120 PF04352 ProQ/FINO family LTQ54_00120 PF17516 ProQ C-terminal domain LTQ54_00125 PF03572 Peptidase family S41 LTQ54_00125 PF17804 Tail specific protease N-terminal domain LTQ54_00125 PF11818 C-terminal domain of tail specific protease (DUF3340) LTQ54_00125 PF00595 PDZ domain LTQ54_00135 PF01433 Peptidase family M1 domain LTQ54_00135 PF11940 Domain of unknown function (DUF3458) Ig-like fold LTQ54_00135 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LTQ54_00145 PF05088 Bacterial NAD-glutamate dehydrogenase LTQ54_00150 PF01180 Dihydroorotate dehydrogenase LTQ54_00155 PF07126 Cell-division protein ZapC LTQ54_00160 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_00160 PF01170 Putative RNA methylase family UPF0020 LTQ54_00160 PF02926 THUMP domain LTQ54_00170 PF12848 ABC transporter LTQ54_00170 PF16326 ABC transporter C-terminal domain LTQ54_00170 PF00005 ABC transporter LTQ54_00180 PF04957 Ribosome modulation factor LTQ54_00185 PF07977 FabA-like domain LTQ54_00190 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_00190 PF13654 AAA domain LTQ54_00195 PF17414 MatP C-terminal ribbon-helix-helix domain LTQ54_00195 PF06303 MatP N-terminal domain LTQ54_00300 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_00300 PF09308 LuxQ, periplasmic LTQ54_00300 PF00072 Response regulator receiver domain LTQ54_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_00315 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_00330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LTQ54_00330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_00340 PF00403 Heavy-metal-associated domain LTQ54_00355 PF00027 Cyclic nucleotide-binding domain LTQ54_00355 PF13545 Crp-like helix-turn-helix domain LTQ54_00360 PF00582 Universal stress protein family LTQ54_00365 PF01171 PP-loop family LTQ54_00385 PF00005 ABC transporter LTQ54_00385 PF08402 TOBE domain LTQ54_00390 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00395 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00400 PF13416 Bacterial extracellular solute-binding protein LTQ54_00405 PF13416 Bacterial extracellular solute-binding protein LTQ54_00415 PF02146 Sir2 family LTQ54_00420 PF00909 Ammonium Transporter Family LTQ54_00435 PF13247 4Fe-4S dicluster domain LTQ54_00440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_00440 PF01568 Molydopterin dinucleotide binding domain LTQ54_00440 PF00384 Molybdopterin oxidoreductase LTQ54_00450 PF02613 Nitrate reductase delta subunit LTQ54_00470 PF02634 FdhD/NarQ family LTQ54_00475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_00475 PF00672 HAMP domain LTQ54_00480 PF12848 ABC transporter LTQ54_00480 PF00005 ABC transporter LTQ54_00495 PF08269 Cache domain LTQ54_00495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_00500 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_00505 PF00158 Sigma-54 interaction domain LTQ54_00505 PF00072 Response regulator receiver domain LTQ54_00505 PF02954 Bacterial regulatory protein, Fis family LTQ54_00510 PF12849 PBP superfamily domain LTQ54_00515 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00520 PF00005 ABC transporter LTQ54_00520 PF08402 TOBE domain LTQ54_00525 PF12804 MobA-like NTP transferase domain LTQ54_00530 PF03453 MoeA N-terminal region (domain I and II) LTQ54_00530 PF03454 MoeA C-terminal region (domain IV) LTQ54_00530 PF00994 Probable molybdopterin binding domain LTQ54_00540 PF00480 ROK family LTQ54_00545 PF03942 DTW domain LTQ54_00555 PF02743 Cache domain LTQ54_00555 PF00672 HAMP domain LTQ54_00555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_00560 PF00877 NlpC/P60 family LTQ54_00570 PF03881 Fructosamine kinase LTQ54_00580 PF00677 Lumazine binding domain LTQ54_00585 PF01554 MatE LTQ54_00590 PF01068 ATP dependent DNA ligase domain LTQ54_00590 PF14743 DNA ligase OB-like domain LTQ54_00600 PF00691 OmpA family LTQ54_00620 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00625 PF00571 CBS domain LTQ54_00625 PF00005 ABC transporter LTQ54_00635 PF00158 Sigma-54 interaction domain LTQ54_00635 PF00072 Response regulator receiver domain LTQ54_00635 PF02954 Bacterial regulatory protein, Fis family LTQ54_00640 PF00534 Glycosyl transferases group 1 LTQ54_00640 PF13439 Glycosyltransferase Family 4 LTQ54_00665 PF13439 Glycosyltransferase Family 4 LTQ54_00665 PF00534 Glycosyl transferases group 1 LTQ54_00675 PF02397 Bacterial sugar transferase LTQ54_00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_00680 PF03466 LysR substrate binding domain LTQ54_00690 PF00873 AcrB/AcrD/AcrF family LTQ54_00695 PF02321 Outer membrane efflux protein LTQ54_00705 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LTQ54_00780 PF08241 Methyltransferase domain LTQ54_00800 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_00845 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00850 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_00855 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_00860 PF00005 ABC transporter LTQ54_00865 PF00664 ABC transporter transmembrane region LTQ54_00865 PF00005 ABC transporter LTQ54_00875 PF01609 Transposase DDE domain LTQ54_00875 PF13006 Insertion element 4 transposase N-terminal LTQ54_00880 PF12392 Collagenase LTQ54_00880 PF01136 Peptidase family U32 LTQ54_00895 PF03616 Sodium/glutamate symporter LTQ54_00925 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_00940 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_00945 PF02810 SEC-C motif LTQ54_00945 PF07517 SecA DEAD-like domain LTQ54_00945 PF01043 SecA preprotein cross-linking domain LTQ54_00945 PF07516 SecA Wing and Scaffold domain LTQ54_00965 PF02016 LD-carboxypeptidase N-terminal domain LTQ54_00965 PF17676 LD-carboxypeptidase C-terminal domain LTQ54_00985 PF00583 Acetyltransferase (GNAT) family LTQ54_00995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_01045 PF00293 NUDIX domain LTQ54_01055 PF08264 Anticodon-binding domain of tRNA LTQ54_01055 PF09334 tRNA synthetases class I (M) LTQ54_01055 PF01588 Putative tRNA binding domain LTQ54_01070 PF03737 Aldolase/RraA LTQ54_01110 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_01110 PF12464 Maltose acetyltransferase LTQ54_01120 PF00849 RNA pseudouridylate synthase LTQ54_01120 PF01479 S4 domain LTQ54_01135 PF00293 NUDIX domain LTQ54_01155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_01155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_01165 PF03009 Glycerophosphoryl diester phosphodiesterase family LTQ54_01170 PF07690 Major Facilitator Superfamily LTQ54_01190 PF00582 Universal stress protein family LTQ54_01195 PF03441 FAD binding domain of DNA photolyase LTQ54_01195 PF00875 DNA photolyase LTQ54_01200 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LTQ54_01220 PF13476 AAA domain LTQ54_01225 PF00149 Calcineurin-like phosphoesterase LTQ54_01225 PF12320 Type 5 capsule protein repressor C-terminal domain LTQ54_01240 PF01810 LysE type translocator LTQ54_01245 PF00082 Subtilase family LTQ54_01250 PF00583 Acetyltransferase (GNAT) family LTQ54_01255 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_01260 PF13649 Methyltransferase domain LTQ54_01265 PF00593 TonB dependent receptor LTQ54_01265 PF07715 TonB-dependent Receptor Plug Domain LTQ54_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01270 PF03466 LysR substrate binding domain LTQ54_01275 PF00704 Glycosyl hydrolases family 18 LTQ54_01305 PF00535 Glycosyl transferase family 2 LTQ54_01315 PF12729 Four helix bundle sensory module for signal transduction LTQ54_01315 PF00672 HAMP domain LTQ54_01315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_01325 PF01545 Cation efflux family LTQ54_01330 PF00144 Beta-lactamase LTQ54_01340 PF00144 Beta-lactamase LTQ54_01350 PF12833 Helix-turn-helix domain LTQ54_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01355 PF03466 LysR substrate binding domain LTQ54_01360 PF00709 Adenylosuccinate synthetase LTQ54_01365 PF08448 PAS fold LTQ54_01365 PF00563 EAL domain LTQ54_01365 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_01370 PF04972 BON domain LTQ54_01370 PF00691 OmpA family LTQ54_01405 PF00437 Type II/IV secretion system protein LTQ54_01410 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_01420 PF00263 Bacterial type II and III secretion system protein LTQ54_01420 PF04972 BON domain LTQ54_01420 PF13629 Pilus formation protein N terminal region LTQ54_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01440 PF03466 LysR substrate binding domain LTQ54_01445 PF01638 HxlR-like helix-turn-helix LTQ54_01470 PF00072 Response regulator receiver domain LTQ54_01470 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_01475 PF07687 Peptidase dimerisation domain LTQ54_01475 PF01546 Peptidase family M20/M25/M40 LTQ54_01490 PF04204 Homoserine O-succinyltransferase LTQ54_01500 PF05971 RNA methyltransferase LTQ54_01505 PF01863 Protein of unknown function DUF45 LTQ54_01515 PF03466 LysR substrate binding domain LTQ54_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01520 PF07690 Major Facilitator Superfamily LTQ54_01530 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_01540 PF00583 Acetyltransferase (GNAT) family LTQ54_01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01565 PF03466 LysR substrate binding domain LTQ54_01585 PF02322 Cytochrome bd terminal oxidase subunit II LTQ54_01590 PF01654 Cytochrome bd terminal oxidase subunit I LTQ54_01595 PF00155 Aminotransferase class I and II LTQ54_01595 PF00392 Bacterial regulatory proteins, gntR family LTQ54_01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01610 PF03466 LysR substrate binding domain LTQ54_01615 PF00107 Zinc-binding dehydrogenase LTQ54_01615 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_01625 PF00005 ABC transporter LTQ54_01630 PF01032 FecCD transport family LTQ54_01635 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LTQ54_01650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LTQ54_01655 PF02654 Cobalamin-5-phosphate synthase LTQ54_01660 PF02277 Phosphoribosyltransferase LTQ54_01665 PF01613 Flavin reductase like domain LTQ54_01675 PF13460 NAD(P)H-binding LTQ54_01680 PF00375 Sodium:dicarboxylate symporter family LTQ54_01685 PF03928 Haem-degrading LTQ54_01690 PF00248 Aldo/keto reductase family LTQ54_01695 PF03466 LysR substrate binding domain LTQ54_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01705 PF03440 Aerolysin/Pertussis toxin (APT) domain LTQ54_01705 PF01117 Aerolysin toxin LTQ54_01720 PF07969 Amidohydrolase family LTQ54_01735 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LTQ54_01740 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_01760 PF04116 Fatty acid hydroxylase superfamily LTQ54_01785 PF08411 Exonuclease C-terminal LTQ54_01785 PF00929 Exonuclease LTQ54_01790 PF03788 LrgA family LTQ54_01795 PF04172 LrgB-like family LTQ54_01800 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_01800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_01805 PF02222 ATP-grasp domain LTQ54_01810 PF05724 Thiopurine S-methyltransferase (TPMT) LTQ54_01820 PF00034 Cytochrome c LTQ54_01855 PF00216 Bacterial DNA-binding protein LTQ54_01865 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_01870 PF07683 Cobalamin synthesis protein cobW C-terminal domain LTQ54_01870 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_01880 PF00392 Bacterial regulatory proteins, gntR family LTQ54_01880 PF00155 Aminotransferase class I and II LTQ54_01885 PF00155 Aminotransferase class I and II LTQ54_01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_01890 PF00072 Response regulator receiver domain LTQ54_01895 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LTQ54_01905 PF03466 LysR substrate binding domain LTQ54_01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_01910 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_01910 PF00082 Subtilase family LTQ54_01910 PF05922 Peptidase inhibitor I9 LTQ54_01920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_01920 PF17200 Single Cache domain 2 LTQ54_01920 PF00672 HAMP domain LTQ54_01950 PF00216 Bacterial DNA-binding protein LTQ54_01965 PF01048 Phosphorylase superfamily LTQ54_01970 PF04973 Nicotinamide mononucleotide transporter LTQ54_01990 PF02001 Protein of unknown function DUF134 LTQ54_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_02005 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_02005 PF07689 KaiB domain LTQ54_02010 PF00072 Response regulator receiver domain LTQ54_02010 PF00486 Transcriptional regulatory protein, C terminal LTQ54_02025 PF03824 High-affinity nickel-transport protein LTQ54_02040 PF12805 FUSC-like inner membrane protein yccS LTQ54_02045 PF01156 Inosine-uridine preferring nucleoside hydrolase LTQ54_02050 PF12833 Helix-turn-helix domain LTQ54_02055 PF02627 Carboxymuconolactone decarboxylase family LTQ54_02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_02075 PF03466 LysR substrate binding domain LTQ54_02085 PF00892 EamA-like transporter family LTQ54_02095 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_02100 PF01037 Lrp/AsnC ligand binding domain LTQ54_02110 PF01738 Dienelactone hydrolase family LTQ54_02115 PF03180 NLPA lipoprotein LTQ54_02130 PF04231 Endonuclease I LTQ54_02135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_02140 PF02152 Dihydroneopterin aldolase LTQ54_02145 PF01227 GTP cyclohydrolase I LTQ54_02160 PF01734 Patatin-like phospholipase LTQ54_02200 PF00561 alpha/beta hydrolase fold LTQ54_02215 PF03147 Ferredoxin-fold anticodon binding domain LTQ54_02215 PF03484 tRNA synthetase B5 domain LTQ54_02215 PF03483 B3/4 domain LTQ54_02215 PF01588 Putative tRNA binding domain LTQ54_02215 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LTQ54_02220 PF01409 tRNA synthetases class II core domain (F) LTQ54_02220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LTQ54_02225 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_02225 PF00072 Response regulator receiver domain LTQ54_02265 PF04408 Helicase associated domain (HA2) LTQ54_02265 PF00271 Helicase conserved C-terminal domain LTQ54_02265 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LTQ54_02265 PF11898 Domain of unknown function (DUF3418) LTQ54_02265 PF00270 DEAD/DEAH box helicase LTQ54_02295 PF00486 Transcriptional regulatory protein, C terminal LTQ54_02315 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_02325 PF00012 Hsp70 protein LTQ54_02330 PF00012 Hsp70 protein LTQ54_02345 PF13302 Acetyltransferase (GNAT) domain LTQ54_02350 PF18024 Helix-turn-helix domain LTQ54_02350 PF00158 Sigma-54 interaction domain LTQ54_02355 PF05128 Domain of unknown function (DUF697) LTQ54_02360 PF04317 YcjX-like family, DUF463 LTQ54_02375 PF04715 Anthranilate synthase component I, N terminal region LTQ54_02375 PF00425 chorismate binding enzyme LTQ54_02380 PF00072 Response regulator receiver domain LTQ54_02380 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_02380 PF09308 LuxQ, periplasmic LTQ54_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_02390 PF00293 NUDIX domain LTQ54_02395 PF03222 Tryptophan/tyrosine permease family LTQ54_02400 PF03315 Serine dehydratase beta chain LTQ54_02400 PF03313 Serine dehydratase alpha chain LTQ54_02405 PF03222 Tryptophan/tyrosine permease family LTQ54_02415 PF02634 FdhD/NarQ family LTQ54_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_02420 PF03466 LysR substrate binding domain LTQ54_02425 PF00384 Molybdopterin oxidoreductase LTQ54_02425 PF01568 Molydopterin dinucleotide binding domain LTQ54_02430 PF00672 HAMP domain LTQ54_02430 PF02743 Cache domain LTQ54_02430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_02435 PF01740 STAS domain LTQ54_02435 PF00916 Sulfate permease family LTQ54_02440 PF01336 OB-fold nucleic acid binding domain LTQ54_02440 PF00152 tRNA synthetases class II (D, K and N) LTQ54_02460 PF00392 Bacterial regulatory proteins, gntR family LTQ54_02460 PF00155 Aminotransferase class I and II LTQ54_02470 PF01966 HD domain LTQ54_02470 PF00672 HAMP domain LTQ54_02475 PF00155 Aminotransferase class I and II LTQ54_02490 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_02490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_02490 PF14579 Helix-hairpin-helix motif LTQ54_02490 PF02811 PHP domain LTQ54_02490 PF00929 Exonuclease LTQ54_02495 PF03475 3-alpha domain LTQ54_02495 PF03473 MOSC domain LTQ54_02505 PF12833 Helix-turn-helix domain LTQ54_02505 PF10114 Sensory domain found in PocR LTQ54_02510 PF07694 5TMR of 5TMR-LYT LTQ54_02510 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_02520 PF00266 Aminotransferase class-V LTQ54_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_02530 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_02530 PF00989 PAS fold LTQ54_02535 PF00158 Sigma-54 interaction domain LTQ54_02535 PF00072 Response regulator receiver domain LTQ54_02535 PF02954 Bacterial regulatory protein, Fis family LTQ54_02545 PF04994 TfoX C-terminal domain LTQ54_02545 PF04993 TfoX N-terminal domain LTQ54_02555 PF03956 Lysine exporter LysO LTQ54_02565 PF00282 Pyridoxal-dependent decarboxylase conserved domain LTQ54_02570 PF01418 Helix-turn-helix domain, rpiR family LTQ54_02570 PF01380 SIS domain LTQ54_02575 PF00465 Iron-containing alcohol dehydrogenase LTQ54_02580 PF00462 Glutaredoxin LTQ54_02585 PF06826 Predicted Permease Membrane Region LTQ54_02585 PF02080 TrkA-C domain LTQ54_02590 PF07055 Enoyl reductase FAD binding domain LTQ54_02590 PF12241 Trans-2-enoyl-CoA reductase catalytic region LTQ54_02590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LTQ54_02595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LTQ54_02595 PF09317 Domain of unknown function (DUF1974) LTQ54_02595 PF02770 Acyl-CoA dehydrogenase, middle domain LTQ54_02595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LTQ54_02600 PF16295 Tetracyclin repressor-like, C-terminal domain LTQ54_02600 PF00440 Bacterial regulatory proteins, tetR family LTQ54_02615 PF06965 Na+/H+ antiporter 1 LTQ54_02630 PF00005 ABC transporter LTQ54_02635 PF01554 MatE LTQ54_02640 PF11066 Protein of unknown function (DUF2867) LTQ54_02640 PF13460 NAD(P)H-binding LTQ54_02650 PF07690 Major Facilitator Superfamily LTQ54_02655 PF01479 S4 domain LTQ54_02655 PF00849 RNA pseudouridylate synthase LTQ54_02660 PF04851 Type III restriction enzyme, res subunit LTQ54_02660 PF00271 Helicase conserved C-terminal domain LTQ54_02670 PF00486 Transcriptional regulatory protein, C terminal LTQ54_02670 PF00072 Response regulator receiver domain LTQ54_02675 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_02675 PF00672 HAMP domain LTQ54_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_02685 PF05193 Peptidase M16 inactive domain LTQ54_02685 PF00675 Insulinase (Peptidase family M16) LTQ54_02690 PF00005 ABC transporter LTQ54_02690 PF06472 ABC transporter transmembrane region 2 LTQ54_02695 PF07715 TonB-dependent Receptor Plug Domain LTQ54_02705 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_02710 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_02715 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_02730 PF09335 SNARE associated Golgi protein LTQ54_02735 PF00535 Glycosyl transferase family 2 LTQ54_02735 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LTQ54_02740 PF01386 Ribosomal L25p family LTQ54_02765 PF13302 Acetyltransferase (GNAT) domain LTQ54_02810 PF02470 MlaD protein LTQ54_02815 PF04403 Paraquat-inducible protein A LTQ54_02820 PF08787 Alginate lyase LTQ54_02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_02825 PF03466 LysR substrate binding domain LTQ54_02835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LTQ54_02840 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_02845 PF00571 CBS domain LTQ54_02845 PF00005 ABC transporter LTQ54_02865 PF00246 Zinc carboxypeptidase LTQ54_02865 PF18027 Cytosolic carboxypeptidase N-terminal domain LTQ54_02875 PF01810 LysE type translocator LTQ54_02880 PF00270 DEAD/DEAH box helicase LTQ54_02880 PF00271 Helicase conserved C-terminal domain LTQ54_02890 PF01910 Thiamine-binding protein LTQ54_02910 PF13416 Bacterial extracellular solute-binding protein LTQ54_02915 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_02920 PF00005 ABC transporter LTQ54_02925 PF01066 CDP-alcohol phosphatidyltransferase LTQ54_02930 PF10672 S-adenosylmethionine-dependent methyltransferase LTQ54_02930 PF02926 THUMP domain LTQ54_02930 PF01170 Putative RNA methylase family UPF0020 LTQ54_02935 PF00849 RNA pseudouridylate synthase LTQ54_02940 PF00672 HAMP domain LTQ54_02940 PF12729 Four helix bundle sensory module for signal transduction LTQ54_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_02945 PF00209 Sodium:neurotransmitter symporter family LTQ54_02950 PF13091 PLD-like domain LTQ54_02950 PF13396 Phospholipase_D-nuclease N-terminal LTQ54_02955 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_02970 PF03352 Methyladenine glycosylase LTQ54_02975 PF00873 AcrB/AcrD/AcrF family LTQ54_02980 PF13533 Biotin-lipoyl like LTQ54_02985 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_02985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_02990 PF04024 PspC domain LTQ54_02995 PF06667 Phage shock protein B LTQ54_03000 PF04012 PspA/IM30 family LTQ54_03005 PF00158 Sigma-54 interaction domain LTQ54_03005 PF02954 Bacterial regulatory protein, Fis family LTQ54_03010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_03015 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_03025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_03025 PF00005 ABC transporter LTQ54_03030 PF00005 ABC transporter LTQ54_03045 PF01368 DHH family LTQ54_03045 PF02833 DHHA2 domain LTQ54_03055 PF00384 Molybdopterin oxidoreductase LTQ54_03055 PF18364 Molybdopterin oxidoreductase N-terminal domain LTQ54_03055 PF01568 Molydopterin dinucleotide binding domain LTQ54_03060 PF03264 NapC/NirT cytochrome c family, N-terminal region LTQ54_03065 PF06796 Periplasmic nitrate reductase protein NapE LTQ54_03070 PF03649 Uncharacterised protein family (UPF0014) LTQ54_03075 PF01226 Formate/nitrite transporter LTQ54_03100 PF00265 Thymidine kinase LTQ54_03105 PF09190 DALR domain LTQ54_03105 PF01406 tRNA synthetases class I (C) catalytic domain LTQ54_03110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_03115 PF00149 Calcineurin-like phosphoesterase LTQ54_03120 PF00563 EAL domain LTQ54_03120 PF08668 HDOD domain LTQ54_03125 PF02810 SEC-C motif LTQ54_03130 PF01502 Phosphoribosyl-AMP cyclohydrolase LTQ54_03130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LTQ54_03135 PF00977 Histidine biosynthesis protein LTQ54_03185 PF00580 UvrD/REP helicase N-terminal domain LTQ54_03185 PF13361 UvrD-like helicase C-terminal domain LTQ54_03185 PF12462 DNA helicase IV / RNA helicase N terminal LTQ54_03230 PF00012 Hsp70 protein LTQ54_03270 PF00977 Histidine biosynthesis protein LTQ54_03275 PF00117 Glutamine amidotransferase class-I LTQ54_03280 PF08645 Polynucleotide kinase 3 phosphatase LTQ54_03280 PF00475 Imidazoleglycerol-phosphate dehydratase LTQ54_03285 PF00155 Aminotransferase class I and II LTQ54_03290 PF00815 Histidinol dehydrogenase LTQ54_03295 PF08029 HisG, C-terminal domain LTQ54_03295 PF01634 ATP phosphoribosyltransferase LTQ54_03300 PF03553 Na+/H+ antiporter family LTQ54_03305 PF00816 H-NS histone family LTQ54_03310 PF00294 pfkB family carbohydrate kinase LTQ54_03325 PF04356 Protein of unknown function (DUF489) LTQ54_03330 PF00206 Lyase LTQ54_03330 PF08328 Adenylosuccinate lyase C-terminal LTQ54_03335 PF01435 Peptidase family M48 LTQ54_03350 PF08241 Methyltransferase domain LTQ54_03355 PF00155 Aminotransferase class I and II LTQ54_03360 PF06968 Biotin and Thiamin Synthesis associated domain LTQ54_03360 PF04055 Radical SAM superfamily LTQ54_03365 PF00202 Aminotransferase class-III LTQ54_03370 PF01258 Prokaryotic dksA/traR C4-type zinc finger LTQ54_03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_03375 PF02403 Seryl-tRNA synthetase N-terminal domain LTQ54_03380 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_03380 PF16193 AAA C-terminal domain LTQ54_03380 PF12002 MgsA AAA+ ATPase C terminal LTQ54_03385 PF03548 Outer membrane lipoprotein carrier protein LolA LTQ54_03390 PF17854 FtsK alpha domain LTQ54_03390 PF09397 Ftsk gamma domain LTQ54_03390 PF01580 FtsK/SpoIIIE family LTQ54_03390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LTQ54_03395 PF01037 Lrp/AsnC ligand binding domain LTQ54_03400 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LTQ54_03400 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LTQ54_03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03410 PF03466 LysR substrate binding domain LTQ54_03420 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LTQ54_03425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LTQ54_03430 PF18073 Rubredoxin metal binding domain LTQ54_03435 PF06305 Lipopolysaccharide assembly protein A domain LTQ54_03440 PF00216 Bacterial DNA-binding protein LTQ54_03445 PF00575 S1 RNA binding domain LTQ54_03450 PF02224 Cytidylate kinase LTQ54_03455 PF02348 Cytidylyltransferase LTQ54_03460 PF03966 Trm112p-like protein LTQ54_03470 PF00664 ABC transporter transmembrane region LTQ54_03470 PF00005 ABC transporter LTQ54_03475 PF00753 Metallo-beta-lactamase superfamily LTQ54_03475 PF03772 Competence protein LTQ54_03485 PF12704 MacB-like periplasmic core domain LTQ54_03485 PF02687 FtsX-like permease family LTQ54_03490 PF00005 ABC transporter LTQ54_03495 PF02687 FtsX-like permease family LTQ54_03495 PF12704 MacB-like periplasmic core domain LTQ54_03505 PF02559 CarD-like/TRCF domain LTQ54_03505 PF03461 TRCF domain LTQ54_03505 PF00271 Helicase conserved C-terminal domain LTQ54_03505 PF00270 DEAD/DEAH box helicase LTQ54_03505 PF17757 UvrB interaction domain LTQ54_03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_03525 PF05728 Uncharacterised protein family (UPF0227) LTQ54_03535 PF13036 Peptidoglycan-synthase activator LpoB LTQ54_03535 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LTQ54_03550 PF01230 HIT domain LTQ54_03555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_03555 PF00672 HAMP domain LTQ54_03565 PF01048 Phosphorylase superfamily LTQ54_03570 PF00403 Heavy-metal-associated domain LTQ54_03575 PF01554 MatE LTQ54_03580 PF01743 Poly A polymerase head domain LTQ54_03580 PF00571 CBS domain LTQ54_03595 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_03595 PF00591 Glycosyl transferase family, a/b domain LTQ54_03610 PF01323 DSBA-like thioredoxin domain LTQ54_03615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_03640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_03645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03650 PF03466 LysR substrate binding domain LTQ54_03655 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_03670 PF14863 Alkyl sulfatase dimerisation LTQ54_03670 PF14864 Alkyl sulfatase C-terminal LTQ54_03670 PF00753 Metallo-beta-lactamase superfamily LTQ54_03680 PF01040 UbiA prenyltransferase family LTQ54_03685 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LTQ54_03690 PF00510 Cytochrome c oxidase subunit III LTQ54_03695 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_03700 PF06481 COX Aromatic Rich Motif LTQ54_03700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LTQ54_03705 PF00873 AcrB/AcrD/AcrF family LTQ54_03715 PF00440 Bacterial regulatory proteins, tetR family LTQ54_03715 PF17932 Tetracyclin repressor-like, C-terminal domain LTQ54_03720 PF03466 LysR substrate binding domain LTQ54_03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03725 PF08803 Putative mono-oxygenase ydhR LTQ54_03735 PF08212 Lipocalin-like domain LTQ54_03740 PF12833 Helix-turn-helix domain LTQ54_03740 PF10114 Sensory domain found in PocR LTQ54_03750 PF01979 Amidohydrolase family LTQ54_03760 PF00005 ABC transporter LTQ54_03765 PF01497 Periplasmic binding protein LTQ54_03770 PF01032 FecCD transport family LTQ54_03780 PF00593 TonB dependent receptor LTQ54_03780 PF07715 TonB-dependent Receptor Plug Domain LTQ54_03790 PF09286 Pro-kumamolisin, activation domain LTQ54_03790 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_03805 PF13382 Adenine deaminase C-terminal domain LTQ54_03805 PF01979 Amidohydrolase family LTQ54_03815 PF00085 Thioredoxin LTQ54_03820 PF11412 Disulphide bond corrector protein DsbC LTQ54_03820 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_03830 PF01425 Amidase LTQ54_03840 PF12833 Helix-turn-helix domain LTQ54_03840 PF02311 AraC-like ligand binding domain LTQ54_03845 PF00892 EamA-like transporter family LTQ54_03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03855 PF03466 LysR substrate binding domain LTQ54_03880 PF02833 DHHA2 domain LTQ54_03880 PF01368 DHH family LTQ54_03885 PF05036 Sporulation related domain LTQ54_03885 PF03330 Lytic transglycolase LTQ54_03890 PF00860 Permease family LTQ54_03900 PF10417 C-terminal domain of 1-Cys peroxiredoxin LTQ54_03900 PF00578 AhpC/TSA family LTQ54_03905 PF13192 Thioredoxin domain LTQ54_03905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_03910 PF01810 LysE type translocator LTQ54_03915 PF01037 Lrp/AsnC ligand binding domain LTQ54_03920 PF03313 Serine dehydratase alpha chain LTQ54_03920 PF03315 Serine dehydratase beta chain LTQ54_03925 PF00474 Sodium:solute symporter family LTQ54_03930 PF07690 Major Facilitator Superfamily LTQ54_03945 PF00356 Bacterial regulatory proteins, lacI family LTQ54_03950 PF00884 Sulfatase LTQ54_03975 PF03466 LysR substrate binding domain LTQ54_03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03980 PF02056 Family 4 glycosyl hydrolase LTQ54_03980 PF11975 Family 4 glycosyl hydrolase C-terminal domain LTQ54_03985 PF04794 YdjC-like protein LTQ54_03990 PF00376 MerR family regulatory protein LTQ54_03990 PF09278 MerR, DNA binding LTQ54_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_03995 PF03466 LysR substrate binding domain LTQ54_04010 PF01645 Conserved region in glutamate synthase LTQ54_04020 PF00158 Sigma-54 interaction domain LTQ54_04020 PF00072 Response regulator receiver domain LTQ54_04020 PF02954 Bacterial regulatory protein, Fis family LTQ54_04035 PF03109 ABC1 family LTQ54_04040 PF00255 Glutathione peroxidase LTQ54_04075 PF00535 Glycosyl transferase family 2 LTQ54_04080 PF00534 Glycosyl transferases group 1 LTQ54_04080 PF13439 Glycosyltransferase Family 4 LTQ54_04085 PF01693 Caulimovirus viroplasmin LTQ54_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_04115 PF03466 LysR substrate binding domain LTQ54_04125 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_04140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_04145 PF09619 Type III secretion system lipoprotein chaperone (YscW) LTQ54_04160 PF13404 AsnC-type helix-turn-helix domain LTQ54_04160 PF01037 Lrp/AsnC ligand binding domain LTQ54_04165 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_04175 PF00873 AcrB/AcrD/AcrF family LTQ54_04180 PF13533 Biotin-lipoyl like LTQ54_04230 PF01048 Phosphorylase superfamily LTQ54_04245 PF07690 Major Facilitator Superfamily LTQ54_04250 PF03601 Conserved hypothetical protein 698 LTQ54_04260 PF13193 AMP-binding enzyme C-terminal domain LTQ54_04260 PF00501 AMP-binding enzyme LTQ54_04265 PF13378 Enolase C-terminal domain-like LTQ54_04270 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_04275 PF00561 alpha/beta hydrolase fold LTQ54_04280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_04280 PF16582 Middle domain of thiamine pyrophosphate LTQ54_04280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_04285 PF00425 chorismate binding enzyme LTQ54_04290 PF00155 Aminotransferase class I and II LTQ54_04300 PF01966 HD domain LTQ54_04300 PF13286 Phosphohydrolase-associated domain LTQ54_04320 PF13145 PPIC-type PPIASE domain LTQ54_04325 PF00216 Bacterial DNA-binding protein LTQ54_04330 PF02190 ATP-dependent protease La (LON) substrate-binding domain LTQ54_04330 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_04330 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_04335 PF06689 ClpX C4-type zinc finger LTQ54_04335 PF07724 AAA domain (Cdc48 subfamily) LTQ54_04335 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_04340 PF00574 Clp protease LTQ54_04345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_04345 PF05698 Bacterial trigger factor protein (TF) C-terminus LTQ54_04345 PF05697 Bacterial trigger factor protein (TF) LTQ54_04350 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_04350 PF02743 Cache domain LTQ54_04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_04355 PF02954 Bacterial regulatory protein, Fis family LTQ54_04355 PF00158 Sigma-54 interaction domain LTQ54_04355 PF00072 Response regulator receiver domain LTQ54_04365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_04370 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_04375 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_04385 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_04390 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_04390 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_04390 PF08659 KR domain LTQ54_04390 PF00550 Phosphopantetheine attachment site LTQ54_04390 PF14765 Polyketide synthase dehydratase LTQ54_04390 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_04390 PF00698 Acyl transferase domain LTQ54_04400 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_04400 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_04400 PF14765 Polyketide synthase dehydratase LTQ54_04400 PF00550 Phosphopantetheine attachment site LTQ54_04400 PF00698 Acyl transferase domain LTQ54_04400 PF08659 KR domain LTQ54_04400 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_04405 PF00698 Acyl transferase domain LTQ54_04405 PF03060 Nitronate monooxygenase LTQ54_04410 PF16360 GTP-binding GTPase Middle Region LTQ54_04410 PF13167 GTP-binding GTPase N-terminal LTQ54_04410 PF01926 50S ribosome-binding GTPase LTQ54_04415 PF00005 ABC transporter LTQ54_04415 PF17912 MalK OB fold domain LTQ54_04415 PF03459 TOBE domain LTQ54_04420 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_04425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_04430 PF01547 Bacterial extracellular solute-binding protein LTQ54_04435 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_04435 PF00672 HAMP domain LTQ54_04440 PF00072 Response regulator receiver domain LTQ54_04440 PF00486 Transcriptional regulatory protein, C terminal LTQ54_04445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LTQ54_04450 PF01810 LysE type translocator LTQ54_04455 PF05175 Methyltransferase small domain LTQ54_04460 PF01713 Smr domain LTQ54_04465 PF00300 Histidine phosphatase superfamily (branch 1) LTQ54_04470 PF00675 Insulinase (Peptidase family M16) LTQ54_04470 PF05193 Peptidase M16 inactive domain LTQ54_04470 PF16187 Middle or third domain of peptidase_M16 LTQ54_04475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LTQ54_04475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LTQ54_04475 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_04480 PF00108 Thiolase, N-terminal domain LTQ54_04480 PF02803 Thiolase, C-terminal domain LTQ54_04485 PF04542 Sigma-70 region 2 LTQ54_04485 PF08281 Sigma-70, region 4 LTQ54_04495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_04500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_04505 PF04333 MlaA lipoprotein LTQ54_04510 PF03918 Cytochrome C biogenesis protein LTQ54_04515 PF03918 Cytochrome C biogenesis protein LTQ54_04520 PF08534 Redoxin LTQ54_04525 PF01578 Cytochrome C assembly protein LTQ54_04525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LTQ54_04530 PF03100 CcmE LTQ54_04535 PF04995 Heme exporter protein D (CcmD) LTQ54_04540 PF01578 Cytochrome C assembly protein LTQ54_04545 PF03379 CcmB protein LTQ54_04550 PF00005 ABC transporter LTQ54_04560 PF01584 CheW-like domain LTQ54_04570 PF13614 AAA domain LTQ54_04575 PF01339 CheB methylesterase LTQ54_04575 PF00072 Response regulator receiver domain LTQ54_04580 PF01584 CheW-like domain LTQ54_04580 PF02895 Signal transducing histidine kinase, homodimeric domain LTQ54_04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_04580 PF01627 Hpt domain LTQ54_04580 PF00072 Response regulator receiver domain LTQ54_04585 PF04344 Chemotaxis phosphatase, CheZ LTQ54_04590 PF00072 Response regulator receiver domain LTQ54_04595 PF04542 Sigma-70 region 2 LTQ54_04595 PF04539 Sigma-70 region 3 LTQ54_04595 PF04545 Sigma-70, region 4 LTQ54_04600 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_04605 PF00448 SRP54-type protein, GTPase domain LTQ54_04610 PF00771 FHIPEP family LTQ54_04615 PF01312 FlhB HrpN YscU SpaS Family LTQ54_04620 PF01311 Bacterial export proteins, family 1 LTQ54_04625 PF01313 Bacterial export proteins, family 3 LTQ54_04630 PF00813 FliP family LTQ54_04635 PF04347 Flagellar biosynthesis protein, FliO LTQ54_04640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LTQ54_04645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LTQ54_04645 PF02154 Flagellar motor switch protein FliM LTQ54_04665 PF18269 T3SS EscN ATPase C-terminal domain LTQ54_04665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_04675 PF14842 FliG N-terminal domain LTQ54_04675 PF14841 FliG middle domain LTQ54_04675 PF01706 FliG C-terminal domain LTQ54_04680 PF08345 Flagellar M-ring protein C-terminal LTQ54_04680 PF01514 Secretory protein of YscJ/FliF family LTQ54_04685 PF02049 Flagellar hook-basal body complex protein FliE LTQ54_04690 PF00072 Response regulator receiver domain LTQ54_04690 PF00158 Sigma-54 interaction domain LTQ54_04690 PF02954 Bacterial regulatory protein, Fis family LTQ54_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_04695 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_04695 PF13188 PAS domain LTQ54_04700 PF00158 Sigma-54 interaction domain LTQ54_04700 PF06490 Flagellar regulatory protein FleQ LTQ54_04700 PF02954 Bacterial regulatory protein, Fis family LTQ54_04705 PF02561 Flagellar protein FliS LTQ54_04715 PF02465 Flagellar hook-associated protein 2 N-terminus LTQ54_04715 PF07195 Flagellar hook-associated protein 2 C-terminus LTQ54_04715 PF07196 Flagellin hook IN motif LTQ54_04720 PF03646 FlaG protein LTQ54_04725 PF00669 Bacterial flagellin N-terminal helical region LTQ54_04725 PF07196 Flagellin hook IN motif LTQ54_04725 PF00700 Bacterial flagellin C-terminal helical region LTQ54_04730 PF00669 Bacterial flagellin N-terminal helical region LTQ54_04730 PF07196 Flagellin hook IN motif LTQ54_04730 PF00700 Bacterial flagellin C-terminal helical region LTQ54_04735 PF00669 Bacterial flagellin N-terminal helical region LTQ54_04735 PF00700 Bacterial flagellin C-terminal helical region LTQ54_04735 PF07196 Flagellin hook IN motif LTQ54_04745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_04745 PF07196 Flagellin hook IN motif LTQ54_04750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LTQ54_04750 PF10135 Rod binding protein LTQ54_04755 PF02119 Flagellar P-ring protein LTQ54_04760 PF02107 Flagellar L-ring protein LTQ54_04765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_04765 PF00460 Flagella basal body rod protein LTQ54_04770 PF00460 Flagella basal body rod protein LTQ54_04770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_04775 PF07559 Flagellar basal body protein FlaE LTQ54_04775 PF00460 Flagella basal body rod protein LTQ54_04775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_04780 PF03963 Flagellar hook capping protein - N-terminal region LTQ54_04780 PF13860 FlgD Ig-like domain LTQ54_04780 PF13861 FlgD Tudor-like domain LTQ54_04785 PF00460 Flagella basal body rod protein LTQ54_04785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LTQ54_04790 PF00460 Flagella basal body rod protein LTQ54_04795 PF01739 CheR methyltransferase, SAM binding domain LTQ54_04795 PF03705 CheR methyltransferase, all-alpha domain LTQ54_04800 PF01584 CheW-like domain LTQ54_04800 PF00072 Response regulator receiver domain LTQ54_04805 PF13144 Chaperone for flagella basal body P-ring formation LTQ54_04840 PF04820 Tryptophan halogenase LTQ54_04865 PF00550 Phosphopantetheine attachment site LTQ54_04870 PF00550 Phosphopantetheine attachment site LTQ54_04880 PF00501 AMP-binding enzyme LTQ54_04880 PF13193 AMP-binding enzyme C-terminal domain LTQ54_04890 PF00535 Glycosyl transferase family 2 LTQ54_04895 PF00221 Aromatic amino acid lyase LTQ54_04920 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_04920 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_04935 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_04935 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_04940 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_04945 PF00403 Heavy-metal-associated domain LTQ54_04960 PF03173 Putative carbohydrate binding domain LTQ54_04960 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LTQ54_04960 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_04960 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_04985 PF01713 Smr domain LTQ54_04990 PF00849 RNA pseudouridylate synthase LTQ54_04990 PF01479 S4 domain LTQ54_04995 PF04073 Aminoacyl-tRNA editing domain LTQ54_05000 PF02872 5'-nucleotidase, C-terminal domain LTQ54_05000 PF00149 Calcineurin-like phosphoesterase LTQ54_05005 PF00793 DAHP synthetase I family LTQ54_05010 PF13369 Transglutaminase-like superfamily LTQ54_05015 PF04247 Invasion gene expression up-regulator, SirB LTQ54_05020 PF13847 Methyltransferase domain LTQ54_05020 PF17827 PrmC N-terminal domain LTQ54_05025 PF03462 PCRF domain LTQ54_05025 PF00472 RF-1 domain LTQ54_05030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LTQ54_05030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LTQ54_05030 PF01488 Shikimate / quinate 5-dehydrogenase LTQ54_05035 PF03550 Outer membrane lipoprotein LolB LTQ54_05040 PF08544 GHMP kinases C terminal LTQ54_05040 PF00288 GHMP kinases N terminal domain LTQ54_05045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LTQ54_05045 PF14572 Phosphoribosyl synthetase-associated domain LTQ54_05050 PF01195 Peptidyl-tRNA hydrolase LTQ54_05055 PF01926 50S ribosome-binding GTPase LTQ54_05055 PF06071 Protein of unknown function (DUF933) LTQ54_05155 PF10282 Lactonase, 7-bladed beta-propeller LTQ54_05160 PF01494 FAD binding domain LTQ54_05165 PF00919 Uncharacterized protein family UPF0004 LTQ54_05165 PF01938 TRAM domain LTQ54_05165 PF04055 Radical SAM superfamily LTQ54_05170 PF02562 PhoH-like protein LTQ54_05175 PF02130 Uncharacterized protein family UPF0054 LTQ54_05180 PF00571 CBS domain LTQ54_05180 PF03471 Transporter associated domain LTQ54_05185 PF00795 Carbon-nitrogen hydrolase LTQ54_05190 PF07295 Zinc-ribbon containing domain LTQ54_05195 PF08264 Anticodon-binding domain of tRNA LTQ54_05195 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_05195 PF13603 Leucyl-tRNA synthetase, Domain 2 LTQ54_05200 PF04390 Lipopolysaccharide-assembly LTQ54_05205 PF06144 DNA polymerase III, delta subunit LTQ54_05205 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LTQ54_05215 PF02590 Predicted SPOUT methyltransferase LTQ54_05220 PF00905 Penicillin binding protein transpeptidase domain LTQ54_05220 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_05225 PF01098 Cell cycle protein LTQ54_05230 PF05036 Sporulation related domain LTQ54_05230 PF03330 Lytic transglycolase LTQ54_05235 PF07943 Penicillin-binding protein 5, C-terminal domain LTQ54_05235 PF00768 D-alanyl-D-alanine carboxypeptidase LTQ54_05240 PF04359 Protein of unknown function (DUF493) LTQ54_05245 PF03099 Biotin/lipoate A/B protein ligase family LTQ54_05250 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LTQ54_05250 PF04055 Radical SAM superfamily LTQ54_05255 PF00209 Sodium:neurotransmitter symporter family LTQ54_05270 PF09382 RQC domain LTQ54_05270 PF00270 DEAD/DEAH box helicase LTQ54_05270 PF00271 Helicase conserved C-terminal domain LTQ54_05270 PF00570 HRDC domain LTQ54_05270 PF16124 RecQ zinc-binding LTQ54_05275 PF11798 IMS family HHH motif LTQ54_05275 PF00817 impB/mucB/samB family LTQ54_05275 PF11799 impB/mucB/samB family C-terminal domain LTQ54_05280 PF00072 Response regulator receiver domain LTQ54_05280 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_05285 PF04400 (Na+)-NQR maturation NqrM LTQ54_05290 PF02424 ApbE family LTQ54_05295 PF00970 Oxidoreductase FAD-binding domain LTQ54_05295 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_05295 PF00175 Oxidoreductase NAD-binding domain LTQ54_05300 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_05305 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_05310 PF04205 FMN-binding domain LTQ54_05315 PF03116 NQR2, RnfD, RnfE family LTQ54_05320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LTQ54_05320 PF11973 NQRA C-terminal domain LTQ54_05325 PF01722 BolA-like protein LTQ54_05330 PF05175 Methyltransferase small domain LTQ54_05340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LTQ54_05345 PF07690 Major Facilitator Superfamily LTQ54_05355 PF03502 Nucleoside-specific channel-forming protein, Tsx LTQ54_05360 PF08546 Ketopantoate reductase PanE/ApbA C terminal LTQ54_05360 PF02558 Ketopantoate reductase PanE/ApbA LTQ54_05365 PF00266 Aminotransferase class-V LTQ54_05370 PF02657 Fe-S metabolism associated domain LTQ54_05375 PF00899 ThiF family LTQ54_05380 PF06725 3D domain LTQ54_05380 PF03562 MltA specific insert domain LTQ54_05390 PF00696 Amino acid kinase family LTQ54_05390 PF00583 Acetyltransferase (GNAT) family LTQ54_05400 PF13538 UvrD-like helicase C-terminal domain LTQ54_05405 PF13361 UvrD-like helicase C-terminal domain LTQ54_05405 PF12705 PD-(D/E)XK nuclease superfamily LTQ54_05405 PF00580 UvrD/REP helicase N-terminal domain LTQ54_05415 PF17946 RecC C-terminal domain LTQ54_05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_05425 PF03466 LysR substrate binding domain LTQ54_05430 PF07130 YebG protein LTQ54_05445 PF01914 MarC family integral membrane protein LTQ54_05450 PF02872 5'-nucleotidase, C-terminal domain LTQ54_05450 PF00149 Calcineurin-like phosphoesterase LTQ54_05455 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LTQ54_05455 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_05465 PF02769 AIR synthase related protein, C-terminal domain LTQ54_05465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LTQ54_05465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LTQ54_05470 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_05470 PF01464 Transglycosylase SLT domain LTQ54_05475 PF14437 MafB19-like deaminase LTQ54_05480 PF03471 Transporter associated domain LTQ54_05480 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_05480 PF00571 CBS domain LTQ54_05485 PF03806 AbgT putative transporter family LTQ54_05510 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LTQ54_05510 PF07963 Prokaryotic N-terminal methylation motif LTQ54_05515 PF00226 DnaJ domain LTQ54_05515 PF01556 DnaJ C terminal domain LTQ54_05515 PF00684 DnaJ central domain LTQ54_05520 PF00012 Hsp70 protein LTQ54_05525 PF13006 Insertion element 4 transposase N-terminal LTQ54_05525 PF01609 Transposase DDE domain LTQ54_05535 PF00375 Sodium:dicarboxylate symporter family LTQ54_05540 PF01025 GrpE LTQ54_05545 PF01513 ATP-NAD kinase LTQ54_05550 PF02463 RecF/RecN/SMC N terminal domain LTQ54_05555 PF04355 SmpA / OmlA family LTQ54_05560 PF03658 RnfH family Ubiquitin LTQ54_05565 PF03364 Polyketide cyclase / dehydrase and lipid transport LTQ54_05570 PF01668 SmpB protein LTQ54_05580 PF08443 RimK-like ATP-grasp domain LTQ54_05580 PF18030 RimK PreATP-grasp domain LTQ54_05605 PF01553 Acyltransferase LTQ54_05610 PF00753 Metallo-beta-lactamase superfamily LTQ54_05610 PF10996 Beta-Casp domain LTQ54_05610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LTQ54_05615 PF01235 Sodium:alanine symporter family LTQ54_05620 PF01184 GPR1/FUN34/yaaH family LTQ54_05625 PF03553 Na+/H+ antiporter family LTQ54_05630 PF00704 Glycosyl hydrolases family 18 LTQ54_05630 PF06483 Chitinase C LTQ54_05635 PF00958 GMP synthase C terminal domain LTQ54_05635 PF02540 NAD synthase LTQ54_05635 PF00117 Glutamine amidotransferase class-I LTQ54_05640 PF00571 CBS domain LTQ54_05640 PF00478 IMP dehydrogenase / GMP reductase domain LTQ54_05645 PF13742 OB-fold nucleic acid binding domain LTQ54_05645 PF02601 Exonuclease VII, large subunit LTQ54_05650 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_05655 PF01730 UreF LTQ54_05665 PF05194 UreE urease accessory protein, C-terminal domain LTQ54_05665 PF02814 UreE urease accessory protein, N-terminal domain LTQ54_05670 PF01979 Amidohydrolase family LTQ54_05670 PF00449 Urease alpha-subunit, N-terminal domain LTQ54_05675 PF00699 Urease beta subunit LTQ54_05680 PF00547 Urease, gamma subunit LTQ54_05685 PF01774 UreD urease accessory protein LTQ54_05690 PF00005 ABC transporter LTQ54_05695 PF12399 Branched-chain amino acid ATP-binding cassette transporter LTQ54_05695 PF00005 ABC transporter LTQ54_05705 PF02653 Branched-chain amino acid transport system / permease component LTQ54_05720 PF08448 PAS fold LTQ54_05720 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_05730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LTQ54_05730 PF01926 50S ribosome-binding GTPase LTQ54_05735 PF13360 PQQ-like domain LTQ54_05740 PF09976 Tetratricopeptide repeat-like domain LTQ54_05745 PF03129 Anticodon binding domain LTQ54_05745 PF13393 Histidyl-tRNA synthetase LTQ54_05750 PF04551 GcpE protein LTQ54_05755 PF13464 Domain of unknown function (DUF4115) LTQ54_05760 PF04055 Radical SAM superfamily LTQ54_05765 PF00334 Nucleoside diphosphate kinase LTQ54_05770 PF00883 Cytosol aminopeptidase family, catalytic domain LTQ54_05770 PF12404 Peptidase LTQ54_05775 PF04384 Iron-sulphur cluster assembly LTQ54_05780 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_05785 PF00012 Hsp70 protein LTQ54_05790 PF00226 DnaJ domain LTQ54_05790 PF07743 HSCB C-terminal oligomerisation domain LTQ54_05795 PF01521 Iron-sulphur cluster biosynthesis LTQ54_05800 PF01592 NifU-like N terminal domain LTQ54_05805 PF00266 Aminotransferase class-V LTQ54_05810 PF02082 Transcriptional regulator LTQ54_05815 PF00588 SpoU rRNA Methylase family LTQ54_05820 PF00459 Inositol monophosphatase family LTQ54_05825 PF07549 SecD/SecF GG Motif LTQ54_05825 PF02355 Protein export membrane protein LTQ54_05830 PF07549 SecD/SecF GG Motif LTQ54_05830 PF02355 Protein export membrane protein LTQ54_05830 PF13721 SecD export protein N-terminal TM region LTQ54_05835 PF02699 Preprotein translocase subunit LTQ54_05840 PF01702 Queuine tRNA-ribosyltransferase LTQ54_05845 PF02547 Queuosine biosynthesis protein LTQ54_05850 PF00571 CBS domain LTQ54_05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_05870 PF03466 LysR substrate binding domain LTQ54_05875 PF10417 C-terminal domain of 1-Cys peroxiredoxin LTQ54_05875 PF00578 AhpC/TSA family LTQ54_05880 PF03932 CutC family LTQ54_05885 PF03466 LysR substrate binding domain LTQ54_05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_05900 PF01895 PhoU domain LTQ54_05905 PF00005 ABC transporter LTQ54_05910 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_05915 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_05920 PF17941 Polyphosphate kinase C-terminal domain 1 LTQ54_05920 PF02503 Polyphosphate kinase middle domain LTQ54_05920 PF13089 Polyphosphate kinase N-terminal domain LTQ54_05920 PF13090 Polyphosphate kinase C-terminal domain 2 LTQ54_05925 PF02541 Ppx/GppA phosphatase family LTQ54_05930 PF12849 PBP superfamily domain LTQ54_05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_05935 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_05935 PF00989 PAS fold LTQ54_05935 PF11808 Phosphate regulon sensor protein PhoR LTQ54_05940 PF00486 Transcriptional regulatory protein, C terminal LTQ54_05940 PF00072 Response regulator receiver domain LTQ54_05945 PF04381 Putative exonuclease, RdgC LTQ54_05950 PF01136 Peptidase family U32 LTQ54_05950 PF16325 Peptidase family U32 C-terminal domain LTQ54_05955 PF12838 4Fe-4S dicluster domain LTQ54_05965 PF03411 Penicillin-insensitive murein endopeptidase LTQ54_06000 PF07724 AAA domain (Cdc48 subfamily) LTQ54_06000 PF17871 AAA lid domain LTQ54_06000 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_06000 PF02861 Clp amino terminal domain, pathogenicity island component LTQ54_06000 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_06005 PF02578 Multi-copper polyphenol oxidoreductase laccase LTQ54_06010 PF00849 RNA pseudouridylate synthase LTQ54_06010 PF01479 S4 domain LTQ54_06015 PF13525 Outer membrane lipoprotein LTQ54_06020 PF01464 Transglycosylase SLT domain LTQ54_06025 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LTQ54_06030 PF00800 Prephenate dehydratase LTQ54_06030 PF01817 Chorismate mutase type II LTQ54_06035 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_06035 PF00563 EAL domain LTQ54_06040 PF01931 Protein of unknown function DUF84 LTQ54_06045 PF01371 Trp repressor protein LTQ54_06050 PF14718 Soluble lytic murein transglycosylase L domain LTQ54_06050 PF01464 Transglycosylase SLT domain LTQ54_06055 PF00005 ABC transporter LTQ54_06055 PF12848 ABC transporter LTQ54_06060 PF07238 PilZ domain LTQ54_06065 PF01551 Peptidase family M23 LTQ54_06065 PF04225 Opacity-associated protein A LysM-like domain LTQ54_06070 PF02153 Prephenate dehydrogenase LTQ54_06070 PF01817 Chorismate mutase type II LTQ54_06075 PF00793 DAHP synthetase I family LTQ54_06080 PF00933 Glycosyl hydrolase family 3 N terminal domain LTQ54_06085 PF03702 Anhydro-N-acetylmuramic acid kinase LTQ54_06090 PF13580 SIS domain LTQ54_06100 PF02554 Carbon starvation protein CstA LTQ54_06105 PF06580 Histidine kinase LTQ54_06105 PF07694 5TMR of 5TMR-LYT LTQ54_06110 PF00072 Response regulator receiver domain LTQ54_06110 PF04397 LytTr DNA-binding domain LTQ54_06115 PF02401 LytB protein LTQ54_06120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_06125 PF01252 Signal peptidase (SPase) II LTQ54_06130 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_06130 PF08264 Anticodon-binding domain of tRNA LTQ54_06130 PF06827 Zinc finger found in FPG and IleRS LTQ54_06135 PF06574 FAD synthetase LTQ54_06135 PF01687 Riboflavin kinase LTQ54_06140 PF03023 Lipid II flippase MurJ LTQ54_06145 PF01649 Ribosomal protein S20 LTQ54_06150 PF01022 Bacterial regulatory protein, arsR family LTQ54_06155 PF03466 LysR substrate binding domain LTQ54_06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_06160 PF02690 Na+/Pi-cotransporter LTQ54_06170 PF00072 Response regulator receiver domain LTQ54_06170 PF00486 Transcriptional regulatory protein, C terminal LTQ54_06175 PF00303 Thymidylate synthase LTQ54_06180 PF01790 Prolipoprotein diacylglyceryl transferase LTQ54_06185 PF01925 Sulfite exporter TauE/SafE LTQ54_06195 PF00293 NUDIX domain LTQ54_06200 PF02976 DNA mismatch repair enzyme MutH LTQ54_06215 PF06505 Activator of aromatic catabolism LTQ54_06215 PF02830 V4R domain LTQ54_06215 PF00158 Sigma-54 interaction domain LTQ54_06215 PF02954 Bacterial regulatory protein, Fis family LTQ54_06220 PF00152 tRNA synthetases class II (D, K and N) LTQ54_06220 PF01336 OB-fold nucleic acid binding domain LTQ54_06230 PF17768 RecJ OB domain LTQ54_06230 PF01368 DHH family LTQ54_06230 PF02272 DHHA1 domain LTQ54_06235 PF13098 Thioredoxin-like domain LTQ54_06235 PF10411 Disulfide bond isomerase protein N-terminus LTQ54_06240 PF00589 Phage integrase family LTQ54_06240 PF02899 Phage integrase, N-terminal SAM-like domain LTQ54_06245 PF00258 Flavodoxin LTQ54_06250 PF05525 Branched-chain amino acid transport protein LTQ54_06255 PF05175 Methyltransferase small domain LTQ54_06260 PF00270 DEAD/DEAH box helicase LTQ54_06260 PF00271 Helicase conserved C-terminal domain LTQ54_06265 PF03883 Peroxide stress protein YaaA LTQ54_06270 PF01235 Sodium:alanine symporter family LTQ54_06285 PF03167 Uracil DNA glycosylase superfamily LTQ54_06290 PF01261 Xylose isomerase-like TIM barrel LTQ54_06295 PF01228 Glycine radical LTQ54_06300 PF14821 Threonine synthase N terminus LTQ54_06300 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_06305 PF00288 GHMP kinases N terminal domain LTQ54_06305 PF08544 GHMP kinases C terminal LTQ54_06310 PF00696 Amino acid kinase family LTQ54_06310 PF13840 ACT domain LTQ54_06310 PF00742 Homoserine dehydrogenase LTQ54_06310 PF03447 Homoserine dehydrogenase, NAD binding domain LTQ54_06310 PF01842 ACT domain LTQ54_06320 PF03737 Aldolase/RraA LTQ54_06325 PF00072 Response regulator receiver domain LTQ54_06325 PF00486 Transcriptional regulatory protein, C terminal LTQ54_06335 PF18415 Histidine kinase receptor ArcB trans-membrane domain LTQ54_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_06335 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_06335 PF01627 Hpt domain LTQ54_06335 PF00989 PAS fold LTQ54_06335 PF00072 Response regulator receiver domain LTQ54_06340 PF00563 EAL domain LTQ54_06340 PF01590 GAF domain LTQ54_06340 PF00360 Phytochrome region LTQ54_06340 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_06345 PF16199 Radical_SAM C-terminal domain LTQ54_06345 PF04055 Radical SAM superfamily LTQ54_06350 PF04898 Glutamate synthase central domain LTQ54_06350 PF00310 Glutamine amidotransferases class-II LTQ54_06350 PF01645 Conserved region in glutamate synthase LTQ54_06350 PF01493 GXGXG motif LTQ54_06355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LTQ54_06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_06360 PF00310 Glutamine amidotransferases class-II LTQ54_06360 PF04898 Glutamate synthase central domain LTQ54_06360 PF01645 Conserved region in glutamate synthase LTQ54_06360 PF01493 GXGXG motif LTQ54_06365 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_06365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LTQ54_06375 PF01048 Phosphorylase superfamily LTQ54_06385 PF01497 Periplasmic binding protein LTQ54_06390 PF03458 UPF0126 domain LTQ54_06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_06400 PF03466 LysR substrate binding domain LTQ54_06405 PF01925 Sulfite exporter TauE/SafE LTQ54_06410 PF02142 MGS-like domain LTQ54_06410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LTQ54_06410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LTQ54_06415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LTQ54_06415 PF00117 Glutamine amidotransferase class-I LTQ54_06420 PF01113 Dihydrodipicolinate reductase, N-terminus LTQ54_06420 PF05173 Dihydrodipicolinate reductase, C-terminus LTQ54_06425 PF00293 NUDIX domain LTQ54_06430 PF07516 SecA Wing and Scaffold domain LTQ54_06430 PF07517 SecA DEAD-like domain LTQ54_06430 PF02810 SEC-C motif LTQ54_06430 PF01043 SecA preprotein cross-linking domain LTQ54_06435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LTQ54_06440 PF00091 Tubulin/FtsZ family, GTPase domain LTQ54_06440 PF12327 FtsZ family, C-terminal domain LTQ54_06445 PF02491 SHS2 domain inserted in FTSA LTQ54_06450 PF03799 Cell division protein FtsQ LTQ54_06450 PF08478 POTRA domain, FtsQ-type LTQ54_06455 PF02875 Mur ligase family, glutamate ligase domain LTQ54_06455 PF01225 Mur ligase family, catalytic domain LTQ54_06455 PF08245 Mur ligase middle domain LTQ54_06460 PF04101 Glycosyltransferase family 28 C-terminal domain LTQ54_06460 PF03033 Glycosyltransferase family 28 N-terminal domain LTQ54_06465 PF01098 Cell cycle protein LTQ54_06470 PF08245 Mur ligase middle domain LTQ54_06470 PF02875 Mur ligase family, glutamate ligase domain LTQ54_06475 PF00953 Glycosyl transferase family 4 LTQ54_06475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LTQ54_06480 PF01225 Mur ligase family, catalytic domain LTQ54_06480 PF02875 Mur ligase family, glutamate ligase domain LTQ54_06480 PF08245 Mur ligase middle domain LTQ54_06485 PF01225 Mur ligase family, catalytic domain LTQ54_06485 PF02875 Mur ligase family, glutamate ligase domain LTQ54_06485 PF08245 Mur ligase middle domain LTQ54_06490 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_06490 PF00905 Penicillin binding protein transpeptidase domain LTQ54_06495 PF04999 Cell division protein FtsL LTQ54_06500 PF01795 MraW methylase family LTQ54_06510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_06515 PF04348 LppC putative lipoprotein LTQ54_06520 PF02021 Uncharacterised protein family UPF0102 LTQ54_06525 PF13580 SIS domain LTQ54_06530 PF04972 BON domain LTQ54_06535 PF04386 Stringent starvation protein B LTQ54_06540 PF00043 Glutathione S-transferase, C-terminal domain LTQ54_06540 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_06545 PF02167 Cytochrome C1 family LTQ54_06550 PF00032 Cytochrome b(C-terminal)/b6/petD LTQ54_06550 PF00033 Cytochrome b/b6/petB LTQ54_06555 PF00355 Rieske [2Fe-2S] domain LTQ54_06555 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LTQ54_06560 PF00380 Ribosomal protein S9/S16 LTQ54_06565 PF00572 Ribosomal protein L13 LTQ54_06570 PF03969 AFG1-like ATPase LTQ54_06575 PF06295 Protein of unknown function (DUF1043) LTQ54_06580 PF00595 PDZ domain LTQ54_06585 PF13180 PDZ domain LTQ54_06590 PF03989 DNA gyrase C-terminal domain, beta-propeller LTQ54_06590 PF00521 DNA gyrase/topoisomerase IV, subunit A LTQ54_06595 PF01751 Toprim domain LTQ54_06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_06595 PF00986 DNA gyrase B subunit, carboxyl terminus LTQ54_06595 PF00204 DNA gyrase B LTQ54_06600 PF05728 Uncharacterised protein family (UPF0227) LTQ54_06605 PF00149 Calcineurin-like phosphoesterase LTQ54_06610 PF06853 Protein of unknown function (DUF1249) LTQ54_06615 PF00293 NUDIX domain LTQ54_06620 PF02321 Outer membrane efflux protein LTQ54_06625 PF01467 Cytidylyltransferase-like LTQ54_06625 PF00294 pfkB family carbohydrate kinase LTQ54_06630 PF08335 GlnD PII-uridylyltransferase LTQ54_06630 PF03710 Glutamate-ammonia ligase adenylyltransferase LTQ54_06635 PF02743 Cache domain LTQ54_06635 PF00672 HAMP domain LTQ54_06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_06640 PF07885 Ion channel LTQ54_06645 PF01928 CYTH domain LTQ54_06650 PF01865 Protein of unknown function DUF47 LTQ54_06655 PF01384 Phosphate transporter family LTQ54_06660 PF08239 Bacterial SH3 domain LTQ54_06670 PF13401 AAA domain LTQ54_06670 PF01471 Putative peptidoglycan binding domain LTQ54_06675 PF01966 HD domain LTQ54_06675 PF01743 Poly A polymerase head domain LTQ54_06675 PF12627 Probable RNA and SrmB- binding site of polymerase A LTQ54_06680 PF02673 Bacitracin resistance protein BacA LTQ54_06685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_06690 PF02152 Dihydroneopterin aldolase LTQ54_06695 PF02660 Glycerol-3-phosphate acyltransferase LTQ54_06700 PF12697 Alpha/beta hydrolase family LTQ54_06705 PF00814 Glycoprotease family LTQ54_06710 PF01165 Ribosomal protein S21 LTQ54_06715 PF09424 Yqey-like protein LTQ54_06720 PF01807 CHC2 zinc finger LTQ54_06720 PF08275 DNA primase catalytic core, N-terminal domain LTQ54_06720 PF08278 DNA primase DnaG DnaB-binding LTQ54_06720 PF10410 DnaB-helicase binding domain of primase LTQ54_06725 PF00140 Sigma-70 factor, region 1.2 LTQ54_06725 PF03979 Sigma-70 factor, region 1.1 LTQ54_06725 PF04542 Sigma-70 region 2 LTQ54_06725 PF04539 Sigma-70 region 3 LTQ54_06725 PF04545 Sigma-70, region 4 LTQ54_06725 PF04546 Sigma-70, non-essential region LTQ54_06735 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_06740 PF01380 SIS domain LTQ54_06745 PF08220 DeoR-like helix-turn-helix domain LTQ54_06745 PF00455 DeoR C terminal sensor domain LTQ54_06750 PF00224 Pyruvate kinase, barrel domain LTQ54_06750 PF02887 Pyruvate kinase, alpha/beta domain LTQ54_06755 PF07729 FCD domain LTQ54_06755 PF00392 Bacterial regulatory proteins, gntR family LTQ54_06760 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_06760 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_06765 PF10369 Small subunit of acetolactate synthase LTQ54_06770 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_06770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_06770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_06775 PF00501 AMP-binding enzyme LTQ54_06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_06780 PF03466 LysR substrate binding domain LTQ54_06790 PF01569 PAP2 superfamily LTQ54_06795 PF00873 AcrB/AcrD/AcrF family LTQ54_06810 PF08502 LeuA allosteric (dimerisation) domain LTQ54_06810 PF00682 HMGL-like LTQ54_06815 PF00180 Isocitrate/isopropylmalate dehydrogenase LTQ54_06820 PF00330 Aconitase family (aconitate hydratase) LTQ54_06825 PF00694 Aconitase C-terminal domain LTQ54_06840 PF05099 Tellurite resistance protein TerB LTQ54_06840 PF00226 DnaJ domain LTQ54_06845 PF03968 OstA-like protein LTQ54_06845 PF04453 LPS transport system D LTQ54_06850 PF00639 PPIC-type PPIASE domain LTQ54_06850 PF09312 SurA N-terminal domain LTQ54_06855 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LTQ54_06860 PF00398 Ribosomal RNA adenine dimethylase LTQ54_06865 PF04379 ApaG domain LTQ54_06870 PF00149 Calcineurin-like phosphoesterase LTQ54_06875 PF00186 Dihydrofolate reductase LTQ54_06880 PF12821 Threonine/Serine exporter, ThrE LTQ54_06885 PF06738 Putative threonine/serine exporter LTQ54_06890 PF01018 GTP1/OBG LTQ54_06890 PF01926 50S ribosome-binding GTPase LTQ54_06895 PF01016 Ribosomal L27 protein LTQ54_06900 PF00829 Ribosomal prokaryotic L21 protein LTQ54_06905 PF00348 Polyprenyl synthetase LTQ54_06915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LTQ54_06915 PF00056 lactate/malate dehydrogenase, NAD binding domain LTQ54_06920 PF01316 Arginine repressor, DNA binding domain LTQ54_06920 PF02863 Arginine repressor, C-terminal domain LTQ54_06935 PF00582 Universal stress protein family LTQ54_06940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_06940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_06945 PF00849 RNA pseudouridylate synthase LTQ54_06955 PF18337 RapA N-terminal Tudor like domain LTQ54_06955 PF18339 RapA N-terminal Tudor like domain 1 LTQ54_06955 PF00176 SNF2 family N-terminal domain LTQ54_06955 PF12137 RNA polymerase recycling family C-terminal LTQ54_06955 PF00271 Helicase conserved C-terminal domain LTQ54_06960 PF13638 PIN domain LTQ54_06960 PF02562 PhoH-like protein LTQ54_06965 PF13006 Insertion element 4 transposase N-terminal LTQ54_06965 PF01609 Transposase DDE domain LTQ54_06970 PF01523 Putative modulator of DNA gyrase LTQ54_06975 PF00795 Carbon-nitrogen hydrolase LTQ54_06990 PF02545 Maf-like protein LTQ54_06995 PF04093 rod shape-determining protein MreD LTQ54_07000 PF04085 rod shape-determining protein MreC LTQ54_07035 PF07963 Prokaryotic N-terminal methylation motif LTQ54_07040 PF07963 Prokaryotic N-terminal methylation motif LTQ54_07050 PF00482 Type II secretion system (T2SS), protein F LTQ54_07055 PF00437 Type II/IV secretion system protein LTQ54_07055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LTQ54_07065 PF13401 AAA domain LTQ54_07065 PF01471 Putative peptidoglycan binding domain LTQ54_07070 PF00263 Bacterial type II and III secretion system protein LTQ54_07070 PF03958 Bacterial type II/III secretion system short domain LTQ54_07090 PF00563 EAL domain LTQ54_07090 PF17157 Gammaproteobacterial periplasmic sensor domain LTQ54_07090 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_07095 PF00436 Single-strand binding protein family LTQ54_07100 PF00196 Bacterial regulatory proteins, luxR family LTQ54_07105 PF00483 Nucleotidyl transferase LTQ54_07110 PF17755 UvrA DNA-binding domain LTQ54_07110 PF17760 UvrA interaction domain LTQ54_07110 PF00005 ABC transporter LTQ54_07120 PF00266 Aminotransferase class-V LTQ54_07125 PF00696 Amino acid kinase family LTQ54_07125 PF01842 ACT domain LTQ54_07130 PF02574 Homocysteine S-methyltransferase LTQ54_07130 PF02310 B12 binding domain LTQ54_07130 PF02607 B12 binding domain LTQ54_07130 PF02965 Vitamin B12 dependent methionine synthase, activation domain LTQ54_07130 PF00809 Pterin binding enzyme LTQ54_07135 PF00999 Sodium/hydrogen exchanger family LTQ54_07210 PF01507 Phosphoadenosine phosphosulfate reductase family LTQ54_07215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_07215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_07220 PF00667 FAD binding domain LTQ54_07220 PF00258 Flavodoxin LTQ54_07220 PF00175 Oxidoreductase NAD-binding domain LTQ54_07235 PF09583 Phage shock protein G (Phageshock_PspG) LTQ54_07240 PF01207 Dihydrouridine synthase (Dus) LTQ54_07280 PF01475 Ferric uptake regulator family LTQ54_07290 PF00342 Phosphoglucose isomerase LTQ54_07295 PF01894 Uncharacterised protein family UPF0047 LTQ54_07305 PF00842 Alanine racemase, C-terminal domain LTQ54_07305 PF01168 Alanine racemase, N-terminal domain LTQ54_07310 PF00772 DnaB-like helicase N terminal domain LTQ54_07310 PF03796 DnaB-like helicase C terminal domain LTQ54_07320 PF03948 Ribosomal protein L9, C-terminal domain LTQ54_07320 PF01281 Ribosomal protein L9, N-terminal domain LTQ54_07325 PF01084 Ribosomal protein S18 LTQ54_07330 PF01250 Ribosomal protein S6 LTQ54_07335 PF00588 SpoU rRNA Methylase family LTQ54_07335 PF08032 RNA 2'-O ribose methyltransferase substrate binding LTQ54_07340 PF17876 Cold shock domain LTQ54_07340 PF08461 Ribonuclease R winged-helix domain LTQ54_07340 PF08206 Ribonuclease B OB domain LTQ54_07340 PF00773 RNB domain LTQ54_07340 PF00575 S1 RNA binding domain LTQ54_07345 PF01979 Amidohydrolase family LTQ54_07350 PF08238 Sel1 repeat LTQ54_07355 PF00709 Adenylosuccinate synthetase LTQ54_07360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LTQ54_07365 PF01145 SPFH domain / Band 7 family LTQ54_07370 PF01145 SPFH domain / Band 7 family LTQ54_07370 PF12221 Bacterial membrane protein N terminal LTQ54_07375 PF16360 GTP-binding GTPase Middle Region LTQ54_07375 PF13167 GTP-binding GTPase N-terminal LTQ54_07375 PF01926 50S ribosome-binding GTPase LTQ54_07380 PF17209 Hfq protein LTQ54_07390 PF01119 DNA mismatch repair protein, C-terminal domain LTQ54_07390 PF08676 MutL C terminal dimerisation domain LTQ54_07395 PF01520 N-acetylmuramoyl-L-alanine amidase LTQ54_07400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LTQ54_07405 PF08331 Domain of unknown function (DUF1730) LTQ54_07495 PF00929 Exonuclease LTQ54_07500 PF03193 RsgA GTPase LTQ54_07505 PF02666 Phosphatidylserine decarboxylase LTQ54_07510 PF03600 Citrate transporter LTQ54_07510 PF02080 TrkA-C domain LTQ54_07515 PF00672 HAMP domain LTQ54_07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_07525 PF00152 tRNA synthetases class II (D, K and N) LTQ54_07530 PF00890 FAD binding domain LTQ54_07530 PF02910 Fumarate reductase flavoprotein C-term LTQ54_07535 PF13085 2Fe-2S iron-sulfur cluster binding domain LTQ54_07535 PF13183 4Fe-4S dicluster domain LTQ54_07540 PF02300 Fumarate reductase subunit C LTQ54_07545 PF02313 Fumarate reductase subunit D LTQ54_07550 PF08207 Elongation factor P (EF-P) KOW-like domain LTQ54_07550 PF01132 Elongation factor P (EF-P) OB domain LTQ54_07550 PF09285 Elongation factor P, C-terminal LTQ54_07555 PF04055 Radical SAM superfamily LTQ54_07560 PF02308 MgtC family LTQ54_07565 PF00563 EAL domain LTQ54_07565 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_07565 PF13426 PAS domain LTQ54_07575 PF08448 PAS fold LTQ54_07575 PF00563 EAL domain LTQ54_07575 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_07575 PF05231 MASE1 LTQ54_07575 PF08447 PAS fold LTQ54_07575 PF13426 PAS domain LTQ54_07580 PF00118 TCP-1/cpn60 chaperonin family LTQ54_07585 PF00166 Chaperonin 10 Kd subunit LTQ54_07590 PF01554 MatE LTQ54_07595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_07595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LTQ54_07605 PF01676 Metalloenzyme superfamily LTQ54_07605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LTQ54_07610 PF02719 Polysaccharide biosynthesis protein LTQ54_07615 PF02397 Bacterial sugar transferase LTQ54_07620 PF01370 NAD dependent epimerase/dehydratase family LTQ54_07630 PF01370 NAD dependent epimerase/dehydratase family LTQ54_07635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LTQ54_07635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LTQ54_07635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LTQ54_07650 PF00534 Glycosyl transferases group 1 LTQ54_07650 PF13439 Glycosyltransferase Family 4 LTQ54_07665 PF01943 Polysaccharide biosynthesis protein LTQ54_07675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LTQ54_07680 PF05523 WxcM-like, C-terminal LTQ54_07685 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LTQ54_07690 PF04321 RmlD substrate binding domain LTQ54_07695 PF00483 Nucleotidyl transferase LTQ54_07700 PF16363 GDP-mannose 4,6 dehydratase LTQ54_07730 PF13807 G-rich domain on putative tyrosine kinase LTQ54_07730 PF13614 AAA domain LTQ54_07730 PF02706 Chain length determinant protein LTQ54_07735 PF01451 Low molecular weight phosphotyrosine protein phosphatase LTQ54_07740 PF10531 SLBB domain LTQ54_07740 PF02563 Polysaccharide biosynthesis/export protein LTQ54_07740 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LTQ54_07745 PF06082 Exopolysaccharide biosynthesis protein YbjH LTQ54_07765 PF00581 Rhodanese-like domain LTQ54_07770 PF02556 Preprotein translocase subunit SecB LTQ54_07775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LTQ54_07775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LTQ54_07780 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_07780 PF06426 Serine acetyltransferase, N-terminal LTQ54_07785 PF01551 Peptidase family M23 LTQ54_07790 PF08360 QacR-like protein, C-terminal region LTQ54_07790 PF00440 Bacterial regulatory proteins, tetR family LTQ54_07795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LTQ54_07795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LTQ54_07795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LTQ54_07800 PF01370 NAD dependent epimerase/dehydratase family LTQ54_07805 PF03279 Bacterial lipid A biosynthesis acyltransferase LTQ54_07810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LTQ54_07815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LTQ54_07825 PF08666 SAF domain LTQ54_07825 PF03102 NeuB family LTQ54_07835 PF02348 Cytidylyltransferase LTQ54_07840 PF00977 Histidine biosynthesis protein LTQ54_07845 PF00117 Glutamine amidotransferase class-I LTQ54_07855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LTQ54_07860 PF02719 Polysaccharide biosynthesis protein LTQ54_07875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LTQ54_07880 PF00535 Glycosyl transferase family 2 LTQ54_07885 PF00535 Glycosyl transferase family 2 LTQ54_07890 PF01467 Cytidylyltransferase-like LTQ54_07895 PF05686 Glycosyl transferase family 90 LTQ54_07900 PF01219 Prokaryotic diacylglycerol kinase LTQ54_07910 PF06827 Zinc finger found in FPG and IleRS LTQ54_07910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LTQ54_07910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LTQ54_07920 PF00471 Ribosomal protein L33 LTQ54_07925 PF00830 Ribosomal L28 family LTQ54_07930 PF04002 RadC-like JAB domain LTQ54_07935 PF04127 DNA / pantothenate metabolism flavoprotein LTQ54_07935 PF02441 Flavoprotein LTQ54_07940 PF00440 Bacterial regulatory proteins, tetR family LTQ54_07945 PF03279 Bacterial lipid A biosynthesis acyltransferase LTQ54_07950 PF00156 Phosphoribosyl transferase domain LTQ54_07955 PF03725 3' exoribonuclease family, domain 2 LTQ54_07955 PF01138 3' exoribonuclease family, domain 1 LTQ54_07960 PF03755 YicC-like family, N-terminal region LTQ54_07960 PF08340 Domain of unknown function (DUF1732) LTQ54_07965 PF00313 'Cold-shock' DNA-binding domain LTQ54_07995 PF00860 Permease family LTQ54_08000 PF00625 Guanylate kinase LTQ54_08005 PF01192 RNA polymerase Rpb6 LTQ54_08010 PF02824 TGS domain LTQ54_08010 PF04607 Region found in RelA / SpoT proteins LTQ54_08010 PF13291 ACT domain LTQ54_08015 PF00270 DEAD/DEAH box helicase LTQ54_08015 PF00271 Helicase conserved C-terminal domain LTQ54_08015 PF17191 RecG wedge domain LTQ54_08020 PF00672 HAMP domain LTQ54_08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_08020 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_08025 PF00072 Response regulator receiver domain LTQ54_08025 PF00486 Transcriptional regulatory protein, C terminal LTQ54_08030 PF03449 Transcription elongation factor, N-terminal LTQ54_08030 PF01272 Transcription elongation factor, GreA/GreB, C-term LTQ54_08035 PF17674 HHH domain LTQ54_08035 PF00575 S1 RNA binding domain LTQ54_08035 PF16921 Tex protein YqgF-like domain LTQ54_08035 PF09371 Tex-like protein N-terminal domain LTQ54_08045 PF00561 alpha/beta hydrolase fold LTQ54_08050 PF00156 Phosphoribosyl transferase domain LTQ54_08055 PF01521 Iron-sulphur cluster biosynthesis LTQ54_08055 PF01106 NifU-like domain LTQ54_08060 PF00293 NUDIX domain LTQ54_08065 PF00459 Inositol monophosphatase family LTQ54_08075 PF01203 Type II secretion system (T2SS), protein N LTQ54_08080 PF04612 Type II secretion system (T2SS), protein M LTQ54_08085 PF12693 GspL periplasmic domain LTQ54_08085 PF05134 Type II secretion system (T2SS), protein L LTQ54_08090 PF03934 Type II secretion system (T2SS), protein K LTQ54_08095 PF11612 Type II secretion system (T2SS), protein J LTQ54_08095 PF07963 Prokaryotic N-terminal methylation motif LTQ54_08100 PF07963 Prokaryotic N-terminal methylation motif LTQ54_08100 PF02501 Type II secretion system (T2SS), protein I LTQ54_08105 PF12019 Type II transport protein GspH LTQ54_08110 PF07963 Prokaryotic N-terminal methylation motif LTQ54_08110 PF08334 Type II secretion system (T2SS), protein G LTQ54_08115 PF00482 Type II secretion system (T2SS), protein F LTQ54_08120 PF00437 Type II/IV secretion system protein LTQ54_08125 PF00263 Bacterial type II and III secretion system protein LTQ54_08125 PF03958 Bacterial type II/III secretion system short domain LTQ54_08130 PF11356 Type II secretion system protein C LTQ54_08135 PF01479 S4 domain LTQ54_08140 PF01430 Hsp33 protein LTQ54_08145 PF01293 Phosphoenolpyruvate carboxykinase LTQ54_08155 PF00583 Acetyltransferase (GNAT) family LTQ54_08155 PF09500 Putative thioesterase (yiiD_Cterm) LTQ54_08160 PF02580 D-Tyr-tRNA(Tyr) deacylase LTQ54_08165 PF03631 Virulence factor BrkB LTQ54_08180 PF00679 Elongation factor G C-terminus LTQ54_08180 PF00009 Elongation factor Tu GTP binding domain LTQ54_08180 PF03144 Elongation factor Tu domain 2 LTQ54_08185 PF00120 Glutamine synthetase, catalytic domain LTQ54_08185 PF03951 Glutamine synthetase, beta-Grasp domain LTQ54_08195 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_08195 PF00989 PAS fold LTQ54_08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_08200 PF00158 Sigma-54 interaction domain LTQ54_08200 PF00072 Response regulator receiver domain LTQ54_08200 PF02954 Bacterial regulatory protein, Fis family LTQ54_08205 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_08205 PF00563 EAL domain LTQ54_08205 PF03707 Bacterial signalling protein N terminal repeat LTQ54_08210 PF06969 HemN C-terminal domain LTQ54_08210 PF04055 Radical SAM superfamily LTQ54_08215 PF10675 Protein of unknown function (DUF2489) LTQ54_08220 PF04220 Der GTPase activator (YihI) LTQ54_08230 PF00034 Cytochrome c LTQ54_08235 PF01926 50S ribosome-binding GTPase LTQ54_08245 PF01367 5'-3' exonuclease, C-terminal SAM fold LTQ54_08245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LTQ54_08245 PF00476 DNA polymerase family A LTQ54_08245 PF01612 3'-5' exonuclease LTQ54_08255 PF00490 Delta-aminolevulinic acid dehydratase LTQ54_08260 PF01026 TatD related DNase LTQ54_08265 PF00902 Sec-independent protein translocase protein (TatC) LTQ54_08270 PF02416 mttA/Hcf106 family LTQ54_08275 PF02416 mttA/Hcf106 family LTQ54_08280 PF03109 ABC1 family LTQ54_08285 PF02036 SCP-2 sterol transfer family LTQ54_08290 PF01209 ubiE/COQ5 methyltransferase family LTQ54_08295 PF02646 RmuC family LTQ54_08310 PF10625 Universal stress protein B (UspB) LTQ54_08315 PF00210 Ferritin-like domain LTQ54_08320 PF00582 Universal stress protein family LTQ54_08325 PF00892 EamA-like transporter family LTQ54_08335 PF04445 Putative SAM-dependent methyltransferase LTQ54_08340 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_08340 PF00563 EAL domain LTQ54_08340 PF08448 PAS fold LTQ54_08345 PF01037 Lrp/AsnC ligand binding domain LTQ54_08350 PF01432 Peptidase family M3 LTQ54_08355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LTQ54_08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_08360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_08365 PF00069 Protein kinase domain LTQ54_08380 PF03116 NQR2, RnfD, RnfE family LTQ54_08385 PF03793 PASTA domain LTQ54_08385 PF00069 Protein kinase domain LTQ54_08420 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_08420 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_08425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_08430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_08435 PF00005 ABC transporter LTQ54_08465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_08470 PF00580 UvrD/REP helicase N-terminal domain LTQ54_08470 PF13361 UvrD-like helicase C-terminal domain LTQ54_08475 PF00440 Bacterial regulatory proteins, tetR family LTQ54_08480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_08485 PF00873 AcrB/AcrD/AcrF family LTQ54_08490 PF04380 Membrane fusogenic activity LTQ54_08495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LTQ54_08495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LTQ54_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_08500 PF03466 LysR substrate binding domain LTQ54_08545 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_08550 PF07369 Protein of unknown function (DUF1488) LTQ54_08555 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LTQ54_08555 PF01488 Shikimate / quinate 5-dehydrogenase LTQ54_08555 PF08501 Shikimate dehydrogenase substrate binding domain LTQ54_08560 PF01218 Coproporphyrinogen III oxidase LTQ54_08565 PF01300 Telomere recombination LTQ54_08570 PF00731 AIR carboxylase LTQ54_08575 PF02222 ATP-grasp domain LTQ54_08575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LTQ54_08580 PF01396 Topoisomerase DNA binding C4 zinc finger LTQ54_08585 PF04361 Protein of unknown function (DUF494) LTQ54_08590 PF02481 DNA recombination-mediator protein A LTQ54_08590 PF17782 DprA winged helix domain LTQ54_08600 PF01327 Polypeptide deformylase LTQ54_08605 PF02911 Formyl transferase, C-terminal domain LTQ54_08605 PF00551 Formyl transferase LTQ54_08610 PF01189 16S rRNA methyltransferase RsmB/F LTQ54_08610 PF01029 NusB family LTQ54_08615 PF02080 TrkA-C domain LTQ54_08615 PF02254 TrkA-N domain LTQ54_08620 PF02386 Cation transport protein LTQ54_08630 PF03006 Haemolysin-III related LTQ54_08635 PF07070 SpoOM protein LTQ54_08645 PF06288 Protein of unknown function (DUF1040) LTQ54_08650 PF13746 4Fe-4S dicluster domain LTQ54_08650 PF12801 4Fe-4S binding domain LTQ54_08650 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LTQ54_08655 PF01636 Phosphotransferase enzyme family LTQ54_08660 PF01323 DSBA-like thioredoxin domain LTQ54_08670 PF01078 Magnesium chelatase, subunit ChlI LTQ54_08670 PF13335 Magnesium chelatase, subunit ChlI C-terminal LTQ54_08675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_08675 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_08675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_08685 PF01063 Amino-transferase class IV LTQ54_08690 PF00920 Dehydratase family LTQ54_08695 PF00585 C-terminal regulatory domain of Threonine dehydratase LTQ54_08695 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_08700 PF03466 LysR substrate binding domain LTQ54_08705 PF07690 Major Facilitator Superfamily LTQ54_08710 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_08710 PF12804 MobA-like NTP transferase domain LTQ54_08715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LTQ54_08715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LTQ54_08720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_08720 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_08725 PF00231 ATP synthase LTQ54_08730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_08730 PF00306 ATP synthase alpha/beta chain, C terminal domain LTQ54_08730 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_08735 PF00213 ATP synthase delta (OSCP) subunit LTQ54_08740 PF00430 ATP synthase B/B' CF(0) LTQ54_08745 PF00137 ATP synthase subunit C LTQ54_08750 PF00119 ATP synthase A chain LTQ54_08755 PF03899 ATP synthase I chain LTQ54_08760 PF17762 HTH domain found in ParB protein LTQ54_08760 PF02195 ParB-like nuclease domain LTQ54_08765 PF13614 AAA domain LTQ54_08770 PF02527 rRNA small subunit methyltransferase G LTQ54_08775 PF01134 Glucose inhibited division protein A LTQ54_08775 PF13932 GidA associated domain LTQ54_08780 PF00258 Flavodoxin LTQ54_08785 PF12631 MnmE helical domain LTQ54_08785 PF10396 GTP-binding protein TrmE N-terminus LTQ54_08785 PF01926 50S ribosome-binding GTPase LTQ54_08790 PF02096 60Kd inner membrane protein LTQ54_08790 PF14849 YidC periplasmic domain LTQ54_08795 PF01809 Putative membrane protein insertion efficiency factor LTQ54_08800 PF00825 Ribonuclease P LTQ54_08805 PF00468 Ribosomal protein L34 LTQ54_08810 PF00005 ABC transporter LTQ54_08815 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_08825 PF00308 Bacterial dnaA protein LTQ54_08825 PF11638 DnaA N-terminal domain LTQ54_08825 PF08299 Bacterial dnaA protein helix-turn-helix LTQ54_08830 PF00712 DNA polymerase III beta subunit, N-terminal domain LTQ54_08830 PF02767 DNA polymerase III beta subunit, central domain LTQ54_08830 PF02768 DNA polymerase III beta subunit, C-terminal domain LTQ54_08835 PF02463 RecF/RecN/SMC N terminal domain LTQ54_08840 PF00204 DNA gyrase B LTQ54_08840 PF00986 DNA gyrase B subunit, carboxyl terminus LTQ54_08840 PF18053 DNA gyrase B subunit insert domain LTQ54_08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_08840 PF01751 Toprim domain LTQ54_08845 PF00011 Hsp20/alpha crystallin family LTQ54_08850 PF00155 Aminotransferase class I and II LTQ54_08855 PF00128 Alpha amylase, catalytic domain LTQ54_08860 PF05746 DALR anticodon binding domain LTQ54_08860 PF02092 Glycyl-tRNA synthetase beta subunit LTQ54_08865 PF02091 Glycyl-tRNA synthetase alpha subunit LTQ54_08870 PF01169 Uncharacterized protein family UPF0016 LTQ54_08880 PF01206 Sulfurtransferase TusA LTQ54_08890 PF03466 LysR substrate binding domain LTQ54_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_08895 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_08895 PF00107 Zinc-binding dehydrogenase LTQ54_08900 PF00108 Thiolase, N-terminal domain LTQ54_08900 PF02803 Thiolase, C-terminal domain LTQ54_08905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LTQ54_08905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LTQ54_08905 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_08910 PF09186 Domain of unknown function (DUF1949) LTQ54_08910 PF01205 Uncharacterized protein family UPF0029 LTQ54_08915 PF02386 Cation transport protein LTQ54_08920 PF12724 Flavodoxin domain LTQ54_08965 PF07731 Multicopper oxidase LTQ54_08965 PF00394 Multicopper oxidase LTQ54_08965 PF07732 Multicopper oxidase LTQ54_08970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LTQ54_08975 PF13667 ThiC-associated domain LTQ54_08975 PF01964 Radical SAM ThiC family LTQ54_08980 PF02581 Thiamine monophosphate synthase LTQ54_08985 PF00899 ThiF family LTQ54_08990 PF02597 ThiS family LTQ54_08995 PF05690 Thiazole biosynthesis protein ThiG LTQ54_09000 PF06968 Biotin and Thiamin Synthesis associated domain LTQ54_09000 PF04055 Radical SAM superfamily LTQ54_09005 PF00557 Metallopeptidase family M24 LTQ54_09005 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_09005 PF00557 Metallopeptidase family M24 LTQ54_09005 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_09010 PF03466 LysR substrate binding domain LTQ54_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_09015 PF07690 Major Facilitator Superfamily LTQ54_09035 PF05114 Protein of unknown function (DUF692) LTQ54_09045 PF13361 UvrD-like helicase C-terminal domain LTQ54_09045 PF00580 UvrD/REP helicase N-terminal domain LTQ54_09050 PF08534 Redoxin LTQ54_09060 PF01810 LysE type translocator LTQ54_09065 PF12833 Helix-turn-helix domain LTQ54_09065 PF02311 AraC-like ligand binding domain LTQ54_09070 PF00892 EamA-like transporter family LTQ54_09075 PF00270 DEAD/DEAH box helicase LTQ54_09075 PF00271 Helicase conserved C-terminal domain LTQ54_09075 PF16124 RecQ zinc-binding LTQ54_09075 PF09382 RQC domain LTQ54_09075 PF00570 HRDC domain LTQ54_09085 PF02592 Putative vitamin uptake transporter LTQ54_09090 PF02541 Ppx/GppA phosphatase family LTQ54_09095 PF00271 Helicase conserved C-terminal domain LTQ54_09095 PF00270 DEAD/DEAH box helicase LTQ54_09100 PF00085 Thioredoxin LTQ54_09105 PF07497 Rho termination factor, RNA-binding domain LTQ54_09105 PF07498 Rho termination factor, N-terminal domain LTQ54_09105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_09115 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LTQ54_09120 PF00175 Oxidoreductase NAD-binding domain LTQ54_09120 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_09125 PF00175 Oxidoreductase NAD-binding domain LTQ54_09175 PF07219 HemY protein N-terminus LTQ54_09180 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LTQ54_09185 PF02602 Uroporphyrinogen-III synthase HemD LTQ54_09190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LTQ54_09190 PF03900 Porphobilinogen deaminase, C-terminal domain LTQ54_09195 PF12633 Adenylate cyclase NT domain LTQ54_09195 PF01295 Adenylate cyclase, class-I LTQ54_09200 PF01491 Frataxin-like domain LTQ54_09210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LTQ54_09210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LTQ54_09215 PF01678 Diaminopimelate epimerase LTQ54_09225 PF02899 Phage integrase, N-terminal SAM-like domain LTQ54_09225 PF00589 Phage integrase family LTQ54_09230 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_09235 PF08495 FIST N domain LTQ54_09235 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_09235 PF00563 EAL domain LTQ54_09235 PF10442 FIST C domain LTQ54_09240 PF08495 FIST N domain LTQ54_09240 PF10442 FIST C domain LTQ54_09240 PF00563 EAL domain LTQ54_09240 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_09245 PF03942 DTW domain LTQ54_09265 PF12146 Serine aminopeptidase, S33 LTQ54_09270 PF01810 LysE type translocator LTQ54_09275 PF08668 HDOD domain LTQ54_09275 PF00563 EAL domain LTQ54_09280 PF01022 Bacterial regulatory protein, arsR family LTQ54_09285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_09285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_09325 PF01914 MarC family integral membrane protein LTQ54_09340 PF00448 SRP54-type protein, GTPase domain LTQ54_09340 PF02881 SRP54-type protein, helical bundle domain LTQ54_09345 PF00005 ABC transporter LTQ54_09350 PF18075 FtsX extracellular domain LTQ54_09355 PF04545 Sigma-70, region 4 LTQ54_09355 PF04542 Sigma-70 region 2 LTQ54_09355 PF00140 Sigma-70 factor, region 1.2 LTQ54_09360 PF00581 Rhodanese-like domain LTQ54_09365 PF01694 Rhomboid family LTQ54_09365 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LTQ54_09370 PF03748 Flagellar basal body-associated protein FliL LTQ54_09375 PF04345 Chorismate lyase LTQ54_09380 PF01040 UbiA prenyltransferase family LTQ54_09385 PF01553 Acyltransferase LTQ54_09390 PF01219 Prokaryotic diacylglycerol kinase LTQ54_09395 PF01726 LexA DNA binding domain LTQ54_09395 PF00717 Peptidase S24-like LTQ54_09400 PF04072 Leucine carboxyl methyltransferase LTQ54_09405 PF01554 MatE LTQ54_09410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_09420 PF00440 Bacterial regulatory proteins, tetR family LTQ54_09430 PF05958 tRNA (Uracil-5-)-methyltransferase LTQ54_09435 PF00593 TonB dependent receptor LTQ54_09435 PF07715 TonB-dependent Receptor Plug Domain LTQ54_09445 PF01177 Asp/Glu/Hydantoin racemase LTQ54_09545 PF13091 PLD-like domain LTQ54_09555 PF01565 FAD binding domain LTQ54_09555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LTQ54_09560 PF02237 Biotin protein ligase C terminal domain LTQ54_09560 PF08279 HTH domain LTQ54_09560 PF03099 Biotin/lipoate A/B protein ligase family LTQ54_09565 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_09590 PF03144 Elongation factor Tu domain 2 LTQ54_09590 PF03143 Elongation factor Tu C-terminal domain LTQ54_09590 PF00009 Elongation factor Tu GTP binding domain LTQ54_09595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LTQ54_09600 PF02357 Transcription termination factor nusG LTQ54_09600 PF00467 KOW motif LTQ54_09605 PF03946 Ribosomal protein L11, N-terminal domain LTQ54_09605 PF00298 Ribosomal protein L11, RNA binding domain LTQ54_09610 PF00687 Ribosomal protein L1p/L10e family LTQ54_09615 PF00466 Ribosomal protein L10 LTQ54_09620 PF00542 Ribosomal protein L7/L12 C-terminal domain LTQ54_09620 PF16320 Ribosomal protein L7/L12 dimerisation domain LTQ54_09625 PF04563 RNA polymerase beta subunit LTQ54_09625 PF04565 RNA polymerase Rpb2, domain 3 LTQ54_09625 PF10385 RNA polymerase beta subunit external 1 domain LTQ54_09625 PF00562 RNA polymerase Rpb2, domain 6 LTQ54_09625 PF04560 RNA polymerase Rpb2, domain 7 LTQ54_09625 PF04561 RNA polymerase Rpb2, domain 2 LTQ54_09630 PF04997 RNA polymerase Rpb1, domain 1 LTQ54_09630 PF05000 RNA polymerase Rpb1, domain 4 LTQ54_09630 PF00623 RNA polymerase Rpb1, domain 2 LTQ54_09630 PF04983 RNA polymerase Rpb1, domain 3 LTQ54_09630 PF04998 RNA polymerase Rpb1, domain 5 LTQ54_09635 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LTQ54_09640 PF09297 NADH pyrophosphatase zinc ribbon domain LTQ54_09640 PF00293 NUDIX domain LTQ54_09645 PF01208 Uroporphyrinogen decarboxylase (URO-D) LTQ54_09660 PF04222 Protein of unknown function (DUF416) LTQ54_09665 PF00571 CBS domain LTQ54_09665 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_09670 PF00216 Bacterial DNA-binding protein LTQ54_09680 PF02843 Phosphoribosylglycinamide synthetase, C domain LTQ54_09680 PF02844 Phosphoribosylglycinamide synthetase, N domain LTQ54_09680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LTQ54_09685 PF01808 AICARFT/IMPCHase bienzyme LTQ54_09685 PF02142 MGS-like domain LTQ54_09690 PF13411 MerR HTH family regulatory protein LTQ54_09695 PF02954 Bacterial regulatory protein, Fis family LTQ54_09700 PF01207 Dihydrouridine synthase (Dus) LTQ54_09710 PF02785 Biotin carboxylase C-terminal domain LTQ54_09710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LTQ54_09710 PF00289 Biotin carboxylase, N-terminal domain LTQ54_09715 PF00364 Biotin-requiring enzyme LTQ54_09720 PF01220 Dehydroquinase class II LTQ54_09725 PF16177 Acetyl-coenzyme A synthetase N-terminus LTQ54_09725 PF00501 AMP-binding enzyme LTQ54_09725 PF13193 AMP-binding enzyme C-terminal domain LTQ54_09740 PF12832 MFS_1 like family LTQ54_09745 PF00672 HAMP domain LTQ54_09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_09745 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_09745 PF01627 Hpt domain LTQ54_09745 PF00072 Response regulator receiver domain LTQ54_09750 PF10415 Fumarase C C-terminus LTQ54_09750 PF00206 Lyase LTQ54_09760 PF00474 Sodium:solute symporter family LTQ54_09770 PF03471 Transporter associated domain LTQ54_09770 PF00999 Sodium/hydrogen exchanger family LTQ54_09770 PF02080 TrkA-C domain LTQ54_09775 PF00072 Response regulator receiver domain LTQ54_09775 PF00196 Bacterial regulatory proteins, luxR family LTQ54_09780 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_09780 PF11412 Disulphide bond corrector protein DsbC LTQ54_09785 PF02863 Arginine repressor, C-terminal domain LTQ54_09785 PF01316 Arginine repressor, DNA binding domain LTQ54_09790 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LTQ54_09790 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LTQ54_09795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_09795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_09800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_09800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_09805 PF00696 Amino acid kinase family LTQ54_09815 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_09820 PF03605 Anaerobic c4-dicarboxylate membrane transporter LTQ54_09825 PF10415 Fumarase C C-terminus LTQ54_09825 PF00206 Lyase LTQ54_09830 PF04186 FxsA cytoplasmic membrane protein LTQ54_09835 PF00588 SpoU rRNA Methylase family LTQ54_09840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LTQ54_09840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LTQ54_09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_09845 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_09845 PF00672 HAMP domain LTQ54_09845 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_09850 PF00072 Response regulator receiver domain LTQ54_09850 PF00486 Transcriptional regulatory protein, C terminal LTQ54_09860 PF01545 Cation efflux family LTQ54_09860 PF16916 Dimerisation domain of Zinc Transporter LTQ54_09865 PF00365 Phosphofructokinase LTQ54_09870 PF00121 Triosephosphate isomerase LTQ54_09880 PF05656 Protein of unknown function (DUF805) LTQ54_09895 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LTQ54_09900 PF06005 Cell division protein ZapB LTQ54_09905 PF03737 Aldolase/RraA LTQ54_09910 PF01040 UbiA prenyltransferase family LTQ54_09915 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_09915 PF07724 AAA domain (Cdc48 subfamily) LTQ54_09920 PF00227 Proteasome subunit LTQ54_09930 PF00356 Bacterial regulatory proteins, lacI family LTQ54_09935 PF00270 DEAD/DEAH box helicase LTQ54_09935 PF00271 Helicase conserved C-terminal domain LTQ54_09935 PF17764 3′ DNA-binding domain (3′BD) LTQ54_09935 PF18074 Primosomal protein N C-terminal domain LTQ54_09935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LTQ54_09940 PF01197 Ribosomal protein L31 LTQ54_09945 PF00390 Malic enzyme, N-terminal domain LTQ54_09945 PF03949 Malic enzyme, NAD binding domain LTQ54_09950 PF01340 Met Apo-repressor, MetJ LTQ54_09955 PF01053 Cys/Met metabolism PLP-dependent enzyme LTQ54_09960 PF00696 Amino acid kinase family LTQ54_09960 PF00742 Homoserine dehydrogenase LTQ54_09960 PF03447 Homoserine dehydrogenase, NAD binding domain LTQ54_09965 PF02219 Methylenetetrahydrofolate reductase LTQ54_09975 PF00311 Phosphoenolpyruvate carboxylase LTQ54_09980 PF01546 Peptidase family M20/M25/M40 LTQ54_09980 PF07687 Peptidase dimerisation domain LTQ54_09985 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_09985 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_09990 PF00696 Amino acid kinase family LTQ54_09995 PF00764 Arginosuccinate synthase LTQ54_10000 PF00206 Lyase LTQ54_10000 PF14698 Argininosuccinate lyase C-terminal LTQ54_10000 PF00583 Acetyltransferase (GNAT) family LTQ54_10010 PF01042 Endoribonuclease L-PSP LTQ54_10015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_10020 PF00462 Glutaredoxin LTQ54_10020 PF08534 Redoxin LTQ54_10030 PF03466 LysR substrate binding domain LTQ54_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_10035 PF00912 Transglycosylase LTQ54_10035 PF00905 Penicillin binding protein transpeptidase domain LTQ54_10035 PF17092 Penicillin-binding protein OB-like domain LTQ54_10060 PF11741 AMIN domain LTQ54_10060 PF03958 Bacterial type II/III secretion system short domain LTQ54_10060 PF07660 Secretin and TonB N terminus short domain LTQ54_10060 PF00263 Bacterial type II and III secretion system protein LTQ54_10065 PF01202 Shikimate kinase LTQ54_10070 PF01761 3-dehydroquinate synthase LTQ54_10080 PF02086 D12 class N6 adenine-specific DNA methyltransferase LTQ54_10085 PF00834 Ribulose-phosphate 3 epimerase family LTQ54_10090 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_10095 PF00579 tRNA synthetases class I (W and Y) LTQ54_10115 PF04231 Endonuclease I LTQ54_10120 PF00117 Glutamine amidotransferase class-I LTQ54_10125 PF00202 Aminotransferase class-III LTQ54_10130 PF04958 Arginine N-succinyltransferase beta subunit LTQ54_10135 PF00171 Aldehyde dehydrogenase family LTQ54_10145 PF00027 Cyclic nucleotide-binding domain LTQ54_10145 PF13545 Crp-like helix-turn-helix domain LTQ54_10150 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_10155 PF06794 Uncharacterised protein family (UPF0270) LTQ54_10160 PF00561 alpha/beta hydrolase fold LTQ54_10170 PF12848 ABC transporter LTQ54_10170 PF00005 ABC transporter LTQ54_10175 PF02525 Flavodoxin-like fold LTQ54_10180 PF00999 Sodium/hydrogen exchanger family LTQ54_10180 PF02254 TrkA-N domain LTQ54_10190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_10195 PF01112 Asparaginase LTQ54_10200 PF04102 SlyX LTQ54_10210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_10210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_10215 PF08348 YheO-like PAS domain LTQ54_10215 PF13309 HTH domain LTQ54_10220 PF02635 DsrE/DsrF-like family LTQ54_10225 PF02635 DsrE/DsrF-like family LTQ54_10235 PF00164 Ribosomal protein S12/S23 LTQ54_10240 PF00177 Ribosomal protein S7p/S5e LTQ54_10245 PF00009 Elongation factor Tu GTP binding domain LTQ54_10245 PF03144 Elongation factor Tu domain 2 LTQ54_10245 PF14492 Elongation Factor G, domain II LTQ54_10245 PF00679 Elongation factor G C-terminus LTQ54_10245 PF03764 Elongation factor G, domain IV LTQ54_10250 PF00009 Elongation factor Tu GTP binding domain LTQ54_10250 PF03144 Elongation factor Tu domain 2 LTQ54_10250 PF03143 Elongation factor Tu C-terminal domain LTQ54_10255 PF00338 Ribosomal protein S10p/S20e LTQ54_10260 PF00297 Ribosomal protein L3 LTQ54_10265 PF00573 Ribosomal protein L4/L1 family LTQ54_10270 PF00276 Ribosomal protein L23 LTQ54_10275 PF03947 Ribosomal Proteins L2, C-terminal domain LTQ54_10275 PF00181 Ribosomal Proteins L2, RNA binding domain LTQ54_10280 PF00203 Ribosomal protein S19 LTQ54_10285 PF00237 Ribosomal protein L22p/L17e LTQ54_10290 PF07650 KH domain LTQ54_10290 PF00189 Ribosomal protein S3, C-terminal domain LTQ54_10295 PF00252 Ribosomal protein L16p/L10e LTQ54_10300 PF00831 Ribosomal L29 protein LTQ54_10305 PF00366 Ribosomal protein S17 LTQ54_10310 PF00238 Ribosomal protein L14p/L23e LTQ54_10315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LTQ54_10315 PF00467 KOW motif LTQ54_10320 PF00673 ribosomal L5P family C-terminus LTQ54_10320 PF00281 Ribosomal protein L5 LTQ54_10325 PF00253 Ribosomal protein S14p/S29e LTQ54_10330 PF00410 Ribosomal protein S8 LTQ54_10335 PF00347 Ribosomal protein L6 LTQ54_10340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LTQ54_10345 PF03719 Ribosomal protein S5, C-terminal domain LTQ54_10345 PF00333 Ribosomal protein S5, N-terminal domain LTQ54_10350 PF00327 Ribosomal protein L30p/L7e LTQ54_10355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LTQ54_10360 PF00344 SecY translocase LTQ54_10365 PF00444 Ribosomal protein L36 LTQ54_10370 PF00416 Ribosomal protein S13/S18 LTQ54_10375 PF00411 Ribosomal protein S11 LTQ54_10380 PF00163 Ribosomal protein S4/S9 N-terminal domain LTQ54_10380 PF01479 S4 domain LTQ54_10385 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LTQ54_10385 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LTQ54_10385 PF01000 RNA polymerase Rpb3/RpoA insert domain LTQ54_10390 PF01196 Ribosomal protein L17 LTQ54_10400 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_10400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_10405 PF08525 Opacity-associated protein A N-terminal motif LTQ54_10405 PF04225 Opacity-associated protein A LysM-like domain LTQ54_10415 PF13673 Acetyltransferase (GNAT) domain LTQ54_10460 PF00149 Calcineurin-like phosphoesterase LTQ54_10460 PF02872 5'-nucleotidase, C-terminal domain LTQ54_10465 PF01507 Phosphoadenosine phosphosulfate reductase family LTQ54_10470 PF00009 Elongation factor Tu GTP binding domain LTQ54_10475 PF03600 Citrate transporter LTQ54_10475 PF02080 TrkA-C domain LTQ54_10500 PF00005 ABC transporter LTQ54_10510 PF10795 Protein of unknown function (DUF2607) LTQ54_10515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LTQ54_10520 PF06526 Protein of unknown function (DUF1107) LTQ54_10525 PF01625 Peptide methionine sulfoxide reductase LTQ54_10530 PF07244 Surface antigen variable number repeat LTQ54_10530 PF01103 Surface antigen LTQ54_10530 PF17243 POTRA domain TamA domain 1 LTQ54_10535 PF04357 TamB, inner membrane protein subunit of TAM complex LTQ54_10540 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LTQ54_10550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LTQ54_10555 PF01225 Mur ligase family, catalytic domain LTQ54_10555 PF08245 Mur ligase middle domain LTQ54_10555 PF02875 Mur ligase family, glutamate ligase domain LTQ54_10560 PF02441 Flavoprotein LTQ54_10570 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_10575 PF00005 ABC transporter LTQ54_10580 PF04751 Protein of unknown function (DUF615) LTQ54_10585 PF01523 Putative modulator of DNA gyrase LTQ54_10590 PF03448 MgtE intracellular N domain LTQ54_10590 PF01769 Divalent cation transporter LTQ54_10590 PF00571 CBS domain LTQ54_10595 PF00381 PTS HPr component phosphorylation site LTQ54_10600 PF03668 P-loop ATPase protein family LTQ54_10605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_10610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LTQ54_10615 PF04552 Sigma-54, DNA binding domain LTQ54_10615 PF04963 Sigma-54 factor, core binding domain LTQ54_10615 PF00309 Sigma-54 factor, Activator interacting domain (AID) LTQ54_10620 PF12399 Branched-chain amino acid ATP-binding cassette transporter LTQ54_10620 PF00005 ABC transporter LTQ54_10625 PF03968 OstA-like protein LTQ54_10640 PF00571 CBS domain LTQ54_10640 PF01380 SIS domain LTQ54_10645 PF01699 Sodium/calcium exchanger protein LTQ54_10650 PF00005 ABC transporter LTQ54_10655 PF02405 Permease MlaE LTQ54_10660 PF02470 MlaD protein LTQ54_10665 PF05494 MlaC protein LTQ54_10675 PF01722 BolA-like protein LTQ54_10680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LTQ54_10685 PF01553 Acyltransferase LTQ54_10690 PF01042 Endoribonuclease L-PSP LTQ54_10695 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LTQ54_10695 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LTQ54_10700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_10700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_10705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LTQ54_10705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LTQ54_10715 PF06877 Regulator of ribonuclease activity B LTQ54_10725 PF00583 Acetyltransferase (GNAT) family LTQ54_10735 PF05987 Bacterial protein of unknown function (DUF898) LTQ54_10740 PF01435 Peptidase family M48 LTQ54_10745 PF08264 Anticodon-binding domain of tRNA LTQ54_10745 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_10745 PF10458 Valyl tRNA synthetase tRNA binding arm LTQ54_10750 PF04364 DNA polymerase III chi subunit, HolC LTQ54_10755 PF00883 Cytosol aminopeptidase family, catalytic domain LTQ54_10755 PF02789 Cytosol aminopeptidase family, N-terminal domain LTQ54_10760 PF03739 Lipopolysaccharide export system permease LptF/LptG LTQ54_10765 PF03739 Lipopolysaccharide export system permease LptF/LptG LTQ54_10785 PF00072 Response regulator receiver domain LTQ54_10875 PF12729 Four helix bundle sensory module for signal transduction LTQ54_10875 PF00672 HAMP domain LTQ54_10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_10915 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LTQ54_10915 PF01464 Transglycosylase SLT domain LTQ54_10920 PF04362 Bacterial Fe(2+) trafficking LTQ54_10925 PF14815 NUDIX domain LTQ54_10925 PF00633 Helix-hairpin-helix motif LTQ54_10925 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_10930 PF02390 Putative methyltransferase LTQ54_10935 PF04960 Glutaminase LTQ54_10940 PF04055 Radical SAM superfamily LTQ54_10940 PF06969 HemN C-terminal domain LTQ54_10945 PF01725 Ham1 family LTQ54_10955 PF02594 Uncharacterised ACR, YggU family COG1872 LTQ54_10960 PF02325 YGGT family LTQ54_10965 PF03807 NADP oxidoreductase coenzyme F420-dependent LTQ54_10965 PF14748 Pyrroline-5-carboxylate reductase dimerisation LTQ54_10970 PF01168 Alanine racemase, N-terminal domain LTQ54_10975 PF00437 Type II/IV secretion system protein LTQ54_10980 PF00437 Type II/IV secretion system protein LTQ54_10990 PF03652 Holliday junction resolvase LTQ54_10995 PF02622 Uncharacterized ACR, COG1678 LTQ54_11000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LTQ54_11000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LTQ54_11005 PF04452 RNA methyltransferase LTQ54_11015 PF04231 Endonuclease I LTQ54_11020 PF10263 SprT-like family LTQ54_11020 PF17283 SprT-like zinc ribbon domain LTQ54_11030 PF02773 S-adenosylmethionine synthetase, C-terminal domain LTQ54_11030 PF02772 S-adenosylmethionine synthetase, central domain LTQ54_11030 PF00438 S-adenosylmethionine synthetase, N-terminal domain LTQ54_11035 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_11035 PF02779 Transketolase, pyrimidine binding domain LTQ54_11035 PF02780 Transketolase, C-terminal domain LTQ54_11040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_11040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_11045 PF00162 Phosphoglycerate kinase LTQ54_11050 PF01116 Fructose-bisphosphate aldolase class-II LTQ54_11055 PF00924 Mechanosensitive ion channel LTQ54_11055 PF05552 Conserved TM helix LTQ54_11060 PF01810 LysE type translocator LTQ54_11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_11065 PF03466 LysR substrate binding domain LTQ54_11075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_11075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_11075 PF01842 ACT domain LTQ54_11080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LTQ54_11085 PF01812 5-formyltetrahydrofolate cyclo-ligase family LTQ54_11095 PF05164 Cell division protein ZapA LTQ54_11100 PF03695 Uncharacterised protein family (UPF0149) LTQ54_11105 PF01494 FAD binding domain LTQ54_11110 PF01494 FAD binding domain LTQ54_11130 PF03937 Flavinator of succinate dehydrogenase LTQ54_11135 PF00890 FAD binding domain LTQ54_11135 PF02910 Fumarate reductase flavoprotein C-term LTQ54_11140 PF04542 Sigma-70 region 2 LTQ54_11140 PF08281 Sigma-70, region 4 LTQ54_11145 PF03873 Anti sigma-E protein RseA, C-terminal domain LTQ54_11145 PF03872 Anti sigma-E protein RseA, N-terminal domain LTQ54_11150 PF17188 MucB/RseB C-terminal domain LTQ54_11150 PF03888 MucB/RseB N-terminal domain LTQ54_11160 PF00009 Elongation factor Tu GTP binding domain LTQ54_11160 PF03144 Elongation factor Tu domain 2 LTQ54_11160 PF06421 GTP-binding protein LepA C-terminus LTQ54_11160 PF00679 Elongation factor G C-terminus LTQ54_11165 PF10502 Signal peptidase, peptidase S26 LTQ54_11170 PF14622 Ribonuclease-III-like LTQ54_11170 PF00035 Double-stranded RNA binding motif LTQ54_11175 PF07650 KH domain LTQ54_11175 PF01926 50S ribosome-binding GTPase LTQ54_11180 PF02565 Recombination protein O C terminal LTQ54_11180 PF11967 Recombination protein O N terminal LTQ54_11185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LTQ54_11190 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_11195 PF00672 HAMP domain LTQ54_11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_11195 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_11195 PF01627 Hpt domain LTQ54_11195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_11195 PF00072 Response regulator receiver domain LTQ54_11200 PF05958 tRNA (Uracil-5-)-methyltransferase LTQ54_11200 PF01938 TRAM domain LTQ54_11205 PF02824 TGS domain LTQ54_11205 PF04607 Region found in RelA / SpoT proteins LTQ54_11205 PF13291 ACT domain LTQ54_11210 PF03819 MazG nucleotide pyrophosphohydrolase domain LTQ54_11215 PF06418 CTP synthase N-terminus LTQ54_11215 PF00117 Glutamine amidotransferase class-I LTQ54_11220 PF00113 Enolase, C-terminal TIM barrel domain LTQ54_11220 PF03952 Enolase, N-terminal domain LTQ54_11225 PF04977 Septum formation initiator LTQ54_11230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LTQ54_11235 PF02542 YgbB family LTQ54_11240 PF01142 tRNA pseudouridine synthase D (TruD) LTQ54_11245 PF01975 Survival protein SurE LTQ54_11255 PF01476 LysM domain LTQ54_11255 PF01551 Peptidase family M23 LTQ54_11260 PF00140 Sigma-70 factor, region 1.2 LTQ54_11260 PF04542 Sigma-70 region 2 LTQ54_11260 PF04539 Sigma-70 region 3 LTQ54_11260 PF04545 Sigma-70, region 4 LTQ54_11265 PF05190 MutS family domain IV LTQ54_11265 PF00488 MutS domain V LTQ54_11265 PF05192 MutS domain III LTQ54_11265 PF05188 MutS domain II LTQ54_11265 PF01624 MutS domain I LTQ54_11270 PF02464 Competence-damaged protein LTQ54_11275 PF00154 recA bacterial DNA recombination protein LTQ54_11280 PF02272 DHHA1 domain LTQ54_11280 PF01411 tRNA synthetases class II (A) LTQ54_11280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LTQ54_11285 PF00696 Amino acid kinase family LTQ54_11285 PF01842 ACT domain LTQ54_11285 PF13840 ACT domain LTQ54_11290 PF02599 Global regulator protein family LTQ54_11345 PF04277 Oxaloacetate decarboxylase, gamma chain LTQ54_11350 PF00682 HMGL-like LTQ54_11350 PF00364 Biotin-requiring enzyme LTQ54_11350 PF02436 Conserved carboxylase domain LTQ54_11355 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LTQ54_11360 PF00107 Zinc-binding dehydrogenase LTQ54_11360 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_11365 PF09335 SNARE associated Golgi protein LTQ54_11370 PF05193 Peptidase M16 inactive domain LTQ54_11370 PF00675 Insulinase (Peptidase family M16) LTQ54_11375 PF04262 Glutamate-cysteine ligase LTQ54_11385 PF02664 S-Ribosylhomocysteinase (LuxS) LTQ54_11390 PF00571 CBS domain LTQ54_11390 PF03471 Transporter associated domain LTQ54_11390 PF01595 Cyclin M transmembrane N-terminal domain LTQ54_11395 PF01578 Cytochrome C assembly protein LTQ54_11400 PF00448 SRP54-type protein, GTPase domain LTQ54_11400 PF02881 SRP54-type protein, helical bundle domain LTQ54_11400 PF02978 Signal peptide binding domain LTQ54_11405 PF00886 Ribosomal protein S16 LTQ54_11410 PF01782 RimM N-terminal domain LTQ54_11410 PF05239 PRC-barrel domain LTQ54_11415 PF01746 tRNA (Guanine-1)-methyltransferase LTQ54_11420 PF01245 Ribosomal protein L19 LTQ54_11425 PF03884 DNA gyrase inhibitor YacG LTQ54_11430 PF07072 Cell division protein LTQ54_11435 PF01121 Dephospho-CoA kinase LTQ54_11440 PF06750 Bacterial Peptidase A24 N-terminal domain LTQ54_11440 PF01478 Type IV leader peptidase family LTQ54_11445 PF00482 Type II secretion system (T2SS), protein F LTQ54_11450 PF00437 Type II/IV secretion system protein LTQ54_11450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LTQ54_11455 PF07963 Prokaryotic N-terminal methylation motif LTQ54_11455 PF00114 Pilin (bacterial filament) LTQ54_11460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LTQ54_11460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LTQ54_11465 PF01510 N-acetylmuramoyl-L-alanine amidase LTQ54_11470 PF07729 FCD domain LTQ54_11470 PF00392 Bacterial regulatory proteins, gntR family LTQ54_11475 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_11475 PF17831 Pyruvate dehydrogenase E1 component middle domain LTQ54_11480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LTQ54_11480 PF00364 Biotin-requiring enzyme LTQ54_11480 PF02817 e3 binding domain LTQ54_11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_11485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LTQ54_11490 PF00440 Bacterial regulatory proteins, tetR family LTQ54_11495 PF00156 Phosphoribosyl transferase domain LTQ54_11500 PF00484 Carbonic anhydrase LTQ54_11505 PF00916 Sulfate permease family LTQ54_11505 PF01740 STAS domain LTQ54_11510 PF00005 ABC transporter LTQ54_11515 PF01061 ABC-2 type transporter LTQ54_11520 PF02569 Pantoate-beta-alanine ligase LTQ54_11525 PF02548 Ketopantoate hydroxymethyltransferase LTQ54_11530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LTQ54_11535 PF01743 Poly A polymerase head domain LTQ54_11535 PF12626 Polymerase A arginine-rich C-terminus LTQ54_11535 PF12627 Probable RNA and SrmB- binding site of polymerase A LTQ54_11540 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_11545 PF01258 Prokaryotic dksA/traR C4-type zinc finger LTQ54_11550 PF03749 Sugar fermentation stimulation protein RE domain LTQ54_11550 PF17746 SfsA N-terminal OB domain LTQ54_11555 PF00270 DEAD/DEAH box helicase LTQ54_11555 PF04408 Helicase associated domain (HA2) LTQ54_11555 PF00271 Helicase conserved C-terminal domain LTQ54_11555 PF08482 ATP-dependent helicase C-terminal LTQ54_11560 PF00912 Transglycosylase LTQ54_11560 PF00905 Penicillin binding protein transpeptidase domain LTQ54_11560 PF14814 Bifunctional transglycosylase second domain LTQ54_11565 PF01734 Patatin-like phospholipase LTQ54_11570 PF00330 Aconitase family (aconitate hydratase) LTQ54_11570 PF06434 Aconitate hydratase 2 N-terminus LTQ54_11570 PF11791 Aconitate B N-terminal domain LTQ54_11575 PF06062 Uncharacterised protein family (UPF0231) LTQ54_11580 PF00543 Nitrogen regulatory protein P-II LTQ54_11585 PF00909 Ammonium Transporter Family LTQ54_11590 PF13416 Bacterial extracellular solute-binding protein LTQ54_11600 PF08402 TOBE domain LTQ54_11600 PF00005 ABC transporter LTQ54_11605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_11605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_11605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_11605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_11610 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LTQ54_11610 PF06165 Glycosyltransferase family 36 LTQ54_11615 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_11615 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_11620 PF01869 BadF/BadG/BcrA/BcrD ATPase family LTQ54_11630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_11630 PF00005 ABC transporter LTQ54_11635 PF00005 ABC transporter LTQ54_11635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_11640 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_11640 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_11645 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_11650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_11655 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_11655 PF01627 Hpt domain LTQ54_11655 PF00072 Response regulator receiver domain LTQ54_11655 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_11655 PF00672 HAMP domain LTQ54_11660 PF05175 Methyltransferase small domain LTQ54_11660 PF08468 Methyltransferase small domain N-terminal LTQ54_11665 PF01594 AI-2E family transporter LTQ54_11670 PF00202 Aminotransferase class-III LTQ54_11675 PF01521 Iron-sulphur cluster biosynthesis LTQ54_11685 PF00873 AcrB/AcrD/AcrF family LTQ54_11690 PF01476 LysM domain LTQ54_11690 PF08525 Opacity-associated protein A N-terminal motif LTQ54_11690 PF01551 Peptidase family M23 LTQ54_11695 PF00579 tRNA synthetases class I (W and Y) LTQ54_11700 PF00571 CBS domain LTQ54_11700 PF01769 Divalent cation transporter LTQ54_11700 PF03448 MgtE intracellular N domain LTQ54_11705 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LTQ54_11710 PF13609 Gram-negative porin LTQ54_11715 PF01272 Transcription elongation factor, GreA/GreB, C-term LTQ54_11715 PF03449 Transcription elongation factor, N-terminal LTQ54_11720 PF01985 CRS1 / YhbY (CRM) domain LTQ54_11725 PF01728 FtsJ-like methyltransferase LTQ54_11730 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_11730 PF17862 AAA+ lid domain LTQ54_11730 PF06480 FtsH Extracellular LTQ54_11730 PF01434 Peptidase family M41 LTQ54_11735 PF00809 Pterin binding enzyme LTQ54_11740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_11740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_11740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_11740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_11745 PF03840 Preprotein translocase SecG subunit LTQ54_11760 PF17384 RimP C-terminal SH3 domain LTQ54_11760 PF02576 RimP N-terminal domain LTQ54_11765 PF08529 NusA N-terminal domain LTQ54_11765 PF00575 S1 RNA binding domain LTQ54_11765 PF13184 NusA-like KH domain LTQ54_11770 PF00009 Elongation factor Tu GTP binding domain LTQ54_11770 PF11987 Translation-initiation factor 2 LTQ54_11770 PF08364 Bacterial translation initiation factor IF-2 associated region LTQ54_11770 PF04760 Translation initiation factor IF-2, N-terminal region LTQ54_11775 PF02033 Ribosome-binding factor A LTQ54_11780 PF09157 Pseudouridine synthase II TruB, C-terminal LTQ54_11780 PF16198 tRNA pseudouridylate synthase B C-terminal domain LTQ54_11780 PF01509 TruB family pseudouridylate synthase (N terminal domain) LTQ54_11785 PF00312 Ribosomal protein S15 LTQ54_11790 PF00013 KH domain LTQ54_11790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LTQ54_11790 PF01138 3' exoribonuclease family, domain 1 LTQ54_11790 PF03725 3' exoribonuclease family, domain 2 LTQ54_11790 PF00575 S1 RNA binding domain LTQ54_11795 PF07719 Tetratricopeptide repeat LTQ54_11795 PF13181 Tetratricopeptide repeat LTQ54_11805 PF01554 MatE LTQ54_11810 PF01136 Peptidase family U32 LTQ54_11815 PF01136 Peptidase family U32 LTQ54_11820 PF00563 EAL domain LTQ54_11820 PF03707 Bacterial signalling protein N terminal repeat LTQ54_11820 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_11825 PF02036 SCP-2 sterol transfer family LTQ54_11830 PF13508 Acetyltransferase (GNAT) domain LTQ54_11840 PF00583 Acetyltransferase (GNAT) family LTQ54_11845 PF16658 Class II release factor RF3, C-terminal domain LTQ54_11845 PF03144 Elongation factor Tu domain 2 LTQ54_11845 PF00009 Elongation factor Tu GTP binding domain LTQ54_11855 PF01026 TatD related DNase LTQ54_11860 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_11860 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_11860 PF07670 Nucleoside recognition LTQ54_11865 PF01791 DeoC/LacD family aldolase LTQ54_11870 PF00591 Glycosyl transferase family, a/b domain LTQ54_11870 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LTQ54_11870 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_11875 PF01676 Metalloenzyme superfamily LTQ54_11880 PF01048 Phosphorylase superfamily LTQ54_11890 PF18429 Domain of unknown function (DUF5609) LTQ54_11900 PF18073 Rubredoxin metal binding domain LTQ54_11905 PF00009 Elongation factor Tu GTP binding domain LTQ54_11905 PF03144 Elongation factor Tu domain 2 LTQ54_11905 PF14492 Elongation Factor G, domain II LTQ54_11905 PF00679 Elongation factor G C-terminus LTQ54_11905 PF03764 Elongation factor G, domain IV LTQ54_11935 PF09905 DNA-binding protein VF530 LTQ54_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_11940 PF03466 LysR substrate binding domain LTQ54_11950 PF03466 LysR substrate binding domain LTQ54_11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_11970 PF00501 AMP-binding enzyme LTQ54_11975 PF02311 AraC-like ligand binding domain LTQ54_11975 PF12833 Helix-turn-helix domain LTQ54_12000 PF00263 Bacterial type II and III secretion system protein LTQ54_12000 PF04972 BON domain LTQ54_12000 PF13629 Pilus formation protein N terminal region LTQ54_12030 PF00437 Type II/IV secretion system protein LTQ54_12050 PF02417 Chromate transporter LTQ54_12055 PF03466 LysR substrate binding domain LTQ54_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_12065 PF00356 Bacterial regulatory proteins, lacI family LTQ54_12070 PF16874 Glycosyl hydrolase family 36 C-terminal domain LTQ54_12070 PF16875 Glycosyl hydrolase family 36 N-terminal domain LTQ54_12075 PF00474 Sodium:solute symporter family LTQ54_12080 PF01554 MatE LTQ54_12085 PF00005 ABC transporter LTQ54_12085 PF17912 MalK OB fold domain LTQ54_12090 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_12095 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_12105 PF00703 Glycosyl hydrolases family 2 LTQ54_12105 PF02837 Glycosyl hydrolases family 2, sugar binding domain LTQ54_12105 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LTQ54_12105 PF02929 Beta galactosidase small chain LTQ54_12105 PF16353 Domain of unknown function(DUF4981) LTQ54_12110 PF01204 Trehalase LTQ54_12120 PF13520 Amino acid permease LTQ54_12125 PF13520 Amino acid permease LTQ54_12130 PF04074 YhcH/YjgK/YiaL LTQ54_12135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LTQ54_12135 PF02929 Beta galactosidase small chain LTQ54_12135 PF16353 Domain of unknown function(DUF4981) LTQ54_12135 PF00703 Glycosyl hydrolases family 2 LTQ54_12135 PF02837 Glycosyl hydrolases family 2, sugar binding domain LTQ54_12140 PF00356 Bacterial regulatory proteins, lacI family LTQ54_12145 PF16363 GDP-mannose 4,6 dehydratase LTQ54_12150 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LTQ54_12150 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LTQ54_12155 PF08544 GHMP kinases C terminal LTQ54_12155 PF00288 GHMP kinases N terminal domain LTQ54_12155 PF10509 Galactokinase galactose-binding signature LTQ54_12160 PF01263 Aldose 1-epimerase LTQ54_12165 PF00356 Bacterial regulatory proteins, lacI family LTQ54_12170 PF01588 Putative tRNA binding domain LTQ54_12185 PF00962 Adenosine/AMP deaminase LTQ54_12205 PF07687 Peptidase dimerisation domain LTQ54_12205 PF01546 Peptidase family M20/M25/M40 LTQ54_12210 PF00860 Permease family LTQ54_12215 PF00156 Phosphoribosyl transferase domain LTQ54_12220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LTQ54_12225 PF07417 Sigma factor-binding transcriptional regulator Crl LTQ54_12230 PF01472 PUA domain LTQ54_12230 PF00696 Amino acid kinase family LTQ54_12235 PF00171 Aldehyde dehydrogenase family LTQ54_12240 PF03477 ATP cone domain LTQ54_12245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_12245 PF01872 RibD C-terminal domain LTQ54_12250 PF00677 Lumazine binding domain LTQ54_12255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LTQ54_12255 PF00925 GTP cyclohydrolase II LTQ54_12260 PF00885 6,7-dimethyl-8-ribityllumazine synthase LTQ54_12265 PF01029 NusB family LTQ54_12270 PF02769 AIR synthase related protein, C-terminal domain LTQ54_12270 PF00586 AIR synthase related protein, N-terminal domain LTQ54_12275 PF04608 Phosphatidylglycerophosphatase A LTQ54_12285 PF02779 Transketolase, pyrimidine binding domain LTQ54_12285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LTQ54_12285 PF02780 Transketolase, C-terminal domain LTQ54_12290 PF00348 Polyprenyl synthetase LTQ54_12295 PF02609 Exonuclease VII small subunit LTQ54_12300 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_12305 PF13677 Membrane MotB of proton-channel complex MotA/MotB LTQ54_12305 PF00691 OmpA family LTQ54_12310 PF02926 THUMP domain LTQ54_12310 PF02568 Thiamine biosynthesis protein (ThiI) LTQ54_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_12315 PF03466 LysR substrate binding domain LTQ54_12330 PF18125 RlmM ferredoxin-like domain LTQ54_12330 PF01728 FtsJ-like methyltransferase LTQ54_12335 PF01223 DNA/RNA non-specific endonuclease LTQ54_12340 PF01367 5'-3' exonuclease, C-terminal SAM fold LTQ54_12340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LTQ54_12345 PF11892 Domain of unknown function (DUF3412) LTQ54_12345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LTQ54_12345 PF03641 Possible lysine decarboxylase LTQ54_12350 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_12360 PF14489 QueF-like protein LTQ54_12360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LTQ54_12365 PF07348 Syd protein (SUKH-2) LTQ54_12370 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LTQ54_12375 PF02264 LamB porin LTQ54_12380 PF03180 NLPA lipoprotein LTQ54_12385 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_12390 PF00005 ABC transporter LTQ54_12390 PF09383 NIL domain LTQ54_12405 PF00356 Bacterial regulatory proteins, lacI family LTQ54_12410 PF00367 phosphotransferase system, EIIB LTQ54_12410 PF02378 Phosphotransferase system, EIIC LTQ54_12415 PF00128 Alpha amylase, catalytic domain LTQ54_12415 PF16657 Maltogenic Amylase, C-terminal domain LTQ54_12435 PF00464 Serine hydroxymethyltransferase LTQ54_12450 PF06786 Uncharacterised protein family (UPF0253) LTQ54_12460 PF03129 Anticodon binding domain LTQ54_12460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_12460 PF04073 Aminoacyl-tRNA editing domain LTQ54_12465 PF01980 tRNA-methyltransferase O LTQ54_12465 PF18389 TrmO C-terminal domain LTQ54_12470 PF01197 Ribosomal protein L31 LTQ54_12475 PF00444 Ribosomal protein L36 LTQ54_12480 PF03806 AbgT putative transporter family LTQ54_12490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LTQ54_12515 PF04287 tRNA pseudouridine synthase C LTQ54_12520 PF00849 RNA pseudouridylate synthase LTQ54_12525 PF11944 Protein of unknown function (DUF3461) LTQ54_12530 PF01909 Nucleotidyltransferase domain LTQ54_12530 PF08335 GlnD PII-uridylyltransferase LTQ54_12530 PF01842 ACT domain LTQ54_12530 PF01966 HD domain LTQ54_12535 PF00557 Metallopeptidase family M24 LTQ54_12540 PF00318 Ribosomal protein S2 LTQ54_12545 PF00889 Elongation factor TS LTQ54_12550 PF00696 Amino acid kinase family LTQ54_12555 PF01765 Ribosome recycling factor LTQ54_12560 PF01255 Putative undecaprenyl diphosphate synthase LTQ54_12570 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LTQ54_12570 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LTQ54_12570 PF13288 DXP reductoisomerase C-terminal domain LTQ54_12575 PF17820 PDZ domain LTQ54_12575 PF02163 Peptidase family M50 LTQ54_12580 PF01103 Surface antigen LTQ54_12580 PF07244 Surface antigen variable number repeat LTQ54_12585 PF03938 Outer membrane protein (OmpH-like) LTQ54_12590 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_12590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LTQ54_12595 PF07977 FabA-like domain LTQ54_12600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LTQ54_12600 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_12605 PF02684 Lipid-A-disaccharide synthetase LTQ54_12610 PF01351 Ribonuclease HII LTQ54_12615 PF14579 Helix-hairpin-helix motif LTQ54_12615 PF01336 OB-fold nucleic acid binding domain LTQ54_12615 PF02811 PHP domain LTQ54_12615 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_12615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_12620 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LTQ54_12625 PF01171 PP-loop family LTQ54_12625 PF09179 TilS substrate binding domain LTQ54_12625 PF11734 TilS substrate C-terminal domain LTQ54_12630 PF00034 Cytochrome c LTQ54_12635 PF00543 Nitrogen regulatory protein P-II LTQ54_12640 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_12650 PF01476 LysM domain LTQ54_12650 PF01464 Transglycosylase SLT domain LTQ54_12655 PF16123 Hydroxyacylglutathione hydrolase C-terminus LTQ54_12655 PF00753 Metallo-beta-lactamase superfamily LTQ54_12660 PF08241 Methyltransferase domain LTQ54_12665 PF00075 RNase H LTQ54_12670 PF00929 Exonuclease LTQ54_12680 PF02770 Acyl-CoA dehydrogenase, middle domain LTQ54_12680 PF09317 Domain of unknown function (DUF1974) LTQ54_12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LTQ54_12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LTQ54_12685 PF13580 SIS domain LTQ54_12690 PF13230 Glutamine amidotransferases class-II LTQ54_12695 PF00551 Formyl transferase LTQ54_12700 PF00586 AIR synthase related protein, N-terminal domain LTQ54_12700 PF02769 AIR synthase related protein, C-terminal domain LTQ54_12710 PF00860 Permease family LTQ54_12725 PF03358 NADPH-dependent FMN reductase LTQ54_12730 PF03960 ArsC family LTQ54_12735 PF13181 Tetratricopeptide repeat LTQ54_12735 PF01435 Peptidase family M48 LTQ54_12745 PF01594 AI-2E family transporter LTQ54_12750 PF00578 AhpC/TSA family LTQ54_12755 PF01842 ACT domain LTQ54_12760 PF00701 Dihydrodipicolinate synthetase family LTQ54_12765 PF06804 NlpB/DapX lipoprotein LTQ54_12780 PF01546 Peptidase family M20/M25/M40 LTQ54_12780 PF07687 Peptidase dimerisation domain LTQ54_12785 PF03960 ArsC family LTQ54_12805 PF11143 Protein of unknown function (DUF2919) LTQ54_12810 PF04261 Dyp-type peroxidase family LTQ54_12815 PF00669 Bacterial flagellin N-terminal helical region LTQ54_12815 PF00700 Bacterial flagellin C-terminal helical region LTQ54_12815 PF07196 Flagellin hook IN motif LTQ54_12820 PF07196 Flagellin hook IN motif LTQ54_12820 PF00700 Bacterial flagellin C-terminal helical region LTQ54_12820 PF00669 Bacterial flagellin N-terminal helical region LTQ54_12825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LTQ54_12830 PF05524 PEP-utilising enzyme, N-terminal LTQ54_12830 PF00391 PEP-utilising enzyme, mobile domain LTQ54_12830 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_12835 PF00381 PTS HPr component phosphorylation site LTQ54_12840 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_12850 PF04354 ZipA, C-terminal FtsZ-binding domain LTQ54_12855 PF12826 Helix-hairpin-helix motif LTQ54_12855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LTQ54_12855 PF03120 NAD-dependent DNA ligase OB-fold domain LTQ54_12855 PF01653 NAD-dependent DNA ligase adenylation domain LTQ54_12855 PF00533 BRCA1 C Terminus (BRCT) domain LTQ54_12865 PF03573 outer membrane porin, OprD family LTQ54_12880 PF13411 MerR HTH family regulatory protein LTQ54_12890 PF16200 C-terminal region of band_7 LTQ54_12890 PF01145 SPFH domain / Band 7 family LTQ54_12895 PF00085 Thioredoxin LTQ54_12900 PF00106 short chain dehydrogenase LTQ54_12905 PF08338 Domain of unknown function (DUF1731) LTQ54_12905 PF01370 NAD dependent epimerase/dehydratase family LTQ54_12910 PF07556 Protein of unknown function (DUF1538) LTQ54_12915 PF07556 Protein of unknown function (DUF1538) LTQ54_12930 PF12850 Calcineurin-like phosphoesterase superfamily domain LTQ54_12940 PF17323 Trans-membrane regulatory protein ToxS LTQ54_12945 PF00486 Transcriptional regulatory protein, C terminal LTQ54_12950 PF00183 Hsp90 protein LTQ54_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_12955 PF05191 Adenylate kinase, active site lid LTQ54_12960 PF00762 Ferrochelatase LTQ54_12965 PF00854 POT family LTQ54_12970 PF02357 Transcription termination factor nusG LTQ54_12975 PF00733 Asparagine synthase LTQ54_12975 PF13537 Glutamine amidotransferase domain LTQ54_12980 PF00999 Sodium/hydrogen exchanger family LTQ54_12980 PF02254 TrkA-N domain LTQ54_12985 PF01047 MarR family LTQ54_12985 PF00480 ROK family LTQ54_12990 PF01979 Amidohydrolase family LTQ54_12995 PF02378 Phosphotransferase system, EIIC LTQ54_12995 PF00367 phosphotransferase system, EIIB LTQ54_13000 PF00749 tRNA synthetases class I (E and Q), catalytic domain LTQ54_13000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LTQ54_13005 PF01475 Ferric uptake regulator family LTQ54_13015 PF00258 Flavodoxin LTQ54_13025 PF12697 Alpha/beta hydrolase family LTQ54_13030 PF03925 SeqA protein C-terminal domain LTQ54_13030 PF17206 SeqA protein N-terminal domain LTQ54_13035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_13035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_13035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_13035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_13045 PF01784 NIF3 (NGG1p interacting factor 3) LTQ54_13050 PF00285 Citrate synthase, C-terminal domain LTQ54_13055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LTQ54_13060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LTQ54_13065 PF00890 FAD binding domain LTQ54_13065 PF02910 Fumarate reductase flavoprotein C-term LTQ54_13070 PF13085 2Fe-2S iron-sulfur cluster binding domain LTQ54_13075 PF16078 2-oxoglutarate dehydrogenase N-terminus LTQ54_13075 PF00676 Dehydrogenase E1 component LTQ54_13075 PF16870 2-oxoglutarate dehydrogenase C-terminal LTQ54_13075 PF02779 Transketolase, pyrimidine binding domain LTQ54_13080 PF02817 e3 binding domain LTQ54_13080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LTQ54_13080 PF00364 Biotin-requiring enzyme LTQ54_13085 PF08442 ATP-grasp domain LTQ54_13085 PF00549 CoA-ligase LTQ54_13090 PF02629 CoA binding domain LTQ54_13090 PF00549 CoA-ligase LTQ54_13095 PF00950 ABC 3 transport family LTQ54_13100 PF00005 ABC transporter LTQ54_13105 PF01297 Zinc-uptake complex component A periplasmic LTQ54_13110 PF12833 Helix-turn-helix domain LTQ54_13120 PF04023 FeoA domain LTQ54_13125 PF02421 Ferrous iron transport protein B LTQ54_13125 PF07670 Nucleoside recognition LTQ54_13125 PF07664 Ferrous iron transport protein B C terminus LTQ54_13140 PF03485 Arginyl tRNA synthetase N terminal domain LTQ54_13140 PF05746 DALR anticodon binding domain LTQ54_13140 PF00750 tRNA synthetases class I (R) LTQ54_13145 PF06185 YecM protein LTQ54_13150 PF01842 ACT domain LTQ54_13150 PF00551 Formyl transferase LTQ54_13160 PF04851 Type III restriction enzyme, res subunit LTQ54_13160 PF13307 Helicase C-terminal domain LTQ54_13165 PF00814 Glycoprotease family LTQ54_13180 PF00561 alpha/beta hydrolase fold LTQ54_13185 PF00501 AMP-binding enzyme LTQ54_13185 PF13193 AMP-binding enzyme C-terminal domain LTQ54_13190 PF01612 3'-5' exonuclease LTQ54_13190 PF00570 HRDC domain LTQ54_13195 PF03776 Septum formation topological specificity factor MinE LTQ54_13200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LTQ54_13205 PF05209 Septum formation inhibitor MinC, N-terminal domain LTQ54_13205 PF03775 Septum formation inhibitor MinC, C-terminal domain LTQ54_13210 PF05166 YcgL domain LTQ54_13215 PF13406 Transglycosylase SLT domain LTQ54_13220 PF03466 LysR substrate binding domain LTQ54_13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_13225 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_13225 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_13225 PF07670 Nucleoside recognition LTQ54_13235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LTQ54_13235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LTQ54_13250 PF01264 Chorismate synthase LTQ54_13255 PF03458 UPF0126 domain LTQ54_13260 PF04315 Elongation factor P hydroxylase LTQ54_13265 PF08891 YfcL protein LTQ54_13270 PF03358 NADPH-dependent FMN reductase LTQ54_13275 PF01266 FAD dependent oxidoreductase LTQ54_13275 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LTQ54_13280 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_13280 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_13290 PF11890 Domain of unknown function (DUF3410) LTQ54_13290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_13290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_13295 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_13295 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_13305 PF01416 tRNA pseudouridine synthase LTQ54_13310 PF17848 Acetyl-coA carboxylase zinc finger domain LTQ54_13310 PF01039 Carboxyl transferase domain LTQ54_13315 PF08245 Mur ligase middle domain LTQ54_13315 PF02875 Mur ligase family, glutamate ligase domain LTQ54_13320 PF05036 Sporulation related domain LTQ54_13325 PF02674 Colicin V production protein LTQ54_13330 PF00156 Phosphoribosyl transferase domain LTQ54_13335 PF03466 LysR substrate binding domain LTQ54_13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_13340 PF00072 Response regulator receiver domain LTQ54_13350 PF04304 Protein of unknown function (DUF454) LTQ54_13355 PF00156 Phosphoribosyl transferase domain LTQ54_13360 PF12170 DNA polymerase III tau subunit V interacting with alpha LTQ54_13360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LTQ54_13360 PF12169 DNA polymerase III subunits gamma and tau domain III LTQ54_13365 PF02575 YbaB/EbfC DNA-binding family LTQ54_13370 PF02132 RecR protein LTQ54_13370 PF13662 Toprim domain LTQ54_13375 PF00230 Major intrinsic protein LTQ54_13380 PF03692 Putative zinc- or iron-chelating domain LTQ54_13385 PF03692 Putative zinc- or iron-chelating domain LTQ54_13390 PF00245 Alkaline phosphatase LTQ54_13395 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_13410 PF13847 Methyltransferase domain LTQ54_13415 PF13426 PAS domain LTQ54_13415 PF08447 PAS fold LTQ54_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_13420 PF01263 Aldose 1-epimerase LTQ54_13425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_13425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_13430 PF01641 SelR domain LTQ54_13440 PF07023 Protein of unknown function (DUF1315) LTQ54_13445 PF00710 Asparaginase, N-terminal LTQ54_13445 PF17763 Glutaminase/Asparaginase C-terminal domain LTQ54_13450 PF01343 Peptidase family S49 LTQ54_13455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_13455 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_13460 PF00881 Nitroreductase family LTQ54_13465 PF01751 Toprim domain LTQ54_13465 PF01131 DNA topoisomerase LTQ54_13475 PF00106 short chain dehydrogenase LTQ54_13480 PF00850 Histone deacetylase domain LTQ54_13485 PF02743 Cache domain LTQ54_13485 PF00672 HAMP domain LTQ54_13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_13495 PF02082 Transcriptional regulator LTQ54_13510 PF00012 Hsp70 protein LTQ54_13515 PF00226 DnaJ domain LTQ54_13515 PF01556 DnaJ C terminal domain LTQ54_13515 PF00684 DnaJ central domain LTQ54_13525 PF11893 Domain of unknown function (DUF3413) LTQ54_13525 PF00884 Sulfatase LTQ54_13530 PF07208 Protein of unknown function (DUF1414) LTQ54_13535 PF04245 37-kD nucleoid-associated bacterial protein LTQ54_13550 PF03553 Na+/H+ antiporter family LTQ54_13555 PF02774 Semialdehyde dehydrogenase, dimerisation domain LTQ54_13555 PF01118 Semialdehyde dehydrogenase, NAD binding domain LTQ54_13560 PF00520 Ion transport protein LTQ54_13560 PF00027 Cyclic nucleotide-binding domain LTQ54_13565 PF01914 MarC family integral membrane protein LTQ54_13570 PF00465 Iron-containing alcohol dehydrogenase LTQ54_13570 PF00171 Aldehyde dehydrogenase family LTQ54_13585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LTQ54_13585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LTQ54_13590 PF00462 Glutaredoxin LTQ54_13600 PF03553 Na+/H+ antiporter family LTQ54_13600 PF13726 Na+-H+ antiporter family LTQ54_13605 PF00929 Exonuclease LTQ54_13610 PF18393 MotY N-terminal domain LTQ54_13610 PF00691 OmpA family LTQ54_13615 PF10952 Protein of unknown function (DUF2753) LTQ54_13620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_13625 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_13625 PF00633 Helix-hairpin-helix motif LTQ54_13625 PF10576 Iron-sulfur binding domain of endonuclease III LTQ54_13630 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_13635 PF04205 FMN-binding domain LTQ54_13640 PF03116 NQR2, RnfD, RnfE family LTQ54_13645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LTQ54_13645 PF12838 4Fe-4S dicluster domain LTQ54_13645 PF13375 RnfC Barrel sandwich hybrid domain LTQ54_13645 PF10531 SLBB domain LTQ54_13650 PF04060 Putative Fe-S cluster LTQ54_13655 PF02508 Rnf-Nqr subunit, membrane protein LTQ54_13665 PF17757 UvrB interaction domain LTQ54_13665 PF12344 Ultra-violet resistance protein B LTQ54_13665 PF00271 Helicase conserved C-terminal domain LTQ54_13665 PF04851 Type III restriction enzyme, res subunit LTQ54_13665 PF02151 UvrB/uvrC motif LTQ54_13670 PF00072 Response regulator receiver domain LTQ54_13670 PF02954 Bacterial regulatory protein, Fis family LTQ54_13670 PF00158 Sigma-54 interaction domain LTQ54_13675 PF01627 Hpt domain LTQ54_13680 PF01933 Uncharacterised protein family UPF0052 LTQ54_13685 PF06463 Molybdenum Cofactor Synthesis C LTQ54_13685 PF04055 Radical SAM superfamily LTQ54_13690 PF00994 Probable molybdopterin binding domain LTQ54_13695 PF01967 MoaC family LTQ54_13700 PF02597 ThiS family LTQ54_13705 PF02391 MoaE protein LTQ54_13710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_13715 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_13720 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_13720 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_13725 PF00005 ABC transporter LTQ54_13725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_13730 PF00005 ABC transporter LTQ54_13730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_13735 PF13409 Glutathione S-transferase, N-terminal domain LTQ54_13740 PF07085 DRTGG domain LTQ54_13740 PF01515 Phosphate acetyl/butaryl transferase LTQ54_13745 PF00871 Acetokinase family LTQ54_13750 PF04217 Protein of unknown function, DUF412 LTQ54_13760 PF02903 Alpha amylase, N-terminal ig-like domain LTQ54_13760 PF00128 Alpha amylase, catalytic domain LTQ54_13765 PF05230 MASE2 domain LTQ54_13765 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_13770 PF01207 Dihydrouridine synthase (Dus) LTQ54_13775 PF08334 Type II secretion system (T2SS), protein G LTQ54_13775 PF07963 Prokaryotic N-terminal methylation motif LTQ54_13780 PF02810 SEC-C motif LTQ54_13780 PF07517 SecA DEAD-like domain LTQ54_13780 PF01043 SecA preprotein cross-linking domain LTQ54_13780 PF07516 SecA Wing and Scaffold domain LTQ54_13785 PF02600 Disulfide bond formation protein DsbB LTQ54_13790 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LTQ54_13795 PF00392 Bacterial regulatory proteins, gntR family LTQ54_13795 PF07840 FadR C-terminal domain LTQ54_13805 PF01588 Putative tRNA binding domain LTQ54_13805 PF09334 tRNA synthetases class I (M) LTQ54_13810 PF10609 NUBPL iron-transfer P-loop NTPase LTQ54_13815 PF00485 Phosphoribulokinase / Uridine kinase family LTQ54_13820 PF05170 AsmA family LTQ54_13825 PF12557 Cob(I)alamin adenosyltransferase N terminal LTQ54_13825 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LTQ54_13830 PF01451 Low molecular weight phosphotyrosine protein phosphatase LTQ54_13835 PF01740 STAS domain LTQ54_13835 PF00916 Sulfate permease family LTQ54_13840 PF00575 S1 RNA binding domain LTQ54_13840 PF12111 Polyribonucleotide phosphorylase C terminal LTQ54_13840 PF10150 Ribonuclease E/G family LTQ54_13845 PF00849 RNA pseudouridylate synthase LTQ54_13845 PF01479 S4 domain LTQ54_13850 PF02545 Maf-like protein LTQ54_13855 PF02620 Large ribosomal RNA subunit accumulation protein YceD LTQ54_13860 PF01783 Ribosomal L32p protein family LTQ54_13865 PF02504 Fatty acid synthesis protein LTQ54_13870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LTQ54_13870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LTQ54_13875 PF00698 Acyl transferase domain LTQ54_13885 PF00550 Phosphopantetheine attachment site LTQ54_13890 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_13890 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_13895 PF01063 Amino-transferase class IV LTQ54_13900 PF02618 YceG-like family LTQ54_13905 PF02223 Thymidylate kinase LTQ54_13910 PF09115 DNA polymerase III, delta subunit, C terminal LTQ54_13915 PF01026 TatD related DNase LTQ54_13920 PF02378 Phosphotransferase system, EIIC LTQ54_13920 PF00367 phosphotransferase system, EIIB LTQ54_13940 PF01734 Patatin-like phospholipase LTQ54_13945 PF00224 Pyruvate kinase, barrel domain LTQ54_13945 PF02887 Pyruvate kinase, alpha/beta domain LTQ54_13950 PF00480 ROK family LTQ54_13955 PF00072 Response regulator receiver domain LTQ54_13955 PF01584 CheW-like domain LTQ54_13960 PF02811 PHP domain LTQ54_13960 PF01336 OB-fold nucleic acid binding domain LTQ54_13960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_13960 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_13960 PF14579 Helix-hairpin-helix motif LTQ54_13970 PF00154 recA bacterial DNA recombination protein LTQ54_13975 PF00106 short chain dehydrogenase LTQ54_13980 PF01343 Peptidase family S49 LTQ54_13980 PF08496 Peptidase family S49 N-terminal LTQ54_13985 PF04293 SpoVR like protein LTQ54_13990 PF04285 Protein of unknown function (DUF444) LTQ54_13995 PF06798 PrkA serine protein kinase C-terminal domain LTQ54_13995 PF08298 PrkA AAA domain LTQ54_14000 PF06629 MltA-interacting protein MipA LTQ54_14015 PF03887 YfbU domain LTQ54_14020 PF04055 Radical SAM superfamily LTQ54_14030 PF01228 Glycine radical LTQ54_14030 PF02901 Pyruvate formate lyase-like LTQ54_14045 PF00005 ABC transporter LTQ54_14050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_14055 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_14060 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_14065 PF18642 Immunomodulating metalloprotease helical domain LTQ54_14065 PF18650 Immunomodulating metalloprotease N-terminal domain LTQ54_14065 PF13402 Peptidase M60, enhancin and enhancin-like LTQ54_14070 PF03372 Endonuclease/Exonuclease/phosphatase family LTQ54_14075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_14075 PF00326 Prolyl oligopeptidase family LTQ54_14080 PF07690 Major Facilitator Superfamily LTQ54_14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_14085 PF00672 HAMP domain LTQ54_14090 PF08007 Cupin superfamily protein LTQ54_14095 PF10689 Protein of unknown function (DUF2496) LTQ54_14105 PF01925 Sulfite exporter TauE/SafE LTQ54_14110 PF06733 DEAD_2 LTQ54_14110 PF13307 Helicase C-terminal domain LTQ54_14120 PF00849 RNA pseudouridylate synthase LTQ54_14125 PF03971 Monomeric isocitrate dehydrogenase LTQ54_14135 PF00313 'Cold-shock' DNA-binding domain LTQ54_14140 PF02617 ATP-dependent Clp protease adaptor protein ClpS LTQ54_14145 PF02861 Clp amino terminal domain, pathogenicity island component LTQ54_14145 PF10431 C-terminal, D2-small domain, of ClpB protein LTQ54_14145 PF00004 ATPase family associated with various cellular activities (AAA) LTQ54_14145 PF07724 AAA domain (Cdc48 subfamily) LTQ54_14145 PF17871 AAA lid domain LTQ54_14150 PF01176 Translation initiation factor 1A / IF-1 LTQ54_14155 PF04377 Arginine-tRNA-protein transferase, C terminus LTQ54_14155 PF04376 Arginine-tRNA-protein transferase, N terminus LTQ54_14160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LTQ54_14170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LTQ54_14175 PF10692 Protein of unknown function (DUF2498) LTQ54_14180 PF08272 Topoisomerase I zinc-ribbon-like LTQ54_14180 PF01131 DNA topoisomerase LTQ54_14180 PF01751 Toprim domain LTQ54_14180 PF01396 Topoisomerase DNA binding C4 zinc finger LTQ54_14185 PF00483 Nucleotidyl transferase LTQ54_14190 PF00534 Glycosyl transferases group 1 LTQ54_14190 PF08323 Starch synthase catalytic domain LTQ54_14210 PF04993 TfoX N-terminal domain LTQ54_14210 PF04994 TfoX C-terminal domain LTQ54_14215 PF00356 Bacterial regulatory proteins, lacI family LTQ54_14220 PF02613 Nitrate reductase delta subunit LTQ54_14225 PF00072 Response regulator receiver domain LTQ54_14225 PF00486 Transcriptional regulatory protein, C terminal LTQ54_14230 PF02698 DUF218 domain LTQ54_14235 PF13847 Methyltransferase domain LTQ54_14240 PF17192 MukF middle domain LTQ54_14240 PF03882 MukF winged-helix domain LTQ54_14240 PF17193 MukF C-terminal domain LTQ54_14245 PF04288 MukE-like family LTQ54_14250 PF04310 MukB N-terminal LTQ54_14250 PF16330 MukB hinge domain LTQ54_14255 PF12838 4Fe-4S dicluster domain LTQ54_14255 PF00384 Molybdopterin oxidoreductase LTQ54_14255 PF01568 Molydopterin dinucleotide binding domain LTQ54_14255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LTQ54_14255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_14270 PF08443 RimK-like ATP-grasp domain LTQ54_14270 PF18030 RimK PreATP-grasp domain LTQ54_14275 PF08003 Protein of unknown function (DUF1698) LTQ54_14280 PF13649 Methyltransferase domain LTQ54_14285 PF01904 Protein of unknown function DUF72 LTQ54_14290 PF02938 GAD domain LTQ54_14290 PF00152 tRNA synthetases class II (D, K and N) LTQ54_14290 PF01336 OB-fold nucleic acid binding domain LTQ54_14295 PF02075 Crossover junction endodeoxyribonuclease RuvC LTQ54_14300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_14300 PF02203 Tar ligand binding domain homologue LTQ54_14300 PF00672 HAMP domain LTQ54_14305 PF07499 RuvA, C-terminal domain LTQ54_14305 PF01330 RuvA N terminal domain LTQ54_14310 PF17864 RuvB AAA lid domain LTQ54_14310 PF05491 RuvB C-terminal winged helix domain LTQ54_14310 PF05496 Holliday junction DNA helicase RuvB P-loop domain LTQ54_14315 PF01654 Cytochrome bd terminal oxidase subunit I LTQ54_14320 PF02322 Cytochrome bd terminal oxidase subunit II LTQ54_14325 PF08173 Membrane bound YbgT-like protein LTQ54_14335 PF03061 Thioesterase superfamily LTQ54_14340 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_14345 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_14355 PF07676 WD40-like Beta Propeller Repeat LTQ54_14355 PF04052 TolB amino-terminal domain LTQ54_14360 PF00691 OmpA family LTQ54_14365 PF16331 TolA binding protein trimerisation LTQ54_14365 PF13174 Tetratricopeptide repeat LTQ54_14370 PF02445 Quinolinate synthetase A protein LTQ54_14375 PF07690 Major Facilitator Superfamily LTQ54_14390 PF07715 TonB-dependent Receptor Plug Domain LTQ54_14400 PF00501 AMP-binding enzyme LTQ54_14400 PF13193 AMP-binding enzyme C-terminal domain LTQ54_14405 PF01817 Chorismate mutase type II LTQ54_14410 PF00857 Isochorismatase family LTQ54_14410 PF00550 Phosphopantetheine attachment site LTQ54_14415 PF08021 Siderophore-interacting FAD-binding domain LTQ54_14415 PF04954 Siderophore-interacting protein LTQ54_14420 PF13193 AMP-binding enzyme C-terminal domain LTQ54_14420 PF00501 AMP-binding enzyme LTQ54_14425 PF00425 chorismate binding enzyme LTQ54_14435 PF00793 DAHP synthetase I family LTQ54_14440 PF00501 AMP-binding enzyme LTQ54_14440 PF13193 AMP-binding enzyme C-terminal domain LTQ54_14440 PF00668 Condensation domain LTQ54_14440 PF00550 Phosphopantetheine attachment site LTQ54_14440 PF00975 Thioesterase domain LTQ54_14445 PF01497 Periplasmic binding protein LTQ54_14450 PF01032 FecCD transport family LTQ54_14455 PF01032 FecCD transport family LTQ54_14460 PF13193 AMP-binding enzyme C-terminal domain LTQ54_14460 PF00668 Condensation domain LTQ54_14460 PF07993 Male sterility protein LTQ54_14460 PF00550 Phosphopantetheine attachment site LTQ54_14460 PF00501 AMP-binding enzyme LTQ54_14465 PF00005 ABC transporter LTQ54_14470 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LTQ54_14470 PF01648 4'-phosphopantetheinyl transferase superfamily LTQ54_14485 PF09308 LuxQ, periplasmic LTQ54_14485 PF00072 Response regulator receiver domain LTQ54_14485 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_14490 PF06610 L-alanine exporter LTQ54_14500 PF03616 Sodium/glutamate symporter LTQ54_14520 PF01464 Transglycosylase SLT domain LTQ54_14520 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LTQ54_14540 PF03466 LysR substrate binding domain LTQ54_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_14545 PF01266 FAD dependent oxidoreductase LTQ54_14565 PF00486 Transcriptional regulatory protein, C terminal LTQ54_14565 PF00072 Response regulator receiver domain LTQ54_14570 PF00535 Glycosyl transferase family 2 LTQ54_14575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LTQ54_14585 PF08497 Radical SAM N-terminal LTQ54_14585 PF11842 Domain of unknown function (DUF3362) LTQ54_14585 PF04055 Radical SAM superfamily LTQ54_14605 PF03466 LysR substrate binding domain LTQ54_14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_14610 PF08267 Cobalamin-independent synthase, N-terminal domain LTQ54_14610 PF01717 Cobalamin-independent synthase, Catalytic domain LTQ54_14620 PF03795 YCII-related domain LTQ54_14625 PF03061 Thioesterase superfamily LTQ54_14630 PF04279 Intracellular septation protein A LTQ54_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_14640 PF03466 LysR substrate binding domain LTQ54_14645 PF00155 Aminotransferase class I and II LTQ54_14650 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_14655 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_14660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_14665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_14670 PF00375 Sodium:dicarboxylate symporter family LTQ54_14680 PF01145 SPFH domain / Band 7 family LTQ54_14680 PF16200 C-terminal region of band_7 LTQ54_14685 PF00290 Tryptophan synthase alpha chain LTQ54_14690 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_14695 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LTQ54_14695 PF00218 Indole-3-glycerol phosphate synthase LTQ54_14700 PF02885 Glycosyl transferase family, helical bundle domain LTQ54_14700 PF00591 Glycosyl transferase family, a/b domain LTQ54_14705 PF00117 Glutamine amidotransferase class-I LTQ54_14710 PF04715 Anthranilate synthase component I, N terminal region LTQ54_14710 PF00425 chorismate binding enzyme LTQ54_14715 PF08056 Tryptophan operon leader peptide LTQ54_14720 PF02811 PHP domain LTQ54_14725 PF01300 Telomere recombination LTQ54_14730 PF00849 RNA pseudouridylate synthase LTQ54_14730 PF01479 S4 domain LTQ54_14740 PF04269 Protein of unknown function, DUF440 LTQ54_14745 PF08207 Elongation factor P (EF-P) KOW-like domain LTQ54_14745 PF09285 Elongation factor P, C-terminal LTQ54_14745 PF01132 Elongation factor P (EF-P) OB domain LTQ54_14755 PF00136 DNA polymerase family B LTQ54_14755 PF03104 DNA polymerase family B, exonuclease domain LTQ54_14760 PF00196 Bacterial regulatory proteins, luxR family LTQ54_14760 PF00072 Response regulator receiver domain LTQ54_14765 PF01541 GIY-YIG catalytic domain LTQ54_14765 PF02151 UvrB/uvrC motif LTQ54_14765 PF08459 UvrC Helix-hairpin-helix N-terminal LTQ54_14770 PF01066 CDP-alcohol phosphatidyltransferase LTQ54_14795 PF00202 Aminotransferase class-III LTQ54_14800 PF16653 Saccharopine dehydrogenase C-terminal domain LTQ54_14800 PF03435 Saccharopine dehydrogenase NADP binding domain LTQ54_14805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LTQ54_14830 PF00994 Probable molybdopterin binding domain LTQ54_14835 PF01609 Transposase DDE domain LTQ54_14835 PF13006 Insertion element 4 transposase N-terminal LTQ54_14840 PF04976 DMSO reductase anchor subunit (DmsC) LTQ54_14845 PF13247 4Fe-4S dicluster domain LTQ54_14845 PF12800 4Fe-4S binding domain LTQ54_14850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_14850 PF00384 Molybdopterin oxidoreductase LTQ54_14850 PF01568 Molydopterin dinucleotide binding domain LTQ54_14855 PF02613 Nitrate reductase delta subunit LTQ54_14865 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_14865 PF00175 Oxidoreductase NAD-binding domain LTQ54_14865 PF00970 Oxidoreductase FAD-binding domain LTQ54_14870 PF00268 Ribonucleotide reductase, small chain LTQ54_14875 PF00317 Ribonucleotide reductase, all-alpha domain LTQ54_14875 PF02867 Ribonucleotide reductase, barrel domain LTQ54_14875 PF03477 ATP cone domain LTQ54_14885 PF00521 DNA gyrase/topoisomerase IV, subunit A LTQ54_14885 PF03989 DNA gyrase C-terminal domain, beta-propeller LTQ54_14895 PF00581 Rhodanese-like domain LTQ54_14900 PF02335 Cytochrome c552 LTQ54_14910 PF13247 4Fe-4S dicluster domain LTQ54_14915 PF03916 Polysulphide reductase, NrfD LTQ54_14920 PF01578 Cytochrome C assembly protein LTQ54_14920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LTQ54_14925 PF08534 Redoxin LTQ54_14930 PF03918 Cytochrome C biogenesis protein LTQ54_14940 PF00925 GTP cyclohydrolase II LTQ54_14965 PF01471 Putative peptidoglycan binding domain LTQ54_14965 PF03734 L,D-transpeptidase catalytic domain LTQ54_14970 PF05951 Bacterial protein of unknown function (DUF882) LTQ54_14975 PF00753 Metallo-beta-lactamase superfamily LTQ54_14990 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_15000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_15005 PF07730 Histidine kinase LTQ54_15005 PF17200 Single Cache domain 2 LTQ54_15010 PF00196 Bacterial regulatory proteins, luxR family LTQ54_15010 PF00072 Response regulator receiver domain LTQ54_15015 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_15020 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_15025 PF02743 Cache domain LTQ54_15025 PF00672 HAMP domain LTQ54_15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_15030 PF00664 ABC transporter transmembrane region LTQ54_15030 PF00005 ABC transporter LTQ54_15035 PF00664 ABC transporter transmembrane region LTQ54_15035 PF00005 ABC transporter LTQ54_15040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_15070 PF00266 Aminotransferase class-V LTQ54_15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_15080 PF03466 LysR substrate binding domain LTQ54_15085 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_15095 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_15095 PF00072 Response regulator receiver domain LTQ54_15100 PF06942 GlpM protein LTQ54_15105 PF00939 Sodium:sulfate symporter transmembrane region LTQ54_15110 PF02698 DUF218 domain LTQ54_15115 PF00390 Malic enzyme, N-terminal domain LTQ54_15115 PF03949 Malic enzyme, NAD binding domain LTQ54_15120 PF00271 Helicase conserved C-terminal domain LTQ54_15120 PF00270 DEAD/DEAH box helicase LTQ54_15120 PF11898 Domain of unknown function (DUF3418) LTQ54_15120 PF04408 Helicase associated domain (HA2) LTQ54_15120 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LTQ54_15130 PF01259 SAICAR synthetase LTQ54_15150 PF00691 OmpA family LTQ54_15165 PF02913 FAD linked oxidases, C-terminal domain LTQ54_15165 PF01565 FAD binding domain LTQ54_15165 PF13183 4Fe-4S dicluster domain LTQ54_15170 PF04191 Phospholipid methyltransferase LTQ54_15180 PF00221 Aromatic amino acid lyase LTQ54_15185 PF17391 Urocanase N-terminal domain LTQ54_15185 PF17392 Urocanase C-terminal domain LTQ54_15185 PF01175 Urocanase Rossmann-like domain LTQ54_15190 PF00491 Arginase family LTQ54_15195 PF01979 Amidohydrolase family LTQ54_15200 PF07702 UTRA domain LTQ54_15200 PF00392 Bacterial regulatory proteins, gntR family LTQ54_15205 PF07070 SpoOM protein LTQ54_15215 PF13356 Arm DNA-binding domain LTQ54_15215 PF00589 Phage integrase family LTQ54_15225 PF06114 IrrE N-terminal-like domain LTQ54_15270 PF01381 Helix-turn-helix LTQ54_15270 PF00717 Peptidase S24-like LTQ54_15275 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT LTQ54_15330 PF01966 HD domain LTQ54_15350 PF00959 Phage lysozyme LTQ54_15385 PF00574 Clp protease LTQ54_15510 PF04245 37-kD nucleoid-associated bacterial protein LTQ54_15515 PF03129 Anticodon binding domain LTQ54_15515 PF02824 TGS domain LTQ54_15515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LTQ54_15515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LTQ54_15520 PF00707 Translation initiation factor IF-3, C-terminal domain LTQ54_15520 PF05198 Translation initiation factor IF-3, N-terminal domain LTQ54_15525 PF01632 Ribosomal protein L35 LTQ54_15530 PF00453 Ribosomal protein L20 LTQ54_15535 PF04266 ASCH domain LTQ54_15550 PF00005 ABC transporter LTQ54_15550 PF16326 ABC transporter C-terminal domain LTQ54_15550 PF12848 ABC transporter LTQ54_15555 PF17932 Tetracyclin repressor-like, C-terminal domain LTQ54_15555 PF00440 Bacterial regulatory proteins, tetR family LTQ54_15560 PF00171 Aldehyde dehydrogenase family LTQ54_15565 PF17944 Arginine decarboxylase C-terminal helical extension LTQ54_15565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LTQ54_15565 PF17810 Arginine decarboxylase helical bundle domain LTQ54_15570 PF00491 Arginase family LTQ54_15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_15580 PF01464 Transglycosylase SLT domain LTQ54_15585 PF00474 Sodium:solute symporter family LTQ54_15590 PF01081 KDPG and KHG aldolase LTQ54_15595 PF00294 pfkB family carbohydrate kinase LTQ54_15600 PF07883 Cupin domain LTQ54_15605 PF05426 Alginate lyase LTQ54_15605 PF07940 Heparinase II/III-like protein LTQ54_15610 PF05426 Alginate lyase LTQ54_15610 PF07940 Heparinase II/III-like protein LTQ54_15615 PF01557 Fumarylacetoacetate (FAA) hydrolase family LTQ54_15620 PF00392 Bacterial regulatory proteins, gntR family LTQ54_15620 PF07729 FCD domain LTQ54_15625 PF00474 Sodium:solute symporter family LTQ54_15635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_15635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_15640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_15640 PF00672 HAMP domain LTQ54_15640 PF02743 Cache domain LTQ54_15645 PF08787 Alginate lyase LTQ54_15650 PF08787 Alginate lyase LTQ54_15665 PF08787 Alginate lyase LTQ54_15675 PF00392 Bacterial regulatory proteins, gntR family LTQ54_15675 PF07729 FCD domain LTQ54_15685 PF00392 Bacterial regulatory proteins, gntR family LTQ54_15685 PF07729 FCD domain LTQ54_15690 PF00571 CBS domain LTQ54_15695 PF00929 Exonuclease LTQ54_15695 PF02811 PHP domain LTQ54_15695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_15695 PF11490 DNA polymerase III polC-type N-terminus II LTQ54_15695 PF14579 Helix-hairpin-helix motif LTQ54_15695 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_15705 PF00672 HAMP domain LTQ54_15705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_15705 PF12729 Four helix bundle sensory module for signal transduction LTQ54_15715 PF00474 Sodium:solute symporter family LTQ54_15725 PF01625 Peptide methionine sulfoxide reductase LTQ54_15725 PF01641 SelR domain LTQ54_15740 PF01212 Beta-eliminating lyase LTQ54_15765 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_15765 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_15765 PF03413 Peptidase propeptide and YPEB domain LTQ54_15765 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_15765 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_15805 PF00939 Sodium:sulfate symporter transmembrane region LTQ54_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_15810 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_15810 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_15815 PF00158 Sigma-54 interaction domain LTQ54_15815 PF00072 Response regulator receiver domain LTQ54_15815 PF02954 Bacterial regulatory protein, Fis family LTQ54_15825 PF00753 Metallo-beta-lactamase superfamily LTQ54_15840 PF00583 Acetyltransferase (GNAT) family LTQ54_15845 PF13673 Acetyltransferase (GNAT) domain LTQ54_15855 PF01928 CYTH domain LTQ54_15875 PF01717 Cobalamin-independent synthase, Catalytic domain LTQ54_15875 PF08267 Cobalamin-independent synthase, N-terminal domain LTQ54_15885 PF01925 Sulfite exporter TauE/SafE LTQ54_15895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LTQ54_15900 PF01810 LysE type translocator LTQ54_15905 PF01117 Aerolysin toxin LTQ54_15905 PF03440 Aerolysin/Pertussis toxin (APT) domain LTQ54_15920 PF01235 Sodium:alanine symporter family LTQ54_15940 PF01235 Sodium:alanine symporter family LTQ54_15955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_15970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LTQ54_15970 PF00989 PAS fold LTQ54_15970 PF17203 Single cache domain 3 LTQ54_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_15975 PF12431 Transcriptional regulator LTQ54_15975 PF00072 Response regulator receiver domain LTQ54_15980 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LTQ54_15980 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LTQ54_15985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LTQ54_15990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LTQ54_15990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_15995 PF00072 Response regulator receiver domain LTQ54_16000 PF09905 DNA-binding protein VF530 LTQ54_16015 PF01970 Tripartite tricarboxylate transporter TctA family LTQ54_16040 PF07690 Major Facilitator Superfamily LTQ54_16055 PF00285 Citrate synthase, C-terminal domain LTQ54_16060 PF00330 Aconitase family (aconitate hydratase) LTQ54_16060 PF00694 Aconitase C-terminal domain LTQ54_16065 PF04303 PrpF protein LTQ54_16070 PF16177 Acetyl-coenzyme A synthetase N-terminus LTQ54_16070 PF13193 AMP-binding enzyme C-terminal domain LTQ54_16070 PF00501 AMP-binding enzyme LTQ54_16100 PF04055 Radical SAM superfamily LTQ54_16105 PF06508 Queuosine biosynthesis protein QueC LTQ54_16110 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_16110 PF17151 Periplasmic sensor domain LTQ54_16120 PF00691 OmpA family LTQ54_16120 PF13488 Glycine zipper LTQ54_16145 PF02310 B12 binding domain LTQ54_16145 PF02607 B12 binding domain LTQ54_16145 PF02965 Vitamin B12 dependent methionine synthase, activation domain LTQ54_16145 PF00809 Pterin binding enzyme LTQ54_16145 PF02574 Homocysteine S-methyltransferase LTQ54_16170 PF14765 Polyketide synthase dehydratase LTQ54_16170 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_16170 PF00698 Acyl transferase domain LTQ54_16170 PF02801 Beta-ketoacyl synthase, C-terminal domain LTQ54_16170 PF00109 Beta-ketoacyl synthase, N-terminal domain LTQ54_16170 PF16197 Ketoacyl-synthetase C-terminal extension LTQ54_16170 PF00550 Phosphopantetheine attachment site LTQ54_16170 PF08659 KR domain LTQ54_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_16185 PF03466 LysR substrate binding domain LTQ54_16190 PF00962 Adenosine/AMP deaminase LTQ54_16195 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_16195 PF12464 Maltose acetyltransferase LTQ54_16200 PF17853 GGDEF-like domain LTQ54_16200 PF12833 Helix-turn-helix domain LTQ54_16210 PF00392 Bacterial regulatory proteins, gntR family LTQ54_16210 PF07702 UTRA domain LTQ54_16215 PF13378 Enolase C-terminal domain-like LTQ54_16215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_16220 PF00367 phosphotransferase system, EIIB LTQ54_16220 PF02378 Phosphotransferase system, EIIC LTQ54_16225 PF00294 pfkB family carbohydrate kinase LTQ54_16230 PF01081 KDPG and KHG aldolase LTQ54_16235 PF07687 Peptidase dimerisation domain LTQ54_16235 PF01546 Peptidase family M20/M25/M40 LTQ54_16245 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_16245 PF00557 Metallopeptidase family M24 LTQ54_16250 PF13309 HTH domain LTQ54_16250 PF08348 YheO-like PAS domain LTQ54_16255 PF01042 Endoribonuclease L-PSP LTQ54_16260 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_16265 PF02600 Disulfide bond formation protein DsbB LTQ54_16280 PF01594 AI-2E family transporter LTQ54_16310 PF00924 Mechanosensitive ion channel LTQ54_16315 PF00781 Diacylglycerol kinase catalytic domain LTQ54_16315 PF02142 MGS-like domain LTQ54_16340 PF02954 Bacterial regulatory protein, Fis family LTQ54_16340 PF01590 GAF domain LTQ54_16340 PF00158 Sigma-54 interaction domain LTQ54_16345 PF13840 ACT domain LTQ54_16345 PF00696 Amino acid kinase family LTQ54_16350 PF06339 Ectoine synthase LTQ54_16355 PF00202 Aminotransferase class-III LTQ54_16360 PF00583 Acetyltransferase (GNAT) family LTQ54_16380 PF00440 Bacterial regulatory proteins, tetR family LTQ54_16380 PF16925 Tetracyclin repressor-like, C-terminal domain LTQ54_16385 PF13186 Iron-sulfur cluster-binding domain LTQ54_16385 PF04055 Radical SAM superfamily LTQ54_16390 PF00884 Sulfatase LTQ54_16400 PF00465 Iron-containing alcohol dehydrogenase LTQ54_16410 PF00171 Aldehyde dehydrogenase family LTQ54_16415 PF01047 MarR family LTQ54_16420 PF00005 ABC transporter LTQ54_16420 PF00571 CBS domain LTQ54_16425 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_16430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LTQ54_16435 PF00732 GMC oxidoreductase LTQ54_16435 PF05199 GMC oxidoreductase LTQ54_16440 PF00171 Aldehyde dehydrogenase family LTQ54_16445 PF00440 Bacterial regulatory proteins, tetR family LTQ54_16445 PF13977 BetI-type transcriptional repressor, C-terminal LTQ54_16450 PF00557 Metallopeptidase family M24 LTQ54_16450 PF01321 Creatinase/Prolidase N-terminal domain LTQ54_16455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_16465 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_16470 PF01546 Peptidase family M20/M25/M40 LTQ54_16470 PF07687 Peptidase dimerisation domain LTQ54_16480 PF01037 Lrp/AsnC ligand binding domain LTQ54_16485 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_16495 PF00072 Response regulator receiver domain LTQ54_16495 PF00486 Transcriptional regulatory protein, C terminal LTQ54_16500 PF00672 HAMP domain LTQ54_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_16500 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_16510 PF03413 Peptidase propeptide and YPEB domain LTQ54_16510 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_16510 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_16510 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_16510 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_16515 PF04389 Peptidase family M28 LTQ54_16515 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_16520 PF01266 FAD dependent oxidoreductase LTQ54_16535 PF00158 Sigma-54 interaction domain LTQ54_16535 PF00072 Response regulator receiver domain LTQ54_16535 PF02954 Bacterial regulatory protein, Fis family LTQ54_16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_16540 PF02743 Cache domain LTQ54_16540 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_16545 PF02838 Glycosyl hydrolase family 20, domain 2 LTQ54_16545 PF00728 Glycosyl hydrolase family 20, catalytic domain LTQ54_16550 PF01081 KDPG and KHG aldolase LTQ54_16555 PF00294 pfkB family carbohydrate kinase LTQ54_16560 PF00474 Sodium:solute symporter family LTQ54_16570 PF07969 Amidohydrolase family LTQ54_16580 PF02685 Glucokinase LTQ54_16580 PF01418 Helix-turn-helix domain, rpiR family LTQ54_16580 PF01380 SIS domain LTQ54_16600 PF08019 Phosphoethanolamine transferase EptA/EptB LTQ54_16600 PF00884 Sulfatase LTQ54_16605 PF01544 CorA-like Mg2+ transporter protein LTQ54_16635 PF00005 ABC transporter LTQ54_16635 PF00664 ABC transporter transmembrane region LTQ54_16640 PF04286 Protein of unknown function (DUF445) LTQ54_16645 PF01037 Lrp/AsnC ligand binding domain LTQ54_16670 PF00474 Sodium:solute symporter family LTQ54_16680 PF00171 Aldehyde dehydrogenase family LTQ54_16680 PF01619 Proline dehydrogenase LTQ54_16680 PF14850 DNA-binding domain of Proline dehydrogenase LTQ54_16680 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LTQ54_16685 PF12833 Helix-turn-helix domain LTQ54_16700 PF00196 Bacterial regulatory proteins, luxR family LTQ54_16700 PF00072 Response regulator receiver domain LTQ54_16705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LTQ54_16705 PF01243 Pyridoxamine 5'-phosphate oxidase LTQ54_16710 PF02743 Cache domain LTQ54_16710 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_16715 PF00072 Response regulator receiver domain LTQ54_16715 PF00158 Sigma-54 interaction domain LTQ54_16715 PF02954 Bacterial regulatory protein, Fis family LTQ54_16720 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_16735 PF00664 ABC transporter transmembrane region LTQ54_16735 PF03412 Peptidase C39 family LTQ54_16735 PF00005 ABC transporter LTQ54_16745 PF05127 Helicase LTQ54_16745 PF13718 GNAT acetyltransferase 2 LTQ54_16750 PF08775 ParB family LTQ54_16750 PF02195 ParB-like nuclease domain LTQ54_16755 PF13614 AAA domain LTQ54_16755 PF18607 ParA helix turn helix domain LTQ54_16770 PF00005 ABC transporter LTQ54_16770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_16775 PF00005 ABC transporter LTQ54_16775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_16785 PF00925 GTP cyclohydrolase II LTQ54_16785 PF08719 Domain of unknown function (DUF1768) LTQ54_16795 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_16795 PF00072 Response regulator receiver domain LTQ54_16795 PF01627 Hpt domain LTQ54_16795 PF00672 HAMP domain LTQ54_16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_16795 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_16800 PF00392 Bacterial regulatory proteins, gntR family LTQ54_16800 PF07702 UTRA domain LTQ54_16825 PF00005 ABC transporter LTQ54_16825 PF08402 TOBE domain LTQ54_16835 PF00486 Transcriptional regulatory protein, C terminal LTQ54_16835 PF00072 Response regulator receiver domain LTQ54_16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_16840 PF00672 HAMP domain LTQ54_16840 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_16855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_16860 PF04209 homogentisate 1,2-dioxygenase LTQ54_16870 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_16870 PF14497 Glutathione S-transferase, C-terminal domain LTQ54_16875 PF00696 Amino acid kinase family LTQ54_16880 PF13193 AMP-binding enzyme C-terminal domain LTQ54_16880 PF00501 AMP-binding enzyme LTQ54_16885 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LTQ54_16890 PF01329 Pterin 4 alpha carbinolamine dehydratase LTQ54_16900 PF01709 Transcriptional regulator LTQ54_16915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_16915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_16920 PF01546 Peptidase family M20/M25/M40 LTQ54_16920 PF07687 Peptidase dimerisation domain LTQ54_16930 PF00144 Beta-lactamase LTQ54_16935 PF01609 Transposase DDE domain LTQ54_16935 PF13006 Insertion element 4 transposase N-terminal LTQ54_16945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_16945 PF03466 LysR substrate binding domain LTQ54_16985 PF00672 HAMP domain LTQ54_16985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_16985 PF02743 Cache domain LTQ54_17000 PF00005 ABC transporter LTQ54_17005 PF02687 FtsX-like permease family LTQ54_17005 PF12704 MacB-like periplasmic core domain LTQ54_17020 PF06580 Histidine kinase LTQ54_17020 PF07694 5TMR of 5TMR-LYT LTQ54_17025 PF04397 LytTr DNA-binding domain LTQ54_17025 PF00072 Response regulator receiver domain LTQ54_17030 PF00675 Insulinase (Peptidase family M16) LTQ54_17030 PF05193 Peptidase M16 inactive domain LTQ54_17040 PF07549 SecD/SecF GG Motif LTQ54_17040 PF02355 Protein export membrane protein LTQ54_17040 PF13721 SecD export protein N-terminal TM region LTQ54_17045 PF02355 Protein export membrane protein LTQ54_17045 PF07549 SecD/SecF GG Motif LTQ54_17060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_17065 PF07690 Major Facilitator Superfamily LTQ54_17075 PF03466 LysR substrate binding domain LTQ54_17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17080 PF14863 Alkyl sulfatase dimerisation LTQ54_17080 PF00753 Metallo-beta-lactamase superfamily LTQ54_17080 PF14864 Alkyl sulfatase C-terminal LTQ54_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17085 PF03466 LysR substrate binding domain LTQ54_17105 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LTQ54_17110 PF00106 short chain dehydrogenase LTQ54_17145 PF01593 Flavin containing amine oxidoreductase LTQ54_17150 PF00106 short chain dehydrogenase LTQ54_17160 PF00875 DNA photolyase LTQ54_17160 PF03441 FAD binding domain of DNA photolyase LTQ54_17170 PF12973 ChrR Cupin-like domain LTQ54_17175 PF04542 Sigma-70 region 2 LTQ54_17175 PF04545 Sigma-70, region 4 LTQ54_17185 PF14552 Tautomerase enzyme LTQ54_17195 PF10928 Protein of unknown function (DUF2810) LTQ54_17200 PF03616 Sodium/glutamate symporter LTQ54_17205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_17205 PF18113 Rubredoxin binding C-terminal domain LTQ54_17210 PF00258 Flavodoxin LTQ54_17210 PF00753 Metallo-beta-lactamase superfamily LTQ54_17210 PF00301 Rubredoxin LTQ54_17215 PF00881 Nitroreductase family LTQ54_17225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_17225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_17225 PF02378 Phosphotransferase system, EIIC LTQ54_17230 PF08125 Mannitol dehydrogenase C-terminal domain LTQ54_17230 PF01232 Mannitol dehydrogenase Rossmann domain LTQ54_17235 PF05068 Mannitol repressor LTQ54_17240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LTQ54_17250 PF03466 LysR substrate binding domain LTQ54_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17260 PF00730 HhH-GPD superfamily base excision DNA repair protein LTQ54_17260 PF06029 AlkA N-terminal domain LTQ54_17265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LTQ54_17265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LTQ54_17275 PF03600 Citrate transporter LTQ54_17285 PF07670 Nucleoside recognition LTQ54_17290 PF07670 Nucleoside recognition LTQ54_17295 PF01124 MAPEG family LTQ54_17315 PF12852 Cupin LTQ54_17315 PF12833 Helix-turn-helix domain LTQ54_17340 PF12697 Alpha/beta hydrolase family LTQ54_17345 PF08329 Chitinase A, N-terminal domain LTQ54_17345 PF00704 Glycosyl hydrolases family 18 LTQ54_17355 PF06865 Pyrimidine/purine nucleoside phosphorylase LTQ54_17360 PF05726 Pirin C-terminal cupin domain LTQ54_17360 PF02678 Pirin LTQ54_17370 PF00563 EAL domain LTQ54_17370 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_17370 PF03707 Bacterial signalling protein N terminal repeat LTQ54_17380 PF07690 Major Facilitator Superfamily LTQ54_17385 PF00072 Response regulator receiver domain LTQ54_17385 PF00196 Bacterial regulatory proteins, luxR family LTQ54_17390 PF07730 Histidine kinase LTQ54_17390 PF05231 MASE1 LTQ54_17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_17395 PF07690 Major Facilitator Superfamily LTQ54_17400 PF01238 Phosphomannose isomerase type I LTQ54_17420 PF17773 UPF0176 acylphosphatase like domain LTQ54_17420 PF00581 Rhodanese-like domain LTQ54_17435 PF00155 Aminotransferase class I and II LTQ54_17440 PF12833 Helix-turn-helix domain LTQ54_17440 PF01497 Periplasmic binding protein LTQ54_17445 PF01554 MatE LTQ54_17450 PF00005 ABC transporter LTQ54_17450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_17455 PF00005 ABC transporter LTQ54_17460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_17465 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_17480 PF01070 FMN-dependent dehydrogenase LTQ54_17485 PF02652 L-lactate permease LTQ54_17490 PF03466 LysR substrate binding domain LTQ54_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17495 PF00326 Prolyl oligopeptidase family LTQ54_17495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_17505 PF17200 Single Cache domain 2 LTQ54_17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_17505 PF00672 HAMP domain LTQ54_17510 PF00356 Bacterial regulatory proteins, lacI family LTQ54_17520 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_17525 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_17530 PF00232 Glycosyl hydrolase family 1 LTQ54_17535 PF17912 MalK OB fold domain LTQ54_17535 PF00005 ABC transporter LTQ54_17535 PF03459 TOBE domain LTQ54_17540 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LTQ54_17540 PF06165 Glycosyltransferase family 36 LTQ54_17545 PF01263 Aldose 1-epimerase LTQ54_17555 PF00356 Bacterial regulatory proteins, lacI family LTQ54_17575 PF00005 ABC transporter LTQ54_17575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_17585 PF13654 AAA domain LTQ54_17585 PF05362 Lon protease (S16) C-terminal proteolytic domain LTQ54_17590 PF07238 PilZ domain LTQ54_17590 PF12945 Flagellar protein YcgR LTQ54_17620 PF00892 EamA-like transporter family LTQ54_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17625 PF03466 LysR substrate binding domain LTQ54_17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17650 PF03466 LysR substrate binding domain LTQ54_17660 PF01047 MarR family LTQ54_17665 PF07681 DoxX LTQ54_17675 PF01274 Malate synthase LTQ54_17680 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_17680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_17680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_17685 PF01261 Xylose isomerase-like TIM barrel LTQ54_17690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LTQ54_17690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_17695 PF13660 Domain of unknown function (DUF4147) LTQ54_17695 PF05161 MOFRL family LTQ54_17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_17705 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_17710 PF00072 Response regulator receiver domain LTQ54_17710 PF00486 Transcriptional regulatory protein, C terminal LTQ54_17720 PF00873 AcrB/AcrD/AcrF family LTQ54_17725 PF01979 Amidohydrolase family LTQ54_17740 PF01979 Amidohydrolase family LTQ54_17745 PF00860 Permease family LTQ54_17750 PF00860 Permease family LTQ54_17755 PF00576 HIUase/Transthyretin family LTQ54_17765 PF01014 Uricase LTQ54_17765 PF09349 OHCU decarboxylase LTQ54_17770 PF03561 Allantoicase repeat LTQ54_17775 PF04115 Ureidoglycolate lyase LTQ54_17790 PF04229 GrpB protein LTQ54_17805 PF13411 MerR HTH family regulatory protein LTQ54_17810 PF02627 Carboxymuconolactone decarboxylase family LTQ54_17820 PF01979 Amidohydrolase family LTQ54_17830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LTQ54_17830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LTQ54_17835 PF00941 FAD binding domain in molybdopterin dehydrogenase LTQ54_17835 PF03450 CO dehydrogenase flavoprotein C-terminal domain LTQ54_17855 PF01966 HD domain LTQ54_17860 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_17865 PF03605 Anaerobic c4-dicarboxylate membrane transporter LTQ54_17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17870 PF03466 LysR substrate binding domain LTQ54_17875 PF00171 Aldehyde dehydrogenase family LTQ54_17880 PF06441 Epoxide hydrolase N terminus LTQ54_17920 PF02264 LamB porin LTQ54_17920 PF11471 Maltoporin periplasmic N-terminal extension LTQ54_17925 PF00356 Bacterial regulatory proteins, lacI family LTQ54_17930 PF00367 phosphotransferase system, EIIB LTQ54_17930 PF02378 Phosphotransferase system, EIIC LTQ54_17935 PF00294 pfkB family carbohydrate kinase LTQ54_17940 PF08244 Glycosyl hydrolases family 32 C terminal LTQ54_17940 PF00251 Glycosyl hydrolases family 32 N-terminal domain LTQ54_17950 PF14497 Glutathione S-transferase, C-terminal domain LTQ54_17950 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_17955 PF03466 LysR substrate binding domain LTQ54_17960 PF00672 HAMP domain LTQ54_17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_17965 PF01590 GAF domain LTQ54_17965 PF02954 Bacterial regulatory protein, Fis family LTQ54_17965 PF00158 Sigma-54 interaction domain LTQ54_17970 PF00171 Aldehyde dehydrogenase family LTQ54_17975 PF00293 NUDIX domain LTQ54_17975 PF13344 Haloacid dehalogenase-like hydrolase LTQ54_17990 PF00756 Putative esterase LTQ54_17995 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_17995 PF00107 Zinc-binding dehydrogenase LTQ54_18005 PF00893 Small Multidrug Resistance protein LTQ54_18015 PF00246 Zinc carboxypeptidase LTQ54_18020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_18030 PF03707 Bacterial signalling protein N terminal repeat LTQ54_18030 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_18030 PF00563 EAL domain LTQ54_18045 PF01238 Phosphomannose isomerase type I LTQ54_18050 PF02378 Phosphotransferase system, EIIC LTQ54_18050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_18050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_18055 PF12833 Helix-turn-helix domain LTQ54_18065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_18080 PF13977 BetI-type transcriptional repressor, C-terminal LTQ54_18080 PF00440 Bacterial regulatory proteins, tetR family LTQ54_18090 PF11066 Protein of unknown function (DUF2867) LTQ54_18090 PF13460 NAD(P)H-binding LTQ54_18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_18100 PF00672 HAMP domain LTQ54_18100 PF12729 Four helix bundle sensory module for signal transduction LTQ54_18110 PF00171 Aldehyde dehydrogenase family LTQ54_18120 PF02566 OsmC-like protein LTQ54_18125 PF01047 MarR family LTQ54_18130 PF03222 Tryptophan/tyrosine permease family LTQ54_18135 PF07690 Major Facilitator Superfamily LTQ54_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18140 PF03466 LysR substrate binding domain LTQ54_18150 PF00155 Aminotransferase class I and II LTQ54_18150 PF00392 Bacterial regulatory proteins, gntR family LTQ54_18165 PF00672 HAMP domain LTQ54_18165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_18165 PF02743 Cache domain LTQ54_18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18175 PF03466 LysR substrate binding domain LTQ54_18185 PF17200 Single Cache domain 2 LTQ54_18185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_18185 PF00672 HAMP domain LTQ54_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18200 PF03466 LysR substrate binding domain LTQ54_18210 PF13378 Enolase C-terminal domain-like LTQ54_18210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_18215 PF02743 Cache domain LTQ54_18215 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_18220 PF00158 Sigma-54 interaction domain LTQ54_18220 PF00072 Response regulator receiver domain LTQ54_18220 PF02954 Bacterial regulatory protein, Fis family LTQ54_18235 PF00005 ABC transporter LTQ54_18240 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_18245 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_18270 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_18275 PF00483 Nucleotidyl transferase LTQ54_18280 PF03922 OmpW family LTQ54_18290 PF00501 AMP-binding enzyme LTQ54_18295 PF00668 Condensation domain LTQ54_18295 PF00501 AMP-binding enzyme LTQ54_18295 PF00550 Phosphopantetheine attachment site LTQ54_18295 PF13193 AMP-binding enzyme C-terminal domain LTQ54_18300 PF00106 short chain dehydrogenase LTQ54_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18305 PF03466 LysR substrate binding domain LTQ54_18310 PF01638 HxlR-like helix-turn-helix LTQ54_18325 PF13460 NAD(P)H-binding LTQ54_18330 PF03466 LysR substrate binding domain LTQ54_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LTQ54_18370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LTQ54_18375 PF04542 Sigma-70 region 2 LTQ54_18375 PF08281 Sigma-70, region 4 LTQ54_18395 PF04013 Putative SAM-dependent RNA methyltransferase LTQ54_18460 PF01554 MatE LTQ54_18465 PF00391 PEP-utilising enzyme, mobile domain LTQ54_18465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LTQ54_18465 PF02896 PEP-utilising enzyme, TIM barrel domain LTQ54_18470 PF03618 Kinase/pyrophosphorylase LTQ54_18475 PF04399 Glutaredoxin 2, C terminal domain LTQ54_18475 PF13417 Glutathione S-transferase, N-terminal domain LTQ54_18485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LTQ54_18505 PF03009 Glycerophosphoryl diester phosphodiesterase family LTQ54_18510 PF17912 MalK OB fold domain LTQ54_18510 PF00005 ABC transporter LTQ54_18515 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_18520 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_18525 PF13416 Bacterial extracellular solute-binding protein LTQ54_18545 PF18030 RimK PreATP-grasp domain LTQ54_18545 PF08443 RimK-like ATP-grasp domain LTQ54_18550 PF08443 RimK-like ATP-grasp domain LTQ54_18550 PF18030 RimK PreATP-grasp domain LTQ54_18555 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_18555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_18560 PF12706 Beta-lactamase superfamily domain LTQ54_18585 PF00171 Aldehyde dehydrogenase family LTQ54_18590 PF09339 IclR helix-turn-helix domain LTQ54_18590 PF01614 Bacterial transcriptional regulator LTQ54_18595 PF01515 Phosphate acetyl/butaryl transferase LTQ54_18600 PF01925 Sulfite exporter TauE/SafE LTQ54_18605 PF06213 Cobalamin biosynthesis protein CobT LTQ54_18605 PF11775 Cobalamin biosynthesis protein CobT VWA domain LTQ54_18610 PF08406 CbbQ/NirQ/NorQ C-terminal LTQ54_18610 PF07728 AAA domain (dynein-related subfamily) LTQ54_18610 PF12556 Cobaltochelatase CobS subunit N terminal LTQ54_18615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LTQ54_18615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LTQ54_18615 PF00205 Thiamine pyrophosphate enzyme, central domain LTQ54_18630 PF01266 FAD dependent oxidoreductase LTQ54_18635 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_18640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_18645 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LTQ54_18645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_18660 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_18670 PF05661 Protein of unknown function (DUF808) LTQ54_18675 PF01979 Amidohydrolase family LTQ54_18685 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_18685 PF03476 MOSC N-terminal beta barrel domain LTQ54_18685 PF03473 MOSC domain LTQ54_18690 PF02540 NAD synthase LTQ54_18695 PF01467 Cytidylyltransferase-like LTQ54_18735 PF00005 ABC transporter LTQ54_18740 PF01032 FecCD transport family LTQ54_18750 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_18755 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_18760 PF03544 Gram-negative bacterial TonB protein C-terminal LTQ54_18765 PF04055 Radical SAM superfamily LTQ54_18770 PF06228 Haem utilisation ChuX/HutX LTQ54_18775 PF01243 Pyridoxamine 5'-phosphate oxidase LTQ54_18780 PF01923 Cobalamin adenosyltransferase LTQ54_18785 PF01584 CheW-like domain LTQ54_18785 PF00072 Response regulator receiver domain LTQ54_18795 PF00128 Alpha amylase, catalytic domain LTQ54_18800 PF00672 HAMP domain LTQ54_18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_18800 PF02743 Cache domain LTQ54_18805 PF07670 Nucleoside recognition LTQ54_18830 PF01551 Peptidase family M23 LTQ54_18830 PF01476 LysM domain LTQ54_18830 PF08525 Opacity-associated protein A N-terminal motif LTQ54_18835 PF08447 PAS fold LTQ54_18835 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_18835 PF00563 EAL domain LTQ54_18835 PF08448 PAS fold LTQ54_18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_18840 PF03466 LysR substrate binding domain LTQ54_18845 PF07690 Major Facilitator Superfamily LTQ54_18855 PF00462 Glutaredoxin LTQ54_18860 PF00892 EamA-like transporter family LTQ54_18880 PF00085 Thioredoxin LTQ54_18885 PF11412 Disulphide bond corrector protein DsbC LTQ54_18885 PF02683 Cytochrome C biogenesis protein transmembrane region LTQ54_18900 PF05552 Conserved TM helix LTQ54_18900 PF00924 Mechanosensitive ion channel LTQ54_18945 PF00248 Aldo/keto reductase family LTQ54_18950 PF00270 DEAD/DEAH box helicase LTQ54_18950 PF03880 DbpA RNA binding domain LTQ54_18950 PF00271 Helicase conserved C-terminal domain LTQ54_18965 PF00929 Exonuclease LTQ54_18965 PF02811 PHP domain LTQ54_18965 PF14579 Helix-hairpin-helix motif LTQ54_18965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LTQ54_18965 PF07733 Bacterial DNA polymerase III alpha NTPase domain LTQ54_18965 PF11490 DNA polymerase III polC-type N-terminus II LTQ54_18975 PF00271 Helicase conserved C-terminal domain LTQ54_18975 PF00270 DEAD/DEAH box helicase LTQ54_18980 PF00881 Nitroreductase family LTQ54_18990 PF00037 4Fe-4S binding domain LTQ54_18990 PF11953 Domain of unknown function (DUF3470) LTQ54_18995 PF08032 RNA 2'-O ribose methyltransferase substrate binding LTQ54_18995 PF00588 SpoU rRNA Methylase family LTQ54_19000 PF00248 Aldo/keto reductase family LTQ54_19010 PF07687 Peptidase dimerisation domain LTQ54_19010 PF01546 Peptidase family M20/M25/M40 LTQ54_19025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_19030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_19035 PF00873 AcrB/AcrD/AcrF family LTQ54_19040 PF01575 MaoC like domain LTQ54_19045 PF12849 PBP superfamily domain LTQ54_19055 PF12833 Helix-turn-helix domain LTQ54_19060 PF17876 Cold shock domain LTQ54_19060 PF08206 Ribonuclease B OB domain LTQ54_19060 PF00773 RNB domain LTQ54_19060 PF00575 S1 RNA binding domain LTQ54_19065 PF00270 DEAD/DEAH box helicase LTQ54_19065 PF00271 Helicase conserved C-terminal domain LTQ54_19065 PF03880 DbpA RNA binding domain LTQ54_19070 PF00871 Acetokinase family LTQ54_19080 PF00571 CBS domain LTQ54_19080 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_19085 PF07883 Cupin domain LTQ54_19085 PF01381 Helix-turn-helix LTQ54_19090 PF03594 Benzoate membrane transport protein LTQ54_19115 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_19115 PF00107 Zinc-binding dehydrogenase LTQ54_19140 PF00892 EamA-like transporter family LTQ54_19145 PF00128 Alpha amylase, catalytic domain LTQ54_19150 PF01494 FAD binding domain LTQ54_19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_19155 PF03466 LysR substrate binding domain LTQ54_19160 PF01554 MatE LTQ54_19190 PF00478 IMP dehydrogenase / GMP reductase domain LTQ54_19195 PF02223 Thymidylate kinase LTQ54_19215 PF08378 Nuclease-related domain LTQ54_19230 PF18500 CadC C-terminal domain 1 LTQ54_19230 PF00486 Transcriptional regulatory protein, C terminal LTQ54_19240 PF13417 Glutathione S-transferase, N-terminal domain LTQ54_19240 PF00043 Glutathione S-transferase, C-terminal domain LTQ54_19265 PF00892 EamA-like transporter family LTQ54_19270 PF08543 Phosphomethylpyrimidine kinase LTQ54_19275 PF00005 ABC transporter LTQ54_19280 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_19285 PF09084 NMT1/THI5 like LTQ54_19290 PF03070 TENA/THI-4/PQQC family LTQ54_19295 PF02110 Hydroxyethylthiazole kinase family LTQ54_19300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_19300 PF00672 HAMP domain LTQ54_19300 PF02743 Cache domain LTQ54_19305 PF02581 Thiamine monophosphate synthase LTQ54_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_19315 PF03466 LysR substrate binding domain LTQ54_19325 PF12833 Helix-turn-helix domain LTQ54_19325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_19330 PF01979 Amidohydrolase family LTQ54_19355 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_19365 PF13533 Biotin-lipoyl like LTQ54_19375 PF01594 AI-2E family transporter LTQ54_19405 PF01497 Periplasmic binding protein LTQ54_19410 PF01032 FecCD transport family LTQ54_19415 PF01032 FecCD transport family LTQ54_19420 PF00005 ABC transporter LTQ54_19425 PF00072 Response regulator receiver domain LTQ54_19430 PF00672 HAMP domain LTQ54_19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_19430 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_19430 PF01627 Hpt domain LTQ54_19430 PF00072 Response regulator receiver domain LTQ54_19430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_19435 PF03466 LysR substrate binding domain LTQ54_19440 PF07690 Major Facilitator Superfamily LTQ54_19445 PF05547 Immune inhibitor A peptidase M6 LTQ54_19445 PF00801 PKD domain LTQ54_19460 PF01037 Lrp/AsnC ligand binding domain LTQ54_19465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_19465 PF08447 PAS fold LTQ54_19470 PF00456 Transketolase, thiamine diphosphate binding domain LTQ54_19470 PF02780 Transketolase, C-terminal domain LTQ54_19470 PF02779 Transketolase, pyrimidine binding domain LTQ54_19475 PF00923 Transaldolase/Fructose-6-phosphate aldolase LTQ54_19485 PF00704 Glycosyl hydrolases family 18 LTQ54_19485 PF08329 Chitinase A, N-terminal domain LTQ54_19490 PF00360 Phytochrome region LTQ54_19490 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_19490 PF00563 EAL domain LTQ54_19490 PF01590 GAF domain LTQ54_19495 PF00581 Rhodanese-like domain LTQ54_19515 PF00899 ThiF family LTQ54_19520 PF03454 MoeA C-terminal region (domain IV) LTQ54_19520 PF03453 MoeA N-terminal region (domain I and II) LTQ54_19520 PF00994 Probable molybdopterin binding domain LTQ54_19525 PF01227 GTP cyclohydrolase I LTQ54_19530 PF03577 Peptidase family C69 LTQ54_19540 PF07152 YaeQ protein LTQ54_19545 PF00313 'Cold-shock' DNA-binding domain LTQ54_19550 PF07995 Glucose / Sorbosone dehydrogenase LTQ54_19555 PF07690 Major Facilitator Superfamily LTQ54_19560 PF00005 ABC transporter LTQ54_19570 PF12833 Helix-turn-helix domain LTQ54_19575 PF07715 TonB-dependent Receptor Plug Domain LTQ54_19575 PF00593 TonB dependent receptor LTQ54_19585 PF01032 FecCD transport family LTQ54_19590 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_19605 PF00155 Aminotransferase class I and II LTQ54_19610 PF06826 Predicted Permease Membrane Region LTQ54_19610 PF02080 TrkA-C domain LTQ54_19620 PF13533 Biotin-lipoyl like LTQ54_19625 PF00873 AcrB/AcrD/AcrF family LTQ54_19635 PF02253 Phospholipase A1 LTQ54_19640 PF18500 CadC C-terminal domain 1 LTQ54_19640 PF00486 Transcriptional regulatory protein, C terminal LTQ54_19650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_19650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_19655 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_19665 PF00664 ABC transporter transmembrane region LTQ54_19665 PF00005 ABC transporter LTQ54_19670 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_19690 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_19690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_19695 PF00873 AcrB/AcrD/AcrF family LTQ54_19725 PF03831 PhnA domain LTQ54_19725 PF08274 PhnA Zinc-Ribbon LTQ54_19745 PF12833 Helix-turn-helix domain LTQ54_19745 PF02311 AraC-like ligand binding domain LTQ54_19760 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_19765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LTQ54_19770 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_19775 PF00005 ABC transporter LTQ54_19780 PF00465 Iron-containing alcohol dehydrogenase LTQ54_19785 PF12833 Helix-turn-helix domain LTQ54_19785 PF06719 AraC-type transcriptional regulator N-terminus LTQ54_19795 PF01042 Endoribonuclease L-PSP LTQ54_19825 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_19825 PF12804 MobA-like NTP transferase domain LTQ54_19825 PF00132 Bacterial transferase hexapeptide (six repeats) LTQ54_19845 PF04224 Protein of unknown function, DUF417 LTQ54_19850 PF01042 Endoribonuclease L-PSP LTQ54_19855 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_19860 PF00704 Glycosyl hydrolases family 18 LTQ54_19860 PF06483 Chitinase C LTQ54_19865 PF07694 5TMR of 5TMR-LYT LTQ54_19865 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_19880 PF00768 D-alanyl-D-alanine carboxypeptidase LTQ54_19880 PF07943 Penicillin-binding protein 5, C-terminal domain LTQ54_19890 PF00849 RNA pseudouridylate synthase LTQ54_19900 PF00107 Zinc-binding dehydrogenase LTQ54_19900 PF16884 N-terminal domain of oxidoreductase LTQ54_19905 PF00440 Bacterial regulatory proteins, tetR family LTQ54_19905 PF16925 Tetracyclin repressor-like, C-terminal domain LTQ54_19910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LTQ54_19910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LTQ54_19920 PF00691 OmpA family LTQ54_19920 PF04972 BON domain LTQ54_19930 PF00158 Sigma-54 interaction domain LTQ54_19930 PF01590 GAF domain LTQ54_19935 PF00970 Oxidoreductase FAD-binding domain LTQ54_19935 PF00042 Globin LTQ54_19935 PF00175 Oxidoreductase NAD-binding domain LTQ54_19945 PF00654 Voltage gated chloride channel LTQ54_19950 PF02492 CobW/HypB/UreG, nucleotide-binding domain LTQ54_19950 PF07683 Cobalamin synthesis protein cobW C-terminal domain LTQ54_19955 PF00270 DEAD/DEAH box helicase LTQ54_19955 PF00271 Helicase conserved C-terminal domain LTQ54_19960 PF01810 LysE type translocator LTQ54_19985 PF00072 Response regulator receiver domain LTQ54_19985 PF00486 Transcriptional regulatory protein, C terminal LTQ54_19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_19990 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_20005 PF01037 Lrp/AsnC ligand binding domain LTQ54_20030 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_20035 PF00486 Transcriptional regulatory protein, C terminal LTQ54_20035 PF00072 Response regulator receiver domain LTQ54_20040 PF00873 AcrB/AcrD/AcrF family LTQ54_20050 PF02321 Outer membrane efflux protein LTQ54_20060 PF03264 NapC/NirT cytochrome c family, N-terminal region LTQ54_20065 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LTQ54_20070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_20070 PF00384 Molybdopterin oxidoreductase LTQ54_20070 PF01568 Molydopterin dinucleotide binding domain LTQ54_20080 PF00037 4Fe-4S binding domain LTQ54_20080 PF12800 4Fe-4S binding domain LTQ54_20080 PF13187 4Fe-4S dicluster domain LTQ54_20085 PF00672 HAMP domain LTQ54_20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_20085 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LTQ54_20085 PF07730 Histidine kinase LTQ54_20090 PF00196 Bacterial regulatory proteins, luxR family LTQ54_20090 PF00072 Response regulator receiver domain LTQ54_20095 PF03606 C4-dicarboxylate anaerobic carrier LTQ54_20110 PF12262 Bacterial virulence factor lipase N-terminal LTQ54_20115 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_20120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_20125 PF00873 AcrB/AcrD/AcrF family LTQ54_20145 PF00392 Bacterial regulatory proteins, gntR family LTQ54_20145 PF07702 UTRA domain LTQ54_20150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_20150 PF02378 Phosphotransferase system, EIIC LTQ54_20150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_20155 PF09261 Alpha mannosidase middle domain LTQ54_20155 PF07748 Glycosyl hydrolases family 38 C-terminal domain LTQ54_20155 PF01074 Glycosyl hydrolases family 38 N-terminal domain LTQ54_20160 PF02595 Glycerate kinase family LTQ54_20165 PF01238 Phosphomannose isomerase type I LTQ54_20190 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20190 PF05230 MASE2 domain LTQ54_20195 PF01926 50S ribosome-binding GTPase LTQ54_20200 PF00034 Cytochrome c LTQ54_20205 PF00196 Bacterial regulatory proteins, luxR family LTQ54_20240 PF01212 Beta-eliminating lyase LTQ54_20245 PF00293 NUDIX domain LTQ54_20250 PF12592 Protein of unknown function (DUF3763) LTQ54_20250 PF07728 AAA domain (dynein-related subfamily) LTQ54_20250 PF17868 AAA lid domain LTQ54_20255 PF05762 VWA domain containing CoxE-like protein LTQ54_20280 PF00672 HAMP domain LTQ54_20280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_20315 PF04393 Protein of unknown function (DUF535) LTQ54_20330 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_20335 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_20370 PF04542 Sigma-70 region 2 LTQ54_20370 PF08281 Sigma-70, region 4 LTQ54_20380 PF03150 Di-haem cytochrome c peroxidase LTQ54_20385 PF03150 Di-haem cytochrome c peroxidase LTQ54_20385 PF00034 Cytochrome c LTQ54_20395 PF18465 Rieske 3Fe-4S LTQ54_20395 PF00384 Molybdopterin oxidoreductase LTQ54_20395 PF01568 Molydopterin dinucleotide binding domain LTQ54_20410 PF04324 BFD-like [2Fe-2S] binding domain LTQ54_20410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_20410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_20410 PF18267 Rubredoxin NAD+ reductase C-terminal domain LTQ54_20410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_20415 PF13806 Rieske-like [2Fe-2S] domain LTQ54_20420 PF01226 Formate/nitrite transporter LTQ54_20425 PF10414 Sirohaem synthase dimerisation region LTQ54_20425 PF14824 Sirohaem biosynthesis protein central LTQ54_20425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LTQ54_20440 PF00072 Response regulator receiver domain LTQ54_20440 PF00486 Transcriptional regulatory protein, C terminal LTQ54_20445 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_20445 PF00672 HAMP domain LTQ54_20445 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_20450 PF00375 Sodium:dicarboxylate symporter family LTQ54_20455 PF07715 TonB-dependent Receptor Plug Domain LTQ54_20455 PF00593 TonB dependent receptor LTQ54_20465 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_20470 PF01618 MotA/TolQ/ExbB proton channel family LTQ54_20475 PF02472 Biopolymer transport protein ExbD/TolR LTQ54_20520 PF01297 Zinc-uptake complex component A periplasmic LTQ54_20525 PF00005 ABC transporter LTQ54_20530 PF00950 ABC 3 transport family LTQ54_20550 PF11756 Nitrous oxide-stimulated promoter LTQ54_20555 PF01554 MatE LTQ54_20575 PF07690 Major Facilitator Superfamily LTQ54_20580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_20580 PF12833 Helix-turn-helix domain LTQ54_20585 PF13193 AMP-binding enzyme C-terminal domain LTQ54_20585 PF00501 AMP-binding enzyme LTQ54_20590 PF05199 GMC oxidoreductase LTQ54_20590 PF00732 GMC oxidoreductase LTQ54_20595 PF00085 Thioredoxin LTQ54_20600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LTQ54_20600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LTQ54_20615 PF04143 Sulphur transport LTQ54_20630 PF13597 Anaerobic ribonucleoside-triphosphate reductase LTQ54_20630 PF03477 ATP cone domain LTQ54_20640 PF00155 Aminotransferase class I and II LTQ54_20645 PF08443 RimK-like ATP-grasp domain LTQ54_20645 PF18030 RimK PreATP-grasp domain LTQ54_20650 PF12848 ABC transporter LTQ54_20650 PF00005 ABC transporter LTQ54_20665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LTQ54_20665 PF07685 CobB/CobQ-like glutamine amidotransferase domain LTQ54_20675 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_20680 PF03459 TOBE domain LTQ54_20680 PF00005 ABC transporter LTQ54_20690 PF01590 GAF domain LTQ54_20690 PF00563 EAL domain LTQ54_20690 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20690 PF00360 Phytochrome region LTQ54_20700 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20700 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_20715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LTQ54_20715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LTQ54_20715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LTQ54_20720 PF02233 NAD(P) transhydrogenase beta subunit LTQ54_20730 PF00486 Transcriptional regulatory protein, C terminal LTQ54_20730 PF00072 Response regulator receiver domain LTQ54_20745 PF03701 Uncharacterised protein family (UPF0181) LTQ54_20750 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20750 PF08448 PAS fold LTQ54_20775 PF01253 Translation initiation factor SUI1 LTQ54_20790 PF07478 D-ala D-ala ligase C-terminus LTQ54_20790 PF01820 D-ala D-ala ligase N-terminus LTQ54_20795 PF05036 Sporulation related domain LTQ54_20800 PF00583 Acetyltransferase (GNAT) family LTQ54_20800 PF13380 CoA binding domain LTQ54_20800 PF13607 Succinyl-CoA ligase like flavodoxin domain LTQ54_20805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_20805 PF03466 LysR substrate binding domain LTQ54_20810 PF04886 PT repeat LTQ54_20810 PF00593 TonB dependent receptor LTQ54_20810 PF07715 TonB-dependent Receptor Plug Domain LTQ54_20815 PF16363 GDP-mannose 4,6 dehydratase LTQ54_20820 PF03707 Bacterial signalling protein N terminal repeat LTQ54_20820 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20820 PF00563 EAL domain LTQ54_20835 PF03746 LamB/YcsF family LTQ54_20840 PF02682 Carboxyltransferase domain, subdomain C and D LTQ54_20845 PF02626 Carboxyltransferase domain, subdomain A and B LTQ54_20860 PF00005 ABC transporter LTQ54_20865 PF13472 GDSL-like Lipase/Acylhydrolase family LTQ54_20870 PF07055 Enoyl reductase FAD binding domain LTQ54_20870 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LTQ54_20870 PF12241 Trans-2-enoyl-CoA reductase catalytic region LTQ54_20875 PF00563 EAL domain LTQ54_20875 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_20875 PF00498 FHA domain LTQ54_20885 PF03717 Penicillin-binding Protein dimerisation domain LTQ54_20885 PF00905 Penicillin binding protein transpeptidase domain LTQ54_20890 PF00684 DnaJ central domain LTQ54_20890 PF00226 DnaJ domain LTQ54_20890 PF01556 DnaJ C terminal domain LTQ54_20910 PF00892 EamA-like transporter family LTQ54_20915 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_20915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_20925 PF03061 Thioesterase superfamily LTQ54_20930 PF01435 Peptidase family M48 LTQ54_20940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LTQ54_20945 PF12262 Bacterial virulence factor lipase N-terminal LTQ54_20960 PF03466 LysR substrate binding domain LTQ54_20960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_20975 PF08543 Phosphomethylpyrimidine kinase LTQ54_20980 PF00155 Aminotransferase class I and II LTQ54_20985 PF06826 Predicted Permease Membrane Region LTQ54_20985 PF02080 TrkA-C domain LTQ54_20995 PF13533 Biotin-lipoyl like LTQ54_21010 PF00135 Carboxylesterase family LTQ54_21015 PF13091 PLD-like domain LTQ54_21020 PF01177 Asp/Glu/Hydantoin racemase LTQ54_21030 PF00270 DEAD/DEAH box helicase LTQ54_21030 PF00271 Helicase conserved C-terminal domain LTQ54_21045 PF03741 Integral membrane protein TerC family LTQ54_21050 PF00149 Calcineurin-like phosphoesterase LTQ54_21050 PF02872 5'-nucleotidase, C-terminal domain LTQ54_21055 PF11398 Protein of unknown function (DUF2813) LTQ54_21060 PF06496 Protein of unknown function (DUF1097) LTQ54_21065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21065 PF03466 LysR substrate binding domain LTQ54_21070 PF01226 Formate/nitrite transporter LTQ54_21075 PF04264 YceI-like domain LTQ54_21080 PF01292 Prokaryotic cytochrome b561 LTQ54_21095 PF00563 EAL domain LTQ54_21095 PF12792 CSS motif domain associated with EAL LTQ54_21100 PF00873 AcrB/AcrD/AcrF family LTQ54_21105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_21105 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_21110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_21110 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_21120 PF00271 Helicase conserved C-terminal domain LTQ54_21120 PF00270 DEAD/DEAH box helicase LTQ54_21125 PF04336 Acyl carrier protein phosphodiesterase LTQ54_21130 PF03222 Tryptophan/tyrosine permease family LTQ54_21135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_21140 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_21145 PF11849 Domain of unknown function (DUF3369) LTQ54_21160 PF00294 pfkB family carbohydrate kinase LTQ54_21165 PF01268 Formate--tetrahydrofolate ligase LTQ54_21170 PF17158 Membrane-associated sensor, integral membrane domain LTQ54_21170 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_21175 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_21180 PF00472 RF-1 domain LTQ54_21200 PF01571 Aminomethyltransferase folate-binding domain LTQ54_21200 PF08669 Glycine cleavage T-protein C-terminal barrel domain LTQ54_21210 PF00464 Serine hydroxymethyltransferase LTQ54_21215 PF01597 Glycine cleavage H-protein LTQ54_21220 PF02347 Glycine cleavage system P-protein LTQ54_21235 PF01554 MatE LTQ54_21245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_21245 PF00672 HAMP domain LTQ54_21245 PF02743 Cache domain LTQ54_21250 PF03466 LysR substrate binding domain LTQ54_21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21260 PF01810 LysE type translocator LTQ54_21275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_21280 PF03413 Peptidase propeptide and YPEB domain LTQ54_21280 PF01447 Thermolysin metallopeptidase, catalytic domain LTQ54_21280 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_21280 PF02868 Thermolysin metallopeptidase, alpha-helical domain LTQ54_21280 PF07504 Fungalysin/Thermolysin Propeptide Motif LTQ54_21290 PF00579 tRNA synthetases class I (W and Y) LTQ54_21300 PF00291 Pyridoxal-phosphate dependent enzyme LTQ54_21305 PF07690 Major Facilitator Superfamily LTQ54_21315 PF01161 Phosphatidylethanolamine-binding protein LTQ54_21320 PF00989 PAS fold LTQ54_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21320 PF00672 HAMP domain LTQ54_21320 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_21325 PF00072 Response regulator receiver domain LTQ54_21325 PF00486 Transcriptional regulatory protein, C terminal LTQ54_21340 PF03466 LysR substrate binding domain LTQ54_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21345 PF13533 Biotin-lipoyl like LTQ54_21350 PF07690 Major Facilitator Superfamily LTQ54_21365 PF04542 Sigma-70 region 2 LTQ54_21365 PF04545 Sigma-70, region 4 LTQ54_21365 PF04539 Sigma-70 region 3 LTQ54_21365 PF00140 Sigma-70 factor, region 1.2 LTQ54_21385 PF13533 Biotin-lipoyl like LTQ54_21390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21390 PF00072 Response regulator receiver domain LTQ54_21395 PF02321 Outer membrane efflux protein LTQ54_21400 PF00005 ABC transporter LTQ54_21400 PF00664 ABC transporter transmembrane region LTQ54_21405 PF00005 ABC transporter LTQ54_21415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_21415 PF00072 Response regulator receiver domain LTQ54_21415 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_21415 PF00672 HAMP domain LTQ54_21415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21415 PF01627 Hpt domain LTQ54_21440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_21440 PF00672 HAMP domain LTQ54_21455 PF13186 Iron-sulfur cluster-binding domain LTQ54_21455 PF04055 Radical SAM superfamily LTQ54_21460 PF03781 Sulfatase-modifying factor enzyme 1 LTQ54_21470 PF13407 Periplasmic binding protein domain LTQ54_21480 PF00563 EAL domain LTQ54_21480 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_21480 PF03707 Bacterial signalling protein N terminal repeat LTQ54_21485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21485 PF03466 LysR substrate binding domain LTQ54_21500 PF13519 von Willebrand factor type A domain LTQ54_21515 PF07726 ATPase family associated with various cellular activities (AAA) LTQ54_21515 PF17863 AAA lid domain LTQ54_21525 PF00884 Sulfatase LTQ54_21530 PF00884 Sulfatase LTQ54_21535 PF03150 Di-haem cytochrome c peroxidase LTQ54_21535 PF00034 Cytochrome c LTQ54_21545 PF01609 Transposase DDE domain LTQ54_21545 PF13006 Insertion element 4 transposase N-terminal LTQ54_21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21550 PF09308 LuxQ, periplasmic LTQ54_21550 PF00072 Response regulator receiver domain LTQ54_21550 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_21560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LTQ54_21575 PF00962 Adenosine/AMP deaminase LTQ54_21580 PF00196 Bacterial regulatory proteins, luxR family LTQ54_21580 PF00072 Response regulator receiver domain LTQ54_21595 PF02469 Fasciclin domain LTQ54_21625 PF02567 Phenazine biosynthesis-like protein LTQ54_21630 PF01810 LysE type translocator LTQ54_21640 PF00563 EAL domain LTQ54_21640 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_21640 PF03707 Bacterial signalling protein N terminal repeat LTQ54_21660 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_21670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_21670 PF00034 Cytochrome c LTQ54_21685 PF00561 alpha/beta hydrolase fold LTQ54_21700 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_21710 PF00171 Aldehyde dehydrogenase family LTQ54_21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21720 PF03466 LysR substrate binding domain LTQ54_21730 PF00119 ATP synthase A chain LTQ54_21735 PF00137 ATP synthase subunit C LTQ54_21740 PF00430 ATP synthase B/B' CF(0) LTQ54_21745 PF00213 ATP synthase delta (OSCP) subunit LTQ54_21750 PF00306 ATP synthase alpha/beta chain, C terminal domain LTQ54_21750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_21750 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_21755 PF00231 ATP synthase LTQ54_21760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LTQ54_21760 PF02874 ATP synthase alpha/beta family, beta-barrel domain LTQ54_21765 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LTQ54_21765 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LTQ54_21775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21775 PF03466 LysR substrate binding domain LTQ54_21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21785 PF09456 RcsC Alpha-Beta-Loop (ABL) LTQ54_21785 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_21785 PF00072 Response regulator receiver domain LTQ54_21790 PF00072 Response regulator receiver domain LTQ54_21790 PF00486 Transcriptional regulatory protein, C terminal LTQ54_21805 PF00005 ABC transporter LTQ54_21805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_21810 PF00005 ABC transporter LTQ54_21810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_21815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_21820 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_21820 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_21825 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_21830 PF00005 ABC transporter LTQ54_21830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LTQ54_21835 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_21835 PF12911 N-terminal TM domain of oligopeptide transport permease C LTQ54_21840 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_21845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_21865 PF05025 RbsD / FucU transport protein family LTQ54_21870 PF00005 ABC transporter LTQ54_21875 PF02653 Branched-chain amino acid transport system / permease component LTQ54_21880 PF13407 Periplasmic binding protein domain LTQ54_21885 PF00294 pfkB family carbohydrate kinase LTQ54_21890 PF00356 Bacterial regulatory proteins, lacI family LTQ54_21895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_21895 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_21895 PF09308 LuxQ, periplasmic LTQ54_21895 PF00072 Response regulator receiver domain LTQ54_21915 PF03707 Bacterial signalling protein N terminal repeat LTQ54_21915 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_21915 PF00563 EAL domain LTQ54_21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_21920 PF03466 LysR substrate binding domain LTQ54_21965 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LTQ54_21990 PF01548 Transposase LTQ54_21990 PF02371 Transposase IS116/IS110/IS902 family LTQ54_22010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_22010 PF00384 Molybdopterin oxidoreductase LTQ54_22010 PF01568 Molydopterin dinucleotide binding domain LTQ54_22015 PF18267 Rubredoxin NAD+ reductase C-terminal domain LTQ54_22015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_22015 PF04324 BFD-like [2Fe-2S] binding domain LTQ54_22015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LTQ54_22015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LTQ54_22025 PF07690 Major Facilitator Superfamily LTQ54_22030 PF03793 PASTA domain LTQ54_22030 PF00069 Protein kinase domain LTQ54_22035 PF00356 Bacterial regulatory proteins, lacI family LTQ54_22035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_22040 PF00381 PTS HPr component phosphorylation site LTQ54_22040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_22045 PF00294 pfkB family carbohydrate kinase LTQ54_22050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_22050 PF02378 Phosphotransferase system, EIIC LTQ54_22060 PF00873 AcrB/AcrD/AcrF family LTQ54_22080 PF04116 Fatty acid hydroxylase superfamily LTQ54_22085 PF00072 Response regulator receiver domain LTQ54_22085 PF00486 Transcriptional regulatory protein, C terminal LTQ54_22105 PF02798 Glutathione S-transferase, N-terminal domain LTQ54_22110 PF01844 HNH endonuclease LTQ54_22120 PF07690 Major Facilitator Superfamily LTQ54_22125 PF18081 Fanconi anemia-associated nuclease SAP domain LTQ54_22125 PF08774 VRR-NUC domain LTQ54_22155 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_22155 PF00672 HAMP domain LTQ54_22155 PF17149 Periplasmic sensor domain found in signal transduction proteins LTQ54_22155 PF00072 Response regulator receiver domain LTQ54_22155 PF01627 Hpt domain LTQ54_22165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_22170 PF02142 MGS-like domain LTQ54_22180 PF00580 UvrD/REP helicase N-terminal domain LTQ54_22180 PF13361 UvrD-like helicase C-terminal domain LTQ54_22180 PF12462 DNA helicase IV / RNA helicase N terminal LTQ54_22185 PF12805 FUSC-like inner membrane protein yccS LTQ54_22205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_22205 PF03466 LysR substrate binding domain LTQ54_22210 PF04055 Radical SAM superfamily LTQ54_22215 PF11230 Protein of unknown function (DUF3029) LTQ54_22225 PF03466 LysR substrate binding domain LTQ54_22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_22240 PF00892 EamA-like transporter family LTQ54_22245 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_22255 PF00465 Iron-containing alcohol dehydrogenase LTQ54_22275 PF02525 Flavodoxin-like fold LTQ54_22280 PF00999 Sodium/hydrogen exchanger family LTQ54_22280 PF02254 TrkA-N domain LTQ54_22300 PF13817 IS66 C-terminal element LTQ54_22300 PF13007 Transposase C of IS166 homeodomain LTQ54_22300 PF13005 zinc-finger binding domain of transposase IS66 LTQ54_22300 PF03050 Transposase IS66 family LTQ54_22325 PF03793 PASTA domain LTQ54_22325 PF00069 Protein kinase domain LTQ54_22335 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LTQ54_22370 PF08240 Alcohol dehydrogenase GroES-like domain LTQ54_22370 PF00107 Zinc-binding dehydrogenase LTQ54_22375 PF00155 Aminotransferase class I and II LTQ54_22380 PF00563 EAL domain LTQ54_22380 PF17153 Periplasmic sensor domain, extracellular LTQ54_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_22395 PF03466 LysR substrate binding domain LTQ54_22400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTQ54_22425 PF01966 HD domain LTQ54_22435 PF03466 LysR substrate binding domain LTQ54_22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_22440 PF01906 Putative heavy-metal-binding LTQ54_22445 PF08525 Opacity-associated protein A N-terminal motif LTQ54_22445 PF01476 LysM domain LTQ54_22445 PF01551 Peptidase family M23 LTQ54_22470 PF00005 ABC transporter LTQ54_22470 PF00664 ABC transporter transmembrane region LTQ54_22475 PF00664 ABC transporter transmembrane region LTQ54_22475 PF00005 ABC transporter LTQ54_22480 PF00133 tRNA synthetases class I (I, L, M and V) LTQ54_22480 PF08264 Anticodon-binding domain of tRNA LTQ54_22500 PF03315 Serine dehydratase beta chain LTQ54_22500 PF03313 Serine dehydratase alpha chain LTQ54_22505 PF00854 POT family LTQ54_22510 PF04954 Siderophore-interacting protein LTQ54_22510 PF08021 Siderophore-interacting FAD-binding domain LTQ54_22515 PF00356 Bacterial regulatory proteins, lacI family LTQ54_22515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LTQ54_22520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LTQ54_22520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LTQ54_22525 PF01202 Shikimate kinase LTQ54_22530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LTQ54_22540 PF03480 Bacterial extracellular solute-binding protein, family 7 LTQ54_22550 PF07702 UTRA domain LTQ54_22550 PF00392 Bacterial regulatory proteins, gntR family LTQ54_22555 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_22560 PF00005 ABC transporter LTQ54_22565 PF01266 FAD dependent oxidoreductase LTQ54_22575 PF00266 Aminotransferase class-V LTQ54_22580 PF00202 Aminotransferase class-III LTQ54_22585 PF13419 Haloacid dehalogenase-like hydrolase LTQ54_22590 PF13488 Glycine zipper LTQ54_22590 PF00691 OmpA family LTQ54_22595 PF02566 OsmC-like protein LTQ54_22600 PF01625 Peptide methionine sulfoxide reductase LTQ54_22600 PF01641 SelR domain LTQ54_22605 PF02386 Cation transport protein LTQ54_22610 PF02080 TrkA-C domain LTQ54_22610 PF02254 TrkA-N domain LTQ54_22615 PF00924 Mechanosensitive ion channel LTQ54_22620 PF00483 Nucleotidyl transferase LTQ54_22620 PF01050 Mannose-6-phosphate isomerase LTQ54_22625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_22625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_22625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_22625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_22630 PF00793 DAHP synthetase I family LTQ54_22635 PF12843 Putative quorum-sensing-regulated virulence factor LTQ54_22645 PF18416 N-acetylglucosamine binding protein domain 2 LTQ54_22645 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LTQ54_22650 PF01040 UbiA prenyltransferase family LTQ54_22655 PF02628 Cytochrome oxidase assembly protein LTQ54_22675 PF00510 Cytochrome c oxidase subunit III LTQ54_22680 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LTQ54_22685 PF00115 Cytochrome C and Quinol oxidase polypeptide I LTQ54_22690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LTQ54_22690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LTQ54_22695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LTQ54_22695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LTQ54_22695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LTQ54_22695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LTQ54_22700 PF01810 LysE type translocator LTQ54_22705 PF01557 Fumarylacetoacetate (FAA) hydrolase family LTQ54_22715 PF00012 Hsp70 protein LTQ54_22735 PF09308 LuxQ, periplasmic LTQ54_22735 PF00072 Response regulator receiver domain LTQ54_22735 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_22735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_22740 PF13407 Periplasmic binding protein domain LTQ54_22745 PF01541 GIY-YIG catalytic domain LTQ54_22750 PF04337 Protein of unknown function, DUF480 LTQ54_22760 PF04363 Protein of unknown function (DUF496) LTQ54_22775 PF00672 HAMP domain LTQ54_22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_22775 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_22775 PF01627 Hpt domain LTQ54_22775 PF00072 Response regulator receiver domain LTQ54_22775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LTQ54_22780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LTQ54_22780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LTQ54_22785 PF00175 Oxidoreductase NAD-binding domain LTQ54_22785 PF00970 Oxidoreductase FAD-binding domain LTQ54_22785 PF00111 2Fe-2S iron-sulfur cluster binding domain LTQ54_22790 PF03063 Prismane/CO dehydrogenase family LTQ54_22805 PF01810 LysE type translocator LTQ54_22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_22810 PF03466 LysR substrate binding domain LTQ54_22820 PF13520 Amino acid permease LTQ54_22825 PF00155 Aminotransferase class I and II LTQ54_22825 PF00392 Bacterial regulatory proteins, gntR family LTQ54_22835 PF03253 Urea transporter LTQ54_22840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LTQ54_22840 PF12833 Helix-turn-helix domain LTQ54_22855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LTQ54_22860 PF07969 Amidohydrolase family LTQ54_22865 PF00313 'Cold-shock' DNA-binding domain LTQ54_22870 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_22885 PF00271 Helicase conserved C-terminal domain LTQ54_22885 PF00270 DEAD/DEAH box helicase LTQ54_22890 PF00563 EAL domain LTQ54_22890 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_22890 PF03707 Bacterial signalling protein N terminal repeat LTQ54_22905 PF00672 HAMP domain LTQ54_22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_22905 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_22910 PF00072 Response regulator receiver domain LTQ54_22910 PF00486 Transcriptional regulatory protein, C terminal LTQ54_22915 PF00873 AcrB/AcrD/AcrF family LTQ54_22925 PF02321 Outer membrane efflux protein LTQ54_22935 PF07670 Nucleoside recognition LTQ54_22935 PF07662 Na+ dependent nucleoside transporter C-terminus LTQ54_22935 PF01773 Na+ dependent nucleoside transporter N-terminus LTQ54_22945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LTQ54_22950 PF03611 PTS system sugar-specific permease component LTQ54_22955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_22960 PF01966 HD domain LTQ54_22965 PF13302 Acetyltransferase (GNAT) domain LTQ54_22970 PF16527 Two-component sensor protein CpxA, periplasmic domain LTQ54_22970 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_22970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_22970 PF00672 HAMP domain LTQ54_22975 PF00072 Response regulator receiver domain LTQ54_22975 PF00486 Transcriptional regulatory protein, C terminal LTQ54_22980 PF13426 PAS domain LTQ54_22980 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_22980 PF00563 EAL domain LTQ54_22990 PF08447 PAS fold LTQ54_22990 PF08448 PAS fold LTQ54_22990 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_22990 PF00563 EAL domain LTQ54_23000 PF00005 ABC transporter LTQ54_23020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LTQ54_23020 PF01872 RibD C-terminal domain LTQ54_23030 PF00849 RNA pseudouridylate synthase LTQ54_23040 PF07690 Major Facilitator Superfamily LTQ54_23050 PF12833 Helix-turn-helix domain LTQ54_23055 PF02311 AraC-like ligand binding domain LTQ54_23055 PF12833 Helix-turn-helix domain LTQ54_23070 PF01274 Malate synthase LTQ54_23075 PF03466 LysR substrate binding domain LTQ54_23075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23080 PF00463 Isocitrate lyase family LTQ54_23095 PF01752 Collagenase LTQ54_23095 PF08453 Peptidase family M9 N-terminal LTQ54_23095 PF04151 Bacterial pre-peptidase C-terminal domain LTQ54_23100 PF17327 Acyl homoserine lactone synthase LTQ54_23105 PF00072 Response regulator receiver domain LTQ54_23105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23110 PF03466 LysR substrate binding domain LTQ54_23150 PF00072 Response regulator receiver domain LTQ54_23150 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_23165 PF01032 FecCD transport family LTQ54_23175 PF00005 ABC transporter LTQ54_23180 PF00149 Calcineurin-like phosphoesterase LTQ54_23180 PF02872 5'-nucleotidase, C-terminal domain LTQ54_23185 PF00465 Iron-containing alcohol dehydrogenase LTQ54_23190 PF00596 Class II Aldolase and Adducin N-terminal domain LTQ54_23195 PF05025 RbsD / FucU transport protein family LTQ54_23200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LTQ54_23200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LTQ54_23205 PF02952 L-fucose isomerase, C-terminal domain LTQ54_23205 PF07881 L-fucose isomerase, first N-terminal domain LTQ54_23205 PF07882 L-fucose isomerase, second N-terminal domain LTQ54_23210 PF07690 Major Facilitator Superfamily LTQ54_23215 PF00455 DeoR C terminal sensor domain LTQ54_23215 PF08220 DeoR-like helix-turn-helix domain LTQ54_23220 PF00005 ABC transporter LTQ54_23225 PF12704 MacB-like periplasmic core domain LTQ54_23225 PF02687 FtsX-like permease family LTQ54_23235 PF04231 Endonuclease I LTQ54_23245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23245 PF03466 LysR substrate binding domain LTQ54_23260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_23275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LTQ54_23275 PF12793 Sugar transport-related sRNA regulator N-term LTQ54_23285 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_23290 PF14785 Maltose transport system permease protein MalF P2 domain LTQ54_23290 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_23295 PF01547 Bacterial extracellular solute-binding protein LTQ54_23300 PF08402 TOBE domain LTQ54_23300 PF00005 ABC transporter LTQ54_23310 PF02743 Cache domain LTQ54_23310 PF00672 HAMP domain LTQ54_23310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_23315 PF17863 AAA lid domain LTQ54_23315 PF07726 ATPase family associated with various cellular activities (AAA) LTQ54_23320 PF01882 Protein of unknown function DUF58 LTQ54_23330 PF07584 Aerotolerance regulator N-terminal LTQ54_23330 PF00092 von Willebrand factor type A domain LTQ54_23335 PF07584 Aerotolerance regulator N-terminal LTQ54_23335 PF00092 von Willebrand factor type A domain LTQ54_23345 PF17151 Periplasmic sensor domain LTQ54_23345 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_23350 PF00005 ABC transporter LTQ54_23355 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_23360 PF00528 Binding-protein-dependent transport system inner membrane component LTQ54_23365 PF12849 PBP superfamily domain LTQ54_23370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LTQ54_23370 PF17200 Single Cache domain 2 LTQ54_23370 PF00672 HAMP domain LTQ54_23390 PF07715 TonB-dependent Receptor Plug Domain LTQ54_23390 PF00593 TonB dependent receptor LTQ54_23395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LTQ54_23395 PF00326 Prolyl oligopeptidase family LTQ54_23400 PF03280 Proteobacterial lipase chaperone protein LTQ54_23405 PF00561 alpha/beta hydrolase fold LTQ54_23410 PF00657 GDSL-like Lipase/Acylhydrolase LTQ54_23415 PF00271 Helicase conserved C-terminal domain LTQ54_23415 PF00270 DEAD/DEAH box helicase LTQ54_23425 PF17969 L,D-transpeptidase C-terminal domain LTQ54_23425 PF03734 L,D-transpeptidase catalytic domain LTQ54_23425 PF01476 LysM domain LTQ54_23430 PF01048 Phosphorylase superfamily LTQ54_23445 PF00990 Diguanylate cyclase, GGDEF domain LTQ54_23455 PF11742 Protein of unknown function (DUF3302) LTQ54_23460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LTQ54_23460 PF00529 HlyD membrane-fusion protein of T1SS LTQ54_23465 PF07155 ECF-type riboflavin transporter, S component LTQ54_23470 PF12558 ATP-binding cassette cobalt transporter LTQ54_23470 PF00005 ABC transporter LTQ54_23485 PF02806 Alpha amylase, C-terminal all-beta domain LTQ54_23485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_23485 PF00128 Alpha amylase, catalytic domain LTQ54_23490 PF02446 4-alpha-glucanotransferase LTQ54_23495 PF00343 Carbohydrate phosphorylase LTQ54_23500 PF17874 MalT-like TPR region LTQ54_23500 PF00196 Bacterial regulatory proteins, luxR family LTQ54_23515 PF02630 SCO1/SenC LTQ54_23525 PF03193 RsgA GTPase LTQ54_23530 PF00375 Sodium:dicarboxylate symporter family LTQ54_23540 PF00196 Bacterial regulatory proteins, luxR family LTQ54_23540 PF00072 Response regulator receiver domain LTQ54_23545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LTQ54_23545 PF00512 His Kinase A (phospho-acceptor) domain LTQ54_23550 PF13247 4Fe-4S dicluster domain LTQ54_23555 PF03916 Polysulphide reductase, NrfD LTQ54_23560 PF01568 Molydopterin dinucleotide binding domain LTQ54_23560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LTQ54_23560 PF00384 Molybdopterin oxidoreductase LTQ54_23570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LTQ54_23575 PF02028 BCCT, betaine/carnitine/choline family transporter LTQ54_23580 PF13378 Enolase C-terminal domain-like LTQ54_23580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LTQ54_23585 PF00890 FAD binding domain LTQ54_23585 PF04205 FMN-binding domain LTQ54_23590 PF00392 Bacterial regulatory proteins, gntR family LTQ54_23590 PF07729 FCD domain LTQ54_23595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23595 PF03466 LysR substrate binding domain LTQ54_23600 PF01037 Lrp/AsnC ligand binding domain LTQ54_23605 PF01810 LysE type translocator LTQ54_23615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_23615 PF17999 Pullulanase N1-terminal domain LTQ54_23615 PF00128 Alpha amylase, catalytic domain LTQ54_23620 PF17967 Pullulanase N2 domain LTQ54_23620 PF18494 Pullulanase Ins domain LTQ54_23620 PF03714 Bacterial pullanase-associated domain LTQ54_23620 PF11852 Domain of unknown function (DUF3372) LTQ54_23620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_23630 PF02264 LamB porin LTQ54_23635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LTQ54_23635 PF00128 Alpha amylase, catalytic domain LTQ54_23650 PF01553 Acyltransferase LTQ54_23655 PF00970 Oxidoreductase FAD-binding domain LTQ54_23655 PF00175 Oxidoreductase NAD-binding domain LTQ54_23665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LTQ54_23665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LTQ54_23670 PF01734 Patatin-like phospholipase LTQ54_23675 PF00199 Catalase LTQ54_23675 PF06628 Catalase-related immune-responsive LTQ54_23680 PF02595 Glycerate kinase family LTQ54_23690 PF01261 Xylose isomerase-like TIM barrel LTQ54_23695 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LTQ54_23705 PF00596 Class II Aldolase and Adducin N-terminal domain LTQ54_23710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LTQ54_23715 PF03611 PTS system sugar-specific permease component LTQ54_23720 PF08220 DeoR-like helix-turn-helix domain LTQ54_23720 PF00455 DeoR C terminal sensor domain LTQ54_23745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LTQ54_23745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LTQ54_23755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23755 PF03466 LysR substrate binding domain LTQ54_23780 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LTQ54_23780 PF00535 Glycosyl transferase family 2 LTQ54_23785 PF01852 START domain LTQ54_23790 PF00440 Bacterial regulatory proteins, tetR family LTQ54_23805 PF01758 Sodium Bile acid symporter family LTQ54_23810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23810 PF03466 LysR substrate binding domain LTQ54_23820 PF07634 RtxA repeat LTQ54_23820 PF16671 Actin cross-linking domain LTQ54_23820 PF12146 Serine aminopeptidase, S33 LTQ54_23820 PF11647 Membrane Localization Domain LTQ54_23820 PF11713 Peptidase C80 family LTQ54_23825 PF02794 RTX toxin acyltransferase family LTQ54_23835 PF03412 Peptidase C39 family LTQ54_23835 PF00005 ABC transporter LTQ54_23835 PF00664 ABC transporter transmembrane region LTQ54_23845 PF03412 Peptidase C39 family LTQ54_23845 PF00005 ABC transporter LTQ54_23845 PF00664 ABC transporter transmembrane region LTQ54_23850 PF00230 Major intrinsic protein LTQ54_23855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LTQ54_23855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LTQ54_23860 PF08220 DeoR-like helix-turn-helix domain LTQ54_23860 PF00455 DeoR C terminal sensor domain LTQ54_23865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LTQ54_23865 PF01266 FAD dependent oxidoreductase LTQ54_23870 PF00106 short chain dehydrogenase LTQ54_23875 PF03466 LysR substrate binding domain LTQ54_23875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23885 PF01177 Asp/Glu/Hydantoin racemase LTQ54_23895 PF07992 Pyridine nucleotide-disulphide oxidoreductase LTQ54_23895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LTQ54_23900 PF00881 Nitroreductase family LTQ54_23905 PF13091 PLD-like domain LTQ54_23920 PF03466 LysR substrate binding domain LTQ54_23920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23925 PF07690 Major Facilitator Superfamily LTQ54_23930 PF12464 Maltose acetyltransferase LTQ54_23930 PF14602 Hexapeptide repeat of succinyl-transferase LTQ54_23935 PF00356 Bacterial regulatory proteins, lacI family LTQ54_23940 PF00232 Glycosyl hydrolase family 1 LTQ54_23975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23975 PF03466 LysR substrate binding domain LTQ54_23980 PF14864 Alkyl sulfatase C-terminal LTQ54_23980 PF14863 Alkyl sulfatase dimerisation LTQ54_23980 PF00753 Metallo-beta-lactamase superfamily LTQ54_23985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LTQ54_23985 PF03466 LysR substrate binding domain LTQ54_23990 PF01554 MatE LTQ54_23995 PF00378 Enoyl-CoA hydratase/isomerase LTQ54_24000 PF00106 short chain dehydrogenase LTQ54_24020 PF01980 tRNA-methyltransferase O